ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart10f12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475461.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 750 Score = 490 bits (247), Expect = e-135 Identities = 382/427 (89%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 |||||||||||||| ||||| |||||||| ||||||||||| |||||||| || || ||| Sbjct: 1 atgagtagcatagggactggttatgatctttccgtcaccaccttctccccagatggccgt 60 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 61 gtcttccaggttgagtatgctggcaaggccgtcgacaacagcgggactgttgttggcatc 120 Query: 244 aaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaagatgatactt 303 |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | Sbjct: 121 aaatgcaaagatgggattgtccttggtgtggagaagctggtaacatcaaagatgattttg 180 Query: 304 gccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggctgtggctggg 363 |||||||| |||||||| || || |||||||| |||||||||||||||| ||||| Sbjct: 181 aaggggtcgaatcggagactccactctgtgcaccgacactctggcttggctgttgctggt 240 Query: 364 ttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagccaattatgaa 423 ||||| || || ||||||||||||||||| || ||||||||||| ||||||| ||||||| Sbjct: 241 ttagctgcggatggtaggcagatagtctctagggcaaagtcagaggcagccagttatgaa 300 Query: 424 aaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgtt 483 ||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 301 aaggtgtatggagaacccatgcctgtaaaggaattggctgatcgtgtagctagctatgta 360 Query: 484 catctgtgtacactctactggtggctcaggccttttggctgtggagttattcttggaggt 543 ||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 catttatgtaccctctactggtggctcaggccttttggctgtggagttattcttggaggt 420 Query: 544 tacgata 550 || |||| Sbjct: 421 tatgata 427
>gb|AY109645.1| Zea mays CL4356_2 mRNA sequence Length = 1252 Score = 373 bits (188), Expect = e-100 Identities = 374/436 (85%) Strand = Plus / Minus Query: 115 aacttaacaatgagtagcataggaactgggtatgatctgtccgtcaccactttctccccg 174 ||||| |||||||| |||||||| || || || |||||||| |||||||| |||||||| Sbjct: 1045 aacttgacaatgagcagcataggcacaggttacgatctgtctgtcaccaccttctcccca 986 Query: 175 gacggacgtgtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatc 234 || || ||||||||||||||||| |||||| |||||||||||||||||||||||| | Sbjct: 985 gatggtcgtgtcttccaggtcgaatatgctaccaaggccgtcgacaacagcgggactgtt 926 Query: 235 gttgggatcaaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaag 294 ||||||||||| ||||||||||| |||||||| ||||| ||||||||| ||||||||||| Sbjct: 925 gttgggatcaagtgcaaagatggcattgtcctgggtgttgagaagctggtaacctcaaag 866 Query: 295 atgatacttgccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggct 354 ||||| || | ||||| |||||||| | ||||| ||||||||| |||||||||||||| Sbjct: 865 atgatgctggaagggtcaaaccggaggatccattcagtgcaccggcactctggcttggct 806 Query: 355 gtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagcc 414 || ||||| ||||||||||| || ||||| || || ||||| | ||||||||||| ||| Sbjct: 805 gttgctggtttagcagcagatggcaggcaaattgtttcaaggacgaagtcagaagctgcc 746 Query: 415 aattatgaaaaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgct 474 | |||||||||||| || ||||||||||| ||||| |||||||| || |||||||| || Sbjct: 745 agttatgaaaaggtctatggagaacccattcctgtgaaggaattggcagatcgtgtagca 686 Query: 475 agctatgttcatctgtgtacactctactggtggctcaggccttttggctgtggagttatt 534 || ||||||||||| || || || |||||||||||||| |||||||| || || |||||| Sbjct: 685 agttatgttcatctttgcacgctgtactggtggctcagaccttttggttgcggtgttatt 626 Query: 535 cttggaggttacgata 550 ||||||||||| |||| Sbjct: 625 cttggaggttatgata 610
>ref|NM_191042.