ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart10g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186423.2| Oryza sativa (japonica cultivar-group), mRNA 153 7e-34
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
3dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
4dbj|AK110810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 7e-34
5ref|NM_184424.2| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
7dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
8dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
9dbj|AK073659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
10dbj|AK060305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
11ref|XM_482929.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
12ref|XM_507269.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 5e-04
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
14dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
15dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
16dbj|AK073975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
17dbj|AK060706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
18ref|NM_186422.2| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
19ref|XM_506174.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.002
20dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
21dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
22dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
23ref|NM_186421.2| Oryza sativa (japonica cultivar-group), mRNA 48 0.028
24ref|XM_507352.1| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.028
25ref|XM_506173.2| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.028
26dbj|AK106142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
27dbj|AK106008.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
28dbj|AK061530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
29ref|NM_192768.1| Oryza sativa (japonica cultivar-group), predic... 44 0.43
30gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome... 44 0.43
31gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bi... 44 0.43
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
33dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
34dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
35dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
36dbj|AK073439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
37dbj|AK073204.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
38gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.7
39ref|XM_463670.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
40gb|BT017391.1| Zea mays clone EL01N0327F05.c mRNA sequence 42 1.7
41gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mR... 42 1.7
42gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.7
43dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
44gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the... 42 1.7
45dbj|AK109471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
46gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.7
47dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
48gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
49gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
50gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.8
51gb|DQ150097.1| Triticum aestivum pyridoxine biosynthesis protein... 40 6.8
52gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosom... 40 6.8
53emb|AL606519.6| Human DNA sequence from clone RP11-339D23 on chr... 40 6.8
54emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chr... 40 6.8
55gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, com... 40 6.8
56emb|CR378679.1| Photobacterium profundum SS9 chromosome 2; segme... 40 6.8
57dbj|AB242144.1| Argiope bruennichi CySp1 mRNA for egg case silk ... 40 6.8
58gb|AF213908.1| Influenza A virus (A/Swine/Italy/25823/94(H3N2)) ... 40 6.8
59gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.8
60ref|NM_064210.2| Caenorhabditis elegans C50E10.1 (C50E10.1) mRNA... 40 6.8
61dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
62dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
63dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
64gb|AC154904.4| Mus musculus BAC clone RP23-416C3 from chromosome... 40 6.8
65gb|AF157014.1|AF157014 Mus musculus Pax-5 protein gene, partial cds 40 6.8
66dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.8
67dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
68dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
69dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
70dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
71gb|AF098988.4| Caenorhabditis elegans cosmid C50E10, complete se... 40 6.8
72dbj|AK063409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
73dbj|AP000873.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.8
74gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.8
75gb|AC139149.6| Homo sapiens chromosome 17, clone RP13-766D20, co... 40 6.8
76gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
77emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chr... 40 6.8
78emb|CT005238.2| Methylocapsa acidiphila B2, overlapping BAC clon... 40 6.8
79emb|AJ342831.1|HSA342831 Homo sapiens genomic sequence surroundi... 40 6.8 
>ref|NM_186423.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1365

 Score =  153 bits (77), Expect = 7e-34
 Identities = 122/137 (89%)
 Strand = Plus / Plus

                                                                       
Query: 365 ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 424
           ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| ||||
Sbjct: 329 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 388

                                                                       
Query: 425 gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 484
           |||  ||| |||||  |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 389 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 448

                            
Query: 485 ccgccggctaccgcctc 501
           ||||||| |||||||||
Sbjct: 449 ccgccgggtaccgcctc 465



 Score =  115 bits (58), Expect = 1e-22
 Identities = 150/180 (83%), Gaps = 3/180 (1%)
 Strand = Plus / Plus

                                                                       
Query: 163 aacgtcgtggaggacctctacggcatcctccgtgtactcagcgacggcaccgttgtccgg 222
           |||||||| |||||||||  |||| ||||||| || ||||||||||||||| |  |||||
Sbjct: 118 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 177

