Clone Name | bart11b02 |
---|---|
Clone Library Name | barley_pub |
>gb|AY107328.1| Zea mays PCO076731 mRNA sequence Length = 1119 Score = 167 bits (84), Expect = 2e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 24 gctgaacgagcggatcctgtcgtcgatctctcgccggtcggtggccgcccacccgaggga 83 |||||||||||| |||||||||||| | || || |||| || ||||| ||||| || | Sbjct: 227 gctgaacgagcgcatcctgtcgtcgctgtcgcggaggtccgtcgccgcgcacccctggca 286 Query: 84 cgaccttgagatcggccccgaggcgccgaccatcttctactgcgtgatcgagatccccaa 143 |||||| |||||||| || || || ||| || ||||| || ||| | |||||| |||| Sbjct: 287 cgacctcgagatcggtcctgaagctccggccgtcttcaacgtcgtcgtggagatcaccaa 346 Query: 144 ggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgt 203 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 347 ggggagcaaggtgaagtacgagctggacaagaagacggggctcatcaaggtggaccggat 406 Query: 204 gctctactcctccgtcgtctacccgcacaactacgg 239 |||||||| |||||||||||||| ||||||||||| Sbjct: 407 cctctactcgtccgtcgtctaccctcacaactacgg 442
>ref|XM_475313.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 131 bits (66), Expect = 1e-27 Identities = 183/222 (82%) Strand = Plus / Plus Query: 24 gctgaacgagcggatcctgtcgtcgatctctcgccggtcggtggccgcccacccgaggga 83 |||||||||| ||||||| |||||| | || || |||| || ||||| |||||| || | Sbjct: 87 gctgaacgagaggatcctctcgtcgctgtcgcggaggtccgtcgccgcgcacccgtggca 146 Query: 84 cgaccttgagatcggccccgaggcgccgaccatcttctactgcgtgatcgagatccccaa 143 |||||| ||||||||||| || || || || | ||| || ||| | |||||| |||| Sbjct: 147 cgacctcgagatcggccctgatgctcccgccgtgttcaacgtcgtcgtggagatcaccaa 206 Query: 144 ggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgt 203 |||||||||||| ||||||||||||||||||||||| |||||||||||||| || || | Sbjct: 207 ggggagcaaggtgaagtacgagctggacaagaagacggggctcatcaaggttgatcggat 266 Query: 204 gctctactcctccgtcgtctacccgcacaactacgggttcat 245 || ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 267 tctatactcgtccgtggtctaccctcacaactacggtttcat 308
>dbj|AK059951.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B08, full insert sequence Length = 1031 Score = 131 bits (66), Expect = 1e-27 Identities = 183/222 (82%) Strand = Plus / Plus Query: 24 gctgaacgagcggatcctgtcgtcgatctctcgccggtcggtggccgcccacccgaggga 83 |||||||||| ||||||| |||||| | || || |||| || ||||| |||||| || | Sbjct: 176 gctgaacgagaggatcctctcgtcgctgtcgcggaggtccgtcgccgcgcacccgtggca 235 Query: 84 cgaccttgagatcggccccgaggcgccgaccatcttctactgcgtgatcgagatccccaa 143 |||||| ||||||||||| || || || || | ||| || ||| | |||||| |||| Sbjct: 236 cgacctcgagatcggccctgatgctcccgccgtgttcaacgtcgtcgtggagatcaccaa 295 Query: 144 ggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgt 203 |||||||||||| ||||||||||||||||||||||| |||||||||||||| || || | Sbjct: 296 ggggagcaaggtgaagtacgagctggacaagaagacggggctcatcaaggttgatcggat 355 Query: 204 gctctactcctccgtcgtctacccgcacaactacgggttcat 245 || ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 356 tctatactcgtccgtggtctaccctcacaactacggtttcat 397
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 99.6 bits (50), Expect = 4e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaag 192 |||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 65432 gagatcaccaaggggagcaaggtgaagtacgagctggacaagaagacggggctcatcaag 65491 Query: 193 gt 194 || Sbjct: 65492 gt 65493 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 24 gctgaacgagcggatcctgtcgtcgatctctcgccggtcggtggccgcccacccgaggga 83 |||||||||| ||||||| |||||| | || || |||| || ||||| |||||| || | Sbjct: 65194 gctgaacgagaggatcctctcgtcgctgtcgcggaggtccgtcgccgcgcacccgtggca 65253 Query: 84 cgaccttgagatcggccc 101 |||||| ||||||||||| Sbjct: 65254 cgacctcgagatcggccc 65271 Score = 44.1 bits (22), Expect = 0.22 Identities = 34/38 (89%) Strand = Plus / Plus Query: 208 tactcctccgtcgtctacccgcacaactacgggttcat 245 ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 65603 tactcgtccgtggtctaccctcacaactacggtttcat 65640
