ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart11b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 248 2e-62
2dbj|AK099519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
3dbj|AK062128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 248 2e-62
5emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 248 2e-62
6ref|NM_191378.1| Oryza sativa (japonica cultivar-group), predic... 214 2e-52
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
8dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
9dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
10dbj|AK070278.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
11dbj|AK069471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
12gb|BT018923.1| Zea mays clone Contig34.F mRNA sequence 204 2e-49
13gb|AY110835.1| Zea mays CL46086_1 mRNA sequence 117 4e-23
14ref|XM_469289.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 2e-21
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
17gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 geno... 111 2e-21
18dbj|AK068558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
19gb|BT017562.1| Zea mays clone EL01N0425G08.c mRNA sequence 98 4e-17
20gb|AY110946.1| Zea mays CL21045_1 mRNA sequence 96 1e-16
21ref|XM_466971.1| Oryza sativa (japonica cultivar-group), mRNA 68 3e-08
22ref|XM_506883.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 3e-08
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
24dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
25dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
26dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
27dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
28gb|AY129244.1| Populus x canescens putative RING protein (RING) ... 62 2e-06
29gb|DQ443177.1| Bombyx mori ring finger protein 5 mRNA, complete cds 52 0.002
30gb|AY347825.1| Malus x domestica clone 13-4 unknown mRNA 52 0.002
31ref|NM_118882.2| Arabidopsis thaliana protein binding / ubiquiti... 48 0.031
32emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 48 0.031
33emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, B... 48 0.031
34gb|BT006285.1| Arabidopsis thaliana At4g27470 mRNA, complete cds 48 0.031
35gb|DQ059124.1| Arabidopsis thaliana RING finger family protein (... 48 0.031
36gb|BT002429.1| Arabidopsis thaliana putative RING zinc finger pr... 48 0.031
37ref|XM_369667.1| Magnaporthe grisea 70-15 chromosome III hypothe... 46 0.12
38ref|NM_213037.1| Danio rerio zgc:73070 (zgc:73070), mRNA 46 0.12
39gb|BC059445.1| Danio rerio zgc:73070, mRNA (cDNA clone MGC:73070... 46 0.12
40ref|NM_189106.2| Oryza sativa (japonica cultivar-group), mRNA 44 0.48
41ref|XM_507140.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.48
42ref|NM_192062.1| Oryza sativa (japonica cultivar-group), predic... 44 0.48
43gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.48
44gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.48
45dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
46dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
47dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
48dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
49dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
50dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
51dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
52dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
53dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
54ref|XM_478618.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.9
55ref|XM_478541.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.9
56ref|XM_430124.1| PREDICTED: Gallus gallus LOC424079 (LOC424079),... 42 1.9
57emb|BX927413.10| Zebrafish DNA sequence from clone DKEY-29D8 in ... 42 1.9
58emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chro... 42 1.9
59gb|AY267681.1| Bigelowiella natans phosphoglycerate kinase 1 mRN... 42 1.9
60gb|AF521878.1| Streptomyces narbonensis desosamine biosynthetic ... 42 1.9
61gb|AE005773.1| Caulobacter crescentus CB15 section 99 of 359 of ... 42 1.9
62gb|AE011681.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.9
63gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.9
64gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, compl... 42 1.9
65dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
66dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
67dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
68dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
69dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
70dbj|AK060565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
71dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.9
72dbj|AP004524.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 1.9
73ref|NM_188389.1| Oryza sativa (japonica cultivar-group), Ozsa811... 40 7.5
74gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 7.5
75ref|NM_204414.1| Gallus gallus Y box binding protein 1 (YBX1), mRNA 40 7.5
76gb|AY441041.1| Armigeres subalbatus ASAP ID: 41793 conserved unk... 40 7.5
77gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.5
78ref|XM_876058.1| PREDICTED: Bos taurus similar to Peroxisome ass... 40 7.5
79ref|XM_865404.1| PREDICTED: Bos taurus similar to Peroxisome ass... 40 7.5
80ref|XM_975664.1| PREDICTED: Mus musculus extraembryonic, spermat... 40 7.5
81ref|XM_975726.1| PREDICTED: Mus musculus extraembryonic, spermat... 40 7.5
82ref|XM_975696.1| PREDICTED: Mus musculus extraembryonic, spermat... 40 7.5
83ref|XM_755315.1| Ustilago maydis 521 hypothetical protein (UM042... 40 7.5
84ref|XM_571045.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.5
85gb|AC122867.4| Mus musculus BAC clone RP23-146P6 from 8, complet... 40 7.5
86gb|AC124198.2| Mus musculus BAC clone RP23-306E4 from 8, complet... 40 7.5
87emb|AM040274.1| Capsicum chinense mRNA for putative zinc finger ... 40 7.5
88emb|AL049575.7|HSDJ316D7 Human DNA sequence from clone RP1-316D7... 40 7.5
89emb|CR382384.18| Zebrafish DNA sequence from clone CH211-15B7 in... 40 7.5
90gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.5
91ref|NM_007957.1| Mus musculus extraembryonic, spermatogenesis, h... 40 7.5
92gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.5
93gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.5
94ref|XM_683844.1| PREDICTED: Danio rerio similar to Rnf10 protein... 40 7.5
95emb|AL672275.14| Mouse DNA sequence from clone RP23-89D4 on chro... 40 7.5
96emb|CR391085.1| Gallus gallus finished cDNA, clone ChEST68a10 40 7.5
97gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.5
98gb|AY009149.1| Ustilago maydis chitinase (CTS1) gene, complete cds 40 7.5
99gb|AC122714.2| Homo sapiens chromosome 5 clone RP11-451H23, comp... 40 7.5
100dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
101dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
102dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.5
103dbj|AB083323.1| Macaca fascicularis pex10 mRNA for Peroxisome as... 40 7.5
104gb|AF017735.1|AF017735 Mus musculus paired-like homeobox (Epx) m... 40 7.5
105gb|AF017734.1|AF017734 Mus musculus paired-like homeobox (Epx) m... 40 7.5
106gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.5
107gb|AF085715.1|AF085715 Mus musculus homeobox protein SPX1 mRNA, ... 40 7.5
108gb|AF004211.1|AF004211 Mus musculus paired-like homeodomain cont... 40 7.5
109dbj|D26328.1|CHKESTPC13 Gallus gallus mRNA for mouse dbpB/YB-1 p... 40 7.5
110gb|L13032.1|CHKCSYB1 Gallus gallus YB-1 protein mRNA, complete cds 40 7.5