                                                                       
Query: 223 tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 282
           || ||||    ||| | |||||||||   ||||||||||  ||| ||||| |||||| | 
Sbjct: 178 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 234

                                                                       
Query: 283 tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 342
           |||||||||||||||||||| |||  |||||||||||  |||||||||||||||||||||
Sbjct: 235 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 294



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 118 aacatgccaaccatgccggtcgccgtggctgcctccggcg 157
           ||||||||||||||||||| || |||| | ||| ||||||
Sbjct: 61  aacatgccaaccatgccggccgtcgtgtccgccgccggcg 100
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  153 bits (77), Expect = 7e-34
 Identities = 122/137 (89%)
 Strand = Plus / Minus

                                                                           
Query: 365     ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 424
               ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| ||||
Sbjct: 3384496 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 3384437

                                                                           
Query: 425     gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 484
               |||  ||| |||||  |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 3384436 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 3384377

                                
Query: 485     ccgccggctaccgcctc 501
               ||||||| |||||||||
Sbjct: 3384376 ccgccgggtaccgcctc 3384360



 Score =  115 bits (58), Expect = 1e-22
 Identities = 150/180 (83%), Gaps = 3/180 (1%)
 Strand = Plus / Minus

                                                                           
Query: 163     aacgtcgtggaggacctctacggcatcctccgtgtactcagcgacggcaccgttgtccgg 222
               |||||||| |||||||||  |||| ||||||| || ||||||||||||||| |  |||||
Sbjct: 3384707 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 3384648

                                                                           
Query: 223     tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 282
               || ||||    ||| | |||||||||   ||||||||||  ||| ||||| |||||| | 
Sbjct: 3384647 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 3384591

                                                                           
Query: 283     tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 342
               |||||||||||||||||||| |||  |||||||||||  |||||||||||||||||||||
Sbjct: 3384590 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 3384531



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 472     gccgtcgtgctctccgccggctaccgcctc 501
               ||||||||||||||||||| ||||||||||
Sbjct: 3378334 gccgtcgtgctctccgccgactaccgcctc 3378305



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                           
Query: 365     ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 408
               ||||||| |||||||||||| ||| ||| ||||| |||||||||
Sbjct: 3378441 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 3378398



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 462     ggaggccggcgccgtcgtgctctccg 487
               |||||||||||||||||||| |||||
Sbjct: 1867555 ggaggccggcgccgtcgtgcactccg 1867530



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 118     aacatgccaaccatgccggtcgccgtggctgcctccggcg 157
               ||||||||||||||||||| || |||| | ||| ||||||
Sbjct: 3384764 aacatgccaaccatgccggccgtcgtgtccgccgccggcg 3384725
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>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score =  153 bits (77), Expect = 7e-34
 Identities = 122/137 (89%)
 Strand = Plus / Minus

                                                                         
Query: 365   ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 424
             ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| ||||
Sbjct: 24316 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 24257

                                                                         
Query: 425   gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 484
             |||  ||| |||||  |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 24256 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 24197

                              
Query: 485   ccgccggctaccgcctc 501
             ||||||| |||||||||
Sbjct: 24196 ccgccgggtaccgcctc 24180



 Score =  115 bits (58), Expect = 1e-22
 Identities = 150/180 (83%), Gaps = 3/180 (1%)
 Strand = Plus / Minus

                                                                         
Query: 163   aacgtcgtggaggacctctacggcatcctccgtgtactcagcgacggcaccgttgtccgg 222
             |||||||| |||||||||  |||| ||||||| || ||||||||||||||| |  |||||
Sbjct: 24527 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 24468

                                                                         
Query: 223   tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 282
             || ||||    ||| | |||||||||   ||||||||||  ||| ||||| |||||| | 
Sbjct: 24467 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 24411

                                                                         
Query: 283   tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 342
             |||||||||||||||||||| |||  |||||||||||  |||||||||||||||||||||
Sbjct: 24410 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 24351



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 472   gccgtcgtgctctccgccggctaccgcctc 501
             ||||||||||||||||||| ||||||||||
Sbjct: 18154 gccgtcgtgctctccgccgactaccgcctc 18125