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 99.6 bits (50), Expect = 4e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaag 192 |||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 21348110 gagatcaccaaggggagcaaggtgaagtacgagctggacaagaagacggggctcatcaag 21348169 Query: 193 gt 194 || Sbjct: 21348170 gt 21348171 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 24 gctgaacgagcggatcctgtcgtcgatctctcgccggtcggtggccgcccacccgaggga 83 |||||||||| ||||||| |||||| | || || |||| || ||||| |||||| || | Sbjct: 21347872 gctgaacgagaggatcctctcgtcgctgtcgcggaggtccgtcgccgcgcacccgtggca 21347931 Query: 84 cgaccttgagatcggccc 101 |||||| ||||||||||| Sbjct: 21347932 cgacctcgagatcggccc 21347949 Score = 50.1 bits (25), Expect = 0.004 Identities = 55/65 (84%) Strand = Plus / Minus Query: 190 aaggtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggttcatcccg 249 |||||||||||||||||||| || || || || ||||| |||||||| || ||||| || Sbjct: 709717 aaggtggaccgtgtgctctattcatcagttgtgtaccctcacaactatggattcattcct 709658 Query: 250 cgcac 254 ||||| Sbjct: 709657 cgcac 709653 Score = 44.1 bits (22), Expect = 0.22 Identities = 34/38 (89%) Strand = Plus / Plus Query: 208 tactcctccgtcgtctacccgcacaactacgggttcat 245 ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 21348281 tactcgtccgtggtctaccctcacaactacggtttcat 21348318
>ref|NM_196419.1| Oryza sativa (japonica cultivar-group) putative soluble inorganic pyrophosphatase (OSJNBa0060A14.9), mRNA Length = 588 Score = 85.7 bits (43), Expect = 7e-14 Identities = 100/119 (84%) Strand = Plus / Plus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaag 192 |||||| | ||||||||||| || ||||| ||||| |||||||||||||| | |||||| Sbjct: 175 gagatcacaaaggggagcaaagtgaagtatgagcttgacaagaagactggaatgatcaag 234 Query: 193 gtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggttcatcccgcg 251 || ||| | ||||| ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct: 235 gttgacagggtgctatactcatcggtggtgtacccgcacaactacggtttcataccgcg 293 Score = 42.1 bits (21), Expect = 0.89 Identities = 27/29 (93%) Strand = Plus / Plus Query: 25 ctgaacgagcggatcctgtcgtcgatctc 53 ||||| |||||||||||||||||| |||| Sbjct: 28 ctgaatgagcggatcctgtcgtcgctctc 56
>dbj|AK072672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138M09, full insert sequence Length = 1161 Score = 85.7 bits (43), Expect = 7e-14 Identities = 100/119 (84%) Strand = Plus / Plus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaag 192 |||||| | ||||||||||| || ||||| ||||| |||||||||||||| | |||||| Sbjct: 197 gagatcacaaaggggagcaaagtgaagtatgagcttgacaagaagactggaatgatcaag 256 Query: 193 gtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggttcatcccgcg 251 || ||| | ||||| ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct: 257 gttgacagggtgctatactcatcggtggtgtacccgcacaactacggtttcataccgcg 315 Score = 42.1 bits (21), Expect = 0.89 Identities = 27/29 (93%) Strand = Plus / Plus Query: 25 ctgaacgagcggatcctgtcgtcgatctc 53 ||||| |||||||||||||||||| |||| Sbjct: 89 ctgaatgagcggatcctgtcgtcgctctc 117
>ref|NM_190753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 77.8 bits (39), Expect = 2e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaag 192 |||||| ||||||| |||||||| ||||||||||| |||||||| || ||| |||||| | Sbjct: 163 gagatctccaagggaagcaaggtgaagtacgagctcgacaagaaaacggggttcatcatg 222 Query: 193 gtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggttcatcccgcgc 252 || || || || | ||||| || || || ||||| ||||||||||| |||||||| || Sbjct: 223 gttgatcgggtcttgtactcgtcagtggtttacccccacaactacggcttcatccctcga 282 Query: 253 accctctgcga 263 || |||||||| Sbjct: 283 acgctctgcga 293
>dbj|AK111757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060L20, full insert sequence Length = 1080 Score = 77.8 bits (39), Expect = 2e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaag 192 |||||| ||||||| |||||||| ||||||||||| |||||||| || ||| |||||| | Sbjct: 242 gagatctccaagggaagcaaggtgaagtacgagctcgacaagaaaacggggttcatcatg 301 Query: 193 gtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggttcatcccgcgc 252 || || || || | ||||| || || || ||||| ||||||||||| |||||||| || Sbjct: 302 gttgatcgggtcttgtactcgtcagtggtttacccccacaactacggcttcatccctcga 361 Query: 253 accctctgcga 263 || |||||||| Sbjct: 362 acgctctgcga 372
