ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart10h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic ... 42 9e-04
2S22A4_MOUSE (Q9Z306) Organic cation/carnitine transporter 1 (Sol... 40 0.004
3OAT6_MOUSE (Q80UJ1) Solute carrier family 22 member 20 (Organic ... 40 0.004
4S22A9_HUMAN (Q8IVM8) Solute carrier family 22 member 9 (Organic ... 39 0.007
5S22A5_MOUSE (Q9Z0E8) Organic cation/carnitine transporter 2 (Sol... 39 0.012
6S22A4_RAT (Q9R141) Organic cation/carnitine transporter 1 (Solut... 38 0.016
7S22A4_HUMAN (Q9H015) Organic cation/carnitine transporter 1 (Sol... 37 0.036
8S22A5_HUMAN (O76082) Organic cation/carnitine transporter 2 (Sol... 37 0.036
9OCTN3_MOUSE (Q9WTN6) Organic cation/carnitine transporter 3 (Sol... 37 0.036
10S22A5_RAT (O70594) Organic cation/carnitine transporter 2 (Solut... 37 0.047
11RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1... 33 0.52
12ARGC_SULAC (Q4JAQ3) N-acetyl-gamma-glutamyl-phosphate/N-acetyl-g... 32 0.88
13CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 prec... 32 1.5
14STF_LAMBD (P03764) Side tail fiber protein 31 2.0
15OAT5_HUMAN (Q63ZE4) Solute carrier family 22 member 10 (Organic ... 31 2.0
16K0574_HUMAN (O60320) Protein KIAA0574 (Fragment) 31 2.6
17ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (I... 31 2.6
18SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-l... 30 4.4
19SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory eleme... 30 4.4
20STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoi... 30 5.7
21FACD2_MOUSE (Q80V62) Fanconi anemia group D2 protein homolog (Pr... 30 5.7
22MOVP_ACLSA (P54892) Putative movement protein (50.4 kDa protein)... 30 5.7
23S22A3_HUMAN (O75751) Organic cation transporter 3 (Extraneuronal... 30 5.7
24CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog 29 7.5
25SON_MOUSE (Q9QX47) SON protein 29 7.5
26CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37 29 7.5
27CN004_HUMAN (Q9H1B7) Protein C14orf4 29 7.5
28GA2L2_MOUSE (Q5SSG4) GAS2-like protein 2 (Growth arrest-specific... 29 9.7
29INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-) 29 9.7

>OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic anion|
           transporter 4)
          Length = 550

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
 Frame = +3

Query: 261 EPRWHCTGXXXXXXXXXXXXXXXXXGAWAWDRPAVTS-VISEWSLKCAGPALVSLPASSF 437
           +P+W                       W +DR   TS ++++W L C+   L  L  S F
Sbjct: 90  QPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIF 149

Query: 438 FAGCLAGGFLLTTLADSLLGRRKMLLVSIVSMSVA 542
            +G L G F+   L+    GR+ ML    + ++VA
Sbjct: 150 MSGILVGSFIWGLLS-YRFGRKPMLSWCCLQLAVA 183



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>S22A4_MOUSE (Q9Z306) Organic cation/carnitine transporter 1 (Solute carrier|
           family 22 member 4)
          Length = 553

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +3

Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518
           W +D+   ++++++EW+L C       L  S FF G L G F+   L+D   GR+K+L  
Sbjct: 117 WEYDKDIFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDR-FGRKKVLFA 175

Query: 519 SI 524
           ++
Sbjct: 176 TM 177



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>OAT6_MOUSE (Q80UJ1) Solute carrier family 22 member 20 (Organic anion|
           transporter 6)
          Length = 556

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 342 WAWDRPAVTS-VISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518
           W +DR    S ++ EW L C    L  L  S + +G L G  L   LAD  LGR+  L+ 
Sbjct: 111 WVYDRSIFPSTIVMEWDLVCEARTLRDLAQSIYMSGVLVGAALFGGLADR-LGRKAPLVW 169