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  248 bits (125), Expect = 2e-62
 Identities = 188/209 (89%)
 Strand = Plus / Plus

                                                                            
Query: 187      gggggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactc 246
                ||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 27301035 gggggaagcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctc 27301094

                                                                            
Query: 247      tgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcc 306
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 27301095 tgtggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattca 27301154

                                                                            
Query: 307      cccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggc 366
                || |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| |||
Sbjct: 27301155 cctgagtgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggc 27301214

                                             
Query: 367      cgtggcaaggaccgcgtcgaccccaggtc 395
                ||||| |||||||| || ||||| |||||
Sbjct: 27301215 cgtggtaaggaccgtgttgacccaaggtc 27301243



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                            
Query: 446      ggcccgccaccgccccgcaggcagaccccaacaaccacttccccaacgccaaccctaacc 505
                |||| ||||| || ||||||||  | || |||| |||||||||||| |||||||| ||||
Sbjct: 27301291 ggcctgccacggctccgcaggccaatcctaacacccacttccccaatgccaaccccaacc 27301350

                                    
Query: 506      cctggttcatggggggaggc 525
                | ||||||||||| ||||||
Sbjct: 27301351 cttggttcatgggtggaggc 27301370



to top

>dbj|AK099519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030E05, full
           insert sequence
          Length = 1092

 Score =  248 bits (125), Expect = 2e-62
 Identities = 188/209 (89%)
 Strand = Plus / Plus

                                                                       
Query: 187 gggggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactc 246
           ||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 146 gggggaagcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctc 205

                                                                       
Query: 247 tgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcc 306
           || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 206 tgtggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattca 265

                                                                       
Query: 307 cccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggc 366
           || |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| |||
Sbjct: 266 cctgagtgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggc 325

                                        
Query: 367 cgtggcaaggaccgcgtcgaccccaggtc 395
           ||||| |||||||| || ||||| |||||
Sbjct: 326 cgtggtaaggaccgtgttgacccaaggtc 354



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 446 ggcccgccaccgccccgcaggcagaccccaacaaccacttccccaacgccaaccctaacc 505
           |||| ||||| || ||||||||  | || |||| |||||||||||| |||||||| ||||
Sbjct: 402 ggcctgccacggctccgcaggccaatcctaacacccacttccccaatgccaaccccaacc 461

                               
Query: 506 cctggttcatggggggaggc 525
           | ||||||||||| ||||||
Sbjct: 462 cttggttcatgggtggaggc 481



to top

>dbj|AK062128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D12, full
           insert sequence
          Length = 1156

 Score =  248 bits (125), Expect = 2e-62
 Identities = 188/209 (89%)
 Strand = Plus / Plus

                                                                       
Query: 187 gggggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactc 246
           ||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 143 gggggaagcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctc 202

                                                                       
Query: 247 tgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcc 306
           || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 203 tgtggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattca 262

                                                                       
Query: 307 cccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggc 366
           || |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| |||
Sbjct: 263 cctgagtgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggc 322

                                        
Query: 367 cgtggcaaggaccgcgtcgaccccaggtc 395
           ||||| |||||||| || ||||| |||||
Sbjct: 323 cgtggtaaggaccgtgttgacccaaggtc 351



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 446 ggcccgccaccgccccgcaggcagaccccaacaaccacttccccaacgccaaccctaacc 505
           |||| ||||| || ||||||||  | || |||| |||||||||||| |||||||| ||||
Sbjct: 399 ggcctgccacggctccgcaggccaatcctaacacccacttccccaatgccaaccccaacc 458

                               
Query: 506 cctggttcatggggggaggc 525
           | ||||||||||| ||||||
Sbjct: 459 cttggttcatgggtggaggc 478



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  248 bits (125), Expect = 2e-62
 Identities = 188/209 (89%)
 Strand = Plus / Plus

                                                                            
Query: 187      gggggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactc 246
                ||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 27226635 gggggaagcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctc 27226694

                                                                            
Query: 247      tgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcc 306
                || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 27226695 tgtggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattca 27226754

                                                                            
Query: 307      cccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggc 366
                || |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| |||
Sbjct: 27226755 cctgagtgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggc 27226814

                                             
Query: 367      cgtggcaaggaccgcgtcgaccccaggtc 395
                ||||| |||||||| || ||||| |||||
Sbjct: 27226815 cgtggtaaggaccgtgttgacccaaggtc 27226843



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                            
Query: 446      ggcccgccaccgccccgcaggcagaccccaacaaccacttccccaacgccaaccctaacc 505
                |||| ||||| || ||||||||  | || |||| |||||||||||| |||||||| ||||
Sbjct: 27226891 ggcctgccacggctccgcaggccaatcctaacacccacttccccaatgccaaccccaacc 27226950

                                    
Query: 506      cctggttcatggggggaggc 525
                | ||||||||||| ||||||
Sbjct: 27226951 cttggttcatgggtggaggc 27226970



to top

>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146585

 Score =  248 bits (125), Expect = 2e-62
 Identities = 188/209 (89%)
 Strand = Plus / Plus

                                                                          
Query: 187    gggggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactc 246
              ||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 114067 gggggaagcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctc 114126

                                                                          
Query: 247    tgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcc 306
              || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 114127 tgtggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattca 114186

                                                                          
Query: 307    cccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggc 366
              || |||||||| ||||||||||| || ||||||||||| ||||| ||||| ||||| |||
Sbjct: 114187 cctgagtgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggc 114246

                                           
Query: 367    cgtggcaaggaccgcgtcgaccccaggtc 395
              ||||| |||||||| || ||||| |||||
Sbjct: 114247 cgtggtaaggaccgtgttgacccaaggtc 114275



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                          
Query: 446    ggcccgccaccgccccgcaggcagaccccaacaaccacttccccaacgccaaccctaacc 505
              |||| ||||| || ||||||||  | || |||| |||||||||||| |||||||| ||||
Sbjct: 114323 ggcctgccacggctccgcaggccaatcctaacacccacttccccaatgccaaccccaacc 114382

