ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart11a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK122146.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
2dbj|AK063787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
3ref|XM_479340.1| Oryza sativa (japonica cultivar-group), mRNA 113 7e-22
4gb|BT016940.1| Zea mays clone E04912704F04.c mRNA sequence 111 3e-21
5dbj|AK058954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
6gb|AY111015.1| Zea mays CL4951_1 mRNA sequence 103 6e-19
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
8dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
9dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
12gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
13gb|BC037460.1| Mus musculus disrupted in renal carcinoma 2 (huma... 42 2.0
14gb|AC129574.8| Mus musculus chromosome 16, clone RP23-78C2, comp... 42 2.0
15gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
16emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.0
17dbj|AK172331.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.0
18dbj|AK034214.1| Mus musculus adult male diencephalon cDNA, RIKEN... 42 2.0
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22gb|AF269239.1|AF269239 Mus musculus plasmid rescue fragment sequ... 42 2.0
23dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 2.0
24dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
25dbj|AK073940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
26gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complet... 42 2.0
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
28emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
29ref|NM_153550.2| Mus musculus disrupted in renal carcinoma 2 (hu... 42 2.0
30ref|XM_482705.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.8
31gb|AY731532.1| Arachis hypogaea clone PM714 microsatellite sequence 40 7.8
32gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete... 40 7.8
33gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, comp... 40 7.8
34emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chro... 40 7.8
35gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
36gb|AF451895.1| Zea mays LIGULELESS1 (lg1) gene, complete cds 40 7.8
37gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, comp... 40 7.8
38gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, compl... 40 7.8
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
40gb|AE004490.1| Pseudomonas aeruginosa PAO1, section 51 of 529 of... 40 7.8
41gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, com... 40 7.8
42dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
43dbj|AK069964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
44dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
45gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74... 40 7.8
46gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, r... 40 7.8
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
48emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8
49emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8
50emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on ch... 40 7.8
51gb|U89496.1|ZMU89496 Zea mays liguleless1 protein (liguleless1) ... 40 7.8
52emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 7.8
53gb|J05100.1|SRAAFPG Sea raven (H.americanus) antifreeze protein ... 40 7.8 
>dbj|AK122146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B10, full
           insert sequence
          Length = 534

 Score =  123 bits (62), Expect = 7e-25
 Identities = 137/162 (84%)
 Strand = Plus / Plus

                                                                       
Query: 222 agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 281
           ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 180 agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 239

                                                                       
Query: 282 tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtg 341
           ||| |||||||||||||||||| || ||||| | |||||||||||| ||||| || ||||
Sbjct: 240 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgataggccgtg 299

                                                     
Query: 342 ggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 383
           || | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 300 gggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 341
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>dbj|AK063787.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-E01, full
           insert sequence
          Length = 622

 Score =  123 bits (62), Expect = 7e-25
 Identities = 137/162 (84%)
 Strand = Plus / Plus

                                                                       
Query: 222 agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 281
           ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 96  agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 155

                                                                       
Query: 282 tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtg 341
           ||| |||||||||||||||||| || ||||| | |||||||||||| ||||| || ||||
Sbjct: 156 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgataggccgtg 215

                                                     
Query: 342 ggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 383
           || | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 216 gggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 257
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>ref|XM_479340.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 483

 Score =  113 bits (57), Expect = 7e-22
 Identities = 162/197 (82%)
 Strand = Plus / Plus

                                                                       
Query: 184 agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 243
           |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 98  agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 157

                                                                       
Query: 244 gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 303
            | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 158 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 217

                                                                       
Query: 304 tgcgcttgctggctccagcttgttcatgattggtcgtgggatctacaacatgtctaacgg 363
           |||||| |||||| ||||||||||||||||||| |||||  | |||||||||||  ||||
Sbjct: 218 tgcgctggctggcaccagcttgttcatgattggccgtggagtttacaacatgtcccacgg 277

