Clone Name | bart10h10 |
---|---|
Clone Library Name | barley_pub |
>OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic anion| transporter 4) Length = 550 Score = 42.4 bits (98), Expect = 9e-04 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%) Frame = +3 Query: 261 EPRWHCTGXXXXXXXXXXXXXXXXXGAWAWDRPAVTS-VISEWSLKCAGPALVSLPASSF 437 +P+W W +DR TS ++++W L C+ L L S F Sbjct: 90 QPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIF 149 Query: 438 FAGCLAGGFLLTTLADSLLGRRKMLLVSIVSMSVA 542 +G L G F+ L+ GR+ ML + ++VA Sbjct: 150 MSGILVGSFIWGLLS-YRFGRKPMLSWCCLQLAVA 183
>S22A4_MOUSE (Q9Z306) Organic cation/carnitine transporter 1 (Solute carrier| family 22 member 4) Length = 553 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +3 Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518 W +D+ ++++++EW+L C L S FF G L G F+ L+D GR+K+L Sbjct: 117 WEYDKDIFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDR-FGRKKVLFA 175 Query: 519 SI 524 ++ Sbjct: 176 TM 177
>OAT6_MOUSE (Q80UJ1) Solute carrier family 22 member 20 (Organic anion| transporter 6) Length = 556 Score = 40.0 bits (92), Expect = 0.004 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +3 Query: 342 WAWDRPAVTS-VISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518 W +DR S ++ EW L C L L S + +G L G L LAD LGR+ L+ Sbjct: 111 WVYDRSIFPSTIVMEWDLVCEARTLRDLAQSIYMSGVLVGAALFGGLADR-LGRKAPLVW 169 Query: 519 SIVSMSVA 542 S + ++V+ Sbjct: 170 SYLQLAVS 177
>S22A9_HUMAN (Q8IVM8) Solute carrier family 22 member 9 (Organic anion| transporter 4) Length = 553 Score = 39.3 bits (90), Expect = 0.007 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +3 Query: 342 WAWDRPAVTS-VISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKML 512 W +DR + +S +++EW L C +L S+ F AG + GG L L+D GRR +L Sbjct: 120 WVYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDR-FGRRFVL 176
>S22A5_MOUSE (Q9Z0E8) Organic cation/carnitine transporter 2 (Solute carrier| family 22 member 5) (High-affinity sodium-dependent carnitine cotransporter) Length = 557 Score = 38.5 bits (88), Expect = 0.012 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +3 Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518 W +D+ ++++++EW L C L S FF G L G F+ L+D GR+ +L + Sbjct: 117 WEYDKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDR-FGRKNVLFL 175 Query: 519 SI 524 ++ Sbjct: 176 TM 177
>S22A4_RAT (Q9R141) Organic cation/carnitine transporter 1 (Solute carrier| family 22 member 4) Length = 553 Score = 38.1 bits (87), Expect = 0.016 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +3 Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518 W + + ++++++EW+L C L S FF G L G F+ L+D GR+K+L Sbjct: 117 WEYSKDVFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDR-FGRKKVLFA 175 Query: 519 SI 524 ++ Sbjct: 176 TM 177
>S22A4_HUMAN (Q9H015) Organic cation/carnitine transporter 1 (Solute carrier| family 22 member 4) (Ergothioneine transporter) (ET transporter) Length = 551 Score = 37.0 bits (84), Expect = 0.036 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +3 Query: 363 VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSI 524 +++V++EW+L C V L S FF G L G F+ L+D GR+ +L ++ Sbjct: 125 LSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDR-FGRKNVLFATM 177
>S22A5_HUMAN (O76082) Organic cation/carnitine transporter 2 (Solute carrier| family 22 member 5) (High-affinity sodium-dependent carnitine cotransporter) Length = 557 Score = 37.0 bits (84), Expect = 0.036 Identities = 18/54 (33%), Positives = 31/54 (57%) Frame = +3 Query: 363 VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSI 524 ++++++EW+L C L S FF G L G F+ L+D GR+ +L V++ Sbjct: 125 LSTIVTEWNLVCEDDWKAPLTISLFFVGVLLGSFISGQLSDR-FGRKNVLFVTM 177