                                  
Query: 506    cctggttcatggggggaggc 525
              | ||||||||||| ||||||
Sbjct: 114383 cttggttcatgggtggaggc 114402



to top

>ref|NM_191378.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1683

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                        
Query: 189  gggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactctg 248
            ||||||||||||||||||||| ||| | |||||  | ||||| ||| ||||||| |||||
Sbjct: 1074 gggcagcttcgagtgcaacatctgcctggagctagcccaggaccccgtcgtcaccctctg 1133

                                                                        
Query: 249  cggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcccc 308
            ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| ||||||||| 
Sbjct: 1134 cggccacctcttctgctggccgtgcctctacgagtggctccacgtccacgcgcactcccg 1193

                                                                        
Query: 309  cgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
            ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||
Sbjct: 1194 cgagtgccccgtctgcaaggccggcctcgaggaggagaagctcgtccccctctacggccg 1253

                    
Query: 369  tggcaagg 376
             |||||||
Sbjct: 1254 cggcaagg 1261



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Minus

                                                                            
Query: 189      gggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactctg 248
                ||||||||||||||||||||| ||| | |||||  | ||||| ||| ||||||| |||||
Sbjct: 32270798 gggcagcttcgagtgcaacatctgcctggagctagcccaggaccccgtcgtcaccctctg 32270739

                                                                            
Query: 249      cggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcccc 308
                ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| ||||||||| 
Sbjct: 32270738 cggccacctcttctgctggccgtgcctctacgagtggctccacgtccacgcgcactcccg 32270679

                                                                            
Query: 309      cgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
                ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||
Sbjct: 32270678 cgagtgccccgtctgcaaggccggcctcgaggaggagaagctcgtccccctctacggccg 32270619

                        
Query: 369      tggcaagg 376
                 |||||||
Sbjct: 32270618 cggcaagg 32270611



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 55       gcgccgtcccctccctccgcccggccgccgctcg 88
                ||||||||||||||||||| |  |||||||||||
Sbjct: 28126586 gcgccgtcccctccctccggctcgccgccgctcg 28126553



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 156     gagcgcgagcgggagcgtgg 175
               ||||||||||||||||||||
Sbjct: 6006056 gagcgcgagcgggagcgtgg 6006075



to top

>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0403C05
          Length = 151085

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Minus

                                                                          
Query: 189    gggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactctg 248
              ||||||||||||||||||||| ||| | |||||  | ||||| ||| ||||||| |||||
Sbjct: 141551 gggcagcttcgagtgcaacatctgcctggagctagcccaggaccccgtcgtcaccctctg 141492

                                                                          
Query: 249    cggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcccc 308
              ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| ||||||||| 
Sbjct: 141491 cggccacctcttctgctggccgtgcctctacgagtggctccacgtccacgcgcactcccg 141432

                                                                          
Query: 309    cgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
              ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||
Sbjct: 141431 cgagtgccccgtctgcaaggccggcctcgaggaggagaagctcgtccccctctacggccg 141372

                      
Query: 369    tggcaagg 376
               |||||||
Sbjct: 141371 cggcaagg 141364



to top

>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBb0053G03
          Length = 101901

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Minus

                                                                        
Query: 189  gggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactctg 248
            ||||||||||||||||||||| ||| | |||||  | ||||| ||| ||||||| |||||
Sbjct: 3083 gggcagcttcgagtgcaacatctgcctggagctagcccaggaccccgtcgtcaccctctg 3024

                                                                        
Query: 249  cggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcccc 308
            ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| ||||||||| 
Sbjct: 3023 cggccacctcttctgctggccgtgcctctacgagtggctccacgtccacgcgcactcccg 2964

                                                                        
Query: 309  cgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
            ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||
Sbjct: 2963 cgagtgccccgtctgcaaggccggcctcgaggaggagaagctcgtccccctctacggccg 2904

                    
Query: 369  tggcaagg 376
             |||||||
Sbjct: 2903 cggcaagg 2896



to top

>dbj|AK070278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F08, full
           insert sequence
          Length = 1579

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 189 gggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactctg 248
           ||||||||||||||||||||| ||| | |||||  | ||||| ||| ||||||| |||||
Sbjct: 687 gggcagcttcgagtgcaacatctgcctggagctagcccaggaccccgtcgtcaccctctg 746

                                                                       
Query: 249 cggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcccc 308
           ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| ||||||||| 
Sbjct: 747 cggccacctcttctgctggccgtgcctctacgagtggctccacgtccacgcgcactcccg 806

                                                                       
Query: 309 cgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
           ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||
Sbjct: 807 cgagtgccccgtctgcaaggccggcctcgaggaggagaagctcgtccccctctacggccg 866

                   
Query: 369 tggcaagg 376
            |||||||
Sbjct: 867 cggcaagg 874



to top

>dbj|AK069471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M16, full
           insert sequence
          Length = 1382

 Score =  214 bits (108), Expect = 2e-52
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 189 gggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactctg 248
           ||||||||||||||||||||| ||| | |||||  | ||||| ||| ||||||| |||||
Sbjct: 425 gggcagcttcgagtgcaacatctgcctggagctagcccaggaccccgtcgtcaccctctg 484

                                                                       
Query: 249 cggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcccc 308
           ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| ||||||||| 
Sbjct: 485 cggccacctcttctgctggccgtgcctctacgagtggctccacgtccacgcgcactcccg 544

                                                                       
Query: 309 cgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
           ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||
Sbjct: 545 cgagtgccccgtctgcaaggccggcctcgaggaggagaagctcgtccccctctacggccg 604

                   
Query: 369 tggcaagg 376
            |||||||
Sbjct: 605 cggcaagg 612



to top

>gb|BT018923.1| Zea mays clone Contig34.F mRNA sequence
          Length = 1118

 Score =  204 bits (103), Expect = 2e-49
 Identities = 163/183 (89%)
 Strand = Plus / Plus

                                                                       
Query: 189 gggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactctg 248
           ||||||||||||||||||||| ||  | || ||| ||||||| ||| | ||||| |||||
Sbjct: 264 gggcagcttcgagtgcaacatctgtctggacctggcgcaggatcccgtggtcaccctctg 323

                                                                       
Query: 249 cggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcccc 308
           ||||||||||||||||||||||||||||||| ||||||| ||| | ||| ||||||||| 
Sbjct: 324 cggccacctcttctgctggccatgcctctacgagtggctccacgtgcacgcgcactccca 383

                                                                       
Query: 309 cgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
            ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 384 ggagtgccccgtctgcaaggccgtcgtcgaggaggggaagctcgtccctctctacggccg 443