                            
Query: 364 gatcgggaaaaaggagt 380
            || |||||||| ||||
Sbjct: 278 tattgggaaaaaagagt 294



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 506 tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 550
           ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 397 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 441
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>gb|BT016940.1| Zea mays clone E04912704F04.c mRNA sequence
          Length = 462

 Score =  111 bits (56), Expect = 3e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 231 atttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcggtcatctccg 290
           ||||||||||| ||| |||||| | | |||| ||||| || ||||||| | ||| |||||
Sbjct: 316 atttccagaacatgaccaagcacacctacctgaaagggcgctacgatgtgatcacctccg 257

                                                                       
Query: 291 ttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtgggatctaca 350
           ||||||| || ||||| ||||||| ||||||| ||||||||||||| |||||  | ||||
Sbjct: 256 ttgccatccctcttgcacttgctgcctccagcatgttcatgattgggcgtggagtttaca 197

                                           
Query: 351 acatgtctaacgggatcgggaaaaaggagtga 382
           |||||||| | || || |||||||||||||||
Sbjct: 196 acatgtctcatggaattgggaaaaaggagtga 165
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>dbj|AK058954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-B01, full
           insert sequence
          Length = 483

 Score =  105 bits (53), Expect = 2e-19
 Identities = 149/181 (82%)
 Strand = Plus / Plus

                                                                       
Query: 200 ccacgtgagaagcttgttcagaagcagcagtatttccagaacttgagcaagcatatccac 259
           ||||||||||||||  || || | ||||| ||||| ||||| || | |||||| | | ||
Sbjct: 114 ccacgtgagaagctgtttaagcaacagcaatattttcagaatttaaccaagcacacctac 173

                                                                       
Query: 260 cttaaaggccgttacgatgcggtcatctccgttgccattccccttgcgcttgctggctcc 319
           || || || |||||||||| | |||  || |||||||||||||||||||| |||||| ||
Sbjct: 174 ctgaaggggcgttacgatgtgatcacatctgttgccattccccttgcgctggctggcacc 233

                                                                       
Query: 320 agcttgttcatgattggtcgtgggatctacaacatgtctaacgggatcgggaaaaaggag 379
           ||||||||||||||||| |||||  | |||||||||||  |||| || |||||||| |||
Sbjct: 234 agcttgttcatgattggccgtggagtttacaacatgtcccacggtattgggaaaaaagag 293

            
Query: 380 t 380
           |
Sbjct: 294 t 294



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 506 tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 550
           ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 397 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 441
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>gb|AY111015.1| Zea mays CL4951_1 mRNA sequence
          Length = 656

 Score =  103 bits (52), Expect = 6e-19
 Identities = 127/152 (83%)
 Strand = Plus / Plus

                                                                       
Query: 231 atttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcggtcatctccg 290
           ||||||||||| ||| |||||| | | |||| ||||| || ||||||| | ||| |||||
Sbjct: 133 atttccagaacatgaccaagcacacctacctgaaagggcgctacgatgtgatcacctccg 192

                                                                       
Query: 291 ttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtgggatctaca 350
           ||||||| || ||||| ||||||| ||||||| ||||||||||||| |||||  | ||||
Sbjct: 193 ttgccatccctcttgcacttgctgcctccagcatgttcatgattgggcgtggagtttaca 252

                                           
Query: 351 acatgtctaacgggatcgggaaaaaggagtga 382
           |||||||| | || || ||||| |||||||||
Sbjct: 253 acatgtctcatggaattgggaagaaggagtga 284
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                            
Query: 184      agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 243
                |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 26987763 agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 26987822

                                                                            
Query: 244      gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 303
                 | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 26987823 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 26987882

                                                
Query: 304      tgcgcttgctggctccagcttgttcatgattg 335
                |||||| |||||| ||||||||||||||||||
Sbjct: 26987883 tgcgctggctggcaccagcttgttcatgattg 26987914



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 506      tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 550
                ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 26988156 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 26988200
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>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1316_A04
          Length = 87144