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 750 Score = 323 bits (163), Expect = 3e-85 Identities = 361/427 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||| || || Sbjct: 1 atgagcagcataggcacaggatacgatctgtccgttaccaccttctctccggatggtcgc 60 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 ||||||||||| |||||||| ||||| ||||||||||||||||| | ||||| ||| Sbjct: 61 gtcttccaggttgagtatgccacgaaggctgtcgacaacagcgggactgttgttggaatc 120 Query: 244 aaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaagatgatactt 303 ||||||||||||||||| ||||| |||||||||||||| |||| || |||||||| || Sbjct: 121 aaatgcaaagatggaatcgtcctgggtgtggagaagctagtaacttcgaagatgatgctg 180 Query: 304 gccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggctgtggctggg 363 | || || || |||| | ||||| |||||| || |||||||||||||||| ||||| Sbjct: 181 gagggatctaataggaggatccattcagtgcactggcactctggcttggctgttgctggt 240 Query: 364 ttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagccaattatgaa 423 ||||| ||||| || ||||| || || ||||||||||| || ||||| |||| |||||| Sbjct: 241 ttagctgcagatggcaggcaaattgtttcaagagcaaaatcggaagcggccagttatgag 300 Query: 424 aaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgtt 483 ||||| || || |||||||| ||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 301 aaggtctatggtgaacccatttctgtaaaagaattggctgatcgtgtggctagctacgtt 360 Query: 484 catctgtgtacactctactggtggctcaggccttttggctgtggagttattcttggaggt 543 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 361 catctttgtacactctactggtggctcaggccttttggttgtggagttattcttggaggt 420 Query: 544 tacgata 550 || |||| Sbjct: 421 tatgata 427
>dbj|AK103541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132C12, full insert sequence Length = 1188 Score = 323 bits (163), Expect = 3e-85 Identities = 361/427 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||| || || Sbjct: 255 atgagcagcataggcacaggatacgatctgtccgttaccaccttctctccggatggtcgc 314 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 ||||||||||| |||||||| ||||| ||||||||||||||||| | ||||| ||| Sbjct: 315 gtcttccaggttgagtatgccacgaaggctgtcgacaacagcgggactgttgttggaatc 374 Query: 244 aaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaagatgatactt 303 ||||||||||||||||| ||||| |||||||||||||| |||| || |||||||| || Sbjct: 375 aaatgcaaagatggaatcgtcctgggtgtggagaagctagtaacttcgaagatgatgctg 434 Query: 304 gccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggctgtggctggg 363 | || || || |||| | ||||| |||||| || |||||||||||||||| ||||| Sbjct: 435 gagggatctaataggaggatccattcagtgcactggcactctggcttggctgttgctggt 494 Query: 364 ttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagccaattatgaa 423 ||||| ||||| || ||||| || || ||||||||||| || ||||| |||| |||||| Sbjct: 495 ttagctgcagatggcaggcaaattgtttcaagagcaaaatcggaagcggccagttatgag 554 Query: 424 aaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgtt 483 ||||| || || |||||||| ||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 555 aaggtctatggtgaacccatttctgtaaaagaattggctgatcgtgtggctagctacgtt 614 Query: 484 catctgtgtacactctactggtggctcaggccttttggctgtggagttattcttggaggt 543 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 615 catctttgtacactctactggtggctcaggccttttggttgtggagttattcttggaggt 674 Query: 544 tacgata 550 || |||| Sbjct: 675 tatgata 681
>dbj|AK061784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E06, full insert sequence Length = 1120 Score = 323 bits (163), Expect = 3e-85 Identities = 361/427 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||| || || Sbjct: 188 atgagcagcataggcacaggatacgatctgtccgttaccaccttctctccggatggtcgc 247 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 ||||||||||| |||||||| ||||| ||||||||||||||||| | ||||| ||| Sbjct: 248 gtcttccaggttgagtatgccacgaaggctgtcgacaacagcgggactgttgttggaatc 307 Query: 244 aaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaagatgatactt 303 ||||||||||||||||| ||||| |||||||||||||| |||| || |||||||| || Sbjct: 308 aaatgcaaagatggaatcgtcctgggtgtggagaagctagtaacttcgaagatgatgctg 367 Query: 304 gccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggctgtggctggg 363 | || || || |||| | ||||| |||||| || |||||||||||||||| ||||| Sbjct: 368 gagggatctaataggaggatccattcagtgcactggcactctggcttggctgttgctggt 427 Query: 364 ttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagccaattatgaa 423 ||||| ||||| || ||||| || || ||||||||||| || ||||| |||| |||||| Sbjct: 428 ttagctgcagatggcaggcaaattgtttcaagagcaaaatcggaagcggccagttatgag 487 Query: 424 aaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgtt 483 ||||| || || |||||||| ||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 488 aaggtctatggtgaacccatttctgtaaaagaattggctgatcgtgtggctagctacgtt 547 Query: 484 catctgtgtacactctactggtggctcaggccttttggctgtggagttattcttggaggt 543 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 548 catctttgtacactctactggtggctcaggccttttggttgtggagttattcttggaggt 607 Query: 544 tacgata 550 || |||| Sbjct: 608 tatgata 614
