ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart11b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 ... 88 2e-17
2E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (... 87 3e-17
3E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 ... 86 6e-17
4E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 ... 82 1e-15
5EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 ... 58 2e-08
6E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 ... 56 9e-08
7E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 ... 54 4e-07
8EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudo... 42 0.001
9PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regula... 40 0.005
10PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regula... 40 0.006
11GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precur... 39 0.008
12YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor 37 0.032
13EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudo... 35 0.16
14KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-as... 33 0.79
15TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor 32 1.3
16FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor 30 3.9
17NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor 30 6.7
18KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-as... 29 8.7
19VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein ... 29 8.7
20DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Di... 29 8.7
21RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferas... 29 8.7

>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 501

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +3

Query: 201 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 377
           +C+ K   +   +Q A+D+ACG G  DC+ +     C++P  VVAH +YA N+YYQK   
Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419

Query: 378 MGATCDFMGVATLTGADPSAGSCKYP 455
              +CDF GVAT+T  DPS G+C +P
Sbjct: 420 ASGSCDFKGVATVTTTDPSRGTCVFP 445



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>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 461

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 41/84 (48%), Positives = 48/84 (57%)
 Frame = +3

Query: 201 YCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGM 380
           +CV K  AN   +Q  I+YACG   DC  I S G CF P S+ AH SY  N+YYQ N   
Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435

Query: 381 GATCDFMGVATLTGADPSAGSCKY 452
              CDF G   +T +DPS G CKY
Sbjct: 436 DLACDFKGTGIVTSSDPSYGGCKY 459



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>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 402

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +3

Query: 201 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 377
           YC+     +   +Q A+D+ACG G ++C++I     C+QP +V  H S+A NSYYQK   
Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331

Query: 378 MGATCDFMGVATLTGADPSAGSCKYP 455
              +CDF GVA +T  DPS GSC +P
Sbjct: 332 ASGSCDFKGVAMITTTDPSHGSCIFP 357



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>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 505

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = +3

Query: 195 AMYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKN 371
           +M+CV K+DA+   +   +++ACG+G A+C  I    PC+ P  V +H S+A N YYQK 
Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKM 419

Query: 372 AGMGATCDFMGVATLTGADPSAGSCKY 452
              G TCDF G A  T  DPS  +C Y
Sbjct: 420 KSAGGTCDFDGTAITTTRDPSYRTCAY 446



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>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Anther-specific protein A6)
          Length = 478

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +3

Query: 198 MYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 374
           ++CV    AN   +++ +  AC +    C  +     C++P+S+  H SYA NSY+ +  
Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFR 447

Query: 375 GMGATCDFMGVATLTGADPSAGSCKYP 455
                C F G+A  T  +P    CK+P
Sbjct: 448 NQSIQCFFNGLAHETTTNPGNDRCKFP 474



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>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 484

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +3

Query: 201 YCVCKSDANPVAMQ--KAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 374
           +C+   +AN    Q   ++ YAC   ADCT +     C   +++  + SYA NSYYQ + 
Sbjct: 365 WCILAPNANLQDPQLGPSVSYACDH-ADCTSLGYGSSCGN-LNLAQNVSYAFNSYYQVSN 422

Query: 375 GMGATCDFMGVATLTGADPSAGSCKY 452
            + + C F G++ ++  DPS GSCK+
Sbjct: 423 QLDSACKFPGLSIVSTRDPSVGSCKF 448



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>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 477

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = +3

Query: 201 YCVCKSDA--NPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 374
           +CV K +   +   +  A+ YAC  G DCT +     C   +    + SYA NSYYQ   
Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCAN-LDGKQNISYAFNSYYQIQD 419

Query: 375 GMGATCDFMGVATLTGADPSAGSCKYP 455
            +   C F  ++ +T  DPS G+C++P
Sbjct: 420 QLDTACKFPNISEVTKTDPSTGTCRFP 446



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>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal|
           development 1)
          Length = 549

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
 Frame = +3

Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 353
           S ++ CV   + +        DY C K  DC+ I +N        + P       S+  N
Sbjct: 373 SSSLKCVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLN 431

Query: 354 SYYQKNAGMGATCDFMGVATLTGADPSAGSC 446
            YY++     + CDF G A+L  A  +A SC
Sbjct: 432 LYYEEQNESKSACDFSGSASLQSAS-TASSC 461



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>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)|
          Length = 548

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
 Frame = +3

Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAC 350
           S ++ CV   D +           CG   DC+ I+++G   +   V + CS      Y  
Sbjct: 385 SKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGSKGE-YGVASFCSDKDRLSYVL 442

Query: 351 NSYYQKNAGMGATCDFMGVATLTGADPSAGSCK 449
           N YY       + CDF G A++     ++GSCK
Sbjct: 443 NQYYLDQDKKSSACDFKGSASINSKASASGSCK 475



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>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)|
          Length = 546

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
 Frame = +3

Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 353
           S ++ CV     +         Y C K  DC  I +NG       + P       S+  N
Sbjct: 375 SASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDKLSFVMN 433

