ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11b01 |
|---|---|
| Clone Library Name | barley_pub |
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 108 bits (271), Expect = 8e-24 Identities = 50/111 (45%), Positives = 66/111 (59%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGK 375 FECNIC + ++ +V+LCGHLFCWPCL +WL ++ CPVCK+ ++ +K+VP+YGRG Sbjct: 24 FECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGG 83 Query: 376 DRVDPRSKGVPPGAEIPHRPTGQRPATAPQADXXXXXXXXXXXXWFMGGGG 528 D DPR K +P RP GQR PQ+ MGGGG Sbjct: 84 DSSDPRKK-------VPPRPKGQRSEPPPQS---FAGFNWGGDGGMMGGGG 124
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 54.7 bits (130), Expect = 2e-07 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 +C +C Q P T CGH+FCW C+ +W + ECP+C+ LV LY Sbjct: 326 KCTLCLSTRQHPTATPCGHVFCWSCIMEWC---NEKQECPLCRTPNTHSSLVCLY 377
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 53.5 bits (127), Expect = 4e-07 Identities = 22/53 (41%), Positives = 28/53 (52%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 C +C E + P T CGHLFCW C+ W S ECP+C+ KL+ L Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWC---SSKAECPLCREKFPPQKLIYL 322
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 53.5 bits (127), Expect = 4e-07 Identities = 22/53 (41%), Positives = 28/53 (52%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 C +C E + P T CGHLFCW C+ W S ECP+C+ KL+ L Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWC---SSKAECPLCREKFPPQKLIYL 322
>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 306 Score = 53.5 bits (127), Expect = 4e-07 Identities = 21/54 (38%), Positives = 30/54 (55%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 +C++C E P T CGH+FCW C+ W S ECP+C+A K++ L Sbjct: 255 KCSLCMEFIHCPAATECGHIFCWSCINGWT---SKKSECPLCRAFSSPSKIILL 305
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 53.1 bits (126), Expect = 5e-07 Identities = 20/53 (37%), Positives = 31/53 (58%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 C +C ++P CGH+FCW C+ W+ ECP+C+A + E +L+PL Sbjct: 245 CMLCLSPMKDPSCGECGHVFCWKCVLDWV---KERQECPLCRAKMRESQLLPL 294
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 50.1 bits (118), Expect = 4e-06 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK + + L Sbjct: 23 ECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 50.1 bits (118), Expect = 4e-06 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK + + L Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 50.1 bits (118), Expect = 4e-06 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLV 354 EC IC + P++T C H+FC PC+ + +H +CP+C+ + D L+ Sbjct: 753 ECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLCRNEIHGDNLL 804
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 50.1 bits (118), Expect = 4e-06 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCK 65
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 49.7 bits (117), Expect = 6e-06 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCK 65
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 49.7 bits (117), Expect = 6e-06 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCK 65
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 49.7 bits (117), Expect = 6e-06 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCK 65
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 49.7 bits (117), Expect = 6e-06 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK Sbjct: 23 ECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCK 65
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 49.7 bits (117), Expect = 6e-06 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCK 65
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 49.7 bits (117), Expect = 6e-06 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC EL +EP+ T C H+FC C+ K L+ +CP+CK Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCK 65
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 49.3 bits (116), Expect = 7e-06 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLV 354 EC IC + P++T C H+FC PC+ + + +CP+C+ + ED L+ Sbjct: 759 ECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLL 810
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 48.9 bits (115), Expect = 1e-05 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 +C +C +P CGHLFCW CL W PECP+C+ + +++ L Sbjct: 285 KCILCLMNMSDPSCAPCGHLFCWSCLMSWC---KERPECPLCRQHCQPQEILVL 335
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 48.5 bits (114), Expect = 1e-05 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPE---CPVCKAVV 336 + C ICFE P+ ++TLCGH+FC PCL++ ++ + C +C++ V Sbjct: 204 YRCPICFEPPETALMTLCGHVFCCPCLFQMVNSSRTCRQFGHCALCRSKV 253
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 48.1 bits (113), Expect = 2e-05 Identities = 21/50 (42%), Positives = 30/50 (60%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C IC E + P++T C H FC C+ ++L ++SH CP+CKA E L Sbjct: 36 CYICKEFLKAPVITSCNHTFCSHCIREYLIVNSH---CPLCKAEQFESNL 82
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEE-DKLVP 357 F C ICF++ +E +T CGH FC+ C+++ L ++ CP C VV+ D L P Sbjct: 134 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNN---RCPKCNYVVDNIDHLYP 185
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEE-DKLVP 357 F C ICF++ +E +T CGH FC+ C+++ L ++ CP C VV+ D L P Sbjct: 136 FVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNN---RCPKCNYVVDNIDHLYP 187
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 47.4 bits (111), Expect = 3e-05 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 F C++C + P++T C H FC C+ + L + S +CP+C+A +E KL Sbjct: 32 FRCHVCKDFYDSPMLTSCNHTFCSLCIRRCLSVDS---KCPLCRATDQESKL 80
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 47.0 bits (110), Expect = 4e-05 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 C++C E +EP++ CGH FC C+ +W CPVC+ L P Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRP 80
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 47.0 bits (110), Expect = 4e-05 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 C+IC + ++P+ CGH+FC C I + P CP+CK +++ + P++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVW 69
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 47.0 bits (110), Expect = 4e-05 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 C++C E +EP++ CGH FC C+ +W CPVC+ L P Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRP 80
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 47.0 bits (110), Expect = 4e-05 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 C++C E +EP++ CGH FC C+ +W CPVC+ L P Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRP 80
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 47.0 bits (110), Expect = 4e-05 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 C+IC + ++P+ CGH+FC C I + P CP+CK +++ + P++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVW 69
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 47.0 bits (110), Expect = 4e-05 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLV 354 EC IC + P++T C H+FC PC+ + + +CP+C+ + D L+ Sbjct: 756 ECAICLDSLTVPVITHCAHVFCKPCICQCIQNEQPHAKCPLCRNDIHGDNLL 807
>ASR1_ASHGO (Q75DC2) Alcohol-sensitive RING finger protein 1| Length = 328 Score = 46.6 bits (109), Expect = 5e-05 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +1 Query: 199 ECNICFELPQEPIVTL--CGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC+IC+E + L CGH + C+ KW H+HS + CPVC+ Sbjct: 17 ECSICWESMPSGVGRLMPCGHEYHLACIRKWFHLHSGNRSCPVCR 61
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 46.2 bits (108), Expect = 6e-05 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 C+IC + ++P+ CGH+FC C I P CP+CK +++ + P++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 46.2 bits (108), Expect = 6e-05 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 C+IC + ++P+ CGH+FC C I P CP+CK +++ + P++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 46.2 bits (108), Expect = 6e-05 Identities = 19/55 (34%), Positives = 32/55 (58%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 ++C IC + P+ T CGH+FC C+ L + + +CPVC+ V +K++ L Sbjct: 204 YKCVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKVHPNKVICL 258
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 45.8 bits (107), Expect = 8e-05 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C IC E + P++T C H FC C+ +L H P CP C+A +E +L Sbjct: 29 CLICHEYFRAPLITSCSHTFCSFCIRDYLREH---PMCPACRAPEQESRL 75
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 45.8 bits (107), Expect = 8e-05 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 C++C EL +EP+ T CGH FC CL + + CP C+ V + Sbjct: 13 CSVCLELFKEPVTTPCGHNFCTSCLDETWVVQGPPYRCPQCRKVYQ 58
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 45.8 bits (107), Expect = 8e-05 Identities = 19/50 (38%), Positives = 32/50 (64%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C+IC ++ Q P++T CGH FC C+ ++L+ S CP+C A + ++ L Sbjct: 32 CHICKDMLQTPVLTQCGHTFCSLCIREYLNKES---RCPLCLAELRQNML 78
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 C+IC E +EP+ T CGH FC CL + + CP C+AV + Sbjct: 13 CSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQ 58
