Clone Name | bart11b12 |
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Clone Library Name | barley_pub |
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 88.2 bits (217), Expect = 2e-17 Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 1/86 (1%) Frame = +3 Query: 201 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 377 +C+ K + +Q A+D+ACG G DC+ + C++P VVAH +YA N+YYQK Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419 Query: 378 MGATCDFMGVATLTGADPSAGSCKYP 455 +CDF GVAT+T DPS G+C +P Sbjct: 420 ASGSCDFKGVATVTTTDPSRGTCVFP 445
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 87.4 bits (215), Expect = 3e-17 Identities = 41/84 (48%), Positives = 48/84 (57%) Frame = +3 Query: 201 YCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGM 380 +CV K AN +Q I+YACG DC I S G CF P S+ AH SY N+YYQ N Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435 Query: 381 GATCDFMGVATLTGADPSAGSCKY 452 CDF G +T +DPS G CKY Sbjct: 436 DLACDFKGTGIVTSSDPSYGGCKY 459
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 86.3 bits (212), Expect = 6e-17 Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%) Frame = +3 Query: 201 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 377 YC+ + +Q A+D+ACG G ++C++I C+QP +V H S+A NSYYQK Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331 Query: 378 MGATCDFMGVATLTGADPSAGSCKYP 455 +CDF GVA +T DPS GSC +P Sbjct: 332 ASGSCDFKGVAMITTTDPSHGSCIFP 357
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 81.6 bits (200), Expect = 1e-15 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Frame = +3 Query: 195 AMYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKN 371 +M+CV K+DA+ + +++ACG+G A+C I PC+ P V +H S+A N YYQK Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKM 419 Query: 372 AGMGATCDFMGVATLTGADPSAGSCKY 452 G TCDF G A T DPS +C Y Sbjct: 420 KSAGGTCDFDGTAITTTRDPSYRTCAY 446
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 57.8 bits (138), Expect = 2e-08 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Frame = +3 Query: 198 MYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 374 ++CV AN +++ + AC + C + C++P+S+ H SYA NSY+ + Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFR 447 Query: 375 GMGATCDFMGVATLTGADPSAGSCKYP 455 C F G+A T +P CK+P Sbjct: 448 NQSIQCFFNGLAHETTTNPGNDRCKFP 474
>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 484 Score = 55.8 bits (133), Expect = 9e-08 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 201 YCVCKSDANPVAMQ--KAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 374 +C+ +AN Q ++ YAC ADCT + C +++ + SYA NSYYQ + Sbjct: 365 WCILAPNANLQDPQLGPSVSYACDH-ADCTSLGYGSSCGN-LNLAQNVSYAFNSYYQVSN 422 Query: 375 GMGATCDFMGVATLTGADPSAGSCKY 452 + + C F G++ ++ DPS GSCK+ Sbjct: 423 QLDSACKFPGLSIVSTRDPSVGSCKF 448
>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 477 Score = 53.5 bits (127), Expect = 4e-07 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Frame = +3 Query: 201 YCVCKSDA--NPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 374 +CV K + + + A+ YAC G DCT + C + + SYA NSYYQ Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCAN-LDGKQNISYAFNSYYQIQD 419 Query: 375 GMGATCDFMGVATLTGADPSAGSCKYP 455 + C F ++ +T DPS G+C++P Sbjct: 420 QLDTACKFPNISEVTKTDPSTGTCRFP 446
>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal| development 1) Length = 549 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Frame = +3 Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 353 S ++ CV + + DY C K DC+ I +N + P S+ N Sbjct: 373 SSSLKCVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLN 431 Query: 354 SYYQKNAGMGATCDFMGVATLTGADPSAGSC 446 YY++ + CDF G A+L A +A SC Sbjct: 432 LYYEEQNESKSACDFSGSASLQSAS-TASSC 461
>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)| Length = 548 Score = 40.0 bits (92), Expect = 0.005 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Frame = +3 Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAC 350 S ++ CV D + CG DC+ I+++G + V + CS Y Sbjct: 385 SKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGSKGE-YGVASFCSDKDRLSYVL 442 Query: 351 NSYYQKNAGMGATCDFMGVATLTGADPSAGSCK 449 N YY + CDF G A++ ++GSCK Sbjct: 443 NQYYLDQDKKSSACDFKGSASINSKASASGSCK 475
>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)| Length = 546 Score = 39.7 bits (91), Expect = 0.006 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 5/91 (5%) Frame = +3 Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 353 S ++ CV + Y C K DC I +NG + P S+ N Sbjct: 375 SASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDKLSFVMN 433 Query: 354 SYYQKNAGMGATCDFMGVATLTGADPSAGSC 446 YY++N + CDF G A+L A +A SC Sbjct: 434 LYYEQNKESKSACDFGGSASLQSA-KTASSC 463