              
Query: 369 tgg 371
           |||
Sbjct: 444 tgg 446



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 431 ggcccaccgggcagcggcccgccaccgccccgcaggcagacc 472
           |||| ||||||||||||||| |||| ||||||||| ||||||
Sbjct: 503 ggccgaccgggcagcggccctccactgccccgcagccagacc 544



to top

>gb|AY110835.1| Zea mays CL46086_1 mRNA sequence
          Length = 842

 Score =  117 bits (59), Expect = 4e-23
 Identities = 123/146 (84%)
 Strand = Plus / Minus

                                                                       
Query: 250 ggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactccccc 309
           |||||||||||||||||||| ||||| |||  |||||||||||| ||| | ||||| || 
Sbjct: 831 ggccacctcttctgctggccgtgcctttaccggtggctgcacattcacgcacactcgcca 772

                                                                       
Query: 310 gagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccgt 369
           |||||||| || ||||||||| |||| |||||||||||||||||     | || || |||
Sbjct: 771 gagtgcccagtgtgcaaggccctcgtggaggaggacaagctcgtnnnnntttatgggcgt 712

                                     
Query: 370 ggcaaggaccgcgtcgaccccaggtc 395
           |||||||| ||||||||||| |||||
Sbjct: 711 ggcaaggatcgcgtcgacccgaggtc 686



to top

>ref|XM_469289.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1215

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 ctctgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcac 303
           ||||| |||||||||||||||||||||||  | |||| |||| ||||||||||| | |||
Sbjct: 248 ctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatccacgcacac 307

                                                                       
Query: 304 tcccccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctac 363
           || || |||||||| || ||||| || ||||| || ||||| |||||||| || || || 
Sbjct: 308 tctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttcccctttat 367

                                           
Query: 364 ggccgtggcaaggaccgcgtcgaccccaggtc 395
           || |||||||||||||||||||| || |||||
Sbjct: 368 gggcgtggcaaggaccgcgtcgatccaaggtc 399



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                            
Query: 244      ctctgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcac 303
                ||||| |||||||||||||||||||||||  | |||| |||| ||||||||||| | |||
Sbjct: 26572668 ctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatccacgcacac 26572727

                                                                            
Query: 304      tcccccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctac 363
                || || |||||||| || ||||| || ||||| || ||||| |||||||| || || || 
Sbjct: 26572728 tctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttcccctttat 26572787

                                                
Query: 364      ggccgtggcaaggaccgcgtcgaccccaggtc 395
                || |||||||||||||||||||| || |||||
Sbjct: 26572788 gggcgtggcaaggaccgcgtcgatccaaggtc 26572819



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 431      ggcccaccgggcagcggccc 450
                ||||||||||||||||||||
Sbjct: 13775798 ggcccaccgggcagcggccc 13775817



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                            
Query: 244      ctctgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcac 303
                ||||| |||||||||||||||||||||||  | |||| |||| ||||||||||| | |||
Sbjct: 26663991 ctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatccacgcacac 26664050

                                                                            
Query: 304      tcccccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctac 363
                || || |||||||| || ||||| || ||||| || ||||| |||||||| || || || 
Sbjct: 26664051 tctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttcccctttat 26664110

                                                
Query: 364      ggccgtggcaaggaccgcgtcgaccccaggtc 395
                || |||||||||||||||||||| || |||||
Sbjct: 26664111 gggcgtggcaaggaccgcgtcgatccaaggtc 26664142



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 431      ggcccaccgggcagcggccc 450
                ||||||||||||||||||||
Sbjct: 13770773 ggcccaccgggcagcggccc 13770792



to top

>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete
             sequence
          Length = 136712

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                         
Query: 244   ctctgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcac 303
             ||||| |||||||||||||||||||||||  | |||| |||| ||||||||||| | |||
Sbjct: 95482 ctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatccacgcacac 95541

                                                                         
Query: 304   tcccccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctac 363
             || || |||||||| || ||||| || ||||| || ||||| |||||||| || || || 
Sbjct: 95542 tctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttcccctttat 95601

                                             
Query: 364   ggccgtggcaaggaccgcgtcgaccccaggtc 395
             || |||||||||||||||||||| || |||||
Sbjct: 95602 gggcgtggcaaggaccgcgtcgatccaaggtc 95633



to top

>dbj|AK068558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153F20, full
            insert sequence
          Length = 1906

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                        
Query: 244  ctctgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcac 303
            ||||| |||||||||||||||||||||||  | |||| |||| ||||||||||| | |||
Sbjct: 994  ctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatccacgcacac 1053

                                                                        
Query: 304  tcccccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctac 363
            || || |||||||| || ||||| || ||||| || ||||| |||||||| || || || 
Sbjct: 1054 tctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttcccctttat 1113

                                            
Query: 364  ggccgtggcaaggaccgcgtcgaccccaggtc 395
            || |||||||||||||||||||| || |||||
Sbjct: 1114 gggcgtggcaaggaccgcgtcgatccaaggtc 1145



to top

>gb|BT017562.1| Zea mays clone EL01N0425G08.c mRNA sequence
          Length = 731

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 169/209 (80%)
 Strand = Plus / Plus

                                                                       
Query: 187 gggggcagcttcgagtgcaacatatgcttcgagctgccgcaggagcccatcgtcacactc 246
           ||||| ||||| || || ||||||||||| |||||||| || ||||| || || || || 
Sbjct: 212 ggggggagctttgaatgtaacatatgctttgagctgcctcaagagccaatagtgactctt 271

                                                                       
Query: 247 tgcggccacctcttctgctggccatgcctctacaagtggctgcacatccactcgcactcc 306
           || |||||||||||||||||||||||||| |||  |||||||||||||||  | || || 
Sbjct: 272 tgtggccacctcttctgctggccatgcctttaccggtggctgcacatccatgcacattcg 331

                                                                       
Query: 307 cccgagtgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggc 366
           || |||||||| || ||||||||  | || ||||| |||||||| || || || || || 
Sbjct: 332 ccagagtgcccagtgtgcaaggctcttgtggaggaagacaagcttgttcccctttatgga 391