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                         
Query: 184   agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 243
             |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 52241 agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 52300

                                                                         
Query: 244   gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 303
              | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 52301 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 52360

                                             
Query: 304   tgcgcttgctggctccagcttgttcatgattg 335
             |||||| |||||| ||||||||||||||||||
Sbjct: 52361 tgcgctggctggcaccagcttgttcatgattg 52392



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 506   tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 550
             ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 52634 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 52678
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>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0503D09
          Length = 144443

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                          
Query: 184    agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 243
              |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 136354 agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 136413

                                                                          
Query: 244    gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 303
               | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 136414 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 136473

                                              
Query: 304    tgcgcttgctggctccagcttgttcatgattg 335
              |||||| |||||| ||||||||||||||||||
Sbjct: 136474 tgcgctggctggcaccagcttgttcatgattg 136505



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 506    tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 550
              ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 136747 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 136791
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                           
Query: 222     agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 281
               ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 3345407 agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 3345348

                                                                   
Query: 282     tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgat 333
               ||| |||||||||||||||||| || ||||| | |||||||||||| |||||
Sbjct: 3345347 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgat 3345296



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 338     cgtgggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 383
               |||||| | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 3345195 cgtggggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 3345150
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>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ9003_G05
          Length = 141860

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                         
Query: 222   agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 281
             ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 94267 agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 94208

                                                                 
Query: 282   tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgat 333
             ||| |||||||||||||||||| || ||||| | |||||||||||| |||||
Sbjct: 94207 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgat 94156



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 338   cgtgggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 383
             |||||| | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 94055 cgtggggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 94010
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>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0052H02, complete sequence
          Length = 159632

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 117    cgccgccgccggcaaccccgt 137
              |||||||||||||||||||||
Sbjct: 116562 cgccgccgccggcaaccccgt 116582
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>gb|BC037460.1| Mus musculus disrupted in renal carcinoma 2 (human), mRNA (cDNA
           clone MGC:47126 IMAGE:4190539), complete cds
          Length = 2073

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccgtcgcttcccggcccctgcgcgc 158
           ||||||| |||||||||||||||||
Sbjct: 192 ccgtcgcctcccggcccctgcgcgc 168
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>gb|AC129574.8| Mus musculus chromosome 16, clone RP23-78C2, complete sequence
          Length = 214649

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 134    ccgtcgcttcccggcccctgcgcgc 158
              ||||||| |||||||||||||||||
Sbjct: 161091 ccgtcgcctcccggcccctgcgcgc 161067
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>gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0060B06, complete sequence
          Length = 162568

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    cagatccacccgccgccgccg 127
              |||||||||||||||||||||
Sbjct: 102730 cagatccacccgccgccgccg 102710
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   ctccagatccacccgccgccg 124
             |||||||||||||||||||||
Sbjct: 26287 ctccagatccacccgccgccg 26267
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>dbj|AK172331.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830201N18 product:disrupted in renal
           carcinoma 2 (human), full insert sequence
          Length = 2090

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccgtcgcttcccggcccctgcgcgc 158
           ||||||| |||||||||||||||||
Sbjct: 233 ccgtcgcctcccggcccctgcgcgc 209
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>dbj|AK034214.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330164E21 product:hypothetical
           Trypsin-like serine proteases structure containing
           protein, full insert sequence
          Length = 4555

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccgtcgcttcccggcccctgcgcgc 158
           ||||||| |||||||||||||||||
Sbjct: 218 ccgtcgcctcccggcccctgcgcgc 194
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 104      ctccagatccacccgccgccg 124
                |||||||||||||||||||||
Sbjct: 24905702 ctccagatccacccgccgccg 24905682
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 107      cagatccacccgccgccgccg 127
                |||||||||||||||||||||
Sbjct: 20559936 cagatccacccgccgccgccg 20559916



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 117     cgccgccgccggcaaccccgt 137
               |||||||||||||||||||||
Sbjct: 2836755 cgccgccgccggcaaccccgt 2836775