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 365   ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 408
             ||||||| |||||||||||| ||| ||| ||||| |||||||||
Sbjct: 18261 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 18218



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 118   aacatgccaaccatgccggtcgccgtggctgcctccggcg 157
             ||||||||||||||||||| || |||| | ||| ||||||
Sbjct: 24584 aacatgccaaccatgccggccgtcgtgtccgccgccggcg 24545
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>dbj|AK110810.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F04, full
           insert sequence
          Length = 1366

 Score =  153 bits (77), Expect = 7e-34
 Identities = 122/137 (89%)
 Strand = Plus / Plus

                                                                       
Query: 365 ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 424
           ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| ||||
Sbjct: 329 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 388

                                                                       
Query: 425 gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 484
           |||  ||| |||||  |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 389 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 448

                            
Query: 485 ccgccggctaccgcctc 501
           ||||||| |||||||||
Sbjct: 449 ccgccgggtaccgcctc 465



 Score =  115 bits (58), Expect = 1e-22
 Identities = 150/180 (83%), Gaps = 3/180 (1%)
 Strand = Plus / Plus

                                                                       
Query: 163 aacgtcgtggaggacctctacggcatcctccgtgtactcagcgacggcaccgttgtccgg 222
           |||||||| |||||||||  |||| ||||||| || ||||||||||||||| |  |||||
Sbjct: 118 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 177

                                                                       
Query: 223 tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 282
           || ||||    ||| | |||||||||   ||||||||||  ||| ||||| |||||| | 
Sbjct: 178 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 234

                                                                       
Query: 283 tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 342
           |||||||||||||||||||| |||  |||||||||||  |||||||||||||||||||||
Sbjct: 235 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 294



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 118 aacatgccaaccatgccggtcgccgtggctgcctccggcg 157
           ||||||||||||||||||| || |||| | ||| ||||||
Sbjct: 61  aacatgccaaccatgccggccgtcgtgtccgccgccggcg 100
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>ref|NM_184424.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1232

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 470 gcgccgtcgtgctctccgccggctaccgcctc 501
           ||||||||||||||||||||| ||||||||||
Sbjct: 370 gcgccgtcgtgctctccgccgactaccgcctc 401



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 369 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 413
           ||||||||||||||||  || ||| ||||| |||| |||||||||
Sbjct: 269 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 313
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 470     gcgccgtcgtgctctccgccggctaccgcctc 501
               ||||||||||||||||||||| ||||||||||
Sbjct: 2957072 gcgccgtcgtgctctccgccgactaccgcctc 2957041



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 474      cgtcgtgctctccgccggctac 495
                ||||||||||||||||||||||
Sbjct: 24331489 cgtcgtgctctccgccggctac 24331510



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 470      gcgccgtcgtgctctccgccg 490
                |||||||||||||||||||||
Sbjct: 40556153 gcgccgtcgtgctctccgccg 40556173



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                            
Query: 369     gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 413
               ||||||||||||||||  || ||| ||||| |||| |||||||||
Sbjct: 2957173 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 2957129
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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0011G08
          Length = 139490

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 470   gcgccgtcgtgctctccgccggctaccgcctc 501
             ||||||||||||||||||||| ||||||||||
Sbjct: 38589 gcgccgtcgtgctctccgccgactaccgcctc 38558



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 369   gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 413
             ||||||||||||||||  || ||| ||||| |||| |||||||||
Sbjct: 38690 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 38646
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>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0030H07
          Length = 168253

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 470    gcgccgtcgtgctctccgccggctaccgcctc 501
              ||||||||||||||||||||| ||||||||||
Sbjct: 164070 gcgccgtcgtgctctccgccgactaccgcctc 164039



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 369    gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 413
              ||||||||||||||||  || ||| ||||| |||| |||||||||
Sbjct: 164171 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 164127
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>dbj|AK073659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033053C20, full
           insert sequence
          Length = 1231