>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor| (Glycoprotein GP115) Length = 559 Score = 39.3 bits (90), Expect = 0.008 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%) Frame = +3 Query: 204 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACNSYYQK 368 CV D + + ++ C + DC+ I++NG + + S+ N YY+K Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437 Query: 369 NAGMGATCDFMGVATLTGADPSAGSC 446 + G + C F G ATL A A SC Sbjct: 438 SGGSKSDCSFSGSATLQTATTQA-SC 462
>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor| Length = 542 Score = 37.4 bits (85), Expect = 0.032 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Frame = +3 Query: 204 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YACNSYYQ 365 CV D + Y C + C IT+NG ++C Y ++YY Sbjct: 376 CVINDDVSSDDYSDLFSYVCNE-ISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYS 434 Query: 366 KNAGMGATCDFMGVATLTGADPSAGSC 446 CDF G ATL A + G+C Sbjct: 435 AKGD----CDFSGSATLVSASSATGTC 457
>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal| development 2) Length = 549 Score = 35.0 bits (79), Expect = 0.16 Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Frame = +3 Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACN 353 S + CV D + CG DC I++NG F S SY N Sbjct: 385 SQSFNCVVADDVDAEDYSTLFGEVCGY-IDCGDISANGNTGEYGGFSFCSDKDRLSYVLN 443 Query: 354 SYYQKNAGMGATCDFMGVATLTGADPSAGSC 446 YY CDF G A++ ++ SC Sbjct: 444 QYYHDQNERADACDFAGSASINDNASASTSC 474
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 32.7 bits (73), Expect = 0.79 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +3 Query: 207 VCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGMGA 386 +C ++P Q + AC + C Q C +PI V CS A + QK++ A Sbjct: 137 ICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPA 196 Query: 387 TC 392 C Sbjct: 197 CC 198
>TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor| Length = 667 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = +3 Query: 279 CTQITSNGPCFQPISVVAH--CSYACNSYYQKNAGMGATCDFMGVATLTGADPSAGSCKY 452 CT T+ S VA+ CS N + + N G T F G + GA+ A +CK Sbjct: 449 CTSTTARTVATCKNSNVANGICSSCTNGFLRMNGGCYETTKFPGKSVCEGANADADTCKA 508 Query: 453 P 455 P Sbjct: 509 P 509
>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor| Length = 4007 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = +3 Query: 204 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQP-ISVVAHCSYACNSYYQKNAGM 380 C+C Q + CGKG ++ +G C + +S CSY YQ Sbjct: 242 CICDRGEVRCHKQACLPLRCGKGQ--SRARRHGQCCEECVSPAGSCSYDGVVRYQDEMWK 299 Query: 381 GATCDF 398 G+ C+F Sbjct: 300 GSACEF 305
>NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor| Length = 1278 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITS 296 ++AMY C+ P + KA+ CGK AD T+ Sbjct: 153 ANAMYNACRDVEAPSSNDKALGLLCGKDADACNATN 188
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Frame = +3 Query: 210 CKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKNA 374 C D++ + C + C Q + CF+PI V CS A S Q+++ Sbjct: 145 CSEDSSSCCQHSSCQPTCCTSSPCQQSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSS 204 Query: 375 GMGATC 392 A C Sbjct: 205 CQPACC 210
>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)| (Loop-tail-associated protein) (Loop-tail protein 1) Length = 521 Score = 29.3 bits (64), Expect = 8.7 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 170 QEHEDQRSRHCSKQRDGAR 114 ++H D+R RH SK RDG+R Sbjct: 21 RKHRDRRDRHRSKSRDGSR 39
>DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide| dehydrogenase) Length = 479 Score = 29.3 bits (64), Expect = 8.7 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%) Frame = +2 Query: 17 TPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALARHVRR--- 187 T + PR A AL +E+ + NG ++G AL V + Sbjct: 210 TVVEFAPRCAPTLDSDVTDALVGALKRNGEDEVPMTGIEGVNGTNNGSIALTLEVEQAGG 269 Query: 188 ----LRCDVLRVQVGREP 229 L CD L V VGR P Sbjct: 270 QAETLHCDALLVSVGRRP 287
>RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferase B (EC| 2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase) Length = 434 Score = 29.3 bits (64), Expect = 8.7 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 4/78 (5%) Frame = +2 Query: 5 LHTTTPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALAR--- 175 L T +H LP A+ A ALT A + EL C G H L R Sbjct: 216 LETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHILERTPE 275 Query: 176 -HVRRLRCDVLRVQVGRE 226 V + CD R++ RE Sbjct: 276 SQVVAIDCDETRLKRVRE 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,081,416 Number of Sequences: 219361 Number of extensions: 921053 Number of successful extensions: 3807 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3800 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)