>dbj|AB026562.1| Oryza sativa (japonica cultivar-group) OsPAG1 mRNA for alpha 7 subunit of 20S proteasome, complete cds Length = 1091 Score = 323 bits (163), Expect = 3e-85 Identities = 361/427 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||| || || Sbjct: 151 atgagcagcataggcacaggatacgatctgtccgttaccaccttctctccggatggtcgc 210 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 ||||||||||| |||||||| ||||| ||||||||||||||||| | ||||| ||| Sbjct: 211 gtcttccaggttgagtatgccacgaaggctgtcgacaacagcgggactgttgttggaatc 270 Query: 244 aaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaagatgatactt 303 ||||||||||||||||| ||||| |||||||||||||| |||| || |||||||| || Sbjct: 271 aaatgcaaagatggaatcgtcctgggtgtggagaagctagtaacttcgaagatgatgctg 330 Query: 304 gccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggctgtggctggg 363 | || || || |||| | ||||| |||||| || |||||||||||||||| ||||| Sbjct: 331 gagggatctaataggaggatccattcagtgcactggcactctggcttggctgttgctggt 390 Query: 364 ttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagccaattatgaa 423 ||||| ||||| || ||||| || || ||||||||||| || ||||| |||| |||||| Sbjct: 391 ttagctgcagatggcaggcaaattgtttcaagagcaaaatcggaagcggccagttatgag 450 Query: 424 aaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgtt 483 ||||| || || |||||||| ||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 451 aaggtctatggtgaacccatttctgtaaaagaattggctgatcgtgtggctagctacgtt 510 Query: 484 catctgtgtacactctactggtggctcaggccttttggctgtggagttattcttggaggt 543 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 511 catctttgtacactctactggtggctcaggccttttggttgtggagttattcttggaggt 570 Query: 544 tacgata 550 || |||| Sbjct: 571 tatgata 577
>gb|BT017777.1| Zea mays clone EL01N0503B10.c mRNA sequence Length = 1266 Score = 317 bits (160), Expect = 2e-83 Identities = 367/436 (84%) Strand = Plus / Plus Query: 115 aacttaacaatgagtagcataggaactgggtatgatctgtccgtcaccactttctccccg 174 ||||| || ||||| |||||||| || || || ||| |||| ||||| ||||||||||| Sbjct: 178 aacttgaccatgagcagcataggcacaggttacgatttgtctgtcacgactttctcccca 237 Query: 175 gacggacgtgtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatc 234 || || ||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 238 gatggtcgtgtcttccaggtcgagtatgccaccaaggccgtcgacaacagcgggactgtt 297 Query: 235 gttgggatcaaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaag 294 ||||||||||| ||||||||||| |||||||| ||||| ||||||||| ||||||||||| Sbjct: 298 gttgggatcaagtgcaaagatggcattgtcctgggtgtcgagaagctggtaacctcaaag 357 Query: 295 atgatacttgccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggct 354 ||||| || | || || ||||| || | ||||| |||||||| |||||||||||| | Sbjct: 358 atgatgctggaaggatcaaaccgaaggatccattcggtgcaccgtcactctggcttggtt 417 Query: 355 gtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagcc 414 || ||||| ||||||||||| || ||||| || || ||||| | || |||||||| ||| Sbjct: 418 gttgctggtttagcagcagatggcaggcaaattgtttcaaggaccaaatcagaagctgcc 477 Query: 415 aattatgaaaaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgct 474 | |||||||||||| || ||||||||||| |||| |||||||| ||||||||||| || Sbjct: 478 agttatgaaaaggtttatggagaacccatttctgtgaaggaattggctgatcgtgtggca 537 Query: 475 agctatgttcatctgtgtacactctactggtggctcaggccttttggctgtggagttatt 534 || ||||||||||| || || || ||||||||||||||||||||||| || || |||||| Sbjct: 538 agttatgttcatctttgcacgctgtactggtggctcaggccttttggttgcggtgttatt 597 Query: 535 cttggaggttacgata 550 || |||||||| |||| Sbjct: 598 ctaggaggttatgata 613