>OCTN3_MOUSE (Q9WTN6) Organic cation/carnitine transporter 3 (Solute carrier| family 22 member 21) (Solute carrier family 22 member 9) Length = 564 Score = 37.0 bits (84), Expect = 0.036 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +3 Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518 W +D+ ++++++EW L C L S F+ G L G F+ L+D GR+ +L + Sbjct: 117 WEYDKDIFLSTIVTEWDLVCKDDWKAPLTTSFFYVGVLLGSFISGQLSDR-FGRKNILFL 175 Query: 519 SI 524 ++ Sbjct: 176 TM 177
>S22A5_RAT (O70594) Organic cation/carnitine transporter 2 (Solute carrier| family 22 member 5) (High-affinity sodium-dependent carnitine cotransporter) (UST2r) (CT1) Length = 557 Score = 36.6 bits (83), Expect = 0.047 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +3 Query: 342 WAWDRPA-VTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLV 518 W +++ ++++++EW L C L S FF G L G F+ L+D GR+ +L + Sbjct: 117 WEYNKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDR-FGRKNVLFL 175 Query: 519 SI 524 ++ Sbjct: 176 TM 177
>RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1 (EC 3.6.1.-)| (Helicase-like protein NHL) Length = 1400 Score = 33.1 bits (74), Expect = 0.52 Identities = 22/73 (30%), Positives = 32/73 (43%) Frame = -2 Query: 499 RPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAH 320 + +S+ +S +R++P A EDAG S+GP H SE G H Sbjct: 1176 KTQSKISSFLRQRPAGTVGAGGEDAGPSQSSGPPHGPAASEW--------------GEPH 1221 Query: 319 GDAVAAEQDASAP 281 G +A +Q AP Sbjct: 1222 GRDIAGQQATGAP 1234
>ARGC_SULAC (Q4JAQ3) N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-| aminoadipyl-phosphate reductase (EC 1.2.1.38) (EC 1.2.1.-) (AGPR) (N-acetyl-glutamate semialdehyde/N-acetyl-aminoadipate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 350 Score = 32.3 bits (72), Expect = 0.88 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 8/128 (6%) Frame = -2 Query: 394 LSDHSEITDVTAGRSHAHAP--DGSAHGDAVAAEQDASAPVQC--HRGSASVNTEMNTCC 227 L ++ I+DV G S A +GS H + Q+A P + HR +A V E+ Sbjct: 168 LDNYRLISDVKVGSSEGGAKPSEGSHHPE----RQNAIRPYEAEGHRHAAEVEQELQYI- 222 Query: 226 ASKAHAKASNTALRSCRAPVAPMYVSMVSSIDGALAGLVLWLVRSGAAAV----SAIRTV 59 SK K S + VS+I GALA + WL+ + I Sbjct: 223 -SKKEVKIS-------------LVPHAVSTIRGALASVHGWLISDDLNEIEFWKKIIEFY 268 Query: 58 RGRAFVRL 35 RGR FVR+ Sbjct: 269 RGRKFVRV 276
>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner| cell wall protein) Length = 238 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = -2 Query: 436 NEDAGRETSAGPAHLSD-HSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAPVQCHRGS 260 N DA SA + S+ ++ + D ++ S + + A A+ AS+ + S Sbjct: 69 NNDADAAYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSS 128 Query: 259 ASVNTEMNTCCASKAHAKASNT 194 AS +T+ ++ A+ + +KAS+T Sbjct: 129 ASSSTKASSSSAAPSSSKASST 150
>STF_LAMBD (P03764) Side tail fiber protein| Length = 774 Score = 31.2 bits (69), Expect = 2.0 Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 6/178 (3%) Frame = -2 Query: 541 ATDMDTMDTSSIFLRPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVT 362 A+ ++S SE+A+ R +++ AK+ + +SAG A S T Sbjct: 213 ASQQSAATSASTAATKASEAATSARDAVASKEAAKSSETNASSSAGRAASS-------AT 265 Query: 361 AGRSHAHAPDGS---AHGDAVAAEQDASAPVQCH---RGSASVNTEMNTCCASKAHAKAS 200 A + A A S A AAE+ ASA GSAS + T A A + + Sbjct: 266 AAENSARAAKTSETNARSSETAAERSASAAADAKTAAAGSASTASTKATEAAGSAVSASQ 325 Query: 199 NTALRSCRAPVAPMYVSMVSSIDGALAGLVLWLVRSGAAAVSAIRTVRGRAFVRLPLA 26 + + A A I A+A R G +S+ P A Sbjct: 326 SKSAAEAAAIRAKNSAKRAEDIASAVALEDADTTRKGIVQLSSATNSTSETLAATPKA 383