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 45.1 bits (105), Expect = 1e-04 Identities = 19/50 (38%), Positives = 30/50 (60%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C+IC + + P++T CGH FC C+ +L S+ P+CP+C + E L Sbjct: 27 CHICKDFLKNPVLTPCGHTFCSLCIRGYL---SNEPKCPLCLHELRESML 73
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 F C +C EL +PIV CGHL C+ C++K ++ S CP+C+ Sbjct: 24 FLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRES-HCPICR 66 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 C+ C EL P+V CGH++C C+ S +C C Sbjct: 192 CSACKELLVRPVVLNCGHVYCEGCVVDMAE-ESEKIKCQEC 231
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 44.3 bits (103), Expect = 2e-04 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 C+IC + ++P+ CGH+FC C + P CP+CK ++ + P++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVW 69
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 44.3 bits (103), Expect = 2e-04 Identities = 27/87 (31%), Positives = 38/87 (43%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W HS S CP C+ ++ + V +Y + + Sbjct: 351 CKICAESNKDVKIEPCGHLLCSCCLAAWQ--HSDSQTCPFCRCEIKGWEAVSIY-QFYGQ 407 Query: 382 VDPRSKGVPPGAEIPHRPTGQRPATAP 462 G E GQ P +AP Sbjct: 408 ATAEDSGNSSDQEGRELELGQVPLSAP 434
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 44.3 bits (103), Expect = 2e-04 Identities = 16/50 (32%), Positives = 31/50 (62%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEED 345 F+C++C E+ +P+ T CGH+FC C+ + +++ CP C+A + + Sbjct: 34 FDCSVCLEVLHQPVRTRCGHVFCRSCIATSIK-NNNKWTCPYCRAYLPSE 82
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 43.9 bits (102), Expect = 3e-04 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 C +C L EP+ + C HLFC C+ K +I+S P CP C Sbjct: 310 CQVCDHLLSEPVQSPCRHLFCRSCIAK--YIYSLGPHCPAC 348
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 +EC IC +E + T CGH FC C+ K + H +CPV ++ E++L P Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIRDAGH--KCPVDNEILLENQLFP 119
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 43.5 bits (101), Expect = 4e-04 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C+IC E + P V C H FC CL ++ HS + CPVC+ Sbjct: 23 CSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCR 64
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 43.5 bits (101), Expect = 4e-04 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C+IC E + P V C H FC CL ++ HS + CPVC+ Sbjct: 23 CSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCR 64
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 43.5 bits (101), Expect = 4e-04 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +1 Query: 199 ECNIC-FELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 +C++C FE ++ I++LCGH FC+ C+ K I + CP+C ++P++ Sbjct: 626 KCSVCNFERWKDRIISLCGHGFCYQCIQK--RIETRQRRCPICGRGFGASDVIPIH 679
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 43.5 bits (101), Expect = 4e-04 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 F+C IC P I+T C H+FC C+ + L P CP+C+ + + L Sbjct: 633 FDCPICISPPTNIIITRCAHIFCRACILQTL--QRSKPLCPLCRGSLTQSDL 682
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 +EC IC +E + T CGH FC C+ K + H +CPV ++ E++L P Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIRDAGH--KCPVDNEILLENQLFP 119
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 43.1 bits (100), Expect = 5e-04 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEED 345 F+C +C E+ +P+ T CGH+FC C+ + ++ CP C+A + + Sbjct: 34 FDCAVCLEVLHQPVRTRCGHVFCRSCIA--TSLKNNKWTCPYCRAYLPSE 81
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 43.1 bits (100), Expect = 5e-04 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEED 345 F+C +C E+ +P+ T CGH+FC C+ + ++ CP C+A + + Sbjct: 34 FDCAVCLEVLHQPVRTRCGHVFCRSCIA--TSLKNNKWTCPYCRAYLPSE 81
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSP-ECPVCKAVVEEDKLVP 357 +C IC E+ +EP++ CGH +C CL L H + CPVC+ V+ +P Sbjct: 15 QCPICLEVFKEPLMLQCGHSYCKGCLVS-LSCHLDAELRCPVCRQAVDGSSSLP 67
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 42.7 bits (99), Expect = 7e-04 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 +C +C E+ +EP++ CGH +C CL CPVC+ V+ P Sbjct: 15 QCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSSSSPP 67
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 42.4 bits (98), Expect = 9e-04 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 F C +C E+ ++P+ CGH+FC CL + L P C VC++ + Sbjct: 29 FTCPVCLEVYEKPVQVPCGHVFCSACLQECL--KPKKPVCGVCRSAL 73
>NEUR_DROME (P29503) Protein neuralized| Length = 754 Score = 42.4 bits (98), Expect = 9e-04 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHL-FCWPC-LYKWLHIHSHSPECPVCKAVVEE 342 EC IC+E P + ++ +CGH+ C+ C + +W + +CP+C+AV+ + Sbjct: 700 ECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGV--GGGQCPLCRAVIRD 747
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 42.4 bits (98), Expect = 9e-04 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 F C +C E+ ++P+ CGH+FC CL + L P C VC++ + Sbjct: 27 FTCPVCLEVYEKPVQVPCGHVFCSACLQECL--KPKKPVCGVCRSTL 71
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 42.4 bits (98), Expect = 9e-04 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 F C +C E+ ++P+ CGH+FC CL + L P C VC++ + Sbjct: 27 FTCPVCLEVYEKPVQVPCGHVFCSACLQECL--KPKKPVCGVCRSAL 71
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 42.4 bits (98), Expect = 9e-04 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 F C +C E+ ++P+ CGH+FC CL + L P C VC++ + Sbjct: 27 FTCPVCLEVYEKPVQVPCGHVFCSACLQECL--KPKKPVCGVCRSAL 71
>NEUR_DROVI (Q24746) Protein neuralized| Length = 747 Score = 42.4 bits (98), Expect = 9e-04 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHL-FCWPC-LYKWLHIHSHSPECPVCKAVVEE 342 EC IC+E P + ++ +CGH+ C+ C + +W + +CP+C+AV+ + Sbjct: 693 ECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGV--GGGQCPLCRAVIRD 740
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 42.4 bits (98), Expect = 9e-04 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTL-CGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 C IC E P + L C H FC+ C+ +W+ +P CP+CK VE Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIR---QNPTCPLCKVPVE 51
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 42.4 bits (98), Expect = 9e-04 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTL-CGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 C IC E P + L C H FC+ C+ +W+ +P CP+CK VE Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIR---QNPTCPLCKVPVE 51
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 42.4 bits (98), Expect = 9e-04 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLY-KWLHIHSHSPECPVCKAVVEEDKLVPLYGRGK 375 EC IC E ++ ++T C H C CL W +S S CPVC+ V + +L+ + Sbjct: 793 ECPICLEALEDAVLTPCAHRLCRECLLASWR--NSTSGLCPVCRNTVSKQELITAPTESR 850 Query: 376 DRVD 387 +VD Sbjct: 851 FQVD 854
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 42.0 bits (97), Expect = 0.001 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 F C +C E+ ++P+ CGH+FC CL + L P C VC++ + Sbjct: 28 FTCPVCLEVFEKPVQVPCGHVFCSACLQECL--KPKKPVCGVCRSAL 72
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 42.0 bits (97), Expect = 0.001 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 F C +C E+ ++P+ CGH+FC CL + L P C VC++ + Sbjct: 28 FTCPVCLEVFEKPVQVPCGHVFCSACLQECL--KPKKPVCGVCRSAL 72
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 41.6 bits (96), Expect = 0.002 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKW 285 EC +C ++ +EP+ T CGH+FC CL W Sbjct: 17 ECKLCGQVLEEPLCTPCGHVFCASCLLPW 45
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYK-WLHIHSHSPECPVCKAVVEEDK 348 C +C L +EP++ CGH FC C+ K W + S CP CK V+ E K Sbjct: 162 CPLCRSLFKEPVILECGHNFCKHCIDKSWESASAFS--CPECKEVLTERK 209
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 F C IC ++ ++ +T CGH FC+ C+ H+ + S +CP C + L P Sbjct: 45 FLCPICMQIIKDAFLTACGHSFCYMCII--THLRNKS-DCPCCGHYLTNSNLFP 95
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLY-KWLHIHSHSPE---CPVCKAVVEEDKLV 354 EC IC E +P++T C H C CL W SP CP+C+ +++ +L+ Sbjct: 1039 ECPICLESADDPVLTPCAHRMCRECLLTSW-----RSPSCGLCPICRTILKRTELI 1089
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/52 (32%), Positives = 30/52 (57%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 C IC ++ ++ +T CGH FC+ C+ H+ + S +CP C + ++L P Sbjct: 52 CPICMQIIKDAFLTACGHSFCYMCII--THLRNKS-DCPCCSQHLTNNQLYP 100
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWL-----HIHSHSPECPVCK 327 F+C+IC E + P CGHLFCW C+ + + S CP C+ Sbjct: 253 FQCSICLE-NKNPSALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCR 300
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCL---YKWLHIHSHSPECPVCKAVVEEDKLVP 357 C IC EL +P+ CGH FC CL +K + CPVC+ + + + P Sbjct: 15 CPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRP 69
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 41.2 bits (95), Expect = 0.002 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 +C IC E+ +EP++ CGH +C CL CPVC+ V+ Sbjct: 15 QCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVD 61