Query: 519 SIVSMSVA 542
           S + ++V+
Sbjct: 170 SYLQLAVS 177



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>S22A9_HUMAN (Q8IVM8) Solute carrier family 22 member 9 (Organic anion|
           transporter 4)
          Length = 553

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +3

Query: 342 WAWDRPAVTS-VISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKML 512
           W +DR + +S +++EW L C   +L S+    F AG + GG L   L+D   GRR +L
Sbjct: 120 WVYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDR-FGRRFVL 176



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>S22A5_MOUSE (Q9Z0E8) Organic cation/carnitine transporter 2 (Solute carrier|
           family 22 member 5) (High-affinity sodium-dependent
           carnitine cotransporter)
          Length = 557

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +3

Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518
           W +D+   ++++++EW L C       L  S FF G L G F+   L+D   GR+ +L +
Sbjct: 117 WEYDKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDR-FGRKNVLFL 175

Query: 519 SI 524
           ++
Sbjct: 176 TM 177



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>S22A4_RAT (Q9R141) Organic cation/carnitine transporter 1 (Solute carrier|
           family 22 member 4)
          Length = 553

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +3

Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518
           W + +   ++++++EW+L C       L  S FF G L G F+   L+D   GR+K+L  
Sbjct: 117 WEYSKDVFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDR-FGRKKVLFA 175

Query: 519 SI 524
           ++
Sbjct: 176 TM 177



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>S22A4_HUMAN (Q9H015) Organic cation/carnitine transporter 1 (Solute carrier|
           family 22 member 4) (Ergothioneine transporter) (ET
           transporter)
          Length = 551

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +3

Query: 363 VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSI 524
           +++V++EW+L C     V L  S FF G L G F+   L+D   GR+ +L  ++
Sbjct: 125 LSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDR-FGRKNVLFATM 177



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>S22A5_HUMAN (O76082) Organic cation/carnitine transporter 2 (Solute carrier|
           family 22 member 5) (High-affinity sodium-dependent
           carnitine cotransporter)
          Length = 557

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +3

Query: 363 VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSI 524
           ++++++EW+L C       L  S FF G L G F+   L+D   GR+ +L V++
Sbjct: 125 LSTIVTEWNLVCEDDWKAPLTISLFFVGVLLGSFISGQLSDR-FGRKNVLFVTM 177



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>OCTN3_MOUSE (Q9WTN6) Organic cation/carnitine transporter 3 (Solute carrier|
           family 22 member 21) (Solute carrier family 22 member 9)
          Length = 564

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +3

Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518
           W +D+   ++++++EW L C       L  S F+ G L G F+   L+D   GR+ +L +
Sbjct: 117 WEYDKDIFLSTIVTEWDLVCKDDWKAPLTTSFFYVGVLLGSFISGQLSDR-FGRKNILFL 175

Query: 519 SI 524
           ++
Sbjct: 176 TM 177



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>S22A5_RAT (O70594) Organic cation/carnitine transporter 2 (Solute carrier|
           family 22 member 5) (High-affinity sodium-dependent
           carnitine cotransporter) (UST2r) (CT1)
          Length = 557

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +3

Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518
           W +++   ++++++EW L C       L  S FF G L G F+   L+D   GR+ +L +
Sbjct: 117 WEYNKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDR-FGRKNVLFL 175

Query: 519 SI 524
           ++
Sbjct: 176 TM 177



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>RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1 (EC 3.6.1.-)|
            (Helicase-like protein NHL)
          Length = 1400

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -2

Query: 499  RPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAH 320
            + +S+ +S +R++P     A  EDAG   S+GP H    SE               G  H
Sbjct: 1176 KTQSKISSFLRQRPAGTVGAGGEDAGPSQSSGPPHGPAASEW--------------GEPH 1221

Query: 319  GDAVAAEQDASAP 281
            G  +A +Q   AP
Sbjct: 1222 GRDIAGQQATGAP 1234



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>ARGC_SULAC (Q4JAQ3) N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-|
           aminoadipyl-phosphate reductase (EC 1.2.1.38) (EC
           1.2.1.-) (AGPR) (N-acetyl-glutamate
           semialdehyde/N-acetyl-aminoadipate semialdehyde
           dehydrogenase) (NAGSA dehydrogenase)
          Length = 350