>gb|AY104537.1| Zea mays PCO143243 mRNA sequence Length = 1221 Score = 69.9 bits (35), Expect = 4e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 112 accatcttctactgcgtgatcgagatccccaaggggagcaaggtcaagtacgagctggac 171 ||||| ||| ||||||| || ||||| || | ||| |||||||| || || || || ||| Sbjct: 345 accatattcaactgcgtcattgagataccaaggggcagcaaggttaaatatgaacttgac 404 Query: 172 aagaagactgggctcatcaaggtggaccgtgtgctctactcctccgtcgtctacccgcac 231 ||||| ||||| || |||||||||||||||||||| || || || || || ||||| ||| Sbjct: 405 aagaaaactggactgatcaaggtggaccgtgtgctgtattcgtcagttgtttaccctcac 464 Query: 232 aactacgggttcatcccgcgcac 254 ||||| || ||||| || ||||| Sbjct: 465 aactatggattcattcctcgcac 487
>ref|NM_099987.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT1G01050 mRNA, complete cds Length = 960 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 ||||||||||| |||||||| ||||| ||||| || ||||||||||| || ||| | ||| Sbjct: 295 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 354 Query: 208 tactcctccgtcgtctacccgcacaacta 236 ||||| || || || ||||| |||||||| Sbjct: 355 tactcatcagttgtgtaccctcacaacta 383
>gb|AY081555.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At1g01050) mRNA, complete cds Length = 805 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 ||||||||||| |||||||| ||||| ||||| || ||||||||||| || ||| | ||| Sbjct: 175 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 234 Query: 208 tactcctccgtcgtctacccgcacaacta 236 ||||| || || || ||||| |||||||| Sbjct: 235 tactcatcagttgtgtaccctcacaacta 263
>gb|AY065201.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At1g01050; T25K16.5) mRNA, complete cds Length = 904 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 ||||||||||| |||||||| ||||| ||||| || ||||||||||| || ||| | ||| Sbjct: 265 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 324 Query: 208 tactcctccgtcgtctacccgcacaacta 236 ||||| || || || ||||| |||||||| Sbjct: 325 tactcatcagttgtgtaccctcacaacta 353
>gb|AY057668.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 917 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 ||||||||||| |||||||| ||||| ||||| || ||||||||||| || ||| | ||| Sbjct: 264 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 323 Query: 208 tactcctccgtcgtctacccgcacaacta 236 ||||| || || || ||||| |||||||| Sbjct: 324 tactcatcagttgtgtaccctcacaacta 352
>gb|AY052717.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 921 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 ||||||||||| |||||||| ||||| ||||| || ||||||||||| || ||| | ||| Sbjct: 261 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 320 Query: 208 tactcctccgtcgtctacccgcacaacta 236 ||||| || || || ||||| |||||||| Sbjct: 321 tactcatcagttgtgtaccctcacaacta 349
>gb|AY085015.1| Arabidopsis thaliana clone 124537 mRNA, complete sequence Length = 953 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 ||||||||||| |||||||| ||||| ||||| || ||||||||||| || ||| | ||| Sbjct: 295 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 354 Query: 208 tactcctccgtcgtctacccgcacaacta 236 ||||| || || || ||||| |||||||| Sbjct: 355 tactcatcagttgtgtaccctcacaacta 383
>gb|BT001144.1| Arabidopsis thaliana At1g01050/T25K16_5 mRNA, complete cds Length = 639 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 ||||||||||| |||||||| ||||| ||||| || ||||||||||| || ||| | ||| Sbjct: 175 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 234 Query: 208 tactcctccgtcgtctacccgcacaacta 236 ||||| || || || ||||| |||||||| Sbjct: 235 tactcatcagttgtgtaccctcacaacta 263