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/67 (31%), Positives = 30/67 (44%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W S CP C+ ++ + + + D Sbjct: 381 CKICAENDKDVKIEPCGHLMCTSCLTSWQ--ESEGQGCPFCRCEIKGTEPIVV-----DP 433 Query: 382 VDPRSKG 402 DPR G Sbjct: 434 FDPRGSG 440
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/67 (31%), Positives = 30/67 (44%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W S CP C+ ++ + + + D Sbjct: 379 CKICAENDKDVKIEPCGHLMCTSCLTSWQ--ESEGQGCPFCRCEIKGTEPIVV-----DP 431 Query: 382 VDPRSKG 402 DPR G Sbjct: 432 FDPRGSG 438
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIH----SHSPECPVCK 327 C IC +EP+ CGH FC CL ++ I SP CP+CK Sbjct: 16 CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCK 61
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIH----SHSPECPVCK 327 C IC +EP+ CGH FC CL ++ I SP CP+CK Sbjct: 16 CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCK 61
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLV 354 C +C L +P+ + C HLFC C+ + + H+ P CP C + L+ Sbjct: 296 CQVCDHLLSDPVQSPCRHLFCRLCIIR--YTHALGPNCPTCNQHLNPSHLI 344
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 41.2 bits (95), Expect = 0.002 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 F C+ C+++ P CGH FC CL W S ECP C+ Sbjct: 32 FSCHCCYDILVNPTTLNCGHSFCRHCLALW-WASSKKTECPECR 74
>TRI10_PIG (O19085) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 482 Score = 40.8 bits (94), Expect = 0.003 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHI----HSHSPECPVCK 327 C IC +EP+ CGH FC CL ++L I P CP+CK Sbjct: 16 CPICQGTLREPVTIDCGHNFCCVCLTRYLEIPCLDPGELPTCPLCK 61
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 40.8 bits (94), Expect = 0.003 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 F C+ C++ P CGH FC CL W + S ECP C+ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALW-WMSSKKTECPECR 74
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 40.8 bits (94), Expect = 0.003 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 F C+ C++ P CGH FC CL W + S ECP C+ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALW-WMSSKKTECPECR 74
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/45 (44%), Positives = 23/45 (51%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKA 330 F C IC + Q PIVT CGH FC C L + +P C C A Sbjct: 239 FACIICKKPYQNPIVTKCGHYFCESCA---LQRYRKNPSCAACGA 280
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDK 348 C +C EL ++P++ CGH FC C+ K S S CP CK + + K Sbjct: 146 CPLCVELFKDPVMVACGHNFCRSCIDKVWEGQS-SFACPECKESITDRK 193
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W S CP C+ ++ + + + D Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQ--ESDGQGCPFCRCEIKGTEPIIV-----DP 425 Query: 382 VDPRSKG 402 DPR +G Sbjct: 426 FDPRDEG 432
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 40.4 bits (93), Expect = 0.003 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C IC ++ Q+P+ CGH FC C+ + +CP+CK V ++ + Sbjct: 16 CPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAI 65
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)| Length = 250 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 +C IC E+ +E ++ CGH +C CL + CP+C VV+ +P Sbjct: 15 QCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLP 67
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 +C IC E+ +E ++ CGH +C CL + CP+C VV+ +P Sbjct: 15 QCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLP 67
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 40.4 bits (93), Expect = 0.003 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 C+IC + + P++T CGH FC C+ L ++ P CP+C Sbjct: 28 CHICKDFLKVPVLTPCGHTFCSLCIRTHL---NNQPNCPLC 65
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W S CP C+ ++ + + + D Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQ--ESDGQGCPFCRCEIKGTEPIIV-----DP 425 Query: 382 VDPRSKG 402 DPR +G Sbjct: 426 FDPRDEG 432
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W S CP C+ ++ + + + D Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQ--ESDGQGCPFCRCEIKGTEPIIV-----DP 425 Query: 382 VDPRSKG 402 DPR +G Sbjct: 426 FDPRDEG 432
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 40.0 bits (92), Expect = 0.004 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 +C IC E+ +EP++ CGH +C CL CPVC+ V+ Sbjct: 15 QCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVD 61
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 40.0 bits (92), Expect = 0.004 Identities = 18/50 (36%), Positives = 29/50 (58%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C+IC + + ++T CGH FC C+ K+L S +CP+C + + E L Sbjct: 32 CHICKDFLKASVLTPCGHSFCSICIRKYLQKES---KCPLCLSDLTESML 78
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 40.0 bits (92), Expect = 0.004 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C +C + P++T C H FC C+ + L S +CP C++ +E KL Sbjct: 30 CQVCKDFFDNPVITSCSHTFCSLCIRRCL---STEGKCPACRSSDQELKL 76
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 40.0 bits (92), Expect = 0.004 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 6/74 (8%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE-----EDKLV-P 357 F C IC + +P+VT CGH FC C K SP+C C A + DK++ Sbjct: 235 FACLICRQPFTQPVVTKCGHYFCMGCAAKRF---QKSPKCYACGAPTQGIFNIADKVIAK 291 Query: 358 LYGRGKDRVDPRSK 399 + R K R + R + Sbjct: 292 IEARNKARREAREE 305
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 7/62 (11%) Frame = +1 Query: 196 FECNICFELPQEPI----VTLCGHLFCWPCLYKWLHIHSH---SPECPVCKAVVEEDKLV 354 FEC IC EP+ +T C H FC PCL +++ + S CP C+ + E ++ Sbjct: 856 FECAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVL 915 Query: 355 PL 360 L Sbjct: 916 KL 917
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 40.0 bits (92), Expect = 0.004 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 C+IC E P++T CGH FC C+ ++L + S CP C Sbjct: 28 CHICKEFFTAPMITGCGHTFCSLCIQRYL--TNTSQRCPTC 66
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 40.0 bits (92), Expect = 0.004 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C +C + P++T C H FC C+ + L S +CP C++ +E KL Sbjct: 30 CQVCKDFFDNPVITSCSHTFCSLCIRRCL---STEGKCPTCRSSDQELKL 76
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 39.7 bits (91), Expect = 0.006 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPE----CPVCKAVVEEDKL 351 C IC E +E + T CGHLFC CL + H+ S CP+C+ E+ L Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQ--HVEKASASGVFCCPLCRKPCSEEVL 65
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 39.3 bits (90), Expect = 0.008 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKA 330 F C IC + PIVT CGH FC C L + +P C C A Sbjct: 251 FACIICKSSYKSPIVTKCGHYFCESCA---LQRYRKNPSCAACGA 292
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 39.3 bits (90), Expect = 0.008 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPE-----CPVCKAVVEE 342 C IC E +E + T CGHLFC CL + H+ S CP+C+ EE Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQ--HVEKASASGVFCCCPLCRKPSEE 63
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 39.3 bits (90), Expect = 0.008 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 F C +C + P+VT C H FC C K + + S CP+C Sbjct: 169 FRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKV---STNCPIC 208
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDK 348 C +C EL ++P++ CGH FC C+ K S S CP C+ + + K Sbjct: 145 CPLCVELFKDPVMVACGHNFCRSCIDKAWEGQS-SFACPECRESITDRK 192
>PSH1_YEAST (Q12161) RING finger protein PSH1 (POB3/SPT16 histone-associated| protein 1) Length = 406 Score = 39.3 bits (90), Expect = 0.008 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSP-ECPVCKA 330 C+IC + P++T CGH +C+ CL W ++ CP C++ Sbjct: 30 CSICHDYMFVPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRS 73
>TRIM3_HUMAN (O75382) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) (RING finger protein 97) Length = 744 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C+IC + Q P V C H FC CL ++ S + CPVC+ Sbjct: 22 CSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCR 63
>ZN179_RAT (O70418) Zinc finger protein 179 (Brain finger protein)| Length = 631 Score = 38.9 bits (89), Expect = 0.010 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDK 348 C+IC E +EPI CGH FC C P CP C+ + ++ K Sbjct: 57 CSICLERLREPISLDCGHDFCIRCFSTHRIPGCELPCCPECRKICKQKK 105
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 38.9 bits (89), Expect = 0.010 Identities = 20/66 (30%), Positives = 30/66 (45%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W S CP C+ ++ + + + D Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQ--ESDGQGCPFCRCEIKGTEPIVV-----DP 436 Query: 382 VDPRSK 399 DPR + Sbjct: 437 FDPRDE 442
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 38.9 bits (89), Expect = 0.010 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLH----IHSHSPECPVCKAVVEEDKLVP 357 C IC EL EP+ CGH FC C+ + I CPVC+ + L P Sbjct: 15 CPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRP 70
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 38.9 bits (89), Expect = 0.010 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKA 330 C IC + ++P + C H FC+PCL + +CP C+A Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRA 85