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
 Frame = -2

Query: 394 LSDHSEITDVTAGRSHAHAP--DGSAHGDAVAAEQDASAPVQC--HRGSASVNTEMNTCC 227
           L ++  I+DV  G S   A   +GS H +     Q+A  P +   HR +A V  E+    
Sbjct: 168 LDNYRLISDVKVGSSEGGAKPSEGSHHPE----RQNAIRPYEAEGHRHAAEVEQELQYI- 222

Query: 226 ASKAHAKASNTALRSCRAPVAPMYVSMVSSIDGALAGLVLWLVRSGAAAV----SAIRTV 59
            SK   K S             +    VS+I GALA +  WL+      +      I   
Sbjct: 223 -SKKEVKIS-------------LVPHAVSTIRGALASVHGWLISDDLNEIEFWKKIIEFY 268

Query: 58  RGRAFVRL 35
           RGR FVR+
Sbjct: 269 RGRKFVRV 276



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>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner|
           cell wall protein)
          Length = 238

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = -2

Query: 436 NEDAGRETSAGPAHLSD-HSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAPVQCHRGS 260
           N DA    SA  +  S+ ++ + D ++  S + +    A     A+   AS+  +    S
Sbjct: 69  NNDADAAYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSS 128

Query: 259 ASVNTEMNTCCASKAHAKASNT 194
           AS +T+ ++  A+ + +KAS+T
Sbjct: 129 ASSSTKASSSSAAPSSSKASST 150



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>STF_LAMBD (P03764) Side tail fiber protein|
          Length = 774

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 6/178 (3%)
 Frame = -2

Query: 541 ATDMDTMDTSSIFLRPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVT 362
           A+      ++S      SE+A+  R    +++ AK+ +    +SAG A  S        T
Sbjct: 213 ASQQSAATSASTAATKASEAATSARDAVASKEAAKSSETNASSSAGRAASS-------AT 265

Query: 361 AGRSHAHAPDGS---AHGDAVAAEQDASAPVQCH---RGSASVNTEMNTCCASKAHAKAS 200
           A  + A A   S   A     AAE+ ASA         GSAS  +   T  A  A + + 
Sbjct: 266 AAENSARAAKTSETNARSSETAAERSASAAADAKTAAAGSASTASTKATEAAGSAVSASQ 325

Query: 199 NTALRSCRAPVAPMYVSMVSSIDGALAGLVLWLVRSGAAAVSAIRTVRGRAFVRLPLA 26
           + +     A  A         I  A+A       R G   +S+            P A
Sbjct: 326 SKSAAEAAAIRAKNSAKRAEDIASAVALEDADTTRKGIVQLSSATNSTSETLAATPKA 383



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>OAT5_HUMAN (Q63ZE4) Solute carrier family 22 member 10 (Organic anion|
           transporter 5)
          Length = 531

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/92 (21%), Positives = 34/92 (36%)
 Frame = +3

Query: 264 PRWHCTGXXXXXXXXXXXXXXXXXGAWAWDRPAVTSVISEWSLKCAGPALVSLPASSFFA 443
           P+W                       W +D+    S I  W L C   +L S+       
Sbjct: 94  PQWQLLHLNGTIHSTSEADTEPCVDGWVYDQSYFPSTIVTWDLVCDYQSLKSVVQFLLLT 153

Query: 444 GCLAGGFLLTTLADSLLGRRKMLLVSIVSMSV 539
           G L GG +   ++D   GRR +L   ++ +++
Sbjct: 154 GMLVGGIIGGHVSDR-FGRRFILRWCLLQLAI 184



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>K0574_HUMAN (O60320) Protein KIAA0574 (Fragment)|
          Length = 405

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 28/100 (28%), Positives = 40/100 (40%)
 Frame = -2

Query: 460 PPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAP 281
           PP R   ++   G +   GP H+S  +  +D T   S       S  GDA +        
Sbjct: 238 PPGRVSPEDPGMGSQVQPGPGHVSRST--SDPTLCTS-------SMAGDASS-------- 280