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 470 gcgccgtcgtgctctccgccggctaccgcctc 501
           ||||||||||||||||||||| ||||||||||
Sbjct: 369 gcgccgtcgtgctctccgccgactaccgcctc 400



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 369 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 413
           ||||||||||||||||  || ||| ||||| |||| |||||||||
Sbjct: 268 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 312
to top
>dbj|AK060305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A09, full
           insert sequence
          Length = 1274

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 470 gcgccgtcgtgctctccgccggctaccgcctc 501
           ||||||||||||||||||||| ||||||||||
Sbjct: 368 gcgccgtcgtgctctccgccgactaccgcctc 399



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 369 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 413
           ||||||||||||||||  || ||| ||||| |||| |||||||||
Sbjct: 267 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 311
to top
>ref|XM_482929.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1377

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 367 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 417
           ||||| || ||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 320 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 370
to top
>ref|XM_507269.1| PREDICTED Oryza sativa (japonica cultivar-group), P0451G12.24 mRNA
          Length = 1426

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 367 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 417
           ||||| || ||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 322 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 372
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 367      aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 417
                ||||| || ||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 23411819 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 23411869
to top
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 367   aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 417
             ||||| || ||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 93656 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 93706
to top
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1111_E05
          Length = 126978

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 367  aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 417
            ||||| || ||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 3234 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 3284
to top
>dbj|AK073975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072F03, full
           insert sequence
          Length = 1377

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 367 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 417
           ||||| || ||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 320 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 370
to top
>dbj|AK060706.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H02, full
           insert sequence
          Length = 1426

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 367 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 417
           ||||| || ||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 322 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 372
to top
>ref|NM_186422.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1189

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 472 gccgtcgtgctctccgccggctaccgcctc 501
           ||||||||||||||||||| ||||||||||
Sbjct: 370 gccgtcgtgctctccgccgactaccgcctc 399



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 365 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 408
           ||||||| |||||||||||| ||| ||| ||||| |||||||||
Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
to top
>ref|XM_506174.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.153
           mRNA
          Length = 1772

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 472 gccgtcgtgctctccgccggctaccgcctc 501
           ||||||||||||||||||| ||||||||||
Sbjct: 370 gccgtcgtgctctccgccgactaccgcctc 399



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 365 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 408
           ||||||| |||||||||||| ||| ||| ||||| |||||||||
Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
to top
>dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G12, full
           insert sequence
          Length = 1772

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 472 gccgtcgtgctctccgccggctaccgcctc 501
           ||||||||||||||||||| ||||||||||
Sbjct: 370 gccgtcgtgctctccgccgactaccgcctc 399



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 365 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 408
           ||||||| |||||||||||| ||| ||| ||||| |||||||||
Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
to top
>dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H03, full
           insert sequence
          Length = 1189

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 472 gccgtcgtgctctccgccggctaccgcctc 501
           ||||||||||||||||||| ||||||||||
Sbjct: 370 gccgtcgtgctctccgccgactaccgcctc 399



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 365 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 408
           ||||||| |||||||||||| ||| ||| ||||| |||||||||
Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
to top
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 472    gccgtcgtgctctccgccggctaccgcctc 501
              ||||||||||||||||||| ||||||||||
Sbjct: 188027 gccgtcgtgctctccgccgactaccgcctc 187998



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 365    ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 408
              ||||||| |||||||||||| ||| ||| ||||| |||||||||
Sbjct: 188134 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 188091



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 108/136 (79%)
 Strand = Plus / Minus

                                                                          
Query: 366    gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 425
              ||||||||||||| | ||  ||| ||||||||| ||||||||| ||||||| || || ||
Sbjct: 185130 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 185071

                                                                          
Query: 426    ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 485
              |   ||| |||||  |  ||| |||||||||||||| |||  |  |||||| ||||||||
Sbjct: 185070 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 185011

                              
Query: 486    cgccggctaccgcctc 501
              |  || ||||||||||
Sbjct: 185010 cttcgactaccgcctc 184995
to top
>ref|NM_186421.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1199