>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 38.9 bits (89), Expect = 0.010 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 9/54 (16%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWL--HIHSHSP-------ECPVCKAVV 336 C IC EL ++P++ C H C+ C ++ L H ++ P +CP C+ V+ Sbjct: 10 CPICLELLEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCRHVI 63
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 38.9 bits (89), Expect = 0.010 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKA 330 F C +C + EP + CGH +C C+ L+I+ +CP+C+A Sbjct: 6 FCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINE---KCPLCRA 47
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 38.5 bits (88), Expect = 0.013 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C +C++ ++ + CGH FC C+ + + SP CPVCK Sbjct: 21 CAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQV-SPTCPVCK 61
>TRI43_HUMAN (Q96BQ3) Tripartite motif protein 43| Length = 446 Score = 38.5 bits (88), Expect = 0.013 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCL-YKWLHIHSHSPECPVCK 327 C IC +P+ CGH FC PCL W S + CP C+ Sbjct: 15 CVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPA-NCPACR 56
>ATL3A_ARATH (Q9SRQ8) RING-H2 finger protein ATL3A| Length = 356 Score = 38.5 bits (88), Expect = 0.013 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYG 366 +C++C QE ++ C H F PC+ WL HS+ CP+C+A + V + Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSN---CPLCRAFIVTSSAVEIVD 214 Query: 367 RGKDRVDPRSKGVPPG 414 ++ + + G Sbjct: 215 LTNQQIVTENNSISTG 230
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 38.5 bits (88), Expect = 0.013 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 7/52 (13%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPV-------CKAVV 336 C+IC ++P++ + H+FC C+ WL +S P C V CK ++ Sbjct: 18 CHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACRVPITPENPCKEII 69
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 38.5 bits (88), Expect = 0.013 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 7/52 (13%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPV-------CKAVV 336 C+IC ++P++ + H+FC C+ WL +S P C V CK ++ Sbjct: 18 CHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACRVPITPENPCKEII 69
>TRI18_MOUSE (O70583) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Midin) Length = 680 Score = 38.5 bits (88), Expect = 0.013 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 9/54 (16%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWL--HIHSHSP-------ECPVCKAVV 336 C IC EL ++P++ C H C+ C ++ L H ++ P +CP C+ V+ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCRHVI 63
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 38.5 bits (88), Expect = 0.013 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 +C IC E E + C H FC C+ +W+ ECP+C+ +E Sbjct: 405 QCIICSEYFIEAVTLNCAHSFCSFCINEWM---KRKVECPICRKDIE 448
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 38.5 bits (88), Expect = 0.013 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%) Frame = +1 Query: 199 ECNICFELPQE---PIVTLCGHLFCWPCLYKWLHIHSHSP---ECPVCKAVVEEDKLVPL 360 EC+IC P + + T CGH FC CL++++ + +CP C+ ++ +L+ L Sbjct: 913 ECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGLKCPNCRNQIDACRLLAL 972
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 38.5 bits (88), Expect = 0.013 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 C IC E ++ + CGHL C CL W S S CP C+ ++ + V + Sbjct: 350 CKICAERDKDVRIEPCGHLLCSCCLAAWQ--DSDSQTCPFCRCEIKGREAVSI 400
>TRI18_RAT (P82458) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 38.5 bits (88), Expect = 0.013 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 9/54 (16%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWL--HIHSHSP-------ECPVCKAVV 336 C IC EL ++P++ C H C+ C ++ L H ++ P +CP C+ V+ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCRHVI 63
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 38.5 bits (88), Expect = 0.013 Identities = 20/66 (30%), Positives = 30/66 (45%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC E ++ + CGHL C CL W S CP C+ ++ + + + D Sbjct: 386 CKICAENDKDVKIEPCGHLMCTSCLTSWQ--ESDGQGCPFCRCEIKGTEPIIV-----DP 438 Query: 382 VDPRSK 399 DPR + Sbjct: 439 FDPRDE 444
>TRC8_DROME (Q7KRW1) Protein TRC8 homolog| Length = 809 Score = 38.1 bits (87), Expect = 0.017 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC++ +T C H F CL KWL++ CP+C ++ +Y D Sbjct: 621 CAICYQEMYSAKITRCRHFFHGVCLRKWLYVQD---RCPLCHEIM-------MYTDKADE 670 Query: 382 VDPRSKGVPPG-AEIPHR 432 P ++ P AE P R Sbjct: 671 NAPEAEPAPAAQAEQPMR 688
>TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Putative transcription factor XPRF) (Midin) (RING finger protein 59) (Midline 1 RING finger protein) Length = 667 Score = 38.1 bits (87), Expect = 0.017 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 9/54 (16%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPE---------CPVCKAVV 336 C IC EL ++P++ C H C+ C ++ L H + E CP C+ V+ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCRHVI 63
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 38.1 bits (87), Expect = 0.017 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Frame = +1 Query: 199 ECNICFELP---QEPIVTLCGHLFCWPCLYKWLHIHSHSPE---CPVCKAVVEEDKL 351 EC+IC ++P E +VT C H FC C+ + L + CP C++ + + +L Sbjct: 815 ECSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPISKYQL 871
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of| Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1066 Score = 37.7 bits (86), Expect = 0.022 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWL 288 +C +C ++ ++P+ T CGH+FC C+ W+ Sbjct: 17 KCALCHKVLEDPLTTPCGHVFCAGCVLPWV 46
>TRI10_MOUSE (Q9WUH5) Tripartite motif protein 10 (RING finger protein 9)| (Hematopoietic RING finger 1) Length = 489 Score = 37.7 bits (86), Expect = 0.022 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHI----HSHSPECPVCK 327 C IC +EP+ CGH FC CL ++ I S CP+CK Sbjct: 16 CPICQGTLREPVTIDCGHNFCRGCLTRYCEIPGPESEESLSCPLCK 61
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (LMP1-associated protein) (LAP1) (CAP-1) Length = 568 Score = 37.7 bits (86), Expect = 0.022 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 ++C C + P T CGH FC C+ L S SP+C C+ + +DK+ Sbjct: 51 YKCEKCHLVLCSPKQTECGHRFCESCMAALL--SSSSPKCTACQESIVKDKV 100
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 37.7 bits (86), Expect = 0.022 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYK-WLHIHSHSPECPVCKAVVEEDKLVPLY--GRG 372 C IC + Q+P+ CGH FC CL++ W P CP C+ L P + R Sbjct: 12 CPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFP-CPECRHPSAPAALRPNWALARL 70 Query: 373 KDRVDPRSKG-VPPG 414 ++ R G VPPG Sbjct: 71 TEKTQRRRLGPVPPG 85
>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1062 Score = 37.7 bits (86), Expect = 0.022 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWL 288 +C +C ++ ++P+ T CGH+FC C+ W+ Sbjct: 17 KCALCHKVLEDPLTTPCGHVFCAGCVLPWV 46
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 37.7 bits (86), Expect = 0.022 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 9/61 (14%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLY---------KWLHIHSHSPECPVCKAVVEEDKLV 354 C+IC + +P++T CGH FC C+ K S CP C+ + + L+ Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQRNLL 75 Query: 355 P 357 P Sbjct: 76 P 76
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 37.7 bits (86), Expect = 0.022 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKA 330 C +C + ++P++T CGH FC C K S +CPV A Sbjct: 55 CQLCCSVFKDPVITTCGHTFCRRCALK-------SEKCPVDNA 90
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 37.7 bits (86), Expect = 0.022 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCL-YKWLHIHSH-------SPECPVCK 327 F C IC E +EP+ CGH FC CL W H + + CP+C+ Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAARCPLCQ 58
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 37.7 bits (86), Expect = 0.022 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C IC +L P+ T C H +C C+ ++L CP+CK V E L Sbjct: 29 CYICKDLLNAPVRTQCDHTYCSQCIREFL---LRDNRCPLCKTEVFESGL 75
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 37.7 bits (86), Expect = 0.022 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 F+C IC + Q P+VT C H FC C + H + +P C VC Sbjct: 260 FKCFICRQTFQNPVVTKCRHYFCESCALQ--HFRT-TPRCYVC 299
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 37.7 bits (86), Expect = 0.022 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 7/52 (13%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPV-------CKAVV 336 C+IC ++P+V H+FC C+ WL +S P C V CK ++ Sbjct: 18 CHICLGKVRQPVVCTNNHVFCSICIDLWLKNNSQCPACRVPITPENPCKEII 69
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 37.7 bits (86), Expect = 0.022 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 5/82 (6%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGK-- 375 C IC + +P++T CGH FC C+ + CP C+ + + L P K Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSAQRNLRPNRPLAKMA 75 Query: 376 ---DRVDPRSKGVPPGAEIPHR 432 R+ P S VP G HR Sbjct: 76 EMARRLHPPSP-VPQGVCAAHR 96
