ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11b12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110150.1| Zea mays CL16078_1 mRNA sequence Length = 1241 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 335 ctgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgcga 394 |||||||||| |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 267 ctgctcctacatctgcaacagctactaccagagccgcagcggcatgggcgccacctgcga 326 Query: 395 cttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcctgcaa 448 ||||| ||||||||||||||||||||| | ||||||||| |||| ||||||| Sbjct: 327 cttcaacggcgtcgccaccctcaccggcaccgaccccagctccgggacctgcaa 380
>ref|XM_475700.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 687 Score = 105 bits (53), Expect = 2e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 163 tgctcttgctcgccatgttcgccggctcagatgcgatgtactgcgtgtgcaagtcggacg 222 |||||||||| ||||||| | | |||||||||| | || ||||||||||||| | ||| Sbjct: 23 tgctcttgctggccatgtccacaggctcagatggggcgttctgcgtgtgcaagcccgacc 82 Query: 223 cgaacccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 || ||||| ||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 83 agagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgca 142 Query: 283 cccagatca 291 ||||||||| Sbjct: 143 cccagatca 151 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 325 tcgtcgcccactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcg 384 ||||||| ||||||||||||||| |||| ||||| |||||||||| | ||| |||| Sbjct: 185 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 244 Query: 385 ccacctgcgacttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcct 444 |||||||||||||| |||||||||||||||||| | | ||||||||| |||| ||| Sbjct: 245 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 304 Query: 445 gcaaataccccgccagcgcaagcggcgtgggcac 478 |||| ||||| |||| ||| |||||||| ||||| Sbjct: 305 gcaagtacccggccaccgctagcggcgtaggcac 338
>dbj|AK101753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063E20, full insert sequence Length = 1020 Score = 105 bits (53), Expect = 2e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 163 tgctcttgctcgccatgttcgccggctcagatgcgatgtactgcgtgtgcaagtcggacg 222 |||||||||| ||||||| | | |||||||||| | || ||||||||||||| | ||| Sbjct: 144 tgctcttgctggccatgtccacaggctcagatggggcgttctgcgtgtgcaagcccgacc 203 Query: 223 cgaacccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 || ||||| ||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 204 agagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgca 263 Query: 283 cccagatca 291 ||||||||| Sbjct: 264 cccagatca 272 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 325 tcgtcgcccactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcg 384 ||||||| ||||||||||||||| |||| ||||| |||||||||| | ||| |||| Sbjct: 306 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 365 Query: 385 ccacctgcgacttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcct 444 |||||||||||||| |||||||||||||||||| | | ||||||||| |||| ||| Sbjct: 366 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 425 Query: 445 gcaaataccccgccagcgcaagcggcgtgggcac 478 |||| ||||| |||| ||| |||||||| ||||| Sbjct: 426 gcaagtacccggccaccgctagcggcgtaggcac 459
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 203 ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcagaaggccatcgactacgcgtg 262 ||||||||||||| | ||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 62527 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 62586 Query: 263 cggcaagggcgccgactgcacccagatca 291 | | |||||||||||||||||||||| Sbjct: 62587 ctggcgcggcgccgactgcacccagatca 62615 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 325 tcgtcgcccactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcg 384 ||||||| ||||||||||||||| |||| ||||| |||||||||| | ||| |||| Sbjct: 62649 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 62708 Query: 385 ccacctgcgacttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcct 444 |||||||||||||| |||||||||||||||||| | | ||||||||| |||| ||| Sbjct: 62709 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 62768 Query: 445 gcaaataccccgcca 459 |||| ||||| |||| Sbjct: 62769 gcaagtacccggcca 62783