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 108/136 (79%)
 Strand = Plus / Plus

                                                                       
Query: 366 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 425
           ||||||||||||| | ||  ||| ||||||||| ||||||||| ||||||| || || ||
Sbjct: 303 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 362

                                                                       
Query: 426 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 485
           |   ||| |||||  |  ||| |||||||||||||| |||  |  |||||| ||||||||
Sbjct: 363 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 422

                           
Query: 486 cgccggctaccgcctc 501
           |  || ||||||||||
Sbjct: 423 cttcgactaccgcctc 438
to top
>ref|XM_507352.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152
           mRNA
          Length = 1375

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 108/136 (79%)
 Strand = Plus / Plus

                                                                       
Query: 366 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 425
           ||||||||||||| | ||  ||| ||||||||| ||||||||| ||||||| || || ||
Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371

                                                                       
Query: 426 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 485
           |   ||| |||||  |  ||| |||||||||||||| |||  |  |||||| ||||||||
Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431

                           
Query: 486 cgccggctaccgcctc 501
           |  || ||||||||||
Sbjct: 432 cttcgactaccgcctc 447
to top
>ref|XM_506173.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152
           mRNA
          Length = 1378

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 108/136 (79%)
 Strand = Plus / Plus

                                                                       
Query: 366 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 425
           ||||||||||||| | ||  ||| ||||||||| ||||||||| ||||||| || || ||
Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371

                                                                       
Query: 426 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 485
           |   ||| |||||  |  ||| |||||||||||||| |||  |  |||||| ||||||||
Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431

                           
Query: 486 cgccggctaccgcctc 501
           |  || ||||||||||
Sbjct: 432 cttcgactaccgcctc 447
to top
>dbj|AK106142.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G10, full
           insert sequence
          Length = 1199

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 108/136 (79%)
 Strand = Plus / Plus

                                                                       
Query: 366 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 425
           ||||||||||||| | ||  ||| ||||||||| ||||||||| ||||||| || || ||
Sbjct: 303 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 362

                                                                       
Query: 426 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 485
           |   ||| |||||  |  ||| |||||||||||||| |||  |  |||||| ||||||||
Sbjct: 363 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 422

                           
Query: 486 cgccggctaccgcctc 501
           |  || ||||||||||
Sbjct: 423 cttcgactaccgcctc 438
to top
>dbj|AK106008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A09, full
           insert sequence
          Length = 1375

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 108/136 (79%)
 Strand = Plus / Plus

                                                                       
Query: 366 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 425
           ||||||||||||| | ||  ||| ||||||||| ||||||||| ||||||| || || ||
Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371

                                                                       
Query: 426 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 485
           |   ||| |||||  |  ||| |||||||||||||| |||  |  |||||| ||||||||
Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431

                           
Query: 486 cgccggctaccgcctc 501
           |  || ||||||||||
Sbjct: 432 cttcgactaccgcctc 447
to top
>dbj|AK061530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E02, full
           insert sequence
          Length = 1377

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 108/136 (79%)
 Strand = Plus / Plus

                                                                       
Query: 366 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 425
           ||||||||||||| | ||  ||| ||||||||| ||||||||| ||||||| || || ||
Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371

                                                                       
Query: 426 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 485
           |   ||| |||||  |  ||| |||||||||||||| |||  |  |||||| ||||||||
Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431

                           
Query: 486 cgccggctaccgcctc 501
           |  || ||||||||||
Sbjct: 432 cttcgactaccgcctc 447
to top
>ref|NM_192768.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1728

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 474 cgtcgtgctctccgccggctac 495
           ||||||||||||||||||||||
Sbjct: 948 cgtcgtgctctccgccggctac 969
to top
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
             complete sequence
          Length = 136713

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 454   ctcgccgcggaggccggcgccg 475
             ||||||||||||||||||||||
Sbjct: 80135 ctcgccgcggaggccggcgccg 80156
to top
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete
             sequence
          Length = 50000