>emb|AM162551.1| Papaver rhoeas mRNA for soluble inorganic pyrophosphatase (p26b gene) Length = 959 Score = 63.9 bits (32), Expect = 2e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 145 gggagcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtg 204 ||||||||||| || || || || ||||| || |||||||||||||||| |||||| | Sbjct: 337 gggagcaaggtgaaatatgaactcgacaaaaaatctgggctcatcaaggttgaccgtata 396 Query: 205 ctctactcctccgtcgtctacccgcacaactacgggttcatccc 248 |||||||| || || || ||||| |||||||| || |||||||| Sbjct: 397 ctctactcatcagttgtgtacccccacaactatggtttcatccc 440
>emb|AJ225172.1|STMDSIP Solanum tuberosum mRNA for magnesium dependent soluble inorganic pyrophosphatase Length = 1102 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 142 aaggggagcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgt 201 |||||||||||||| ||||| || || ||||| || ||||| || |||||||| || ||| Sbjct: 400 aaggggagcaaggtgaagtatgaacttgacaaaaaaactggactgatcaaggttgatcgt 459 Query: 202 gtgctctactcctccgtcgtctacccgcacaactacgggttcatccc 248 || || ||||| || || || ||||| || ||||| ||||||||||| Sbjct: 460 gttctttactcatcagttgtatacccccataactatgggttcatccc 506
>ref|NM_127380.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding / pyrophosphatase AT2G18230 mRNA, complete cds Length = 1000 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 327 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 386 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 387 tcatccattgtgtacccccacaactacggtttcatccc 424
>emb|X57545.1|ATINPYPP A.thaliana mRNA for inorganic pyrophosphatase Length = 976 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 308 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 367 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 368 tcatccattgtgtacccccacaactacggtttcatccc 405
>gb|AY091698.1| Arabidopsis thaliana At2g18230/T30D6.26 mRNA, complete cds Length = 657 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 196 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 255 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 256 tcatccattgtgtacccccacaactacggtttcatccc 293
>gb|AY048209.1| Arabidopsis thaliana At2g18230/T30D6.26 mRNA, complete cds Length = 932 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 262 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 321 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 322 tcatccattgtgtacccccacaactacggtttcatccc 359
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatca 190 |||||| ||||||| |||||||| ||||||||||| |||||||| || ||| |||||| Sbjct: 37516814 gagatctccaagggaagcaaggtgaagtacgagctcgacaagaaaacggggttcatca 37516757 Score = 42.1 bits (21), Expect = 0.89 Identities = 36/41 (87%) Strand = Plus / Minus Query: 223 tacccgcacaactacgggttcatcccgcgcaccctctgcga 263 ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 37516635 tacccccacaactacggcttcatccctcgaacgctctgcga 37516595
>emb|BX819079.1|CNS0A9VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 924 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 310 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 369 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 370 tcatccattgtgtacccccacaactacggtttcatccc 407
>emb|BX819078.1|CNS0A9VU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 908 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 311 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 370 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 371 tcatccattgtgtacccccacaactacggtttcatccc 408
>emb|BX819498.1|CNS0A9SC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 980 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 303 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 362 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 363 tcatccattgtgtacccccacaactacggtttcatccc 400
>emb|BX821249.1|CNS0A9BA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 312 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 371 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 372 tcatccattgtgtacccccacaactacggtttcatccc 409