>OAT5_HUMAN (Q63ZE4) Solute carrier family 22 member 10 (Organic anion| transporter 5) Length = 531 Score = 31.2 bits (69), Expect = 2.0 Identities = 20/92 (21%), Positives = 34/92 (36%) Frame = +3 Query: 264 PRWHCTGXXXXXXXXXXXXXXXXXGAWAWDRPAVTSVISEWSLKCAGPALVSLPASSFFA 443 P+W W +D+ S I W L C +L S+ Sbjct: 94 PQWQLLHLNGTIHSTSEADTEPCVDGWVYDQSYFPSTIVTWDLVCDYQSLKSVVQFLLLT 153 Query: 444 GCLAGGFLLTTLADSLLGRRKMLLVSIVSMSV 539 G L GG + ++D GRR +L ++ +++ Sbjct: 154 GMLVGGIIGGHVSDR-FGRRFILRWCLLQLAI 184
>K0574_HUMAN (O60320) Protein KIAA0574 (Fragment)| Length = 405 Score = 30.8 bits (68), Expect = 2.6 Identities = 28/100 (28%), Positives = 40/100 (40%) Frame = -2 Query: 460 PPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAP 281 PP R ++ G + GP H+S + +D T S S GDA + Sbjct: 238 PPGRVSPEDPGMGSQVQPGPGHVSRST--SDPTLCTS-------SMAGDASS-------- 280 Query: 280 VQCHRGSASVNTEMNTCCASKAHAKASNTALRSCRAPVAP 161 HR S S + E A A S +A +CRA ++P Sbjct: 281 ---HRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSP 317
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 30.8 bits (68), Expect = 2.6 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 16/129 (12%) Frame = -2 Query: 499 RPRSESASVVRRKPPARQPAKNEDAGRETSAGPAHL----SDHSEIT-----DVTAGRSH 347 RPR+ A VR PP P + G E +A PA HS + + + R+ Sbjct: 400 RPRAAVAPCVRAPPPGPGP-RAPAPGAEPAARPADARRVPQSHSSLAQAANQEQSLCRAR 458 Query: 346 AHAPDGS-------AHGDAVAAEQDASAPVQCHRGSASVNTEMNTCCASKAHAKASNTAL 188 A GS HG + A +AP+ +ASV E + + N + Sbjct: 459 ATVARGSGGPGVEGGHGPSRGAAPSGAAPLP---SAASVEQEAAVRPRKRRGSGQENPSP 515 Query: 187 RSCRAPVAP 161 +S R P+AP Sbjct: 516 QSTRPPLAP 524
>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3| (SPA-1-like protein 3) Length = 1781 Score = 30.0 bits (66), Expect = 4.4 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -2 Query: 463 KPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPD 332 K P+RQ A +D+ S G S HS +++ S +H+ D Sbjct: 1242 KHPSRQDAAGKDSPNRHSKGEPQYSSHSSSNTLSSNASSSHSDD 1285
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 30.0 bits (66), Expect = 4.4 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +1 Query: 1 TQPVSSQDKLAANAQKRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRRT 159 ++ V + + + +R+R P P RS +++ R RRS TPSRR+ Sbjct: 1940 SRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRS 1992 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +1 Query: 16 SQDKLAANAQKRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRR 156 S + + +R+R P P RS +++ R RRS TPSRR Sbjct: 1952 SPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1998
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac| Length = 1120 Score = 29.6 bits (65), Expect = 5.7 Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 1/123 (0%) Frame = -2 Query: 490 SESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHGDA 311 +++A R + A + +SAG A A S A SA G A Sbjct: 146 ADAADSARAASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSA-GAA 204 Query: 310 VAAEQDASAPVQCHRGSAS-VNTEMNTCCASKAHAKASNTALRSCRAPVAPMYVSMVSSI 134 +E +ASA +Q SAS T+ + S A AS A +S + S SS Sbjct: 205 KTSETNASASLQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSA 264 Query: 133 DGA 125 A Sbjct: 265 TAA 267
>FACD2_MOUSE (Q80V62) Fanconi anemia group D2 protein homolog (Protein FACD2)| Length = 1450 Score = 29.6 bits (65), Expect = 5.7 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Frame = -2 Query: 541 ATDMDTMDTSSIFLRPRSESASVVRRKPPARQPAKNE--DAGRETSAGPAHLSDHSEITD 368 + D+DT+D + PRS SA + + + K + D+ + + + D SE Sbjct: 839 SVDLDTLD-----MMPRSSSAVAAKNRNKGKTGGKKQKADSNKASCSDTLLTEDTSECDM 893 Query: 367 VTAGRSHAHAPDGSAHGDAVAAEQDASA 284 +GRSH G + Q+ A Sbjct: 894 APSGRSHVDKESTGKEGKTFVSLQNYRA 921