Query: 280 VQCHRGSASVNTEMNTCCASKAHAKASNTALRSCRAPVAP 161
              HR S S + E     A    A  S +A  +CRA ++P
Sbjct: 281 ---HRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSP 317



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>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 16/129 (12%)
 Frame = -2

Query: 499 RPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHL----SDHSEIT-----DVTAGRSH 347
           RPR+  A  VR  PP   P +    G E +A PA        HS +      + +  R+ 
Sbjct: 400 RPRAAVAPCVRAPPPGPGP-RAPAPGAEPAARPADARRVPQSHSSLAQAANQEQSLCRAR 458

Query: 346 AHAPDGS-------AHGDAVAAEQDASAPVQCHRGSASVNTEMNTCCASKAHAKASNTAL 188
           A    GS        HG +  A    +AP+     +ASV  E       +  +   N + 
Sbjct: 459 ATVARGSGGPGVEGGHGPSRGAAPSGAAPLP---SAASVEQEAAVRPRKRRGSGQENPSP 515

Query: 187 RSCRAPVAP 161
           +S R P+AP
Sbjct: 516 QSTRPPLAP 524



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>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3|
            (SPA-1-like protein 3)
          Length = 1781

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 463  KPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPD 332
            K P+RQ A  +D+    S G    S HS    +++  S +H+ D
Sbjct: 1242 KHPSRQDAAGKDSPNRHSKGEPQYSSHSSSNTLSSNASSSHSDD 1285



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>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding|
            protein) (NRE-binding protein) (DBP-5) (Bax antagonist
            selected in saccharomyces 1) (BASS1)
          Length = 2426

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +1

Query: 1    TQPVSSQDKLAANAQKRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRRT 159
            ++ V  +   + +  +R+R P      P  RS   +++ R   RRS TPSRR+
Sbjct: 1940 SRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRS 1992



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 16   SQDKLAANAQKRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRR 156
            S  + +    +R+R P      P  RS   +++ R   RRS TPSRR
Sbjct: 1952 SPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1998



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>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac|
          Length = 1120

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
 Frame = -2

Query: 490 SESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHGDA 311
           +++A   R    +   A +      +SAG A            A  S   A   SA G A
Sbjct: 146 ADAADSARAASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSA-GAA 204

Query: 310 VAAEQDASAPVQCHRGSAS-VNTEMNTCCASKAHAKASNTALRSCRAPVAPMYVSMVSSI 134
             +E +ASA +Q    SAS   T+ +    S   A AS  A +S     +    S  SS 
Sbjct: 205 KTSETNASASLQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSA 264

Query: 133 DGA 125
             A
Sbjct: 265 TAA 267



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>FACD2_MOUSE (Q80V62) Fanconi anemia group D2 protein homolog (Protein FACD2)|
          Length = 1450

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
 Frame = -2

Query: 541  ATDMDTMDTSSIFLRPRSESASVVRRKPPARQPAKNE--DAGRETSAGPAHLSDHSEITD 368
            + D+DT+D     + PRS SA   + +   +   K +  D+ + + +      D SE   
Sbjct: 839  SVDLDTLD-----MMPRSSSAVAAKNRNKGKTGGKKQKADSNKASCSDTLLTEDTSECDM 893

Query: 367  VTAGRSHAHAPDGSAHGDAVAAEQDASA 284
              +GRSH         G    + Q+  A
Sbjct: 894  APSGRSHVDKESTGKEGKTFVSLQNYRA 921



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>MOVP_ACLSA (P54892) Putative movement protein (50.4 kDa protein) (ORF2)|
          Length = 457

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = -2

Query: 493 RSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHG 317
           RSES    RR+ P+ +   N  +G +T     HL +HS+  D+   R    A  G  HG
Sbjct: 366 RSESVPGRRRQTPSWKDRGN--SGTDTGG---HLREHSDTGDLGTNRVPGRAGGGEIHG 419