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 203 ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcagaaggccatcgactacgcgtg 262 ||||||||||||| | ||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 142341 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 142400 Query: 263 cggcaagggcgccgactgcacccagatca 291 | | |||||||||||||||||||||| Sbjct: 142401 ctggcgcggcgccgactgcacccagatca 142429 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 325 tcgtcgcccactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcg 384 ||||||| ||||||||||||||| |||| ||||| |||||||||| | ||| |||| Sbjct: 142463 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 142522 Query: 385 ccacctgcgacttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcct 444 |||||||||||||| |||||||||||||||||| | | ||||||||| |||| ||| Sbjct: 142523 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 142582 Query: 445 gcaaataccccgcca 459 |||| ||||| |||| Sbjct: 142583 gcaagtacccggcca 142597
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 203 ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcagaaggccatcgactacgcgtg 262 ||||||||||||| | ||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 25199686 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 25199745 Query: 263 cggcaagggcgccgactgcacccagatca 291 | | |||||||||||||||||||||| Sbjct: 25199746 ctggcgcggcgccgactgcacccagatca 25199774 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 325 tcgtcgcccactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcg 384 ||||||| ||||||||||||||| |||| ||||| |||||||||| | ||| |||| Sbjct: 25199808 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 25199867 Query: 385 ccacctgcgacttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcct 444 |||||||||||||| |||||||||||||||||| | | ||||||||| |||| ||| Sbjct: 25199868 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 25199927 Query: 445 gcaaataccccgcca 459 |||| ||||| |||| Sbjct: 25199928 gcaagtacccggcca 25199942 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 344 cgcctgcaacagctactaccagaagaac 371 ||||| |||||||||||||||||||||| Sbjct: 28731509 cgccttcaacagctactaccagaagaac 28731482
>gb|BT017886.1| Zea mays clone EL01N0514G06.c mRNA sequence Length = 1129 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 335 ctgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgcga 394 |||||||||| |||||||||||||||||||| | || || ||||||||||||||| Sbjct: 331 ctgctcctacatctgcaacagctactaccagagccgcagcgccacgggcgccacctgcga 390 Query: 395 cttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcctgcaa 448 ||||| ||||||||||| ||||||||| | ||||||||| |||| ||||||| Sbjct: 391 cttcaacggcgtcgccacgctcaccggcaccgaccccagctccggcacctgcaa 444 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgc 281 |||||||||| ||| ||||||||||| |||| |||||| ||||||||| Sbjct: 229 ggcgatgcaggcggcgatcgactacgcctgcgccaagggggccgactgc 277
>ref|XM_479043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgc 392 |||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 193 cactgctcctgggccgccaacagctacttccagaggaacagggccatgggcgccacctgc 252 Query: 393 gacttcatgggcgtcgccaccctcacc 419 ||||||| ||| ||||||||||||| Sbjct: 253 gacttcaccggcaccgccaccctcacc 279 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 93 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 142
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgc 392 |||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 24452824 cactgctcctgggccgccaacagctacttccagaggaacagggccatgggcgccacctgc 24452883 Query: 393 gacttcatgggcgtcgccaccctcacc 419 ||||||| ||| ||||||||||||| Sbjct: 24452884 gacttcaccggcaccgccaccctcacc 24452910 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 24452724 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 24452773