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 472   gccgtcgtgctctccgccggctaccgcctc 501
             ||||||||||| ||||||| ||||||||||
Sbjct: 18127 gccgtcgtgctttccgccgactaccgcctc 18098
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 454     ctcgccgcggaggccggcgccg 475
               ||||||||||||||||||||||
Sbjct: 4105441 ctcgccgcggaggccggcgccg 4105462
to top
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 474   cgtcgtgctctccgccggctac 495
             ||||||||||||||||||||||
Sbjct: 77393 cgtcgtgctctccgccggctac 77414
to top
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0507H12
          Length = 143030

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 462   ggaggccggcgccgtcgtgctctccg 487
             |||||||||||||||||||| |||||
Sbjct: 72134 ggaggccggcgccgtcgtgcactccg 72109
to top
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1118_D07
          Length = 131449

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 462    ggaggccggcgccgtcgtgctctccg 487
              |||||||||||||||||||| |||||
Sbjct: 119774 ggaggccggcgccgtcgtgcactccg 119749
to top
>dbj|AK073439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044H02, full
           insert sequence
          Length = 1988

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 454 ctcgccgcggaggccggcgccg 475
           ||||||||||||||||||||||
Sbjct: 172 ctcgccgcggaggccggcgccg 151
to top
>dbj|AK073204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022O11, full
           insert sequence
          Length = 1701

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 462 ggaggccggcgccgtcgtgctctccg 487
           |||||||||||||||||||| |||||
Sbjct: 254 ggaggccggcgccgtcgtgcactccg 279
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 369     gctgccggtgctcgtccactaccatggcgggggcttc 405
               |||||| | ||||||| ||||||||||||| ||||||
Sbjct: 2243550 gctgcccgcgctcgtctactaccatggcggcggcttc 2243514
to top
>ref|XM_463670.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 470 gcgccgtcgtgctctccgccg 490
           |||||||||||||||||||||
Sbjct: 209 gcgccgtcgtgctctccgccg 229
to top
>gb|BT017391.1| Zea mays clone EL01N0327F05.c mRNA sequence
          Length = 1246

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 472 gccgtcgtgctctccgccggctaccgcct 500
           ||||| ||||||||||||| |||||||||
Sbjct: 395 gccgtggtgctctccgccgactaccgcct 423
to top
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene
            encoding chloroplast protein, complete cds
          Length = 2992

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 431  acatccacagcttctgtctccgcct 455
            |||||| ||||||||||||||||||
Sbjct: 1840 acatccccagcttctgtctccgcct 1816
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 458    ccgcggaggccggcgccgtcg 478
              |||||||||||||||||||||
Sbjct: 521611 ccgcggaggccggcgccgtcg 521591
to top
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1033B05
          Length = 138882

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 470    gcgccgtcgtgctctccgccg 490
              |||||||||||||||||||||
Sbjct: 117777 gcgccgtcgtgctctccgccg 117797
to top
>gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the complete genome
          Length = 13219

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 353  agcaggccggccggaagctgc 373
            |||||||||||||||||||||
Sbjct: 4979 agcaggccggccggaagctgc 4999
to top
>dbj|AK109471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E06, full
           insert sequence
          Length = 1365

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 470 gcgccgtcgtgctctccgccg 490
           |||||||||||||||||||||
Sbjct: 262 gcgccgtcgtgctctccgccg 282
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 346     ggcggtgagcaggccggccgg 366
               |||||||||||||||||||||
Sbjct: 4893917 ggcggtgagcaggccggccgg 4893897
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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 470   gcgccgtcgtgctctccgccg 490
             |||||||||||||||||||||
Sbjct: 36168 gcgccgtcgtgctctccgccg 36188
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>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0061D06, complete sequence
          Length = 172126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 452   gcctcgccgcggaggccggcgccg 475
             |||||||||||| |||||||||||
Sbjct: 93419 gcctcgccgcggcggccggcgccg 93396
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 451   cgcctcgccgcggaggccggcgcc 474
             |||||||||| |||||||||||||
Sbjct: 83546 cgcctcgccgaggaggccggcgcc 83569
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 471     cgccgtcgtgctctccgccg 490
               ||||||||||||||||||||
Sbjct: 4806666 cgccgtcgtgctctccgccg 4806685
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>gb|DQ150097.1| Triticum aestivum pyridoxine biosynthesis protein mRNA, complete
           cds
          Length = 945