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>S22A3_HUMAN (O75751) Organic cation transporter 3 (Extraneuronal monoamine|
           transporter) (EMT) (Solute carrier family 22 member 3)
          Length = 556

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +3

Query: 336 GAWAWDRPAVTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLL 515
           G W + + A ++++SE+ L C    ++ L  +    G L G F L   AD   GR  + L
Sbjct: 129 GGWRYAQ-AHSTIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADR-YGRIVIYL 186

Query: 516 VSIVSMSV 539
           +S + + V
Sbjct: 187 LSCLGVGV 194



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>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog|
          Length = 775

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
 Frame = -2

Query: 460 PPARQPAKNEDAGRETSA--GPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDAS 287
           PP   P  N     E++   GP+ ++    + D T G +H+     S H    +A +++S
Sbjct: 579 PPPLGPHSNRTTPPESAPQNGPSPMAALMSVAD-TLGTAHSPKDGSSVHSTTASARRNSS 637

Query: 286 APVQ-----CHRGSASVNTEMN 236
           +PV        R  AS N ++N
Sbjct: 638 SPVSPASVPGQRRLASRNGDLN 659



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>SON_MOUSE (Q9QX47) SON protein|
          Length = 2404

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 10   VSSQDKLAANAQKRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRR 156
            V  +   + +  +R+R P      P  RS   +++ R   RRS TPSRR
Sbjct: 1928 VGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1976



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>CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37|
          Length = 611

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 484 SASVVRRKPPARQPAKNEDAGRETSAGPAHLS 389
           S+S    + P +Q  KNE+ G + SA P HLS
Sbjct: 26  SSSSSTEENPKKQARKNEEHGPDPSANPFHLS 57



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>CN004_HUMAN (Q9H1B7) Protein C14orf4|
          Length = 796

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
 Frame = -2

Query: 460 PPARQPAKNEDAGRETSA--GPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDAS 287
           PP   P  N     E++   GP+ ++    + D T G +H+     S H    +A +++S
Sbjct: 600 PPPLGPHSNRTTPPESAPQNGPSPMAALMSVAD-TLGTAHSPKDGSSVHSTTASARRNSS 658

Query: 286 APVQ-----CHRGSASVNTEMN 236
           +PV        R  AS N ++N
Sbjct: 659 SPVSPASVPGQRRLASRNGDLN 680



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>GA2L2_MOUSE (Q5SSG4) GAS2-like protein 2 (Growth arrest-specific 2-like 2)|
          Length = 860

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 18/187 (9%)
 Frame = -2

Query: 535 DMDTMDTSSIFLRPRSESASVVRRKPPARQPAKNED-----------AGRETSAGPAHLS 389
           D  T  +SS  LRP + S+  +R +PP R     ED           + R +S GP   S
Sbjct: 322 DWKTYTSSSRKLRPPTPSSPGLRSEPPVRARTLREDPLPRSQEKPTPSQRMSSPGPQFSS 381

Query: 388 D--HSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAPVQCHRGSASVNTEMNTCCASKA 215
                ++    +G+     P     G         +  +  H+ + S  T        + 
Sbjct: 382 TCRGPDLQSTLSGKRANRCPGEPPRG--------RTPTLWVHKEAGSRGTHTKAPTPQRL 433

Query: 214 HAKASNTALRSCRAPVAPMYVSMVSSIDGALAGLVLWLVRSGAA-AVSAIRTVR----GR 50
               + +   S R P  P   S ++S        ++W++  GA+  +S   TV     G+
Sbjct: 434 QIPEATSKRTSARGPSPPPRSSSLASPH------MIWVLHQGASPQLSEPMTVHSSSPGK 487

Query: 49  AFVRLPL 29
              ++P+
Sbjct: 488 GLTKIPI 494



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>INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1387

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -2

Query: 469 RRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPD 332
           RR+ PA   +  +D+ +  +A      DHS     TA  + +  PD
Sbjct: 253 RRRKPAATTSTTDDSNKAVAAAANGTKDHSATAGTTASANGSDTPD 298


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,579,418
Number of Sequences: 219361
Number of extensions: 898735
Number of successful extensions: 3976
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3966
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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