>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ2013_G04 Length = 73667 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgc 392 |||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 2634 cactgctcctgggccgccaacagctacttccagaggaacagggccatgggcgccacctgc 2693 Query: 393 gacttcatgggcgtcgccaccctcacc 419 ||||||| ||| ||||||||||||| Sbjct: 2694 gacttcaccggcaccgccaccctcacc 2720 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 2534 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 2583
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgc 392 |||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 78691 cactgctcctgggccgccaacagctacttccagaggaacagggccatgggcgccacctgc 78750 Query: 393 gacttcatgggcgtcgccaccctcacc 419 ||||||| ||| ||||||||||||| Sbjct: 78751 gacttcaccggcaccgccaccctcacc 78777 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 78591 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 78640
>dbj|AK112017.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A05, full insert sequence Length = 1116 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgc 392 |||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 304 cactgctcctgggccgccaacagctacttccagaggaacagggccatgggcgccacctgc 363 Query: 393 gacttcatgggcgtcgccaccctcacc 419 ||||||| ||| ||||||||||||| Sbjct: 364 gacttcaccggcaccgccaccctcacc 390 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 204 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 253
>dbj|AK111970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C09, full insert sequence Length = 1182 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgc 392 |||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 369 cactgctcctgggccgccaacagctacttccagaggaacagggccatgggcgccacctgc 428 Query: 393 gacttcatgggcgtcgccaccctcacc 419 ||||||| ||| ||||||||||||| Sbjct: 429 gacttcaccggcaccgccaccctcacc 455 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 269 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 318
>dbj|AK111913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126J18, full insert sequence Length = 1119 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgccggcatgggcgccacctgc 392 |||||||||| ||| ||||||||||| ||||| |||| | |||||||||||||||| Sbjct: 310 cactgctcctgggccgccaacagctacttccagaggaacagggccatgggcgccacctgc 369 Query: 393 gacttcatgggcgtcgccaccctcacc 419 ||||||| ||| ||||||||||||| Sbjct: 370 gacttcaccggcaccgccaccctcacc 396 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 233 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 210 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 259
>ref|NM_192939.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 840 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 338 ctcctacgcctgcaacagctactaccagaagaac 371 ||||||||||| |||||||||||||||||||||| Sbjct: 411 ctcctacgccttcaacagctactaccagaagaac 444
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 338 ctcctacgcctgcaacagctactaccagaagaac 371 ||||||||||| |||||||||||||||||||||| Sbjct: 25268622 ctcctacgccttcaacagctactaccagaagaac 25268655 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 333 cactgctcctacgcctgcaacagctactaccag 365 ||||||||||||||| ||||||||||| |||| Sbjct: 32139958 cactgctcctacgccgccaacagctacttccag 32139926 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 gggcgccacctgcgacttcatgggcgtcgccaccctc 416 ||||||||||||||||||| |||| |||||||||| Sbjct: 32139908 gggcgccacctgcgacttcggcggcgccgccaccctc 32139872
>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158C05 Length = 145514 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 338 ctcctacgcctgcaacagctactaccagaagaac 371 ||||||||||| |||||||||||||||||||||| Sbjct: 65666 ctcctacgccttcaacagctactaccagaagaac 65699
>dbj|AK063308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F12, full insert sequence Length = 1275 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 338 ctcctacgcctgcaacagctactaccagaagaac 371 ||||||||||| |||||||||||||||||||||| Sbjct: 484 ctcctacgccttcaacagctactaccagaagaac 517
>gb|AC009475.5| Homo sapiens BAC clone RP11-285F23 from 2, complete sequence Length = 190349 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 3 cactgcacaccaccaccccactccactctctc 34 |||||||| ||||||||||||||||||||||| Sbjct: 188330 cactgcaccccaccaccccactccactctctc 188361
