ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart11a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ICAM2_HUMAN (P13598) Intercellular adhesion molecule 2 precursor... 29 8.4

>ICAM2_HUMAN (P13598) Intercellular adhesion molecule 2 precursor (ICAM-2)|
           (CD102 antigen)
          Length = 275

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +3

Query: 345 STTCLTGS-GKRSEFLSVLLVSQEAAWKRYCP---SYDAIFVCK*YCQRKTEFISSSL 506
           STTC     G     L+ +L+ ++A WK Y     S+D +  C   C  K E ++S++
Sbjct: 49  STTCNQPEVGGLETSLNKILLDEQAQWKHYLVSNISHDTVLQCHFTCSGKQESMNSNV 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,299,305
Number of Sequences: 219361
Number of extensions: 1272883
Number of successful extensions: 3071
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3071
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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