                                        
Query: 367 cgtggcaaggaccgcgtcgaccccaggtc 395
           || |||||||| || || ||||| |||||
Sbjct: 392 cgcggcaaggatcgtgttgacccaaggtc 420



to top

>gb|AY110946.1| Zea mays CL21045_1 mRNA sequence
          Length = 798

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 ctgctggccatgcctctacaagtggctgcacatccactcgcactcccccgagtgccccgt 320
           ||||||||| ||||||||| ||||||| ||| ||||| | ||||| |  |||||||||||
Sbjct: 1   ctgctggccctgcctctacgagtggctccacgtccacgcacactctcaggagtgccccgt 60

                                                              
Query: 321 ctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccgtgg 371
           |||||||||||||||||||||||  || |||||     |||||||||||||
Sbjct: 61  ctgcaaggccgtcgtcgaggaggggaaactcgtnnnnntctacggccgtgg 111



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 431 ggcccaccgggcagcggcccgccaccgccccgcaggcagaccccaacaacca 482
           |||| |||||||||||| || |||| ||||||||| | |||| ||| |||||
Sbjct: 168 ggccgaccgggcagcggtcctccactgccccgcagccggaccacaataacca 219



to top

>ref|XM_466971.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1462

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 238 gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcac 291
           ||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 549 gtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcac 602



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 313 tgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
           |||||||| ||||||||||  |||  |  ||||| |||||| ||||||||||||||
Sbjct: 660 tgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccg 715



to top

>ref|XM_506883.1| PREDICTED Oryza sativa (japonica cultivar-group), P0010C01.23-1 mRNA
          Length = 2039

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 238  gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcac 291
            ||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 1064 gtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcac 1117



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 313  tgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
            |||||||| ||||||||||  |||  |  ||||| |||||| ||||||||||||||
Sbjct: 1175 tgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccg 1230



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 238      gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcac 291
                ||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 25691020 gtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcac 25690967



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                        
Query: 313      tgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
                |||||||| ||||||||||  |||  |  ||||| |||||| ||||||||||||||
Sbjct: 25690909 tgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccg 25690854



to top

>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0010C01
          Length = 186185

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 238   gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcac 291
             ||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 93696 gtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcac 93643



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 313   tgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
             |||||||| ||||||||||  |||  |  ||||| |||||| ||||||||||||||
Sbjct: 93585 tgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccg 93530



to top

>dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F11, full
            insert sequence
          Length = 2038

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 238  gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcac 291
            ||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 1064 gtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcac 1117



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 313  tgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
            |||||||| ||||||||||  |||  |  ||||| |||||| ||||||||||||||
Sbjct: 1175 tgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccg 1230



to top

>dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063D05, full
           insert sequence
          Length = 1462

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 238 gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcac 291
           ||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 548 gtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcac 601



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 313 tgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
           |||||||| ||||||||||  |||  |  ||||| |||||| ||||||||||||||
Sbjct: 659 tgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccg 714



to top

>dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F10, full
            insert sequence
          Length = 2935

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 238  gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcac 291
            ||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||
Sbjct: 2683 gtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcac 2736



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 313  tgccccgtctgcaaggccgtcgtcgaggaggacaagctcgtcccgctctacggccg 368
            |||||||| ||||||||||  |||  |  ||||| |||||| ||||||||||||||
Sbjct: 2794 tgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccg 2849



to top

>gb|AY129244.1| Populus x canescens putative RING protein (RING) mRNA, complete cds
          Length = 1003

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 238 gtcacactctgcggccacctcttctgctggccatgcctctacaagtggctgcacatcca 296
           ||||| ||||| |||||||||| ||||||||| ||| ||||||||||||| ||| ||||
Sbjct: 283 gtcaccctctgtggccacctctactgctggccctgcatctacaagtggctccacgtcca 341



to top

>gb|DQ443177.1| Bombyx mori ring finger protein 5 mRNA, complete cds
          Length = 1084

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 247 tgcggccacctcttctgctggccatg 272
           ||||||||||||||||||||||||||
Sbjct: 239 tgcggccacctcttctgctggccatg 264



to top

>gb|AY347825.1| Malus x domestica clone 13-4 unknown mRNA
          Length = 322

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 247 tgcggccacctcttctgctggccatgcctctaca 280
           |||||||||||||| |||||||| ||||||||||
Sbjct: 270 tgcggccacctcttttgctggccttgcctctaca 303



to top

>ref|NM_118882.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT4G27470 mRNA, complete cds
          Length = 1102

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 238 gtcacactctgcggccacctcttctgctggccatgcctctacaagtgg 285
           ||||| |||||||| ||||| ||||||||||| ||| | |||||||||
Sbjct: 325 gtcactctctgcgggcaccttttctgctggccttgcatttacaagtgg 372



to top

>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 238   gtcacactctgcggccacctcttctgctggccatgcctctacaagtgg 285
             ||||| |||||||| ||||| ||||||||||| ||| | |||||||||
Sbjct: 46224 gtcactctctgcgggcaccttttctgctggccttgcatttacaagtgg 46271



to top

>emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, BAC clone F27G19 (ESSA project)
          Length = 82381

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 238   gtcacactctgcggccacctcttctgctggccatgcctctacaagtgg 285
             ||||| |||||||| ||||| ||||||||||| ||| | |||||||||
Sbjct: 59330 gtcactctctgcgggcaccttttctgctggccttgcatttacaagtgg 59377



to top

>gb|BT006285.1| Arabidopsis thaliana At4g27470 mRNA, complete cds
          Length = 732

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 238 gtcacactctgcggccacctcttctgctggccatgcctctacaagtgg 285
           ||||| |||||||| ||||| ||||||||||| ||| | |||||||||
Sbjct: 166 gtcactctctgcgggcaccttttctgctggccttgcatttacaagtgg 213



to top

>gb|DQ059124.1| Arabidopsis thaliana RING finger family protein (At4g27470) mRNA,
           complete cds
          Length = 732

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 238 gtcacactctgcggccacctcttctgctggccatgcctctacaagtgg 285
           ||||| |||||||| ||||| ||||||||||| ||| | |||||||||
Sbjct: 166 gtcactctctgcgggcaccttttctgctggccttgcatttacaagtgg 213



to top

>gb|BT002429.1| Arabidopsis thaliana putative RING zinc finger protein (At4g27470)
           mRNA, complete cds
          Length = 1087

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 238 gtcacactctgcggccacctcttctgctggccatgcctctacaagtgg 285
           ||||| |||||||| ||||| ||||||||||| ||| | |||||||||
Sbjct: 325 gtcactctctgcgggcaccttttctgctggccttgcatttacaagtgg 372



to top

>ref|XM_369667.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG05797.4) partial mRNA
          Length = 1626

