ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11b07 |
|---|---|
| Clone Library Name | barley_pub |
>ZN342_HUMAN (Q8WUU4) Zinc finger protein 342| Length = 475 Score = 35.0 bits (79), Expect = 0.13 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 6/80 (7%) Frame = +2 Query: 20 SSQL-RHPNSTRKRPPASLISPYRHTRLRSKLPPLPN-----PTTRFACHGEPGRGAARG 181 SS+L RH + R+ PP S + S PP P PT+ C G G GAA Sbjct: 271 SSKLNRHKKTHRQVPPQSPLMADTSQEQASAAPPEPAVHAAAPTSTLPCSGGEGAGAAAT 330 Query: 182 TVVRPAPSSPSGMKQQGYGG 241 V+ P +P Q G GG Sbjct: 331 AGVQ-EPGAPGSGAQAGPGG 349
>KCNQ2_HUMAN (O43526) Potassium voltage-gated channel subfamily KQT member 2| (Voltage-gated potassium channel subunit Kv7.2) (Neuroblastoma-specific potassium channel alpha subunit KvLQT2) (KQT-like 2) Length = 872 Score = 34.3 bits (77), Expect = 0.22 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 11/92 (11%) Frame = +2 Query: 20 SSQLRHPNSTRKRPPASLISPYRHTRLRSKL------PPLPNPTTRFACHGE-----PGR 166 SSQ + ++R PP + + R+ + +S L PP P+P+ C G PGR Sbjct: 373 SSQTQTYGASRLIPPLNQLELLRNLKSKSGLAFRKDPPPEPSPSKGSPCRGPLCGCCPGR 432 Query: 167 GAARGTVVRPAPSSPSGMKQQGYGGVRFESQR 262 + + ++ SSP G+ +G G + ++ R Sbjct: 433 SSQKVSLKDRVFSSPRGVAAKGKGSPQAQTVR 464
>TSC2_HUMAN (P49815) Tuberin (Tuberous sclerosis 2 protein)| Length = 1807 Score = 33.5 bits (75), Expect = 0.37 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +2 Query: 95 RLRSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGY 235 + RS+ L + ++ GE RG G + +P SPSG++ +GY Sbjct: 1415 KARSQSGTLDGESAAWSASGEDSRGQPEGPLPSSSPRSPSGLRPRGY 1461
>LCP2_MOUSE (Q60787) Lymphocyte cytosolic protein 2 (SH2 domain-containing| leucocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76) Length = 533 Score = 30.8 bits (68), Expect = 2.4 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 16/84 (19%) Frame = +2 Query: 2 SSQDSISSQLRHPNSTRK-------RPPASLIS---PYRHTRLRSKLPPLPNPTTRFAC- 148 ++++++ S + PNS RPP +S P R + LPPLP Sbjct: 151 NNEEALQSSILPPNSFHNTNSMYIDRPPTGKVSQQPPVPPLRPKPALPPLPTGRNHSPLS 210 Query: 149 -----HGEPGRGAARGTVVRPAPS 205 H EP R T PAPS Sbjct: 211 PPHPNHEEPSRSGNNKTAKLPAPS 234
>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)| Length = 317 Score = 30.8 bits (68), Expect = 2.4 Identities = 24/79 (30%), Positives = 31/79 (39%) Frame = +2 Query: 17 ISSQLRHPNSTRKRPPASLISPYRHTRLRSKLPPLPNPTTRFACHGEPGRGAARGTVVRP 196 IS Q+ N + P + Y R + P P P GEPG G A G RP Sbjct: 115 ISGQMSRFNQMLNQIP----NDYHSNRNQPGPPGPPGPPGAAGARGEPGPGGAPGFPGRP 170 Query: 197 APSSPSGMKQQGYGGVRFE 253 P G ++G G + E Sbjct: 171 GVQGPPG--ERGLPGEKGE 187
>DRD4_MOUSE (P51436) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 387 Score = 30.4 bits (67), Expect = 3.2 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 9/75 (12%) Frame = +2 Query: 113 PPLPNPTTRFACHGEP---------GRGAARGTVVRPAPSSPSGMKQQGYGGVRFESQRF 265 PPLP+ T + P G P P PS +++G E + Sbjct: 254 PPLPSLRTSPSDSSRPESELSQRPCSPGCLLADAALPQPPEPSSRRRRGAKITGRERKAM 313 Query: 266 RLLSIVVGCFLISVT 310 R+L +VVG FL+ T Sbjct: 314 RVLPVVVGAFLVCWT 328
>KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (c-erg) (DERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1158 Score = 30.4 bits (67), Expect = 3.2 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 41 NSTRKRPPASLISPYRHTRLRSKLPPLPNPTTR--FACHGEPGRGAARGTVVRPAPSSPS 214 ++ + PP S ++P R R KLP L TTR A G G A G VV SP+ Sbjct: 144 DTNHRGPPTSWLAPGRAKTFRLKLPALLALTTRESSARPGGVGSAGAPGAVVVDVDLSPA 203
>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 531 Score = 30.0 bits (66), Expect = 4.1 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = +2 Query: 2 SSQDSISSQLRHPNSTRKRPPASLISPYRHTR--LRSKLPPLPNPTTRFACHGEPGRGAA 175 SS +I S + T PP + PY H +++K+ L NP RF + P A Sbjct: 27 SSFSAIDSVPASASPTALSPPPPHLMPYDHAAEIIKNKIKKLENPDKRFLKYASPHPILA 86 Query: 176 RGTVVRPAPSS-----PSGMK 223 + AP + P+G++ Sbjct: 87 SHNHILSAPETRVTTLPNGLR 107
>DPOL_ADE40 (P48311) DNA polymerase (EC 2.7.7.7)| Length = 1188 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +2 Query: 335 SIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPR 451 ++VFD P++AWL E + A+ P S F +P+ Sbjct: 1031 NLVFDPKHPELAWLVECETVCAQCGADAYSPESVFLAPK 1069