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 103     cctccagatccacccgccgccgcc 126
               ||||||||||||||| ||||||||
Sbjct: 5306009 cctccagatccaccctccgccgcc 5305986
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 104      ctccagatccacccgccgccg 124
                |||||||||||||||||||||
Sbjct: 17516253 ctccagatccacccgccgccg 17516273



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 111      tccacccgccgccgccggca 130
                ||||||||||||||||||||
Sbjct: 22026956 tccacccgccgccgccggca 22026975
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>gb|AF269239.1|AF269239 Mus musculus plasmid rescue fragment sequence
          Length = 875

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 468 tattgtcagagaaagactgag 488
           |||||||||||||||||||||
Sbjct: 647 tattgtcagagaaagactgag 667
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     ccgccgccgccggcaaccccg 136
               |||||||||||||||||||||
Sbjct: 1839030 ccgccgccgccggcaaccccg 1839010
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>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0690C12
          Length = 139693

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 104    ctccagatccacccgccgccg 124
              |||||||||||||||||||||
Sbjct: 127098 ctccagatccacccgccgccg 127118
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>dbj|AK073940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076E07, full
           insert sequence
          Length = 1865

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 107 cagatccacccgccgccgccg 127
           |||||||||||||||||||||
Sbjct: 372 cagatccacccgccgccgccg 352
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>gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complete sequence
          Length = 190949

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 487    agttcatttccagttctcttttgtt 511
              ||||||||||||| |||||||||||
Sbjct: 173908 agttcatttccagctctcttttgtt 173932
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 107      cagatccacccgccgccgccg 127
                |||||||||||||||||||||
Sbjct: 20870171 cagatccacccgccgccgccg 20870151



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 117     cgccgccgccggcaaccccgt 137
               |||||||||||||||||||||
Sbjct: 2845786 cgccgccgccggcaaccccgt 2845806



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 103     cctccagatccacccgccgccgcc 126
               ||||||||||||||| ||||||||
Sbjct: 5372486 cctccagatccaccctccgccgcc 5372463
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 104    ctccagatccacccgccgccg 124
              |||||||||||||||||||||
Sbjct: 167418 ctccagatccacccgccgccg 167398
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>ref|NM_153550.2| Mus musculus disrupted in renal carcinoma 2 (human) (Dirc2), mRNA
          Length = 4555

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccgtcgcttcccggcccctgcgcgc 158
           ||||||| |||||||||||||||||
Sbjct: 218 ccgtcgcctcccggcccctgcgcgc 194
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>ref|XM_482705.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 579

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 tccacccgccgccgccggca 130
           ||||||||||||||||||||
Sbjct: 560 tccacccgccgccgccggca 541
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>gb|AY731532.1| Arachis hypogaea clone PM714 microsatellite sequence
          Length = 299

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 ccgccgccgccggcaacccc 135
           ||||||||||||||||||||
Sbjct: 165 ccgccgccgccggcaacccc 184
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>gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete sequence
          Length = 191907

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 535    agcaaattgatgctaaactg 554
              ||||||||||||||||||||
Sbjct: 161842 agcaaattgatgctaaactg 161861
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>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence
          Length = 196167

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 487    agttcatttccagttctcttttgt 510
              |||||||||||||||||| |||||
Sbjct: 139750 agttcatttccagttctcatttgt 139773
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>emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chromosome 6 Contains a
            novel gene, complete sequence
          Length = 148503

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  attgtcagagaaagactgag 488
            ||||||||||||||||||||
Sbjct: 3930 attgtcagagaaagactgag 3911
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>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0088N01, complete sequence
          Length = 123954

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   cctccagatccacccgccgccgcc 126
             ||||||||||||||| ||||||||
Sbjct: 44206 cctccagatccaccctccgccgcc 44229
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>gb|AF451895.1| Zea mays LIGULELESS1 (lg1) gene, complete cds
          Length = 7142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ccgccgccgccggcaacccc 135
            ||||||||||||||||||||
Sbjct: 3742 ccgccgccgccggcaacccc 3761
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>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence
          Length = 157442