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 455 ccgccccgcaggcagaccccaac 477
           |||||||||||||||||||||||
Sbjct: 101 ccgccccgcaggcagaccccaac 123



to top

>ref|NM_213037.1| Danio rerio zgc:73070 (zgc:73070), mRNA
          Length = 944

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 247 tgcggccacctcttctgctggccatgc 273
           ||||| |||||||||||||||||||||
Sbjct: 246 tgcggacacctcttctgctggccatgc 272



to top

>gb|BC059445.1| Danio rerio zgc:73070, mRNA (cDNA clone MGC:73070 IMAGE:4145700),
           complete cds
          Length = 944

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 247 tgcggccacctcttctgctggccatgc 273
           ||||| |||||||||||||||||||||
Sbjct: 246 tgcggacacctcttctgctggccatgc 272



to top

>ref|NM_189106.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1874

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 250  ggccacctcttctgctggccatgcctctacaagtggct 287
            |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 1106 ggccacctcttctgctggccttgcatataccagtggct 1143



to top

>ref|XM_507140.1| PREDICTED Oryza sativa (japonica cultivar-group), P0577B11.136 mRNA
          Length = 1953

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 250  ggccacctcttctgctggccatgcctctacaagtggct 287
            |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 1180 ggccacctcttctgctggccttgcatataccagtggct 1217



to top

>ref|NM_192062.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1479

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 55  gcgccgtcccctccctccgcccggccgccgctcg 88
           ||||||||||||||||||| |  |||||||||||
Sbjct: 179 gcgccgtcccctccctccggctcgccgccgctcg 146



to top

>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0043H23, complete sequence
          Length = 134097

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 51    cgccgcgccgtcccctccctccgcccggcc 80
             ||||||||||||||| || |||||||||||
Sbjct: 78928 cgccgcgccgtccccaccatccgcccggcc 78899



to top

>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08,
              complete sequence
          Length = 152527

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 51     cgccgcgccgtcccctccctccgcccggcc 80
              ||||||||||||||| || |||||||||||
Sbjct: 114406 cgccgcgccgtccccaccatccgcccggcc 114377



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 250     ggccacctcttctgctggccatgcctctacaagtggct 287
               |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 3680486 ggccacctcttctgctggccttgcatataccagtggct 3680449



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 51      cgccgcgccgtcccctccctccgcccggcc 80
               ||||||||||||||| || |||||||||||
Sbjct: 7376151 cgccgcgccgtccccaccatccgcccggcc 7376122



to top

>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0445E10
          Length = 145912

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 55    gcgccgtcccctccctccgcccggccgccgctcg 88
             ||||||||||||||||||| |  |||||||||||
Sbjct: 10580 gcgccgtcccctccctccggctcgccgccgctcg 10547



to top

>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ9990_A01
          Length = 101684

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 250  ggccacctcttctgctggccatgcctctacaagtggct 287
            |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 3983 ggccacctcttctgctggccttgcatataccagtggct 3946



to top

>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0019E03
          Length = 152092

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 55     gcgccgtcccctccctccgcccggccgccgctcg 88
              ||||||||||||||||||| |  |||||||||||
Sbjct: 141785 gcgccgtcccctccctccggctcgccgccgctcg 141752



to top

>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 250    ggccacctcttctgctggccatgcctctacaagtggct 287
              |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 158992 ggccacctcttctgctggccttgcatataccagtggct 158955



to top

>dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D12, full
            insert sequence
          Length = 1874

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 250  ggccacctcttctgctggccatgcctctacaagtggct 287
            |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 1106 ggccacctcttctgctggccttgcatataccagtggct 1143



to top

>dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G17, full
            insert sequence
          Length = 2524

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 250  ggccacctcttctgctggccatgcctctacaagtggct 287
            |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 1124 ggccacctcttctgctggccttgcatataccagtggct 1087



to top

>dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G04, full
            insert sequence
          Length = 1952

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 250  ggccacctcttctgctggccatgcctctacaagtggct 287
            |||||||||||||||||||| ||| | ||| |||||||
Sbjct: 1179 ggccacctcttctgctggccttgcatataccagtggct 1216



to top

>ref|XM_478618.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 480

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 169 agcgtggccggcgacggcggg 189
           |||||||||||||||||||||
Sbjct: 338 agcgtggccggcgacggcggg 358



to top

>ref|XM_478541.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2283

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 172 gtggccggcgacggcgggggc 192
           |||||||||||||||||||||
Sbjct: 135 gtggccggcgacggcgggggc 155



to top

>ref|XM_430124.1| PREDICTED: Gallus gallus LOC424079 (LOC424079), mRNA
          Length = 1590

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 39  gccggcgggaggcgccgcgcc 59
           |||||||||||||||||||||
Sbjct: 116 gccggcgggaggcgccgcgcc 136



to top

>emb|BX927413.10| Zebrafish DNA sequence from clone DKEY-29D8 in linkage group 2,
             complete sequence
          Length = 96453

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 495   caaccctaacccctggttcat 515
             |||||||||||||||||||||
Sbjct: 25057 caaccctaacccctggttcat 25037



to top

>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three
              novel genes, the 5' end of a novel gene, a novel pseudogene
              and seven CpG islands, complete sequence
          Length = 165696

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 62     cccctccctccgcccggccgccgct 86
              |||| ||||||||||||||||||||
Sbjct: 158373 ccccgccctccgcccggccgccgct 158349



to top

>gb|AY267681.1| Bigelowiella natans phosphoglycerate kinase 1 mRNA, complete cds;
            nuclear gene for plastid product
          Length = 1680

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 332  tcgtcgaggaggacaagctcg 352
            |||||||||||||||||||||
Sbjct: 1032 tcgtcgaggaggacaagctcg 1052



to top

>gb|AF521878.1| Streptomyces narbonensis desosamine biosynthetic gene cluster,
            partial sequence
          Length = 17665

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 441  gcagcggcccgccaccgccccgcag 465
            ||||| |||||||||||||||||||
Sbjct: 8707 gcagccgcccgccaccgccccgcag 8683



to top

>gb|AE005773.1| Caulobacter crescentus CB15 section 99 of 359 of the complete genome
          Length = 10431