>gb|BT017004.1| Zea mays clone EK07D2310A08.c mRNA sequence Length = 1256 Score = 309 bits (156), Expect = 5e-81 Identities = 366/436 (83%) Strand = Plus / Plus Query: 115 aacttaacaatgagtagcataggaactgggtatgatctgtccgtcaccactttctccccg 174 ||||| || ||||| || ||||| || || || ||| |||| ||||| ||||||||||| Sbjct: 172 aacttgaccatgagcaggataggcacaggttacgatttgtctgtcacgactttctcccca 231 Query: 175 gacggacgtgtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatc 234 || || ||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 232 gatggtcgtgtcttccaggtcgagtatgccaccaaggccgtcgacaacagcgggactgtt 291 Query: 235 gttgggatcaaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaag 294 ||||||||||| ||||||||||| |||||||| ||||| ||||||||| ||||||||||| Sbjct: 292 gttgggatcaagtgcaaagatggcattgtcctgggtgtcgagaagctggtaacctcaaag 351 Query: 295 atgatacttgccgggtcgaaccggagacttcattccgtgcaccggaactctggcttggct 354 ||||| || | || || ||||| || | ||||| |||||||| |||||||||||| | Sbjct: 352 atgatgctggaaggatcaaaccgaaggatccattcggtgcaccgtcactctggcttggtt 411 Query: 355 gtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagcagcc 414 || ||||| ||||||||||| || ||||| || || ||||| | || |||||||| ||| Sbjct: 412 gttgctggtttagcagcagatggcaggcaaattgtttcaaggaccaaatcagaagctgcc 471 Query: 415 aattatgaaaaggtatacggagaacccatgcctgtaaaggaattagctgatcgtgttgct 474 | |||||||||||| || ||||||||||| |||| |||||||| ||||||||||| || Sbjct: 472 agttatgaaaaggtttatggagaacccatttctgtgaaggaattggctgatcgtgtggca 531 Query: 475 agctatgttcatctgtgtacactctactggtggctcaggccttttggctgtggagttatt 534 || ||||||||||| || || || ||||||||||||||||||||||| || || |||||| Sbjct: 532 agttatgttcatctttgcacgctgtactggtggctcaggccttttggttgcggtgttatt 591 Query: 535 cttggaggttacgata 550 || |||||||| |||| Sbjct: 592 ctaggaggttatgata 607
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 170 bits (86), Expect = 3e-39 Identities = 116/126 (92%) Strand = Plus / Minus Query: 103 agggcttgaagcaacttaacaatgagtagcataggaactgggtatgatctgtccgtcacc 162 |||| |||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 48999 aggggttgaagcaacttcacaatgagtagcatagggactggttatgatctttccgtcacc 48940 Query: 163 actttctccccggacggacgtgtcttccaggtcgagtatgctggcaaggccgtcgacaac 222 || |||||||| || || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 48939 accttctccccagatggccgtgtcttccaggttgagtatgctggcaaggccgtcgacaac 48880 Query: 223 agcggg 228 |||||| Sbjct: 48879 agcggg 48874 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 433 ggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgttcatctgtgt 492 |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| | ||| Sbjct: 48138 ggagaacccatgcctgtaaaggaattggctgatcgtgtagctagctatgtacatttatgt 48079 Query: 493 acactctactggtggctcagg 513 || |||||||||||||||||| Sbjct: 48078 accctctactggtggctcagg 48058 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 351 ggctgtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagc 410 |||||| ||||| ||||| || || ||||||||||||||||| || ||||||||||| || Sbjct: 48291 ggctgttgctggtttagctgcggatggtaggcagatagtctctagggcaaagtcagaggc 48232 Query: 411 agccaattatgaaaag 426 ||||| |||||||||| Sbjct: 48231 agccagttatgaaaag 48216 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 509 tcaggccttttggctgtggagttattcttggaggttacgata 550 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 47985 tcaggccttttggctgtggagttattcttggaggttatgata 47944 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 268 ggtgtggagaagctgataacctcaaagatgatacttgccgggtcgaaccggagacttcat 327 ||||||||||||||| |||| ||||||||||| | |||||||| |||||||| || Sbjct: 48655 ggtgtggagaagctggtaacatcaaagatgattttgaaggggtcgaatcggagactccac 48596 Query: 328 tccgtgcaccggaactctggcttgg 352 || |||||||| |||||||||||| Sbjct: 48595 tctgtgcaccgacactctggcttgg 48571 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 8 ccccaccttcttgcgccacaagccggagccg 38 ||||||||||||||||||||||||| ||||| Sbjct: 49940 ccccaccttcttgcgccacaagccgaagccg 49910 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 235 gttgggatcaaatgcaaagatggaattgtccttg 268 ||||| ||||||||||||||||| |||||||||| Sbjct: 48780 gttggcatcaaatgcaaagatgggattgtccttg 48747