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  cagcaaattgatgctaaact 553
            ||||||||||||||||||||
Sbjct: 7293 cagcaaattgatgctaaact 7312
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>gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, complete sequence
          Length = 165698

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 461    caaataatattgtcagagaaagac 484
              |||||||| |||||||||||||||
Sbjct: 127257 caaataattttgtcagagaaagac 127234
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    ggatggcgcacgaagaggca 190
              ||||||||||||||||||||
Sbjct: 416147 ggatggcgcacgaagaggca 416128
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>gb|AE004490.1| Pseudomonas aeruginosa PAO1, section 51 of 529 of the complete genome
          Length = 11445

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   cgccgccggcaaccccgtcgcttc 143
             ||||||||||||||||| ||||||
Sbjct: 10128 cgccgccggcaaccccggcgcttc 10105
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>gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, complete sequence
          Length = 192490

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 461  caaataatattgtcagagaaagac 484
            |||||||| |||||||||||||||
Sbjct: 7969 caaataattttgtcagagaaagac 7946
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>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_H01
          Length = 128124

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    tccacccgccgccgccggca 130
              ||||||||||||||||||||
Sbjct: 112705 tccacccgccgccgccggca 112724
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>dbj|AK069964.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G05, full
           insert sequence
          Length = 3272

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 103 cctccagatccacccgccgccgcc 126
           ||||||||||||||| ||||||||
Sbjct: 51  cctccagatccaccctccgccgcc 74
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>dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F03, full
            insert sequence
          Length = 3579

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  tccacccgccgccgccggca 130
            ||||||||||||||||||||
Sbjct: 2867 tccacccgccgccgccggca 2886
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>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete
              sequence
          Length = 157875

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    agcaaattgatgctaaactg 554
              ||||||||||||||||||||
Sbjct: 154663 agcaaattgatgctaaactg 154644
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>gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, region 38C1-38C2, P1 clones
             DS01096 and DS00956, complete sequence
          Length = 106735

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   agcaaattgatgctaaactg 554
             ||||||||||||||||||||
Sbjct: 74985 agcaaattgatgctaaactg 75004
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    ggatggcgcacgaagaggca 190
              ||||||||||||||||||||
Sbjct: 416147 ggatggcgcacgaagaggca 416128
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    ggatggcgcacgaagaggca 190
              ||||||||||||||||||||
Sbjct: 149198 ggatggcgcacgaagaggca 149179
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>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    ggatggcgcacgaagaggca 190
              ||||||||||||||||||||
Sbjct: 130625 ggatggcgcacgaagaggca 130644
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>emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on chromosome X, complete
             sequence
          Length = 143779

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ctcttttgttggtatttgtg 521
             ||||||||||||||||||||
Sbjct: 54460 ctcttttgttggtatttgtg 54479
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>gb|U89496.1|ZMU89496 Zea mays liguleless1 protein (liguleless1) mRNA, complete cds
          Length = 1411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 ccgccgccgccggcaacccc 135
           ||||||||||||||||||||
Sbjct: 349 ccgccgccgccggcaacccc 368
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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
              sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 510    ttggtatttgtggatatttgatgt 533
              ||||||||| ||||||||||||||
Sbjct: 165506 ttggtatttctggatatttgatgt 165529
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>gb|J05100.1|SRAAFPG Sea raven (H.americanus) antifreeze protein type II gene, complete
           cds
          Length = 2420

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 370 gaaaaaggagtgaatttctg 389
           ||||||||||||||||||||
Sbjct: 26  gaaaaaggagtgaatttctg 7


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,406,388
Number of Sequences: 3902068
Number of extensions: 5406388
Number of successful extensions: 110466
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109238
Number of HSP's gapped (non-prelim): 1224
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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