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 435  caccgggcagcggcccgccaccgccccgc 463
            |||||||||  ||||||||||||||||||
Sbjct: 3808 caccgggcacaggcccgccaccgccccgc 3780



to top

>gb|AE011681.1| Xanthomonas axonopodis pv. citri str. 306,  section 59 of 469 of the
            complete genome
          Length = 10175

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  cgtcacactctgcggccacct 257
            |||||||||||||||||||||
Sbjct: 2429 cgtcacactctgcggccacct 2449



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 71      ccgcccggccgccgctcgacg 91
               |||||||||||||||||||||
Sbjct: 1041962 ccgcccggccgccgctcgacg 1041982



to top

>gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, complete sequence
          Length = 273403

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      ctcgtcctctcccatcccctc 27
              |||||||||||||||||||||
Sbjct: 179420 ctcgtcctctcccatcccctc 179440



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 169      agcgtggccggcgacggcggg 189
                |||||||||||||||||||||
Sbjct: 21474202 agcgtggccggcgacggcggg 21474182



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      gtggccggcgacggcgggggc 192
                |||||||||||||||||||||
Sbjct: 20916573 gtggccggcgacggcgggggc 20916593



to top

>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0039D04
          Length = 184408

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    gtggccggcgacggcgggggc 192
              |||||||||||||||||||||
Sbjct: 127363 gtggccggcgacggcgggggc 127383



to top

>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1729_E01
          Length = 155527

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    agcgtggccggcgacggcggg 189
              |||||||||||||||||||||
Sbjct: 118258 agcgtggccggcgacggcggg 118238



to top

>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1582_D10
          Length = 103475

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   agcgtggccggcgacggcggg 189
             |||||||||||||||||||||
Sbjct: 11986 agcgtggccggcgacggcggg 11966



to top

>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1131_E05
          Length = 122216

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   gtggccggcgacggcgggggc 192
             |||||||||||||||||||||
Sbjct: 44488 gtggccggcgacggcgggggc 44508



to top

>dbj|AK060565.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H08, full
           insert sequence
          Length = 2283

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 172 gtggccggcgacggcgggggc 192
           |||||||||||||||||||||
Sbjct: 135 gtggccggcgacggcgggggc 155



to top

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     gcccgcaccgccggcgggagg 50
              |||||||||||||||||||||
Sbjct: 121435 gcccgcaccgccggcgggagg 121455



to top

>dbj|AP004524.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08O18, TM0052a,
            complete sequence
          Length = 20200

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 263  gctggccatgcctctacaagtggctgcacatccactc 299
            ||||||| ||||| ||||||||||| ||| |||||||
Sbjct: 1819 gctggccttgcctttacaagtggcttcacttccactc 1783



to top

>ref|NM_188389.1| Oryza sativa (japonica cultivar-group), Ozsa8115 predicted mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 gagcgcgagcgggagcgtgg 175
           ||||||||||||||||||||
Sbjct: 108 gagcgcgagcgggagcgtgg 89



to top

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 428    atcggcccaccgggcagcgg 447
              ||||||||||||||||||||
Sbjct: 995575 atcggcccaccgggcagcgg 995556



to top

>ref|NM_204414.1| Gallus gallus Y box binding protein 1 (YBX1), mRNA
          Length = 1525

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  ccgccggcgggaggcgccgc 56
           ||||||||||||||||||||
Sbjct: 279 ccgccggcgggaggcgccgc 260



to top

>gb|AY441041.1| Armigeres subalbatus ASAP ID: 41793 conserved unknown mRNA sequence
          Length = 687

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ttcgagtgcaacatatgctt 215
           ||||||||||||||||||||
Sbjct: 579 ttcgagtgcaacatatgctt 598



to top

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
               sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     tcgaggaggacaagctcgtc 354
               ||||||||||||||||||||
Sbjct: 1455207 tcgaggaggacaagctcgtc 1455188



to top

>ref|XM_876058.1| PREDICTED: Bos taurus similar to Peroxisome assembly protein 10
           (Peroxin-10) (RING finger protein 69), transcript
           variant 3 (LOC614539), mRNA
          Length = 2501

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 240 cacactctgcggccacctcttctgctgg 267
           ||||| |||||||||||| |||||||||
Sbjct: 849 cacaccctgcggccacctgttctgctgg 876



to top

>ref|XM_865404.1| PREDICTED: Bos taurus similar to Peroxisome assembly protein 10
           (Peroxin-10) (RING finger protein 69), transcript
           variant 2 (LOC614539), mRNA
          Length = 3069

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 240 cacactctgcggccacctcttctgctgg 267
           ||||| |||||||||||| |||||||||
Sbjct: 849 cacaccctgcggccacctgttctgctgg 876



to top

>ref|XM_975664.1| PREDICTED: Mus musculus extraembryonic, spermatogenesis, homeobox 1,
            transcript variant 1 (Esx1), mRNA
          Length = 1193

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1113 ttccccaaccccaaccctaacccc 1136



to top

>ref|XM_975726.1| PREDICTED: Mus musculus extraembryonic, spermatogenesis, homeobox 1,
            transcript variant 3 (Esx1), mRNA
          Length = 1676

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1447 ttccccaaccccaaccctaacccc 1470



to top

>ref|XM_975696.1| PREDICTED: Mus musculus extraembryonic, spermatogenesis, homeobox 1,
            transcript variant 2 (Esx1), mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1358 ttccccaaccccaaccctaacccc 1381



to top

>ref|XM_755315.1| Ustilago maydis 521 hypothetical protein (UM04261.1) partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 353  tcccgctctacggccgtggc 372
            ||||||||||||||||||||
Sbjct: 1109 tcccgctctacggccgtggc 1128



to top

>ref|XM_571045.1| Cryptococcus neoformans var. neoformans JEC21 hexose
           transport-related protein (CNE05180) partial mRNA
          Length = 1823

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 tcgaggaggacaagctcgtc 354
           ||||||||||||||||||||
Sbjct: 921 tcgaggaggacaagctcgtc 902



to top

>gb|AC122867.4| Mus musculus BAC clone RP23-146P6 from 8, complete sequence
          Length = 180742

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 481    cacttccccaacgccaaccc 500
              ||||||||||||||||||||
Sbjct: 106825 cacttccccaacgccaaccc 106844



to top

>gb|AC124198.2| Mus musculus BAC clone RP23-306E4 from 8, complete sequence
          Length = 172546