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 170 bits (86), Expect = 3e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 103 agggcttgaagcaacttaacaatgagtagcataggaactgggtatgatctgtccgtcacc 162 |||| |||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 31892 aggggttgaagcaacttcacaatgagtagcatagggactggttatgatctttccgtcacc 31951 Query: 163 actttctccccggacggacgtgtcttccaggtcgagtatgctggcaaggccgtcgacaac 222 || |||||||| || || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31952 accttctccccagatggccgtgtcttccaggttgagtatgctggcaaggccgtcgacaac 32011 Query: 223 agcggg 228 |||||| Sbjct: 32012 agcggg 32017 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 433 ggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgttcatctgtgt 492 |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| | ||| Sbjct: 32756 ggagaacccatgcctgtaaaggaattggctgatcgtgtagctagctatgtacatttatgt 32815 Query: 493 acactctactggtggctcagg 513 || |||||||||||||||||| Sbjct: 32816 accctctactggtggctcagg 32836 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 351 ggctgtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagc 410 |||||| ||||| ||||| || || ||||||||||||||||| || ||||||||||| || Sbjct: 32603 ggctgttgctggtttagctgcggatggtaggcagatagtctctagggcaaagtcagaggc 32662 Query: 411 agccaattatgaaaag 426 ||||| |||||||||| Sbjct: 32663 agccagttatgaaaag 32678 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 509 tcaggccttttggctgtggagttattcttggaggttacgata 550 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 32909 tcaggccttttggctgtggagttattcttggaggttatgata 32950 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 268 ggtgtggagaagctgataacctcaaagatgatacttgccgggtcgaaccggagacttcat 327 ||||||||||||||| |||| ||||||||||| | |||||||| |||||||| || Sbjct: 32238 ggtgtggagaagctggtaacatcaaagatgattttgaaggggtcgaatcggagactccac 32297 Query: 328 tccgtgcaccggaactctggcttgg 352 || |||||||| |||||||||||| Sbjct: 32298 tctgtgcaccgacactctggcttgg 32322 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 8 ccccaccttcttgcgccacaagccggagccg 38 ||||||||||||||||||||||||| ||||| Sbjct: 30951 ccccaccttcttgcgccacaagccgaagccg 30981 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 235 gttgggatcaaatgcaaagatggaattgtccttg 268 ||||| ||||||||||||||||| |||||||||| Sbjct: 32111 gttggcatcaaatgcaaagatgggattgtccttg 32144
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 170 bits (86), Expect = 3e-39 Identities = 116/126 (92%) Strand = Plus / Minus Query: 103 agggcttgaagcaacttaacaatgagtagcataggaactgggtatgatctgtccgtcacc 162 |||| |||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 23980510 aggggttgaagcaacttcacaatgagtagcatagggactggttatgatctttccgtcacc 23980451 Query: 163 actttctccccggacggacgtgtcttccaggtcgagtatgctggcaaggccgtcgacaac 222 || |||||||| || || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 23980450 accttctccccagatggccgtgtcttccaggttgagtatgctggcaaggccgtcgacaac 23980391 Query: 223 agcggg 228 |||||| Sbjct: 23980390 agcggg 23980385 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 433 ggagaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgttcatctgtgt 492 |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| | ||| Sbjct: 23979649 ggagaacccatgcctgtaaaggaattggctgatcgtgtagctagctatgtacatttatgt 23979590 Query: 493 acactctactggtggctcagg 513 || |||||||||||||||||| Sbjct: 23979589 accctctactggtggctcagg 23979569 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 351 ggctgtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagc 410 |||||| ||||| ||||| || || ||||||||||||||||| || ||||||||||| || Sbjct: 23979802 ggctgttgctggtttagctgcggatggtaggcagatagtctctagggcaaagtcagaggc 23979743 Query: 411 agccaattatgaaaag 426 ||||| |||||||||| Sbjct: 23979742 agccagttatgaaaag 23979727 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 509 tcaggccttttggctgtggagttattcttggaggttacgata 550 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23979496 tcaggccttttggctgtggagttattcttggaggttatgata 23979455 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 268 ggtgtggagaagctgataacctcaaagatgatacttgccgggtcgaaccggagacttcat 327 ||||||||||||||| |||| ||||||||||| | |||||||| |||||||| || Sbjct: 23980166 ggtgtggagaagctggtaacatcaaagatgattttgaaggggtcgaatcggagactccac 23980107 Query: 328 tccgtgcaccggaactctggcttgg 352 || |||||||| |||||||||||| Sbjct: 23980106 tctgtgcaccgacactctggcttgg 23980082 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 8 ccccaccttcttgcgccacaagccggagccg 38 ||||||||||||||||||||||||| ||||| Sbjct: 23981451 ccccaccttcttgcgccacaagccgaagccg 23981421 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 235 gttgggatcaaatgcaaagatggaattgtccttg 268 ||||| ||||||||||||||||| |||||||||| Sbjct: 23980291 gttggcatcaaatgcaaagatgggattgtccttg 23980258