Query: 354 SYYQKNAGMGATCDFMGVATLTGADPSAGSC 446
            YY++N    + CDF G A+L  A  +A SC
Sbjct: 434 LYYEQNKESKSACDFGGSASLQSA-KTASSC 463



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>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor|
           (Glycoprotein GP115)
          Length = 559

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = +3

Query: 204 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACNSYYQK 368
           CV   D +    +   ++ C +  DC+ I++NG       +   +     S+  N YY+K
Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437

Query: 369 NAGMGATCDFMGVATLTGADPSAGSC 446
           + G  + C F G ATL  A   A SC
Sbjct: 438 SGGSKSDCSFSGSATLQTATTQA-SC 462



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>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor|
          Length = 542

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
 Frame = +3

Query: 204 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YACNSYYQ 365
           CV   D +         Y C +   C  IT+NG         ++C       Y  ++YY 
Sbjct: 376 CVINDDVSSDDYSDLFSYVCNE-ISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYS 434

Query: 366 KNAGMGATCDFMGVATLTGADPSAGSC 446
                   CDF G ATL  A  + G+C
Sbjct: 435 AKGD----CDFSGSATLVSASSATGTC 457



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>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal|
           development 2)
          Length = 549

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
 Frame = +3

Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACN 353
           S +  CV   D +           CG   DC  I++NG       F   S     SY  N
Sbjct: 385 SQSFNCVVADDVDAEDYSTLFGEVCGY-IDCGDISANGNTGEYGGFSFCSDKDRLSYVLN 443

Query: 354 SYYQKNAGMGATCDFMGVATLTGADPSAGSC 446
            YY         CDF G A++     ++ SC
Sbjct: 444 QYYHDQNERADACDFAGSASINDNASASTSC 474



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>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +3

Query: 207 VCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGMGA 386
           +C   ++P   Q +   AC   + C Q      C +PI  V  CS A +   QK++   A
Sbjct: 137 ICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPA 196

Query: 387 TC 392
            C
Sbjct: 197 CC 198



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>TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor|
          Length = 667

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +3

Query: 279 CTQITSNGPCFQPISVVAH--CSYACNSYYQKNAGMGATCDFMGVATLTGADPSAGSCKY 452
           CT  T+        S VA+  CS   N + + N G   T  F G +   GA+  A +CK 
Sbjct: 449 CTSTTARTVATCKNSNVANGICSSCTNGFLRMNGGCYETTKFPGKSVCEGANADADTCKA 508

Query: 453 P 455
           P
Sbjct: 509 P 509



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>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor|
          Length = 4007

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +3

Query: 204 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQP-ISVVAHCSYACNSYYQKNAGM 380
           C+C         Q  +   CGKG   ++   +G C +  +S    CSY     YQ     
Sbjct: 242 CICDRGEVRCHKQACLPLRCGKGQ--SRARRHGQCCEECVSPAGSCSYDGVVRYQDEMWK 299

Query: 381 GATCDF 398
           G+ C+F
Sbjct: 300 GSACEF 305



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>NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor|
          Length = 1278

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 189 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITS 296
           ++AMY  C+    P +  KA+   CGK AD    T+
Sbjct: 153 ANAMYNACRDVEAPSSNDKALGLLCGKDADACNATN 188



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>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated|
           protein 10.5) (High sulfur keratin-associated protein
           10.5) (Keratin-associated protein 18-5)
           (Keratin-associated protein 18.5)
          Length = 271

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
 Frame = +3

Query: 210 CKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKNA 374
           C  D++      +    C   + C Q     +     CF+PI  V  CS A  S  Q+++
Sbjct: 145 CSEDSSSCCQHSSCQPTCCTSSPCQQSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSS 204

Query: 375 GMGATC 392
              A C
Sbjct: 205 CQPACC 210



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>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)|
           (Loop-tail-associated protein) (Loop-tail protein 1)
          Length = 521

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 170 QEHEDQRSRHCSKQRDGAR 114
           ++H D+R RH SK RDG+R
Sbjct: 21  RKHRDRRDRHRSKSRDGSR 39



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>DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide|
           dehydrogenase)
          Length = 479

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
 Frame = +2

Query: 17  TPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALARHVRR--- 187
           T +   PR A             AL     +E+ +      NG ++G  AL   V +   
Sbjct: 210 TVVEFAPRCAPTLDSDVTDALVGALKRNGEDEVPMTGIEGVNGTNNGSIALTLEVEQAGG 269

Query: 188 ----LRCDVLRVQVGREP 229
               L CD L V VGR P
Sbjct: 270 QAETLHCDALLVSVGRRP 287



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>RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 434

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
 Frame = +2

Query: 5   LHTTTPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALAR--- 175
           L T   +H LP  A+         A  ALT  A +  EL    C   G    H L R   
Sbjct: 216 LETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHILERTPE 275

Query: 176 -HVRRLRCDVLRVQVGRE 226
             V  + CD  R++  RE
Sbjct: 276 SQVVAIDCDETRLKRVRE 293


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,081,416
Number of Sequences: 219361
Number of extensions: 921053
Number of successful extensions: 3807
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3800
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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