>ref|NM_191356.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 510 Score = 54.0 bits (27), Expect = 5e-04 Identities = 101/125 (80%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgcc---ggcatgggcgccacc 389 ||||||||||||||| ||||||||||| |||| ||| || | || |||||||||| Sbjct: 202 cactgctcctacgccgccaacagctacttccagcggaattcccaggccaagggcgccacc 261 Query: 390 tgcgacttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcctgcaaa 449 ||||||||| |||| |||||||||| || | | ||||||||| | ||| |||||||| Sbjct: 262 tgcgacttcggcggcgccgccaccctctcctccaccgaccccagctcaggaacctgcaaa 321 Query: 450 taccc 454 ||||| Sbjct: 322 taccc 326
>dbj|AK108127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D06, full insert sequence Length = 954 Score = 54.0 bits (27), Expect = 5e-04 Identities = 101/125 (80%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 333 cactgctcctacgcctgcaacagctactaccagaagaacgcc---ggcatgggcgccacc 389 ||||||||||||||| ||||||||||| |||| ||| || | || |||||||||| Sbjct: 307 cactgctcctacgccgccaacagctacttccagcggaattcccaggccaagggcgccacc 366 Query: 390 tgcgacttcatgggcgtcgccaccctcaccggcgctgaccccagcgccggatcctgcaaa 449 ||||||||| |||| |||||||||| || | | ||||||||| | ||| |||||||| Sbjct: 367 tgcgacttcggcggcgccgccaccctctcctccaccgaccccagctcaggaacctgcaaa 426 Query: 450 taccc 454 ||||| Sbjct: 427 taccc 431
>gb|AY109031.1| Zea mays PCO112628 mRNA sequence Length = 676 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacgccggcatgggcgccacctgcgacttca 399 |||||||||||||||||| ||| | || |||||||||||||||||||| Sbjct: 487 caacagctactaccagaacaacaaggccaagggcgccacctgcgacttca 536
>gb|BT017148.1| Zea mays clone EL01N0366H12.c mRNA sequence Length = 902 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 322 ccgtcgtcgcccactgctcctacgcctgcaacagctactaccagaagaacgccggcatgg 381 |||||| ||| |||||||||| ||| |||||||||||||||||| ||| | || || Sbjct: 119 ccgtcgccgcgcactgctcctgggccgccaacagctactaccagaacaacaaggccaggg 178 Query: 382 gcgccacctgcga 394 ||||||||||||| Sbjct: 179 gcgccacctgcga 191
>ref|XM_475945.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 344 cgcctgcaacagctactaccagaagaac 371 ||||| |||||||||||||||||||||| Sbjct: 471 cgccttcaacagctactaccagaagaac 498
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 344 cgcctgcaacagctactaccagaagaac 371 ||||| |||||||||||||||||||||| Sbjct: 50222 cgccttcaacagctactaccagaagaac 50195
>gb|S53300.1| per=period {Thr-Gly repeat} [Drosophila teissieri, Genomic, 123 nt] Length = 123 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 528 ggcatgggaaccggcacaggaaccagcaccggaacgggcacggg 571 |||| |||||| ||||||||||| |||| |||||||||||||| Sbjct: 31 ggcacgggaacaggcacaggaacaggcactggaacgggcacggg 74
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.033 Identities = 54/64 (84%) Strand = Plus / Plus Query: 228 ccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgcacccag 287 |||| ||||||||||||||| || ||||||||||| | ||||||||||||||||| Sbjct: 3468411 ccggcggcgatgcagaaggcaattgactacgcgtgttggcgcagcgccgactgcacccag 3468470 Query: 288 atca 291 |||| Sbjct: 3468471 atca 3468474
>gb|AF251252.1|AF251252 Drosophila teissieri isolate 2 period (per) gene, partial cds Length = 643 Score = 48.1 bits (24), Expect = 0.033 Identities = 71/86 (82%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 486 ggcaccggcggcatgggcaccggcgctggagcaggcactggcggcatgggaaccggcaca 545 |||||||| |||| |||||| ||| ||||| | ||||||||| | |||||| ||||| Sbjct: 34 ggcaccggtggcacgggcacgggcactggaacgggcactggc---acgggaacgggcacg 90 Query: 546 ggaaccagcaccggaacgggcacggg 571 ||||| |||| |||||||||||||| Sbjct: 91 ggaacaggcactggaacgggcacggg 116
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 48.1 bits (24), Expect = 0.033 Identities = 54/64 (84%) Strand = Plus / Plus Query: 228 ccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgcacccag 287 |||| ||||||||||||||| || ||||||||||| | ||||||||||||||||| Sbjct: 85115 ccggcggcgatgcagaaggcaattgactacgcgtgttggcgcagcgccgactgcacccag 85174 Query: 288 atca 291 |||| Sbjct: 85175 atca 85178