>gb|AY106224.1| Zea mays PCO088072 mRNA sequence Length = 479 Score = 157 bits (79), Expect = 5e-35 Identities = 154/179 (86%) Strand = Plus / Plus Query: 121 acaatgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacgga 180 |||||||| |||||||| || || ||||||||||| |||||||| ||||| || || || Sbjct: 235 acaatgagcagcataggcacaggttatgatctgtctgtcaccaccttctctcccgatggc 294 Query: 181 cgtgtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttggg 240 || |||||||||||||||||||| ||||| ||||||||||||||||| | |||||| Sbjct: 295 cgcgtcttccaggtcgagtatgccacgaaggctgtcgacaacagcgggaccgttgttggg 354 Query: 241 atcaaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaagatgat 299 ||||| ||||||||||| ||||| || ||||| ||||||||| |||||||||||||||| Sbjct: 355 atcaagtgcaaagatggcattgttctgggtgtcgagaagctggtaacctcaaagatgat 413
>ref|NM_128260.3| Arabidopsis thaliana PAG1; endopeptidase/ peptidase/ threonine endopeptidase AT2G27020 (PAG1) mRNA, complete cds Length = 1024 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttg 520 |||| |||||||| || ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 456 ctgagcgtgttgcaagttatgtacatctgtgtaccctgtattggtggctcaggccttttg 515 Query: 521 gctgtggagttattcttggaggttacgata 550 ||||||| ||||||||||||||||| |||| Sbjct: 516 gctgtggggttattcttggaggttatgata 545 Score = 103 bits (52), Expect = 6e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 119 atgagtagcattggaactgggtacgatctctccgtcaccactttctctcccgatggccgt 178 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 || |||||| ||||||| || | || || ||||||||||| ||||| | ||||| ||| Sbjct: 179 gttttccagatcgagtacgccgctaaagctgtcgacaacagtgggactgttgttggaatc 238 Query: 244 aaatgcaaagatggaattgt 263 || ||||||||||| ||||| Sbjct: 239 aagtgcaaagatgggattgt 258
>emb|Y13693.1|ATY13693 Arabidopsis thaliana mRNA for proteasome subunit prc8 Length = 958 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttg 520 |||| |||||||| || ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 381 ctgagcgtgttgcaagttatgtacatctgtgtaccctgtattggtggctcaggccttttg 440 Query: 521 gctgtggagttattcttggaggttacgata 550 ||||||| ||||||||||||||||| |||| Sbjct: 441 gctgtggggttattcttggaggttatgata 470 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || || Sbjct: 44 atgagtagcattggaactgggtacgatctctccgtcaccactttctctcccgatggcggt 103 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 || |||||| ||||||| || | || || ||||||||||| ||||| | ||||| ||| Sbjct: 104 gttttccagatcgagtacgccgctaaagctgtcgacaacagtgggactgttgttggaatc 163 Query: 244 aaatgcaaagatggaattgt 263 || ||||||||||| ||||| Sbjct: 164 aagtgcaaagatgggattgt 183
>gb|AY124806.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds Length = 750 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttg 520 |||| |||||||| || ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 338 ctgagcgtgttgcaagttatgtacatctgtgtaccctgtattggtggctcaggccttttg 397 Query: 521 gctgtggagttattcttggaggttacgata 550 ||||||| ||||||||||||||||| |||| Sbjct: 398 gctgtggggttattcttggaggttatgata 427 Score = 103 bits (52), Expect = 6e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 1 atgagtagcattggaactgggtacgatctctccgtcaccactttctctcccgatggccgt 60 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 || |||||| ||||||| || | || || ||||||||||| ||||| | ||||| ||| Sbjct: 61 gttttccagatcgagtacgccgctaaagctgtcgacaacagtgggactgttgttggaatc 120 Query: 244 aaatgcaaagatggaattgt 263 || ||||||||||| ||||| Sbjct: 121 aagtgcaaagatgggattgt 140