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    gtcctctcccatcccctctc 29
             ||||||||||||||||||||
Sbjct: 89258 gtcctctcccatcccctctc 89277



to top

>emb|AM040274.1| Capsicum chinense mRNA for putative zinc finger protein (rzfp gene)
          Length = 955

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 232 cccatcgtcacactctgcggccacctcttctgctggccatgcct 275
           ||||| || |||||||| || || |||| |||||||||||||||
Sbjct: 262 cccattgtgacactctgtggtcatctctactgctggccatgcct 305



to top

>emb|AL049575.7|HSDJ316D7 Human DNA sequence from clone RP1-316D7 on chromosome 11p13 Contains
             part of the gene for G2 protein, ESTs, STSs and GSSs,
             complete sequence
          Length = 94835

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    gtcctctcccatcccctctc 29
             ||||||||||||||||||||
Sbjct: 54030 gtcctctcccatcccctctc 54011



to top

>emb|CR382384.18| Zebrafish DNA sequence from clone CH211-15B7 in linkage group 8,
             complete sequence
          Length = 124327

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 246   ctgcggccacctcttctgctggccatgc 273
             |||||||||| ||| |||||||||||||
Sbjct: 20574 ctgcggccacatctactgctggccatgc 20547



to top

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttcgagctgccgcaggagcc 233
              ||||||||||||||||||||
Sbjct: 492521 ttcgagctgccgcaggagcc 492540



to top

>ref|NM_007957.1| Mus musculus extraembryonic, spermatogenesis, homeobox 1 (Esx1), mRNA
          Length = 1720

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1446 ttccccaaccccaaccctaacccc 1469



to top

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 176     ccggcgacggcgggggcagcttcg 199
               |||||||||||||| |||||||||
Sbjct: 1132253 ccggcgacggcgggcgcagcttcg 1132276



to top

>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048D11, from chromosome 3, complete sequence
          Length = 158911

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   ggcccaccgggcagcggccc 450
             ||||||||||||||||||||
Sbjct: 52326 ggcccaccgggcagcggccc 52345



to top

>ref|XM_683844.1| PREDICTED: Danio rerio similar to Rnf10 protein (LOC560444), mRNA
          Length = 2430

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 246 ctgcggccacctcttctgctggccatgc 273
           |||||||||| ||| |||||||||||||
Sbjct: 723 ctgcggccacatctactgctggccatgc 750



to top

>emb|AL672275.14| Mouse DNA sequence from clone RP23-89D4 on chromosome X, complete
             sequence
          Length = 165401

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 484   ttccccaacgccaaccctaacccc 507
             ||||||||| ||||||||||||||
Sbjct: 35428 ttccccaaccccaaccctaacccc 35405



to top

>emb|CR391085.1| Gallus gallus finished cDNA, clone ChEST68a10
          Length = 1513

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  ccgccggcgggaggcgccgc 56
           ||||||||||||||||||||
Sbjct: 279 ccgccggcgggaggcgccgc 260



to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   ggcgtgccgcccggggccga 419
             ||||||||||||||||||||
Sbjct: 28742 ggcgtgccgcccggggccga 28761



to top

>gb|AY009149.1| Ustilago maydis chitinase (CTS1) gene, complete cds
          Length = 2309

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 353  tcccgctctacggccgtggc 372
            ||||||||||||||||||||
Sbjct: 1443 tcccgctctacggccgtggc 1462



to top

>gb|AC122714.2| Homo sapiens chromosome 5 clone RP11-451H23, complete sequence
          Length = 190024

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    cgtggccggcgacggcgggg 190
              ||||||||||||||||||||
Sbjct: 138455 cgtggccggcgacggcgggg 138436



to top

>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0466B10
          Length = 151806

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   gagcgcgagcgggagcgtgg 175
             ||||||||||||||||||||
Sbjct: 73944 gagcgcgagcgggagcgtgg 73963



to top

>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031E09
          Length = 176349

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   gagcgcgagcgggagcgtgg 175
             ||||||||||||||||||||
Sbjct: 30413 gagcgcgagcgggagcgtgg 30432



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 319    gtctgcaaggccgtcgtcgaggag 342
              |||| |||||||||||||||||||
Sbjct: 639106 gtctacaaggccgtcgtcgaggag 639083



to top

>dbj|AB083323.1| Macaca fascicularis pex10 mRNA for Peroxisome assembly protein 10,
           complete cds
          Length = 1321

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 240 cacactctgcggccacctcttctgctgg 267
           ||||| |||||||||||| |||||||||
Sbjct: 927 cacaccctgcggccacctgttctgctgg 954



to top

>gb|AF017735.1|AF017735 Mus musculus paired-like homeobox (Epx) mRNA, transcript A, complete
            cds
          Length = 1408

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1158 ttccccaaccccaaccctaacccc 1181



to top

>gb|AF017734.1|AF017734 Mus musculus paired-like homeobox (Epx) mRNA, transcript B, complete
            cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1075 ttccccaaccccaaccctaacccc 1098



to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     gagcgtggccggcgacggcg 187
               ||||||||||||||||||||
Sbjct: 4674317 gagcgtggccggcgacggcg 4674336



to top

>gb|AF085715.1|AF085715 Mus musculus homeobox protein SPX1 mRNA, complete cds
          Length = 1616

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1359 ttccccaaccccaaccctaacccc 1382



to top

>gb|AF004211.1|AF004211 Mus musculus paired-like homeodomain containing protein (Etx) mRNA,
            complete cds
          Length = 1720

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 484  ttccccaacgccaaccctaacccc 507
            ||||||||| ||||||||||||||
Sbjct: 1446 ttccccaaccccaaccctaacccc 1469



to top

>dbj|D26328.1|CHKESTPC13 Gallus gallus mRNA for mouse dbpB/YB-1 protein homologue, complete
           cds, clone CLFEST34
          Length = 1525

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  ccgccggcgggaggcgccgc 56
           ||||||||||||||||||||
Sbjct: 279 ccgccggcgggaggcgccgc 260



to top

>gb|L13032.1|CHKCSYB1 Gallus gallus YB-1 protein mRNA, complete cds
          Length = 1524

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  ccgccggcgggaggcgccgc 56
           ||||||||||||||||||||
Sbjct: 273 ccgccggcgggaggcgccgc 254


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,580,652
Number of Sequences: 3902068
Number of extensions: 3580652
Number of successful extensions: 90613
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88242
Number of HSP's gapped (non-prelim): 2370
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top