>dbj|AK109090.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A02, full insert sequence Length = 1233 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 344 cgcctgcaacagctactaccagaagaac 371 ||||| |||||||||||||||||||||| Sbjct: 581 cgccttcaacagctactaccagaagaac 608
>gb|AY110724.1| Zea mays CL16591_1 mRNA sequence Length = 915 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 330 gcccactgctcctacgcctgcaacagctactaccag 365 |||||||||||||||||| |||||||| ||||||| Sbjct: 606 gcccactgctcctacgccgccaacagcttctaccag 571
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 agaagaacgccggcatgggcgcc 386 ||||||||||||||||||||||| Sbjct: 240197 agaagaacgccggcatgggcgcc 240219
>ref|XM_469816.1| Oryza sativa (japonica cultivar-group), mRNA Length = 754 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 252 gactacgcgtgcggcaagggcgccgactgca 282 ||||||||||||||| | ||||||||||||| Sbjct: 127 gactacgcgtgcggcgacggcgccgactgca 157
>ref|XM_464085.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1850 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacg 372 ||||||||||||||||||||||| Sbjct: 1421 caacagctactaccagaagaacg 1443
>ref|XM_506715.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0026E05.37 mRNA Length = 2462 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacg 372 ||||||||||||||||||||||| Sbjct: 1931 caacagctactaccagaagaacg 1953
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 322 ccgtcgtcgcccactgctcctacgcctgcaacagctactaccagaag 368 |||||| |||||||||||||| ||| ||||||||||| ||||||| Sbjct: 106183 ccgtcgccgcccactgctcctgggccgccaacagctacttccagaag 106137 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 381 ggcgccacctgcgacttcatgggcgtcgccaccctc 416 |||||||||||||||||| |||| |||||||||| Sbjct: 106124 ggcgccacctgcgacttcggcggcgccgccaccctc 106089
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 gactacgcgtgcggcaagggcgccgactgca 282 ||||||||||||||| | ||||||||||||| Sbjct: 30914600 gactacgcgtgcggcgacggcgccgactgca 30914570 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 322 ccgtcgtcgcccactgctcctacgcctgcaacagctactaccagaag 368 |||||| |||||||||||||| ||| ||||||||||| ||||||| Sbjct: 17383806 ccgtcgccgcccactgctcctgggccgccaacagctacttccagaag 17383760 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 381 ggcgccacctgcgacttcatgggcgtcgccaccctc 416 |||||||||||||||||| |||| |||||||||| Sbjct: 17383747 ggcgccacctgcgacttcggcggcgccgccaccctc 17383712
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 252 gactacgcgtgcggcaagggcgccgactgca 282 ||||||||||||||| | ||||||||||||| Sbjct: 28490 gactacgcgtgcggcgacggcgccgactgca 28520
>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence Length = 216320 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 149 tcctctggtcctcatgctcttgc 171 ||||||||||||||||||||||| Sbjct: 49892 tcctctggtcctcatgctcttgc 49914
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 gactacgcgtgcggcaagggcgccgactgca 282 ||||||||||||||| | ||||||||||||| Sbjct: 31005123 gactacgcgtgcggcgacggcgccgactgca 31005093 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 322 ccgtcgtcgcccactgctcctacgcctgcaacagctactaccagaag 368 |||||| |||||||||||||| ||| ||||||||||| ||||||| Sbjct: 17377347 ccgtcgccgcccactgctcctgggccgccaacagctacttccagaag 17377301 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 381 ggcgccacctgcgacttcatgggcgtcgccaccctc 416 |||||||||||||||||| |||| |||||||||| Sbjct: 17377288 ggcgccacctgcgacttcggcggcgccgccaccctc 17377253
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacg 372 ||||||||||||||||||||||| Sbjct: 2100286 caacagctactaccagaagaacg 2100308
>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete sequence Length = 245536 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 149 tcctctggtcctcatgctcttgc 171 ||||||||||||||||||||||| Sbjct: 81103 tcctctggtcctcatgctcttgc 81081
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacg 372 ||||||||||||||||||||||| Sbjct: 150494 caacagctactaccagaagaacg 150516
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacg 372 ||||||||||||||||||||||| Sbjct: 14979 caacagctactaccagaagaacg 15001
>dbj|AK103836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148G11, full insert sequence Length = 820 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 252 gactacgcgtgcggcaagggcgccgactgca 282 ||||||||||||||| | ||||||||||||| Sbjct: 211 gactacgcgtgcggcgacggcgccgactgca 241