>gb|AF375455.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds Length = 935 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttg 520 |||| |||||||| || ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 371 ctgagcgtgttgcaagttatgtacatctgtgtaccctgtattggtggctcaggccttttg 430 Query: 521 gctgtggagttattcttggaggttacgata 550 ||||||| ||||||||||||||||| |||| Sbjct: 431 gctgtggggttattcttggaggttatgata 460 Score = 103 bits (52), Expect = 6e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 34 atgagtagcattggaactgggtacgatctctccgtcaccactttctctcccgatggccgt 93 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 || |||||| ||||||| || | || || ||||||||||| ||||| | ||||| ||| Sbjct: 94 gttttccagatcgagtacgccgctaaagctgtcgacaacagtgggactgttgttggaatc 153 Query: 244 aaatgcaaagatggaattgt 263 || ||||||||||| ||||| Sbjct: 154 aagtgcaaagatgggattgt 173
>emb|BX819273.1|CNS0A9VK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 837 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttg 520 |||| |||||||| || ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 269 ctgagcgtgttgcaagttatgtacatctgtgtaccctgtattggtggctcaggccttttg 328 Query: 521 gctgtggagttattcttggaggttacgata 550 ||||||| ||||||||||||||||| |||| Sbjct: 329 gctgtggggttattcttggaggttatgata 358 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 214 gtcgacaacagcgggacgatcgttgggatcaaatgcaaagatggaattgt 263 ||||||||||| ||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 22 gtcgacaacagtgggactgttgttggaatcaagtgcaaagatgggattgt 71
>gb|AF043528.1|AF043528 Arabidopsis thaliana 20S proteasome subunit PAG1 (PAG1) mRNA, complete cds Length = 958 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttg 520 |||| |||||||| || ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 381 ctgagcgtgttgcaagttatgtacatctgtgtaccctgtattggtggctcaggccttttg 440 Query: 521 gctgtggagttattcttggaggttacgata 550 ||||||| ||||||||||||||||| |||| Sbjct: 441 gctgtggggttattcttggaggttatgata 470 Score = 103 bits (52), Expect = 6e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 44 atgagtagcattggaactgggtacgatctctccgtcaccactttctctcccgatggccgt 103 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 || |||||| ||||||| || | || || ||||||||||| ||||| | ||||| ||| Sbjct: 104 gttttccagatcgagtacgccgctaaagctgtcgacaacagtgggactgttgttggaatc 163 Query: 244 aaatgcaaagatggaattgt 263 || ||||||||||| ||||| Sbjct: 164 aagtgcaaagatgggattgt 183
>gb|AY088609.1| Arabidopsis thaliana clone 8342 mRNA, complete sequence Length = 1022 Score = 103 bits (52), Expect = 6e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 122 atgagtagcattggaactgggtacgatctctccgtcaccactttctctcccgatggccgt 181 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 || |||||| ||||||| || | || || ||||||||||| ||||| | ||||| ||| Sbjct: 182 gttttccagatcgagtacgccgctaaagctgtcgacaacagtgggactgttgttggaatc 241 Query: 244 aaatgcaaagatggaattgt 263 || ||||||||||| ||||| Sbjct: 242 aagtgcaaagatgggattgt 261 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttg 520 |||| |||||||| || ||||| ||| ||||||| || || ||||||||||||||||||| Sbjct: 459 ctgagcgtgttgcaagttatgtacatttgtgtaccctgtattggtggctcaggccttttg 518 Query: 521 gctgtggagttattcttggaggttacgata 550 ||||||| ||||||||||||||||| |||| Sbjct: 519 gctgtggggttattcttggaggttatgata 548
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 99.6 bits (50), Expect = 9e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 436 gaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgttcatctgtgtaca 495 |||||||| ||||||| ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 34465736 gaacccatttctgtaaaagaattggctgatcgtgtggctagctacgttcatctttgtaca 34465795 Query: 496 ctctactggtggctcagg 513 |||||||||||||||||| Sbjct: 34465796 ctctactggtggctcagg 34465813 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||| || || Sbjct: 34464923 atgagcagcataggcacaggatacgatctgtccgttaccaccttctctccggatggtcgc 34464982 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcggg 228 ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 34464983 gtcttccaggttgagtatgccacgaaggctgtcgacaacagcggg 34465027 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 509 tcaggccttttggctgtggagttattcttggaggttacgata 550 ||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 34465918 tcaggccttttggttgtggagttattcttggaggttatgata 34465959 Score = 48.1 bits (24), Expect = 0.031 Identities = 60/72 (83%) Strand = Plus / Plus Query: 351 ggctgtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagc 410 |||||| ||||| ||||| ||||| || ||||| || || ||||||||||| || ||||| Sbjct: 34465581 ggctgttgctggtttagctgcagatggcaggcaaattgtttcaagagcaaaatcggaagc 34465640 Query: 411 agccaattatga 422 |||| |||||| Sbjct: 34465641 ggccagttatga 34465652 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 235 gttgggatcaaatgcaaagatggaattgtcct 266 ||||| |||||||||||||||||||| ||||| Sbjct: 34465131 gttggaatcaaatgcaaagatggaatcgtcct 34465162