>CHEB1_PSEAE (O87125) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 368 Score = 30.0 bits (66), Expect = 4.1 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = +2 Query: 32 RHPNSTRKRPPASLISPYRHTRLRSKLPPLPNPTTRF---ACHGEPGRGAARGTVVRPAP 202 R+P+ R+ +++ R R LPPLP+ T+ A G A G PAP Sbjct: 113 RNPDKVRQLLCEKVLTIARSNRRSISLPPLPSATSSSHAPASSSSVGASARVGAGASPAP 172 Query: 203 SSPSGM-KQQGY 235 +S S K++ Y Sbjct: 173 ASTSAAPKRKAY 184
>MBD5_HUMAN (Q9P267) Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding| protein MBD5) Length = 1494 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +2 Query: 8 QDSISSQLRHPNSTRKRPPASLISPYRHTRLRSKLPPLPNP 130 +D + SQ + RK+PP +++S R +++ S P P P Sbjct: 645 RDKLMSQQKDALRKRKQPPTTVLSLLRQSQMDSSAVPKPGP 685
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2160 Score = 30.0 bits (66), Expect = 4.1 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Frame = +2 Query: 62 PASLISPYRHTR------LRSKLPPLPNPTTRFACH------GEPGRGAARGTVVRPAPS 205 P L SP R +RS+ PP+P P A + G PG +R + PAP Sbjct: 803 PRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPVSRFPLEEPAPP 862 Query: 206 SP 211 P Sbjct: 863 GP 864
>TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 407 Score = 29.6 bits (65), Expect = 5.4 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 405 VLAGALRGSSSHAILGL-SVSKTMESGRVERRKVTEMRKQPTTMDSSRKRCDSNRTPP*P 229 VL G +RGS ++ G+ +VS T E R K ++ R CDS PP P Sbjct: 142 VLLGLMRGSGPSSLRGMKAVSYTPEDCRYMNNKACNSVTAVYAHNTQRCSCDSRPYPPPP 201
>SNT2_SCHPO (Q10077) Lid2 complex component snt2 (Lid2C component snt2)| Length = 1131 Score = 29.6 bits (65), Expect = 5.4 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 228 CCFMPDGDDGAGRTTVPLAAPLPGSPWHAKRVVGF 124 CC +P+G+ V + +P PG P+ R++ F Sbjct: 96 CCVLPNGELIQPNDFVLVNSPFPGEPFQIARIISF 130
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 329 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 460 PD ++ + PK+ L+E S ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAG 550
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 329 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 460 PD ++ + PK+ L+E S ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAG 550
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 329 PDSIVFDTLSPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLG 460 PD ++ + PK+ L+E S ++T++P S SP G G Sbjct: 507 PDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAG 550
>BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing protein 3| Length = 1205 Score = 29.3 bits (64), Expect = 7.1 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +2 Query: 356 SPKMAWLEEPRSAPARTAIKTVKPSSSFSSPRGLGRDFLVDIAPKQ 493 +P ++ E P P I KP S F PR + D L++ +P Q Sbjct: 844 APSLSEQESPPEPPTLKPINDSKPPSRFLKPRKVEEDELLEKSPLQ 889
>AREA_EMENI (P17429) Nitrogen regulatory protein areA| Length = 876 Score = 29.3 bits (64), Expect = 7.1 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -3 Query: 348 SKTMESGRVER---RKVTEMRKQPTTMDSSRKRCDS-NRTPP*PCCFMPDGDDGAGRTTV 181 S + S RV + RK + + PT SSR + ++ + +PP MP G G G V Sbjct: 727 SLAVGSSRVSKKSARKNSVQQVTPTAPTSSRAQSNTTSESPP----AMP-GSSGRGSGVV 781 Query: 180 PLAAPLPGSPWHAKRVVGFGNG 115 P+AA P S A G NG Sbjct: 782 PIAAAPPKSSSAATTSPGTNNG 803
>SYD_RHOS4 (Q3IZP1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 591 Score = 29.3 bits (64), Expect = 7.1 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 8/72 (11%) Frame = -3 Query: 306 TEMRKQPTTMDSSRKRCD-------SNRTPP*PCCFMPDGDDGAGRTTVPLAAPL-PGSP 151 TE+R P SRK CD S P F GDDGA PLA + P Sbjct: 323 TEIRAIPAPTGGSRKFCDRMNAFAQSQGLPGMGYIFWRKGDDGAMEAAGPLAKNIGPERT 382 Query: 150 WHAKRVVGFGNG 115 ++ +G G G Sbjct: 383 EAIRQQLGLGEG 394
>SKN1_CANAL (P87024) Beta-glucan synthesis-associated protein SKN1| Length = 737 Score = 29.3 bits (64), Expect = 7.1 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +2 Query: 2 SSQDSISSQLRHPNSTRKRPPASLISPYRHTRLRSKLPPLPNPTTRF 142 +S DS S+QL+ NS R+ PP +P+ + L TRF Sbjct: 37 TSHDSSSTQLQDANSRRQAPPPPPHNPFSDNSHENSTESLYQSETRF 83
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.3 bits (64), Expect = 7.1 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Frame = -3 Query: 396 GALRGSSSHAILGLSVSKTMESGRVERRKV---TEMRKQPTTMDSSRKRCDSNRTPP*PC 226 G++ +SS L S+ +G E+ + T + K P+T S R S+ P Sbjct: 1131 GSIPSASSPTSPALPRSEPPPAGPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPT 1190 Query: 225 CFMPDGDDGAGR--TTVPLAAPLPGSP 151 PDG G G + P +P+P SP Sbjct: 1191 --QPDGAGGGGSSPSPAPATSPVPPSP 1215