>dbj|AK101322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E16, full insert sequence Length = 2462 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacg 372 ||||||||||||||||||||||| Sbjct: 1931 caacagctactaccagaagaacg 1953
>dbj|AK099491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026N15, full insert sequence Length = 926 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 ccgtcgtcgcccactgctcctacgcctgcaacagctactaccagaag 368 |||||| |||||||||||||| ||| ||||||||||| ||||||| Sbjct: 289 ccgtcgccgcccactgctcctgggccgccaacagctacttccagaag 335 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 381 ggcgccacctgcgacttcatgggcgtcgccaccctc 416 |||||||||||||||||| |||| |||||||||| Sbjct: 348 ggcgccacctgcgacttcggcggcgccgccaccctc 383
>dbj|AK072088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O04, full insert sequence Length = 1849 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 caacagctactaccagaagaacg 372 ||||||||||||||||||||||| Sbjct: 1420 caacagctactaccagaagaacg 1442
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 cgagagaagagctcgagctcca 123 |||||||||||||||||||||| Sbjct: 12191283 cgagagaagagctcgagctcca 12191262 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 328 tcgcccactgctcctacgcctgcaacagctact 360 |||||||| ||||||||||| ||||||||||| Sbjct: 21983354 tcgcccacgcctcctacgccttcaacagctact 21983322
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 cgagagaagagctcgagctcca 123 |||||||||||||||||||||| Sbjct: 102742 cgagagaagagctcgagctcca 102721
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 cgagagaagagctcgagctcca 123 |||||||||||||||||||||| Sbjct: 125662 cgagagaagagctcgagctcca 125641
>ref|XM_473861.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2742 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 328 tcgcccactgctcctacgcctgcaacagctact 360 |||||||| ||||||||||| ||||||||||| Sbjct: 2294 tcgcccacgcctcctacgccttcaacagctact 2262
>gb|BT017188.1| Zea mays clone EL01N0370G02.c mRNA sequence Length = 679 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 238 tgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 282 |||||||||| | ||||||||||||||| ||||||||||||| Sbjct: 132 tgcagaaggcactggactacgcgtgcggcgccggcgccgactgca 176 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 330 gcccactgctcctacgcctgcaacagctactaccag 365 ||||| |||||||||||| |||||||| ||||||| Sbjct: 224 gcccagtgctcctacgccgtcaacagcttctaccag 259
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 333 cactgctcctacgcctgcaacagctactaccag 365 ||||||||||||||| |||||||| ||||||| Sbjct: 82727 cactgctcctacgccgtcaacagcttctaccag 82695
>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete sequence Length = 216902 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 caccaccaccccactccactctctcccac 38 ||||||||||||||||||| ||| ||||| Sbjct: 176939 caccaccaccccactccaccctcccccac 176911
>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3' end of the COL4A2 gene for collagen type IV alpha 2, the RAB20 gene for a RAS oncogene family member, a novel gene (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene (FLJ12118) and three CpG islands, complete sequence Length = 177392 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 tgggcactggagcaggcaccg 492 ||||||||||||||||||||| Sbjct: 148784 tgggcactggagcaggcaccg 148804
>emb|X53086.1|SMPROBAG S.marcescens proBA genes for gamma-glutamyl kinase (EC 2.7.2.11) and gamma-glutamyl-phosphate reductase (EC 1.2.1.41) Length = 2926 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 ggcaccggcggcatgggcacc 506 ||||||||||||||||||||| Sbjct: 809 ggcaccggcggcatgggcacc 829
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 gggcgtcgccaccctcaccgg 421 ||||||||||||||||||||| Sbjct: 103375 gggcgtcgccaccctcaccgg 103355
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 328 tcgcccactgctcctacgcctgcaacagctact 360 |||||||| ||||||||||| ||||||||||| Sbjct: 58506 tcgcccacgcctcctacgccttcaacagctact 58474