>gb|AY088579.1| Arabidopsis thaliana clone 8068 mRNA, complete sequence Length = 978 Score = 60.0 bits (30), Expect = 4e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 ||||| ||||||||||| |||||||| | ||| || || ||||| || || || |||||| Sbjct: 328 aaggttaagtacgagctagacaagaacagtggccttattaaggttgatcgcgttctctac 387 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatccc 248 || ||| | || ||||| ||||||||||| |||||||| Sbjct: 388 tcatccattgtgtacccccacaactacggtttcatccc 425
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgggctcatca 190 |||||| ||||||| |||||||| ||||||||||| |||||||| || ||| |||||| Sbjct: 111351 gagatctccaagggaagcaaggtgaagtacgagctcgacaagaaaacggggttcatca 111294 Score = 42.1 bits (21), Expect = 0.89 Identities = 36/41 (87%) Strand = Plus / Minus Query: 223 tacccgcacaactacgggttcatcccgcgcaccctctgcga 263 ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 111172 tacccccacaactacggcttcatccctcgaacgctctgcga 111132
>gb|AY109015.1| Zea mays PCO123317 mRNA sequence Length = 1277 Score = 58.0 bits (29), Expect = 1e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctc 207 |||||||| ||||| ||| ||||||||| |||| || ||||||||||| ||||| || Sbjct: 458 agcaaggttaagtatgagttggacaagatatctggtctgatcaaggtggatcgtgtcctt 517 Query: 208 tactcctccgtcgtctacccgcacaactacgggttcatcccgcgcaccctctg 260 |||||||| || || ||||| || ||||| || ||||| || ||||| ||||| Sbjct: 518 tactcctctgttgtttacccacataactatggtttcattccacgcacactctg 570
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagac 179 |||||||| |||||||||| | |||||||||||| ||||||||||| Sbjct: 1493321 gagatcccgaaggggagcaggaacaagtacgagcttgacaagaagac 1493275
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I, complete sequence Length = 86436 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 148 agcaaggtcaagtacgagctggacaagaagactgggctcatcaaggt 194 ||||||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 32028 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggt 31982
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 54.0 bits (27), Expect = 2e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 149 gcaaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctct 208 ||||||||||||||||| ||||||| ||| ||||| | ||||||||| ||||| Sbjct: 2473746 gcaaggtcaagtacgagttggacaaagagagcgggctgcttcgggtggaccggatgctcc 2473687 Query: 209 actcctccgtcgtctacccgcacaactacgggttcatcccgcgcacc 255 ||||||| |||||||| ||| ||||||||| || || ||||||||| Sbjct: 2473686 actcctcggtcgtctatccggccaactacggctttattccgcgcacc 2473640
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgg 182 |||||| | ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 45753 gagatcacaaaggggagcaaagtgaagtatgagcttgacaagaagactgg 45704 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Minus Query: 202 gtgctctactcctccgtcgtctacccgcacaactacgggttcatcccgcg 251 ||||| ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct: 45564 gtgctatactcatcggtggtgtacccgcacaactacggtttcataccgcg 45515 Score = 42.1 bits (21), Expect = 0.89 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 ctgaacgagcggatcctgtcgtcgatctc 53 ||||| |||||||||||||||||| |||| Sbjct: 46052 ctgaatgagcggatcctgtcgtcgctctc 46024
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgg 182 |||||| | ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 13353376 gagatcacaaaggggagcaaagtgaagtatgagcttgacaagaagactgg 13353327 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Minus Query: 202 gtgctctactcctccgtcgtctacccgcacaactacgggttcatcccgcg 251 ||||| ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct: 13353187 gtgctatactcatcggtggtgtacccgcacaactacggtttcataccgcg 13353138 Score = 42.1 bits (21), Expect = 0.89 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 ctgaacgagcggatcctgtcgtcgatctc 53 ||||| |||||||||||||||||| |||| Sbjct: 13353675 ctgaatgagcggatcctgtcgtcgctctc 13353647
>emb|AJ344157.1|BVU344157 Beta vulgaris mRNA for soluble pyrophosphatase (ppa1 gene) Length = 1041 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 145 gggagcaaggtcaagtacgagctggacaagaagactgg 182 ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 320 gggagcaaggtcaagtatgagcttgacaagaaaactgg 357