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 37.7 bits (86), Expect = 0.022 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 C IC E ++ + CGHL C CL W S CP C+ ++ Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQ--ESDGQGCPFCRCEIK 427
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 37.7 bits (86), Expect = 0.022 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWL 288 +C +C ++ ++P+ T CGH+FC C+ W+ Sbjct: 17 KCALCHKVLEDPLTTPCGHVFCAGCVLPWV 46
>PEX10_PICPA (Q92265) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PAS7) Length = 419 Score = 37.7 bits (86), Expect = 0.022 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKW 285 +C +C P CGH FCW C+ W Sbjct: 297 QCMLCLSYMTNPTAANCGHCFCWSCIIDW 325
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 37.4 bits (85), Expect = 0.029 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE-----EDKLVPL 360 F+C +C E + P+ T CGH FC C + I C +C E LVP+ Sbjct: 163 FKCVLCKESYERPVKTNCGHYFCQKCFVNRIKI---DKSCFICGENTEGIAKMATDLVPM 219 Query: 361 YGRGKDR 381 KD+ Sbjct: 220 DNANKDK 226
>RHA4A_ARATH (Q84TF5) RING-H2 zinc finger protein RHA4a| Length = 174 Score = 37.4 bits (85), Expect = 0.029 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Frame = +1 Query: 202 CNIC---FELPQEPI-VTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 C +C FEL +E + + LC H+F C++ WL+ H+ CP+C++ V Sbjct: 105 CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHN---TCPLCRSSV 150
>TRAF5_MOUSE (P70191) TNF receptor-associated factor 5| Length = 558 Score = 37.4 bits (85), Expect = 0.029 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 ++C C + P T CGH FC C+ ++S P CPV K V++ ++ Sbjct: 43 YKCAFCHSVLHNPHQTGCGHRFCQQCIRSLRELNS-VPICPVDKEVIKPQEV 93
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 37.4 bits (85), Expect = 0.029 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYK 282 F+C +C E + P+VT CGH FC C K Sbjct: 197 FKCTLCKEDYKSPVVTNCGHYFCGSCFAK 225
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 37.4 bits (85), Expect = 0.029 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C +C++ ++ + CGH FC C+ + + +P CPVCK Sbjct: 21 CAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQT-TPSCPVCK 61
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 37.4 bits (85), Expect = 0.029 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 8/52 (15%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCL-YKWLHIHSHS-------PECPVCK 327 F C IC E +EP+ CGH FC CL W H + CP+C+ Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGALWPHRSAGGTGGSGGPARCPLCQ 58
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 37.4 bits (85), Expect = 0.029 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 F+C IC + Q P+VT C H FC C + H + +P C VC Sbjct: 260 FKCFICRQSFQNPVVTKCRHYFCESCALQ--HFRT-TPRCYVC 299
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 37.4 bits (85), Expect = 0.029 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKDR 381 C IC + +P++T CGH FC C+ + CP C+ + + L P R + Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQRNLRP--NRPLAK 73 Query: 382 VDPRSKGVPPGAEIPHR--PTGQRPATA 459 + ++ + P + +P P + P A Sbjct: 74 MAEMARRLHPPSPVPQGVCPAHREPLAA 101
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 37.4 bits (85), Expect = 0.029 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPV 321 C +C + ++P++T CGH FC C K S +CPV Sbjct: 131 CQLCCSVFKDPVITTCGHTFCRRCALK-------SEKCPV 163
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 37.4 bits (85), Expect = 0.029 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = +1 Query: 199 ECNICFELPQEPIV----TLCGHLFCWPCLYKWLHIHSHSPE---CPVCKAVVEEDKLVP 357 EC+IC P+ T CGH FC CL +++ + CP C+A VE L+ Sbjct: 831 ECSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNCRAAVESRYLLK 890 Query: 358 L 360 L Sbjct: 891 L 891
>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (dTopors) Length = 1038 Score = 37.0 bits (84), Expect = 0.038 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 202 CNICFELPQEPIVT-LCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C IC + T C H FC+ CL +W I PECP+CK Sbjct: 102 CAICLSRCRRKCFTDSCMHQFCFKCLCEWSKI---KPECPLCK 141
>ZN179_HUMAN (Q9ULX5) Zinc finger protein 179 (Brain finger protein) (RING| finger protein 112) Length = 632 Score = 37.0 bits (84), Expect = 0.038 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDK 348 C+IC E ++PI CGH FC C P CP C+ + ++ + Sbjct: 57 CSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKR 105
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 37.0 bits (84), Expect = 0.038 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLY----KWLHIHSHSPECPVCKAVVEEDKLVP 357 C IC EL EP+ CGH FC C+ + CPVC+ + L P Sbjct: 15 CPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCRTSYQPGNLRP 70
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 37.0 bits (84), Expect = 0.038 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 +C IC E E + C H FC C+ +W+ ECP+C+ Sbjct: 402 QCIICSEYFIEAVTLNCAHSFCSYCINEWM---KRKIECPICR 441
>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G| Length = 362 Score = 37.0 bits (84), Expect = 0.038 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 +C++C +E ++ C H F PC+ WL HS+ CP+C+A V Sbjct: 141 DCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSN---CPLCRAFV 187
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 37.0 bits (84), Expect = 0.038 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 F C IC + Q P+VT C H FC C + H + +P C +C Sbjct: 254 FRCFICRQAFQNPVVTKCRHYFCESCALE--HFRA-TPRCYIC 293
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 37.0 bits (84), Expect = 0.038 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C+IC + + P V C H FC CL ++ S + CPVC+ Sbjct: 22 CSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCR 63
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 37.0 bits (84), Expect = 0.038 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C+IC + + P V C H FC CL ++ S + CPVC+ Sbjct: 22 CSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCR 63
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 36.6 bits (83), Expect = 0.049 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPE---------CPVCKAVV 336 C IC EL ++P++ C H C+ C ++ L S E CP C+ V+ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQCPTCRYVI 63
>TRAF5_HUMAN (O00463) TNF receptor-associated factor 5 (RING finger protein 84)| Length = 557 Score = 36.6 bits (83), Expect = 0.049 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 ++C C + P T CGH FC C+ +++ P CPV K V++ ++ Sbjct: 43 YKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNT-VPICPVDKEVIKSQEV 93
>SAN1_YEAST (P22470) Protein SAN1| Length = 610 Score = 36.6 bits (83), Expect = 0.049 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 232 PIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEE 342 PI CGH+F C+YKW + + CP+C+ + E Sbjct: 252 PIKLPCGHIFGRECIYKWSRLEN---SCPLCRQKISE 285
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 36.6 bits (83), Expect = 0.049 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C +C + +P+ T C HLFC C+ K++ + CP CK Sbjct: 294 CLVCEHILSDPVQTSCKHLFCRICILKYIKL--MGCYCPSCK 333
>RN139_HUMAN (Q8WU17) RING finger protein 139 (Translocation in renal carcinoma| on chromosome 8) Length = 664 Score = 36.6 bits (83), Expect = 0.049 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +1 Query: 202 CNICF-ELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC--KAVVEED 345 C IC+ E +T C H F CL KWL+I CP+C K +E+D Sbjct: 547 CAICYHEFTTSARITPCNHYFHALCLRKWLYIQD---TCPMCHQKVYIEDD 594
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 36.6 bits (83), Expect = 0.049 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCL---YKWLHIHSHSPECPVCK 327 C IC EL +EP+ C H FC C+ Y+ CPVC+ Sbjct: 15 CPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCR 59
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 36.6 bits (83), Expect = 0.049 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 ++C C + P T CGH FC C+ L S SP+C C+ + +DK+ Sbjct: 50 YKCEKCRLVLCNPKQTECGHRFCESCMAALL--SSSSPKCTACQESIIKDKV 99
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 36.6 bits (83), Expect = 0.049 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPE---------CPVCKAVV 336 C IC EL ++P++ C H C+ C ++ L S E CP C+ V+ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQCPTCRYVI 63
>PEX12_DROME (Q9VPT5) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 297 Score = 36.6 bits (83), Expect = 0.049 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +1 Query: 199 ECNICFELPQEPIV-TLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 EC +C Q P ++ G++FCW C+ H+ H CPV + D LV +Y Sbjct: 243 ECPVCLLSIQTPTACSVSGYVFCWKCIVS--HMKEHG-TCPVTHYPISLDDLVRIY 295