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 cgtcgccaccctcaccggcgc 424 ||||||||||||||||||||| Sbjct: 136774 cgtcgccaccctcaccggcgc 136754
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 cggcgctgaccccagcgccgg 439 ||||||||||||||||||||| Sbjct: 2274765 cggcgctgaccccagcgccgg 2274745
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 328 tcgcccactgctcctacgcctgcaacagctact 360 |||||||| ||||||||||| ||||||||||| Sbjct: 31076425 tcgcccacgcctcctacgccttcaacagctact 31076393
>gb|AF251253.1|AF251253 Drosophila teissieri isolate 4 period (per) gene, partial cds Length = 652 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 528 ggcatgggaaccggcacaggaaccagcaccggaacgggcacgggc 572 |||| |||||| ||||||||||| |||| || |||||||||||| Sbjct: 67 ggcacgggaacaggcacaggaacaggcactggtacgggcacgggc 111
>gb|AF251251.1|AF251251 Drosophila teissieri isolate 1 period (per) gene, partial cds Length = 646 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 528 ggcatgggaaccggcacaggaaccagcaccggaacgggcacgggc 572 |||| |||||| ||||||||||| |||| || |||||||||||| Sbjct: 67 ggcacgggaacaggcacaggaacaggcactggtacgggcacgggc 111
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 333 cactgctcctacgcctgcaacagctactaccag 365 ||||||||||||||| ||||||||||| |||| Sbjct: 10711 cactgctcctacgccgccaacagctacttccag 10679 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 gggcgccacctgcgacttcatgggcgtcgccaccctc 416 ||||||||||||||||||| |||| |||||||||| Sbjct: 10661 gggcgccacctgcgacttcggcggcgccgccaccctc 10625
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 cggcggcatgggcaccggcgc 511 ||||||||||||||||||||| Sbjct: 36751 cggcggcatgggcaccggcgc 36731
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 cgtcgccaccctcaccggcgc 424 ||||||||||||||||||||| Sbjct: 1844514 cgtcgccaccctcaccggcgc 1844494
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 328 tcgcccactgctcctacgcctgcaacagctact 360 |||||||| ||||||||||| ||||||||||| Sbjct: 25418 tcgcccacgcctcctacgccttcaacagctact 25386
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 328 tcgcccactgctcctacgcctgcaacagctact 360 |||||||| ||||||||||| ||||||||||| Sbjct: 114071 tcgcccacgcctcctacgccttcaacagctact 114039
>dbj|AK060663.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B06, full insert sequence Length = 1448 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 328 tcgcccactgctcctacgcctgcaacagctact 360 |||||||| ||||||||||| ||||||||||| Sbjct: 989 tcgcccacgcctcctacgccttcaacagctact 1021
>gb|AY107317.1| Zea mays PCO061688 mRNA sequence Length = 738 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 339 tcctacgcctgcaacagctactaccagaagaac 371 |||||||||| |||| |||||||||||||||| Sbjct: 540 tcctacgcctacaacgactactaccagaagaac 572
>dbj|D90351.1|SMAPROBA Serratia marcescens proBA operon genes for gamma-glutamyl kinase, gamma-glutamyl phosphate reductase Length = 2926 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 ggcaccggcggcatgggcacc 506 ||||||||||||||||||||| Sbjct: 809 ggcaccggcggcatgggcacc 829
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 cgtcgccaccctcaccggcgc 424 ||||||||||||||||||||| Sbjct: 135206 cgtcgccaccctcaccggcgc 135186
>gb|AC003669.1|AC003669 Homo sapiens Xp22 BAC GS-594A7 (Genome Systems Human BAC library) contains Bmx gene, complete sequence Length = 159446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tcctctggtcctcatgctctt 169 ||||||||||||||||||||| Sbjct: 118659 tcctctggtcctcatgctctt 118679
>gb|AC121498.12| Mus musculus chromosome 1, clone RP23-38P22, complete sequence Length = 152264 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ctccctccccctctttgcttgcca 76 |||||||||||| ||||||||||| Sbjct: 26374 ctccctccccctttttgcttgcca 26351
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 catgggcgtcgccaccctcaccgg 421 |||| ||||||||||||||||||| Sbjct: 128589 catgtgcgtcgccaccctcaccgg 128566
>ref|XM_365165.1| Magnaporthe grisea 70-15 predicted protein (MG10010.4) partial mRNA Length = 345 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 ggcgctgaccccagcgccgg 439 |||||||||||||||||||| Sbjct: 208 ggcgctgaccccagcgccgg 227