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 133 gagatccccaaggggagcaaggtcaagtacgagctggacaagaagactgg 182 |||||| | ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 13360716 gagatcacaaaggggagcaaagtgaagtatgagcttgacaagaagactgg 13360667 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Minus Query: 202 gtgctctactcctccgtcgtctacccgcacaactacgggttcatcccgcg 251 ||||| ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct: 13360527 gtgctatactcatcggtggtgtacccgcacaactacggtttcataccgcg 13360478 Score = 42.1 bits (21), Expect = 0.89 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 ctgaacgagcggatcctgtcgtcgatctc 53 ||||| |||||||||||||||||| |||| Sbjct: 13361015 ctgaatgagcggatcctgtcgtcgctctc 13360987
>ref|XM_475082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 50.1 bits (25), Expect = 0.004 Identities = 106/133 (79%) Strand = Plus / Plus Query: 122 actgcgtgatcgagatccccaaggggagcaaggtcaagtacgagctggacaagaagactg 181 ||||||| || ||||| || | ||| |||||||| || || || || |||||||| |||| Sbjct: 161 actgcgtcattgagattcctaggggcagcaaggttaaatatgaacttgacaagaaaactg 220 Query: 182 ggctcatcaaggtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggt 241 | || || |||||||||||||||||| || || || || ||||| |||||||| || | Sbjct: 221 gactgatagtggtggaccgtgtgctctattcatcagttgtgtaccctcacaactatggat 280 Query: 242 tcatcccgcgcac 254 |||| || ||||| Sbjct: 281 tcattcctcgcac 293
>emb|BX841824.1|CNS09Y67 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 870 Score = 50.1 bits (25), Expect = 0.004 Identities = 70/85 (82%) Strand = Plus / Plus Query: 152 aggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctact 211 ||||||| |||||||| ||||| |||| || ||||||||||| || ||| | ||||||| Sbjct: 258 aggtcaaatacgagcttgacaaagagacaggactcatcaaggttgatcgtattctctact 317 Query: 212 cctccgtcgtctacccgcacaacta 236 | || || || ||||| |||||||| Sbjct: 318 catcagttgtgtaccctcacaacta 342
>dbj|AK069313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014E07, full insert sequence Length = 1163 Score = 50.1 bits (25), Expect = 0.004 Identities = 106/133 (79%) Strand = Plus / Plus Query: 122 actgcgtgatcgagatccccaaggggagcaaggtcaagtacgagctggacaagaagactg 181 ||||||| || ||||| || | ||| |||||||| || || || || |||||||| |||| Sbjct: 402 actgcgtcattgagattcctaggggcagcaaggttaaatatgaacttgacaagaaaactg 461 Query: 182 ggctcatcaaggtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggt 241 | || || |||||||||||||||||| || || || || ||||| |||||||| || | Sbjct: 462 gactgatagtggtggaccgtgtgctctattcatcagttgtgtaccctcacaactatggat 521 Query: 242 tcatcccgcgcac 254 |||| || ||||| Sbjct: 522 tcattcctcgcac 534
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 50.1 bits (25), Expect = 0.004 Identities = 55/65 (84%) Strand = Plus / Minus Query: 190 aaggtggaccgtgtgctctactcctccgtcgtctacccgcacaactacgggttcatcccg 249 |||||||||||||||||||| || || || || ||||| |||||||| || ||||| || Sbjct: 54916 aaggtggaccgtgtgctctattcatcagttgtgtaccctcacaactatggattcattcct 54857 Query: 250 cgcac 254 ||||| Sbjct: 54856 cgcac 54852
>gb|AY574053.1| Populus tomentosa soluble inorganic pyrophosphatase mRNA, complete cds Length = 915 Score = 48.1 bits (24), Expect = 0.014 Identities = 84/104 (80%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 |||||||| || || |||||||||||||| || || |||||||| || || | | ||| Sbjct: 231 aaggtcaaatatgaactggacaagaagacaggactaatcaaggttgatcggattttatac 290 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatcccgcgcac 254 ||||| || ||||| || |||||||| || |||||||| ||||| Sbjct: 291 tcctcagttgtctatccccacaactatggtttcatccctcgcac 334
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 48.1 bits (24), Expect = 0.014 Identities = 24/24 (100%) Strand = Plus / Plus Query: 156 caagtacgagctggacaagaagac 179 |||||||||||||||||||||||| Sbjct: 783449 caagtacgagctggacaagaagac 783472