>ARI1_DROME (Q94981) Protein ariadne-1 (Ari-1)| Length = 503 Score = 36.6 bits (83), Expect = 0.049 Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%) Frame = +1 Query: 199 ECNICF-ELPQEPIVTL-CGHLFCWPCLYKWL 288 EC ICF +LP + + L CGH FC PC +++L Sbjct: 132 ECEICFSQLPPDSMAGLECGHRFCMPCWHEYL 163 Score = 31.2 bits (69), Expect = 2.1 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 26/75 (34%) Frame = +1 Query: 199 ECNICFELPQ-EP--IVTLCGHLFCWPC------------LYKWLH-----------IHS 300 +C ++P EP + CGH+FC+ C L KW+ I + Sbjct: 227 DCTYAVKVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCDDDSETSNWIAA 286 Query: 301 HSPECPVCKAVVEED 345 ++ ECP C +E+D Sbjct: 287 NTKECPRCSVTIEKD 301
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 36.6 bits (83), Expect = 0.049 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSP--ECPVCKAVVEEDKL 351 C IC + +E + T C HLFC CL + + S S CPVC+ E L Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKPCSETVL 63
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 36.2 bits (82), Expect = 0.064 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 EC IC + + ++ C H FC C+ KW S CPVC+ V Sbjct: 146 ECCICMD-GKADLILPCAHSFCQKCIDKW---SGQSRNCPVCRIQV 187
>YQDA_CAEEL (Q09268) Hypothetical RING finger protein C32D5.10 in chromosome II| Length = 610 Score = 36.2 bits (82), Expect = 0.064 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 199 ECNICF-ELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 EC++C E+ ++ C H FC+ C+ WL P CP+CK V Sbjct: 40 ECSVCKNEIIDTTSLSDCCHEFCYDCIVGWL-TKGSGPFCPMCKTPV 85
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 36.2 bits (82), Expect = 0.064 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCL----YKWLHIHSHSPECPVCKAVVEEDKLVP 357 C IC EL EP+ CGH FC C+ + + CPVC+ + L P Sbjct: 15 CPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRP 70
>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting| protein) (RING finger protein 90) Length = 511 Score = 36.2 bits (82), Expect = 0.064 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCL 276 C+IC EL +EP+ CGH FC C+ Sbjct: 29 CSICLELFREPVSVECGHSFCRACI 53
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 36.2 bits (82), Expect = 0.064 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC 324 C IC + +P+ T C H+FC C+ + L + S CP C Sbjct: 293 CQICEHILADPVETSCKHVFCRICILRCLKVMGSS--CPSC 331
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 36.2 bits (82), Expect = 0.064 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSP 309 C+IC + +P+ T CGH FC+ CL +L P Sbjct: 50 CHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCP 85
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 36.2 bits (82), Expect = 0.064 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 12/66 (18%) Frame = +1 Query: 199 ECNICF-ELPQEPIVTL---CGHLFCWPCLYKWLHIHSHSPECPVCKAVV--------EE 342 EC IC EL V L C HLF C+ WL+ H+ CPVC++ + +E Sbjct: 122 ECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHA---TCPVCRSNLTAKSNKPGDE 178 Query: 343 DKLVPL 360 D VPL Sbjct: 179 DDGVPL 184
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 36.2 bits (82), Expect = 0.064 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 +C IC +PIVT C H FC C K S +CP+C+ E Sbjct: 240 DCFICGNPFVDPIVTKCKHYFCTGCALK---SFQKSSKCPICQQNTE 283
>NHLC1_HUMAN (Q6VVB1) NHL repeat-containing protein 1 (Malin)| Length = 395 Score = 36.2 bits (82), Expect = 0.064 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Frame = +1 Query: 199 ECNICFEL-----PQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC +CFE + P CGH+ C C+ H + + ECP C+ Sbjct: 25 ECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPFCR 72
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 35.8 bits (81), Expect = 0.084 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWL------HIHSHSPECPVCKAVVEEDKLVP 357 C+IC L P+ CGH +C C+ + + + CP C+A D L P Sbjct: 16 CSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSLRP 73
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 35.8 bits (81), Expect = 0.084 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +1 Query: 202 CNICFELPQ-EPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C ICFE I+ C H +C C+ K+L S+ +CP C V E L Sbjct: 25 CGICFEYFNIAMIIPQCSHNYCSLCIRKFL---SYKTQCPTCCVTVTEPDL 72
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 35.8 bits (81), Expect = 0.084 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHI-HSHSPEC 315 C IC + +P+ T C HLFC C+ + L + S+ P C Sbjct: 290 CQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSC 328
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 35.8 bits (81), Expect = 0.084 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 9/61 (14%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLY---------KWLHIHSHSPECPVCKAVVEEDKLV 354 C+IC + +P++T CGH FC C+ K S CP C+ + + L Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKGKKGKKKQKGSFPCPECREMSPQRNLR 75 Query: 355 P 357 P Sbjct: 76 P 76
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 35.8 bits (81), Expect = 0.084 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 9/61 (14%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLY---------KWLHIHSHSPECPVCKAVVEEDKLV 354 C+IC + +P++T CGH FC C+ K S CP C+ + + L Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKVKKGKKKQKGSFPCPECREMSPQRNLR 75 Query: 355 P 357 P Sbjct: 76 P 76
>NHLC1_RAT (Q6IMG5) NHL repeat-containing protein 1 (Malin)| Length = 396 Score = 35.8 bits (81), Expect = 0.084 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Frame = +1 Query: 199 ECNICFEL-----PQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC +CFE + P CGH+ C C+ H + + ECP C+ Sbjct: 22 ECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAHPRTLALECPFCR 69
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 35.8 bits (81), Expect = 0.084 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC + + ++ C H FC C+ KW H + CP+C+ Sbjct: 154 ECCICMD-GRADLILPCAHSFCQKCIDKWSDRHRN---CPICR 192
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 35.8 bits (81), Expect = 0.084 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC + + ++ C H FC C+ KW H + CP+C+ Sbjct: 154 ECCICMD-GRADLILPCAHSFCQKCIDKWSDRHRN---CPICR 192
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 35.8 bits (81), Expect = 0.084 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC + + ++ C H FC C+ KW H + CP+C+ Sbjct: 154 ECCICMD-GRADLILPCAHSFCQKCIDKWSDRHRN---CPICR 192
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 35.8 bits (81), Expect = 0.084 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC + + ++ C H FC C+ KW H + CP+C+ Sbjct: 154 ECCICMD-GRADLILPCAHSFCQKCIDKWSDRHRN---CPICR 192
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 35.8 bits (81), Expect = 0.084 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 EC IC + + ++ C H FC C+ KW H CPVC+ V Sbjct: 154 ECCICMD-GRVDLILPCAHSFCQKCIDKWSDRHR---SCPVCRRQV 195
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 35.8 bits (81), Expect = 0.084 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +1 Query: 202 CNICFELPQ-EPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 C ICFE I+ C H +C C+ K+L S+ +CP C V E L Sbjct: 25 CGICFEYFNIAVIIPQCSHNYCSLCIRKFL---SYKTQCPTCCVAVTEPDL 72
>ATL3F_ARATH (Q8L9T5) RING-H2 finger protein ATL3F (RING-H2 finger protein ATL2)| Length = 304 Score = 35.8 bits (81), Expect = 0.084 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 EC +C +E ++ C H F C+ W H HS CP+C+++VE Sbjct: 118 ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHS---TCPLCRSLVE 165
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 35.8 bits (81), Expect = 0.084 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +1 Query: 199 ECNICFELP---QEPIVTLCGHLFCWPCL---YKWLHIHSHSPECPVCKAVVEEDKLVPL 360 EC+IC + P E +T CGH +C C+ + + + P CP C+ + + K+ L Sbjct: 915 ECSICTQSPIPLGEMALTPCGHAYCLNCVLEHFDFQEKNLQKPLCPNCREPISKYKIFKL 974 Query: 361 YGR 369 R Sbjct: 975 RHR 977
>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)| Length = 655 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Frame = +1 Query: 199 ECNICFELPQE----PIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 EC IC E E P + CGH C CL K L + CP C + L L Sbjct: 20 ECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQL 77
>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)| Length = 574 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHL-FCWPC---LYKWLHIHSHSPECPVCKAVVEE 342 EC IC+E + ++ CGH+ C+ C L K LH CP+C+ +++ Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHAC-----CPICRRPIKD 566
>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING| finger protein 67) Length = 574 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHL-FCWPC---LYKWLHIHSHSPECPVCKAVVEE 342 EC IC+E + ++ CGH+ C+ C L K LH CP+C+ +++ Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHAC-----CPICRRPIKD 566
>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) Length = 782 Score = 35.4 bits (80), Expect = 0.11 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 14/74 (18%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEE----------- 342 F+C C EL P+ T+C H C CL + S CP C+ ++ Sbjct: 711 FQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFS--CPACRFELDHSSPTRVNQPLQ 768 Query: 343 ---DKLVPLYGRGK 375 ++L P YG G+ Sbjct: 769 TILNQLFPGYGSGR 782