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 451 cgcctcgccgcggaggccggcgcc 474
           |||||||||| |||||||||||||
Sbjct: 157 cgcctcgccgaggaggccggcgcc 180
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>gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosome 12, complete
             sequence
          Length = 199646

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 38    atagctagcagcattttctgttatttct 65
             ||||||||||||||||| ||||| ||||
Sbjct: 37979 atagctagcagcattttttgttaattct 37952
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>emb|AL606519.6| Human DNA sequence from clone RP11-339D23 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 75939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    cattttctgttatttctaat 68
             ||||||||||||||||||||
Sbjct: 30338 cattttctgttatttctaat 30357
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>emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chromosome 6 Contains the
              CDYL gene for a Y chromosome-like chromodomain protein, a
              ribosomal protein S18 (RPS18) pseudogene, the gene for
              ribonuclease P 40kD subunit (RPP40) and CpG islands,
              complete sequence
          Length = 166863

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      tttcctttccctcttactaa 24
              ||||||||||||||||||||
Sbjct: 120177 tttcctttccctcttactaa 120158
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>gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, complete sequence
          Length = 159205

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     agctagcagcattttctgtt 59
              ||||||||||||||||||||
Sbjct: 138784 agctagcagcattttctgtt 138765
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>emb|CR378679.1| Photobacterium profundum SS9 chromosome 2; segment 5/7
          Length = 349464

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   gcagcattttctgttatttc 64
            ||||||||||||||||||||
Sbjct: 2400 gcagcattttctgttatttc 2419
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>dbj|AB242144.1| Argiope bruennichi CySp1 mRNA for egg case silk protein 1, complete
            cds
          Length = 9149

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 230  accagccagagttctgcccgatca 253
            |||||||||||| |||||||||||
Sbjct: 2648 accagccagagtgctgcccgatca 2671
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>gb|AF213908.1| Influenza A virus (A/Swine/Italy/25823/94(H3N2)) segment 8
           non-structural protein (NS) gene, partial cds
          Length = 294

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  attttctgttatttctaatc 69
           ||||||||||||||||||||
Sbjct: 195 attttctgttatttctaatc 176
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>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   cgccgtcgtgctctccgccg 490
             ||||||||||||||||||||
Sbjct: 28789 cgccgtcgtgctctccgccg 28770
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>ref|NM_064210.2| Caenorhabditis elegans C50E10.1 (C50E10.1) mRNA, complete cds
          Length = 506

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 19 tactaaccctttcgactaca 38
          ||||||||||||||||||||
Sbjct: 4  tactaaccctttcgactaca 23
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 451      cgcctcgccgcggaggccggcgcc 474
                |||||||||| |||||||||||||
Sbjct: 28352924 cgcctcgccgaggaggccggcgcc 28352947



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 452     gcctcgccgcggaggccggcgccg 475
               |||||||||||| |||||||||||
Sbjct: 9656258 gcctcgccgcggcggccggcgccg 9656281
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 390      ccatggcgggggcttctgcctcggctcg 417
                |||||| || ||||||||||||||||||
Sbjct: 17418105 ccatggaggcggcttctgcctcggctcg 17418132
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 471     cgccgtcgtgctctccgccg 490
               ||||||||||||||||||||
Sbjct: 4806781 cgccgtcgtgctctccgccg 4806800
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>gb|AC154904.4| Mus musculus BAC clone RP23-416C3 from chromosome 12, complete sequence
          Length = 194547

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 38     atagctagcagcattttctgttatttct 65
              ||||||||||||||||| ||||| ||||
Sbjct: 175838 atagctagcagcattttttgttaattct 175811
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>gb|AF157014.1|AF157014 Mus musculus Pax-5 protein gene, partial cds
          Length = 1866