>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) Length = 1692 Score = 29.3 bits (64), Expect = 7.1 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 4/72 (5%) Frame = +2 Query: 38 PNSTRKRPPASLISPYRHTRLRSKLPPLPNPTTRFACHGEP----GRGAARGTVVRPAPS 205 P S R PPAS +P H P P P EP RGAA ++ +P Sbjct: 1122 PVSIRGPPPASQPTPSPHLVPSPAPSPGPGPVPSRPPTAEPPPCLRRGAAAADLLSSSPE 1181 Query: 206 SPSGMKQQGYGG 241 S G Q GG Sbjct: 1182 SQHGGTQPPGGG 1193
>TAU_CAPHI (O02828) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 402 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 170 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSAAKSR 203
>VCOM_ADEM1 (O10442) Minor core protein (Protein V) (pV)| Length = 228 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +2 Query: 35 HPNSTRKRPPASLISPYRHTRLRSKLPPLPNPTTRFACHGE 157 HP+ RPPA+ ISP R R R + P P T + E Sbjct: 140 HPSIEVARPPAARISPPRRRR-RRRRSPRPRATAAYRSSAE 179
>TAU_BOVIN (P29172) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 447 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 215 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSAAKSR 248
>HN_NDVM (P12557) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 571 Score = 28.9 bits (63), Expect = 9.2 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -3 Query: 405 VLAGALRGSSSHAILGLSVSKTMESGRVERRKVTEMRKQPTTMDSSRKRCDSNRTP 238 +L+G S SH L L V +T +GRV + + T +RK C + TP Sbjct: 192 ILSGCRDHSQSHQYLALGVLRTSATGRVFFSTLRSINLDDT---QNRKSCSVSATP 244
>GCC_RAT (P20762) Ig gamma-2C chain C region| Length = 329 Score = 28.9 bits (63), Expect = 9.2 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = -3 Query: 357 LSVSKTMESGRVERRKVTEMRKQPTTMDSSRKRCDSNRTPP*PCCFMPDGDDGAGRTTVP 178 LS S T+ S + VT P T + KR + R P P + DD GR +V Sbjct: 64 LSSSVTVPSSTWSSQTVTCSVAHPATKSNLIKRIEPRRPKPRPPTDICSCDDNLGRPSVF 123 Query: 177 LAAPLP 160 + P P Sbjct: 124 IFPPKP 129
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 9.2 Identities = 21/62 (33%), Positives = 23/62 (37%) Frame = +2 Query: 62 PASLISPYRHTRLRSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQGYGG 241 P I P+ R K P LP G PG+ GT PS P G GY G Sbjct: 662 PQGAIGPHGEKGARGK-PGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQG--PLGYPG 718 Query: 242 VR 247 R Sbjct: 719 PR 720
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 519 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSASKSR 552
>TAU_PONPY (Q5S6V2) Microtubule-associated protein tau| Length = 757 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 525 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 558
>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 732 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 500 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSASKSR 533
>TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 757 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 525 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 558
>TAU_SPECI (Q6TS35) Microtubule-associated protein tau| Length = 429 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 197 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSTKSR 230
>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau| Length = 775 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 543 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 576
>TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau| Length = 775 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 543 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 576
>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau| Length = 775 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 101 RSKLPPLPNPTTRFACHGEPGRGAARGTVVRPAPSSPSGMKQQ 229 RS+ P LP P TR EP + A VVR P SPS K + Sbjct: 543 RSRTPSLPTPPTR-----EPKKVA----VVRTPPKSPSSAKSR 576 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,203,115 Number of Sequences: 219361 Number of extensions: 1194059 Number of successful extensions: 5262 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4501 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5248 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