>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger| protein HT2A) (72 kDa Tat-interacting protein) Length = 653 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Frame = +1 Query: 199 ECNICFELPQE----PIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 EC IC E E P + CGH C CL K L + CP C + L L Sbjct: 19 ECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQL 76
>NHLC1_MOUSE (Q8BR37) NHL repeat-containing protein 1 (Malin)| Length = 401 Score = 35.4 bits (80), Expect = 0.11 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Frame = +1 Query: 199 ECNICFEL-----PQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC +CFE + P CGH+ C C+ H + ECP C+ Sbjct: 27 ECKVCFERFGHWQQRRPRNLPCGHVVCLACVAALAHPRTLGLECPFCR 74
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCL--YKWLHIHSHSPECPVCKAVVEEDKL 351 EC IC + P+ C H+FC+ C+ WL C +C+ + ED L Sbjct: 37 ECAICLQTCVHPVSLPCKHVFCYLCVKGASWL-----GKRCALCRQEIPEDFL 84
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCL--YKWLHIHSHSPECPVCKAVVEEDKL 351 EC IC + P+ C H+FC+ C+ WL C +C+ + ED L Sbjct: 36 ECAICLQTCVHPVSLPCKHVFCYLCVKGASWL-----GKRCALCRQEIPEDFL 83
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCL--YKWLHIHSHSPECPVCKAVVEEDKL 351 EC IC + P+ C H+FC+ C+ WL C +C+ + ED L Sbjct: 35 ECAICLQTCVHPVSLPCKHVFCYLCVKGASWL-----GKRCALCRQEIPEDFL 82
>RN139_MOUSE (Q7TMV1) RING finger protein 139| Length = 668 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +1 Query: 202 CNICF-ELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVC--KAVVEED 345 C IC+ E +T C H F CL KWL+I CP+C K +E++ Sbjct: 547 CAICYHEFTTSARITPCNHYFHALCLRKWLYIQD---TCPMCHQKVYIEDE 594
>ASR1_YEAST (Q06834) Alcohol-sensitive RING finger protein 1| Length = 288 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 EC IC QE + +CGH F C+ +W H +S + +CP+C+ Sbjct: 3 ECPICLADDQEGEQFGCLNVCGHKFHLNCIREW-HKYSINLKCPICR 48
>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting| protein) Length = 510 Score = 35.0 bits (79), Expect = 0.14 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYK 282 C+IC E +EP+ CGH FC C+ + Sbjct: 29 CSICLEFFREPVSVECGHSFCRACIMR 55
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 35.0 bits (79), Expect = 0.14 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 F C I EL ++P++ G + C+ KW+ H+ CP + + L P Y Sbjct: 277 FRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHT--CPTTQQKMSTSALTPNY 330
>RNF41_XENLA (Q5FWL3) RING finger protein 41| Length = 317 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +1 Query: 202 CNICFELPQEPI-VTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 C IC + +EP+ C H FC C+ +W S CPV ++VV L P+ Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWF---SQQQTCPVDRSVVTVAHLRPV 68
>RNF41_MOUSE (Q8BH75) RING finger protein 41| Length = 317 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +1 Query: 202 CNICFELPQEPI-VTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 C IC + +EP+ C H FC C+ +W S CPV ++VV L P+ Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWF---SQQQTCPVDRSVVTVAHLRPV 68
>RNF41_HUMAN (Q9H4P4) RING finger protein 41| Length = 317 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +1 Query: 202 CNICFELPQEPI-VTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPL 360 C IC + +EP+ C H FC C+ +W S CPV ++VV L P+ Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWF---SQQQTCPVDRSVVTVAHLRPV 68
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCL--YKWLHIHSHSPECPVCKAVVEEDKL 351 EC IC + P+ C H+FC+ C+ WL C +C+ + ED L Sbjct: 35 ECAICLQTCVHPVSLPCKHVFCYLCVKGASWL-----GKRCALCRQEIPEDFL 82
>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)| (AMF receptor) (gp78) Length = 643 Score = 35.0 bits (79), Expect = 0.14 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKL 351 +C IC++ Q CGHLF CL WL + P C + + + +++ Sbjct: 340 DCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRV 390
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 35.0 bits (79), Expect = 0.14 Identities = 13/55 (23%), Positives = 29/55 (52%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 +C++C + ++ +T+CGH+FC C + + + CP C + L+ ++ Sbjct: 638 KCSVCSKNWKDTAITVCGHVFCLGCTQE--RLAARLRRCPTCNKGFSANDLLSIH 690
>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Liver regeneration-related protein LRRG126) Length = 774 Score = 35.0 bits (79), Expect = 0.14 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 14/74 (18%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEE----------- 342 F+C C EL P+ T+C H C CL + S CP C+ ++ Sbjct: 703 FQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFS--CPACRYDLDHSSPTRVNQPLQ 760 Query: 343 ---DKLVPLYGRGK 375 ++L P YG G+ Sbjct: 761 TILNQLFPGYGSGR 774
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTL-CGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 C IC + L C H FC C+ +WL P CP+CKA V+ Sbjct: 13 CCICLDAITGAARALPCLHAFCLACIRRWL---EGRPTCPLCKAPVQ 56
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTL-CGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 C IC + L C H FC C+ +WL P CP+CKA V+ Sbjct: 13 CCICLDAITGAARALPCLHAFCLACIRRWL---EGRPTCPLCKAPVQ 56
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +1 Query: 196 FECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 F+C C EL PI T+C H C CL + S CP C+ Sbjct: 722 FQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFS--CPACR 763
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 35.0 bits (79), Expect = 0.14 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCL---YKWLHIHSHSPECPVCKAVVEEDKLVPLYGRG 372 C +C L +P+ CGH FC C+ ++ + CPVC+ + L P R Sbjct: 15 CPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFICPVCRISYQFSNLRP--NRN 72 Query: 373 KDRVDPRSKGVPPGAE 420 + R K P E Sbjct: 73 VANIVERLKMFKPSPE 88
>TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) (RING finger protein 76) Length = 513 Score = 34.7 bits (78), Expect = 0.19 Identities = 14/52 (26%), Positives = 23/52 (44%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 C +C + EP++ CGH C CL + + CP C+ + + P Sbjct: 16 CPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRP 67
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 34.7 bits (78), Expect = 0.19 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHI-HSHSPEC 315 C IC + +P+ T C H+FC C+ + L + S+ P C Sbjct: 293 CQICEHILADPVETNCKHVFCRVCILRCLKVMGSYCPSC 331
>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF| receptor) Length = 643 Score = 34.7 bits (78), Expect = 0.19 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 +C IC++ Q CGHLF CL WL CP C+ Sbjct: 340 DCAICWDSMQAARKLPCGHLFHNSCLRSWL---EQDTSCPTCR 379
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 34.7 bits (78), Expect = 0.19 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSP 309 C+IC + +P+ T CGH FC CL +L P Sbjct: 51 CHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDFCP 86
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 34.7 bits (78), Expect = 0.19 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHI-HSHSPEC 315 C IC + +P+ T C H+FC C+ + L + S+ P C Sbjct: 292 CQICEHILADPVETSCKHVFCRICILRCLKVMGSYCPSC 330
>ATL3L_ARATH (Q9LZJ6) RING-H2 finger protein ATL3L (RING-H2 finger protein ATL5)| Length = 257 Score = 34.3 bits (77), Expect = 0.24 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVE 339 EC++C +E ++ CGH+F C+ W S CP+C+A V+ Sbjct: 112 ECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRS---SCPLCRAPVQ 159
>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent| helicase RAD16) Length = 790 Score = 34.3 bits (77), Expect = 0.24 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHI---HSHSPECPVC 324 C +C + +EPI + C H FC C+ +++ +++ CPVC Sbjct: 537 CQLCNDEAEEPIESKCHHKFCRLCIKEYVESFMENNNKLTCPVC 580
>TRI27_MOUSE (Q62158) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) Length = 513 Score = 34.3 bits (77), Expect = 0.24 Identities = 14/52 (26%), Positives = 23/52 (44%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 C +C + EP++ CGH C CL + + CP C+ + + P Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRP 67
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 34.3 bits (77), Expect = 0.24 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHS-HSPEC 315 C IC + +P+ T C HLFC C+ + + + P C Sbjct: 289 CQICEHILADPVETTCRHLFCRTCILSCIRVMGCYCPSC 327
>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 820 Score = 34.3 bits (77), Expect = 0.24 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 +C+ C + ++ ++ C H FC CL + I S +CP C ++ + LY Sbjct: 766 KCSCCEQNFKQQVIVKCMHTFCKQCLEQ--RIASRQRKCPACGLAFAKEDIQTLY 818
>ATL5O_ARATH (Q9LUZ9) Putative RING-H2 finger protein ATL5O| Length = 308 Score = 34.3 bits (77), Expect = 0.24 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1 Query: 247 CGHLFCWPCLYKWLHIHSHSPEC--PVCKAVVEEDKLVPLYGRGKDRVDPRSKGVPPG 414 CGH F C+ WL HS P C PV AV +E+ L ++ + R + P G Sbjct: 157 CGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKLAVNAVEEEAEVRLQMSPAG 214