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ctggagcaggcactggcggc 530 |||||||||||||||||||| Sbjct: 2493794 ctggagcaggcactggcggc 2493813
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ggtggcgatgcagaaggccatcga 253 |||||||||||||||| ||||||| Sbjct: 3846413 ggtggcgatgcagaagtccatcga 3846390
>emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L9 on chromosome 20 Contains the 5' end of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, the RPLP0P1 gene for ribosomal protein large P0 pseudogene 1 and a CpG island, complete sequence Length = 119696 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 ccactccactctctcccacgccac 43 ||||||||||||||||||| |||| Sbjct: 78560 ccactccactctctcccactccac 78583
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 cgtcgccaccctcaccggcg 423 |||||||||||||||||||| Sbjct: 74313 cgtcgccaccctcaccggcg 74294
>gb|AC091206.3| Drosophila melanogaster 3L BAC RP98-19M9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178019 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cacaccaccaccccactcca 27 |||||||||||||||||||| Sbjct: 67307 cacaccaccaccccactcca 67326
>gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172284 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cacaccaccaccccactcca 27 |||||||||||||||||||| Sbjct: 58902 cacaccaccaccccactcca 58883
>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence Length = 212548 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ctctggtcctcatgctcttg 170 |||||||||||||||||||| Sbjct: 111965 ctctggtcctcatgctcttg 111946
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 537 accggcacaggaaccagcaccggaacgggcac 568 ||||||||||||||| ||||||| || ||||| Sbjct: 1186198 accggcacaggaaccggcaccggcaccggcac 1186229 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 537 accggcacaggaaccagcaccggaacgggcac 568 ||||||||||||||| ||||||| || ||||| Sbjct: 1140710 accggcacaggaaccggcaccggcaccggcac 1140679
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 caccggcggcatgggcaccggcgc 511 |||| ||||||||||||||||||| Sbjct: 2892363 caccagcggcatgggcaccggcgc 2892386
>gb|AF275943.1|AF275943 Streptomyces avermitilis avermectin polyketide synthase gene, partial cds Length = 11096 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 537 accggcacaggaaccagcaccggaacgggcac 568 ||||||||||||||| ||||||| || ||||| Sbjct: 3002 accggcacaggaaccggcaccggcaccggcac 2971
>gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169819 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caccccactccactctctcc 35 |||||||||||||||||||| Sbjct: 115143 caccccactccactctctcc 115162
>emb|Z18360.1|OLDISREP Oryza latifolia dispersed repeat Length = 1783 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 accccgccagcgcaagcggc 470 |||||||||||||||||||| Sbjct: 1061 accccgccagcgcaagcggc 1080
>gb|AF162938.1|AF162938 Streptomyces coelicolor A3(2) H3U (h3u) and GltB (gltB) genes, partial cds Length = 2023 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cgtcgccaccctcaccggcg 423 |||||||||||||||||||| Sbjct: 1235 cgtcgccaccctcaccggcg 1254
>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete sequence Length = 297894 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cacaccaccaccccactcca 27 |||||||||||||||||||| Sbjct: 267967 cacaccaccaccccactcca 267948
>dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gene cluster (aveA1, aveA2, aveA3, aveA4) and aveC, aveE genes, complete cds Length = 64957 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 537 accggcacaggaaccagcaccggaacgggcac 568 ||||||||||||||| ||||||| || ||||| Sbjct: 48482 accggcacaggaaccggcaccggcaccggcac 48513 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 537 accggcacaggaaccagcaccggaacgggcac 568 ||||||||||||||| ||||||| || ||||| Sbjct: 2994 accggcacaggaaccggcaccggcaccggcac 2963 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,015,785 Number of Sequences: 3902068 Number of extensions: 4015785 Number of successful extensions: 85174 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83242 Number of HSP's gapped (non-prelim): 1923 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