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 accttcccctgcgaccaccc 272
           ||||||||||||||||||||
Sbjct: 431 accttcccctgcgaccaccc 450
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    ggcggcggtgagcaggccgg 362
              ||||||||||||||||||||
Sbjct: 566411 ggcggcggtgagcaggccgg 566430
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>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054F02
          Length = 180651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 390    ccatggcgggggcttctgcctcggctcg 417
              |||||| || ||||||||||||||||||
Sbjct: 142018 ccatggaggcggcttctgcctcggctcg 142045
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>dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G07, full
           insert sequence
          Length = 938

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 452 gcctcgccgcggaggccggcgccg 475
           |||||||||||| |||||||||||
Sbjct: 47  gcctcgccgcggcggccggcgccg 70
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>dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100O03, full
           insert sequence
          Length = 896

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 452 gcctcgccgcggaggccggcgccg 475
           |||||||||||| |||||||||||
Sbjct: 62  gcctcgccgcggcggccggcgccg 85
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>dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071C10, full
           insert sequence
          Length = 954

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 452 gcctcgccgcggaggccggcgccg 475
           |||||||||||| |||||||||||
Sbjct: 51  gcctcgccgcggcggccggcgccg 74
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>gb|AF098988.4| Caenorhabditis elegans cosmid C50E10, complete sequence
          Length = 43461

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   tactaaccctttcgactaca 38
            ||||||||||||||||||||
Sbjct: 1322 tactaaccctttcgactaca 1303
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>dbj|AK063409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A12, full
           insert sequence
          Length = 1259

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 451 cgcctcgccgcggaggccggcgcc 474
           |||||||||| |||||||||||||
Sbjct: 211 cgcctcgccgaggaggccggcgcc 234
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>dbj|AP000873.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727A23, complete
              sequence
          Length = 174905

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     ttctgttatttctaatcgca 72
              ||||||||||||||||||||
Sbjct: 172280 ttctgttatttctaatcgca 172261
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 456     cgccgcggaggccggcgccg 475
               ||||||||||||||||||||
Sbjct: 2038834 cgccgcggaggccggcgccg 2038853
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>gb|AC139149.6| Homo sapiens chromosome 17, clone RP13-766D20, complete sequence
          Length = 81577

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 452   gcctcgccgcggaggccggcgccg 475
             ||||||||||||||||| ||||||
Sbjct: 43474 gcctcgccgcggaggcccgcgccg 43451
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 451      cgcctcgccgcggaggccggcgcc 474
                |||||||||| |||||||||||||
Sbjct: 28335373 cgcctcgccgaggaggccggcgcc 28335396



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 452     gcctcgccgcggaggccggcgccg 475
               |||||||||||| |||||||||||
Sbjct: 9727955 gcctcgccgcggcggccggcgccg 9727978
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>emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chromosome 4, complete
              sequence
          Length = 206709

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    accttcccctgcgaccaccc 272
              ||||||||||||||||||||
Sbjct: 191717 accttcccctgcgaccaccc 191698
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>emb|CT005238.2| Methylocapsa acidiphila B2, overlapping BAC clones, complete sequence
          Length = 100887

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 465   ggccggcgccgtcgtgctctccgccggc 492
             ||||| ||||| ||||||||||||||||
Sbjct: 40331 ggccgacgccggcgtgctctccgccggc 40358
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>emb|AJ342831.1|HSA342831 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GB4R
          Length = 752

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 452 gcctcgccgcggaggccggcgccg 475
           ||||||||||||||||| ||||||
Sbjct: 64  gcctcgccgcggaggcccgcgccg 41


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,068,205
Number of Sequences: 3902068
Number of extensions: 3068205
Number of successful extensions: 65366
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64306
Number of HSP's gapped (non-prelim): 1060
length of query: 501
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 479
effective length of database: 17,147,199,772
effective search space: 8213508690788
effective search space used: 8213508690788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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