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 34.3 bits (77), Expect = 0.24 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +1 Query: 202 CNICFE-LPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C IC + + + ++ C H FC PC+ K + S+ P CP C+ Sbjct: 561 CVICMDTISNKKVLPKCKHEFCAPCINKAM---SYKPICPTCQ 600
>ATL5P_ARATH (Q9FKX5) RING-H2 finger protein ATL5P| Length = 221 Score = 34.3 bits (77), Expect = 0.24 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Frame = +1 Query: 202 CNICFELPQ--EPIVTL--CGHLFCWPCLYKWLHIHSHSPECPVCK 327 C++C + Q E + +L C H+F PC+ KWL H+ CP+C+ Sbjct: 176 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHA---SCPLCR 218
>RNF24_HUMAN (Q9Y225) RING finger protein 24| Length = 148 Score = 34.3 bits (77), Expect = 0.24 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +1 Query: 202 CNICFE--LPQEPI-VTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRG 372 C +C E P++ + + C H F CL KWL + CP+C V + L L+ + Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRK---VCPLCNMPVLQ--LAQLHSK- 131 Query: 373 KDRVDPRSKGVPPGAE 420 +DR P +G PGAE Sbjct: 132 QDRGPP--QGPLPGAE 145
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 34.3 bits (77), Expect = 0.24 Identities = 13/55 (23%), Positives = 29/55 (52%) Frame = +1 Query: 199 ECNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 +C++C + ++ +T+CGH+FC C + + + CP C + L+ ++ Sbjct: 628 KCSVCSKNWKDTAITVCGHVFCSKCTQE--RLAARLRRCPSCNRGFSANDLLSIH 680
>ATL1N_ARATH (Q84W40) RING-H2 finger protein ATL1N precursor| Length = 404 Score = 34.3 bits (77), Expect = 0.24 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYG 366 EC++C ++ ++ C H+F C+ WL H+ CP+C+A L+P+ G Sbjct: 143 ECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT---TCPLCRA-----DLIPVPG 194 Query: 367 RGKDRVD-PRSKGVPPGAEIPHRPTGQR 447 + P PPG++ P G R Sbjct: 195 ESIVSIQIPGLVNDPPGSD----PNGDR 218
>APC11_PONPY (Q5R8A2) Anaphase-promoting complex subunit 11 (APC11) (Cyclosome| subunit 11) Length = 84 Score = 34.3 bits (77), Expect = 0.24 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 247 CGHLFCWPCLYKWLHIHSHSPECPVCK 327 C H F C+ KWLH CP+C+ Sbjct: 51 CSHCFHMHCILKWLHAQQVQQHCPMCR 77
>APC11_HUMAN (Q9NYG5) Anaphase-promoting complex subunit 11 (APC11) (Cyclosome| subunit 11) (Hepatocellular carcinoma-associated RING finger protein) Length = 84 Score = 34.3 bits (77), Expect = 0.24 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 247 CGHLFCWPCLYKWLHIHSHSPECPVCK 327 C H F C+ KWLH CP+C+ Sbjct: 51 CSHCFHMHCILKWLHAQQVQQHCPMCR 77
>ZFP_IRV6 (P47732) Zinc finger protein| Length = 208 Score = 33.9 bits (76), Expect = 0.32 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCK 327 C ICF ++ CGH C+ C++K CP+CK Sbjct: 163 CKICFTNKITKVLIPCGHSSCYECVFK-------LQTCPICK 197
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 33.9 bits (76), Expect = 0.32 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +1 Query: 199 ECNICFELPQEPIVTL-CGHLFCWPCLYKWLHIHSHSPECPVCKAVV 336 +C IC ++ TL C H FC C+ +W S CP+C A V Sbjct: 45 DCPICLDVAATEAQTLPCMHKFCLDCIQRWT---LTSTACPLCNARV 88
>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)| Length = 861 Score = 33.9 bits (76), Expect = 0.32 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHI--HSHSPECPVCKAVVEEDKLVP 357 C IC E+ Q+ I + C H FC C+ ++++ + CP C + D P Sbjct: 609 CKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIPLSIDLSAP 662
>RAD5_ASPFU (Q4WVM1) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1245 Score = 33.9 bits (76), Expect = 0.32 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = +1 Query: 199 ECNICFELPQ-EPIVTLCGHLFCWPCLYKWLHIHSHS---PECPVCKAVV 336 EC IC E P +P VT C H C CL ++ + P C C+A V Sbjct: 940 ECPICSEEPMIDPAVTACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAPV 989
>ATL4G_ARATH (Q8LF65) RING-H2 finger protein ATL4G (RING-H2 finger protein| ATL17) Length = 235 Score = 33.9 bits (76), Expect = 0.32 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYG 366 EC++C ++ ++ C H F C+ W H HS CP+C++ +E P G Sbjct: 75 ECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHS---SCPLCRSQIE-----PFAG 126 Query: 367 RGKDRVD 387 K +D Sbjct: 127 GVKSSMD 133
>BRAP_MOUSE (Q99MP8) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) Length = 591 Score = 33.9 bits (76), Expect = 0.32 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Frame = +1 Query: 199 ECNICFELPQEPI----VTLCGHLFCWPCLYKWLHIHSHSPECPVCK-----AVVEEDK 348 +C +C E E + TLC H F CL +W CPVC+ VEE+K Sbjct: 262 KCTVCLERMDESVNGILTTLCNHSFHSQCLQRW-----DDTTCPVCRYCQTPEPVEENK 315
>TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger protein 18)| (Testis-specific ring-finger protein) Length = 452 Score = 33.9 bits (76), Expect = 0.32 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLY-KWLHIHSHSPECPVCKAVVEEDKL 351 C +C +P+ CGH FC PC Y W I +C C E+ L Sbjct: 15 CPLCMNYFIDPVTIDCGHSFCRPCFYLNWQDI-PFLVQCSECTKSTEQINL 64
>ATL4L_ARATH (Q9ZT49) RING-H2 finger protein ATL4L (RING-H2 zinc finger protein| RHA3b) Length = 200 Score = 33.9 bits (76), Expect = 0.32 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Frame = +1 Query: 199 ECNICF----ELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYG 366 EC IC E + I+ LC H F C+ KWL S P C V+ D+ G Sbjct: 112 ECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRC----G 167 Query: 367 RGKDRVDPRSKGVPPGAEIPHRPT 438 + + K PP + P + T Sbjct: 168 HHASTAETQVKDQPPHHQHPSQFT 191
>TRI48_HUMAN (Q8IWZ4) Tripartite motif protein 48 (RING finger protein 101)| Length = 375 Score = 33.9 bits (76), Expect = 0.32 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLY-KWLHIHSHSPECPVCKAVVEEDKL 351 C IC +P+ CGH FC PC Y W I + +C C +++ L Sbjct: 15 CPICMNYFIDPVTIDCGHSFCRPCFYLNWQDIPILT-QCFECIKTIQQRNL 64
>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein| ATL16) Length = 375 Score = 33.9 bits (76), Expect = 0.32 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = +1 Query: 199 ECNICFELPQEP----IVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 EC++C Q+ I+ C HLF C+ WL ++ CP+C+ V D P Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWL---QNNANCPLCRTRVSCDTSFP 190
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 33.9 bits (76), Expect = 0.32 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Frame = +1 Query: 199 ECNICFELPQEP---IVTLCGHLFCWPCLYKWLHIH---SHSPECPVCKAVVEEDKLVPL 360 EC+IC P E +VT C H+FC CL ++ + S +CP C+ + ++ + Sbjct: 896 ECSICTAEPIESSSAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLNRCL-A 954 Query: 361 YGRGKDRV 384 + +G D + Sbjct: 955 FEKGSDGI 962
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 33.9 bits (76), Expect = 0.32 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLY 363 C IC + + CGHLFC C+ I + +CP C ++ ++P++ Sbjct: 651 CTICRNNFKNTALKTCGHLFCNQCVDD--RISNRMRKCPTCSRAFDKMDVMPVH 702
>BRAP_HUMAN (Q7Z569) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) (RING finger protein 52) (NY-REN-63 antigen) Length = 592 Score = 33.9 bits (76), Expect = 0.32 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Frame = +1 Query: 199 ECNICFELPQEPI----VTLCGHLFCWPCLYKWLHIHSHSPECPVCK-----AVVEEDK 348 +C +C E E + TLC H F CL +W CPVC+ VEE+K Sbjct: 263 KCTVCLERMDESVNGILTTLCNHSFHSQCLQRW-----DDTTCPVCRYCQTPEPVEENK 316
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 33.5 bits (75), Expect = 0.42 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +1 Query: 202 CNICFE-LPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKD 378 C+IC L +T C H FC C+ + + +S CP C VV + + PLY D Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFY---YSNRCPKCNIVVHQTQ--PLYNIRLD 189 Query: 379 R 381 R Sbjct: 190 R 190
>ATL1G_ARATH (Q570X5) RING-H2 finger protein ATL1G| Length = 261 Score = 33.5 bits (75), Expect = 0.42 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 7/89 (7%) Frame = +1 Query: 199 ECNICF-------ELPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVP 357 +C++C +L Q P+ C H F C+ WL H+ CP+C+ L+P Sbjct: 99 QCSVCLGDYQPNDKLQQIPV---CKHTFHMDCIDLWLTSHT---TCPLCRLA-----LIP 147 Query: 358 LYGRGKDRVDPRSKGVPPGAEIPHRPTGQ 444 R + + DP V P E+ +P + Sbjct: 148 SRSR-QSQDDPVPSLVSPDEEVSSQPESE 175
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 33.5 bits (75), Expect = 0.42 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 202 CNICFELPQEPIVTLCGHLFCWPCLYK-WLHIHSHSPEC 315 C+IC + EP+ CGH FC C+++ + S PEC Sbjct: 20 CSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPEC 58
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 33.5 bits (75), Expect = 0.42 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +1 Query: 202 CNICFE-LPQEPIVTLCGHLFCWPCLYKWLHIHSHSPECPVCKAVVEEDKLVPLYGRGKD 378 C+IC L +T C H FC C+ + + +S CP C VV + + PLY D Sbjct: 137 CSICKGYLIDATTITECLHTFCKSCIVRHFY---YSNRCPKCNIVVHQTQ--PLYNIRLD 191 Query: 379 R 381 R Sbjct: 192 R 192 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,693,681 Number of Sequences: 219361 Number of extensions: 791268 Number of successful extensions: 3319 Number of sequences better than 10.0: 409 Number of HSP's better than 10.0 without gapping: 3089 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3277 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