>MOVP_ACLSA (P54892) Putative movement protein (50.4 kDa protein) (ORF2)| Length = 457 Score = 29.6 bits (65), Expect = 5.7 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -2 Query: 493 RSESASVVRRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPDGSAHG 317 RSES RR+ P+ + N +G +T HL +HS+ D+ R A G HG Sbjct: 366 RSESVPGRRRQTPSWKDRGN--SGTDTGG---HLREHSDTGDLGTNRVPGRAGGGEIHG 419
>S22A3_HUMAN (O75751) Organic cation transporter 3 (Extraneuronal monoamine| transporter) (EMT) (Solute carrier family 22 member 3) Length = 556 Score = 29.6 bits (65), Expect = 5.7 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +3 Query: 336 GAWAWDRPAVTSVISEWSLKCAGPALVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLL 515 G W + + A ++++SE+ L C ++ L + G L G F L AD GR + L Sbjct: 129 GGWRYAQ-AHSTIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADR-YGRIVIYL 186 Query: 516 VSIVSMSV 539 +S + + V Sbjct: 187 LSCLGVGV 194
>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog| Length = 775 Score = 29.3 bits (64), Expect = 7.5 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Frame = -2 Query: 460 PPARQPAKNEDAGRETSA--GPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDAS 287 PP P N E++ GP+ ++ + D T G +H+ S H +A +++S Sbjct: 579 PPPLGPHSNRTTPPESAPQNGPSPMAALMSVAD-TLGTAHSPKDGSSVHSTTASARRNSS 637 Query: 286 APVQ-----CHRGSASVNTEMN 236 +PV R AS N ++N Sbjct: 638 SPVSPASVPGQRRLASRNGDLN 659
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 10 VSSQDKLAANAQKRAREPCEWLTRPPPRS*QATKQGRPRHRRSMTPSRR 156 V + + + +R+R P P RS +++ R RRS TPSRR Sbjct: 1928 VGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1976
>CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37| Length = 611 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 Query: 484 SASVVRRKPPARQPAKNEDAGRETSAGPAHLS 389 S+S + P +Q KNE+ G + SA P HLS Sbjct: 26 SSSSSTEENPKKQARKNEEHGPDPSANPFHLS 57
>CN004_HUMAN (Q9H1B7) Protein C14orf4| Length = 796 Score = 29.3 bits (64), Expect = 7.5 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Frame = -2 Query: 460 PPARQPAKNEDAGRETSA--GPAHLSDHSEITDVTAGRSHAHAPDGSAHGDAVAAEQDAS 287 PP P N E++ GP+ ++ + D T G +H+ S H +A +++S Sbjct: 600 PPPLGPHSNRTTPPESAPQNGPSPMAALMSVAD-TLGTAHSPKDGSSVHSTTASARRNSS 658 Query: 286 APVQ-----CHRGSASVNTEMN 236 +PV R AS N ++N Sbjct: 659 SPVSPASVPGQRRLASRNGDLN 680
>GA2L2_MOUSE (Q5SSG4) GAS2-like protein 2 (Growth arrest-specific 2-like 2)| Length = 860 Score = 28.9 bits (63), Expect = 9.7 Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 18/187 (9%) Frame = -2 Query: 535 DMDTMDTSSIFLRPRSESASVVRRKPPARQPAKNED-----------AGRETSAGPAHLS 389 D T +SS LRP + S+ +R +PP R ED + R +S GP S Sbjct: 322 DWKTYTSSSRKLRPPTPSSPGLRSEPPVRARTLREDPLPRSQEKPTPSQRMSSPGPQFSS 381 Query: 388 D--HSEITDVTAGRSHAHAPDGSAHGDAVAAEQDASAPVQCHRGSASVNTEMNTCCASKA 215 ++ +G+ P G + + H+ + S T + Sbjct: 382 TCRGPDLQSTLSGKRANRCPGEPPRG--------RTPTLWVHKEAGSRGTHTKAPTPQRL 433 Query: 214 HAKASNTALRSCRAPVAPMYVSMVSSIDGALAGLVLWLVRSGAA-AVSAIRTVR----GR 50 + + S R P P S ++S ++W++ GA+ +S TV G+ Sbjct: 434 QIPEATSKRTSARGPSPPPRSSSLASPH------MIWVLHQGASPQLSEPMTVHSSSPGK 487 Query: 49 AFVRLPL 29 ++P+ Sbjct: 488 GLTKIPI 494
>INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1387 Score = 28.9 bits (63), Expect = 9.7 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = -2 Query: 469 RRKPPARQPAKNEDAGRETSAGPAHLSDHSEITDVTAGRSHAHAPD 332 RR+ PA + +D+ + +A DHS TA + + PD Sbjct: 253 RRRKPAATTSTTDDSNKAVAAAANGTKDHSATAGTTASANGSDTPD 298 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,579,418 Number of Sequences: 219361 Number of extensions: 898735 Number of successful extensions: 3976 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3966 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)