>gb|AF149116.1|AF149116 Populus tremula x Populus tremuloides soluble inorganic pyrophosphatase (ip1) mRNA, complete cds Length = 950 Score = 48.1 bits (24), Expect = 0.014 Identities = 84/104 (80%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaagactgggctcatcaaggtggaccgtgtgctctac 210 |||||||| || || |||||||||||||| || || |||||||| || || | | ||| Sbjct: 232 aaggtcaaatatgaactggacaagaagacaggactaatcaaggttgatcggattttatac 291 Query: 211 tcctccgtcgtctacccgcacaactacgggttcatcccgcgcac 254 ||||| || ||||| || |||||||| || |||||||| ||||| Sbjct: 292 tcctcagttgtctatccccacaactatggtttcatccctcgcac 335
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.057 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 aaggtcaagtacgagctggacaagaag 177 ||||| ||||||||||||||||||||| Sbjct: 1487724 aaggtgaagtacgagctggacaagaag 1487750 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 cgccggtcggtggccgcccacccg 78 ||||| |||||||||||||||||| Sbjct: 2153679 cgccgctcggtggccgcccacccg 2153702
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 accagcaaggccccggcgctga 28 |||||||||||||||||||||| Sbjct: 3078866 accagcaaggccccggcgctga 3078845
>emb|AJ489171.1|FLA489171 Flavobacterium sp. 92 cdase gene for cyclomaltodextrinase Length = 1860 Score = 44.1 bits (22), Expect = 0.22 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 cgaccttgagatcggccccgaggcgc 109 |||||| ||||||||||||||||||| Sbjct: 234 cgacctcgagatcggccccgaggcgc 259
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 0.89 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 gagatcggccccgaggcgccgacca 115 ||||||| ||||||||||||||||| Sbjct: 199266 gagatcgcccccgaggcgccgacca 199242
>emb|AJ298232.1|CRE298232 Chlamydomonas reinhardtii mRNA for soluble inorganic pyrophosphatase (ppaII gene) Length = 834 Score = 42.1 bits (21), Expect = 0.89 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 caaggtcaagtacgagctggacaag 174 |||||||||||| |||||||||||| Sbjct: 231 caaggtcaagtatgagctggacaag 255
>ref|XM_693258.1| PREDICTED: Danio rerio hypothetical protein LOC569848 (LOC569848), mRNA Length = 3219 Score = 42.1 bits (21), Expect = 0.89 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gagctggacaagaagactggg 183 ||||||||||||||||||||| Sbjct: 1585 gagctggacaagaagactggg 1605
>emb|AL929276.7| Zebrafish DNA sequence from clone CH211-59H6, complete sequence Length = 210630 Score = 42.1 bits (21), Expect = 0.89 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gagctggacaagaagactggg 183 ||||||||||||||||||||| Sbjct: 37240 gagctggacaagaagactggg 37260
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 3.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 ctctcgccggtcggtggccgcccacccg 78 ||||||| |||||| ||||||||||||| Sbjct: 2149384 ctctcgctggtcggcggccgcccacccg 2149357
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gagctggacaagaagactgg 182 |||||||||||||||||||| Sbjct: 120773 gagctggacaagaagactgg 120754
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tcgtcgatctctcgccggtc 62 |||||||||||||||||||| Sbjct: 2501025 tcgtcgatctctcgccggtc 2501044
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete sequence Length = 92861 Score = 40.1 bits (20), Expect = 3.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 205 ctctactcctccgtcgtctacccgcacaactacgggttcatccc 248 |||||||| ||| | || ||||| ||||||||||| |||||||| Sbjct: 82564 ctctactcatccattgtgtacccccacaactacggtttcatccc 82607
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 3.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 3 gaccaccagcaaggccccggcgctgaacgagc 34 ||||| ||||||||| | |||||||||||||| Sbjct: 3597412 gaccagcagcaaggcgctggcgctgaacgagc 3597381 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,286,609 Number of Sequences: 3902068 Number of extensions: 1286609 Number of successful extensions: 23522 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 23128 Number of HSP's gapped (non-prelim): 391 length of query: 270 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 248 effective length of database: 17,147,199,772 effective search space: 4252505543456 effective search space used: 4252505543456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)