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 99.6 bits (50), Expect = 9e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 436 gaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgttcatctgtgtaca 495 |||||||| ||||||| ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 148080 gaacccatttctgtaaaagaattggctgatcgtgtggctagctacgttcatctttgtaca 148139 Query: 496 ctctactggtggctcagg 513 |||||||||||||||||| Sbjct: 148140 ctctactggtggctcagg 148157 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||| || || Sbjct: 147267 atgagcagcataggcacaggatacgatctgtccgttaccaccttctctccggatggtcgc 147326 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcggg 228 ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 147327 gtcttccaggttgagtatgccacgaaggctgtcgacaacagcggg 147371 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 509 tcaggccttttggctgtggagttattcttggaggttacgata 550 ||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 148262 tcaggccttttggttgtggagttattcttggaggttatgata 148303 Score = 48.1 bits (24), Expect = 0.031 Identities = 60/72 (83%) Strand = Plus / Plus Query: 351 ggctgtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagc 410 |||||| ||||| ||||| ||||| || ||||| || || ||||||||||| || ||||| Sbjct: 147925 ggctgttgctggtttagctgcagatggcaggcaaattgtttcaagagcaaaatcggaagc 147984 Query: 411 agccaattatga 422 |||| |||||| Sbjct: 147985 ggccagttatga 147996 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 235 gttgggatcaaatgcaaagatggaattgtcct 266 ||||| |||||||||||||||||||| ||||| Sbjct: 147475 gttggaatcaaatgcaaagatggaatcgtcct 147506
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 99.6 bits (50), Expect = 9e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 436 gaacccatgcctgtaaaggaattagctgatcgtgttgctagctatgttcatctgtgtaca 495 |||||||| ||||||| ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 41455 gaacccatttctgtaaaagaattggctgatcgtgtggctagctacgttcatctttgtaca 41514 Query: 496 ctctactggtggctcagg 513 |||||||||||||||||| Sbjct: 41515 ctctactggtggctcagg 41532 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||| || || Sbjct: 40642 atgagcagcataggcacaggatacgatctgtccgttaccaccttctctccggatggtcgc 40701 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcggg 228 ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 40702 gtcttccaggttgagtatgccacgaaggctgtcgacaacagcggg 40746 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 509 tcaggccttttggctgtggagttattcttggaggttacgata 550 ||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 41637 tcaggccttttggttgtggagttattcttggaggttatgata 41678 Score = 48.1 bits (24), Expect = 0.031 Identities = 60/72 (83%) Strand = Plus / Plus Query: 351 ggctgtggctgggttagcagcagacggtaggcagatagtctcaagagcaaagtcagaagc 410 |||||| ||||| ||||| ||||| || ||||| || || ||||||||||| || ||||| Sbjct: 41300 ggctgttgctggtttagctgcagatggcaggcaaattgtttcaagagcaaaatcggaagc 41359 Query: 411 agccaattatga 422 |||| |||||| Sbjct: 41360 ggccagttatga 41371 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 235 gttgggatcaaatgcaaagatggaattgtcct 266 ||||| |||||||||||||||||||| ||||| Sbjct: 40850 gttggaatcaaatgcaaagatggaatcgtcct 40881
>dbj|D78173.1| Spinacia oleracea mRNA for 26S proteasome alpha subunit, complete cds Length = 1099 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 451 aaggaattagctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctc 510 |||||| | ||||||||||||||||| ||||| ||| | || || ||||| ||||||||| Sbjct: 370 aaggaacttgctgatcgtgttgctagttatgtccatttatgcaccctctattggtggctc 429 Query: 511 aggccttttggctgtggagttattcttggaggtta 545 || |||||||| |||||||| |||||||||||||| Sbjct: 430 agaccttttggatgtggagtcattcttggaggtta 464 Score = 85.7 bits (43), Expect = 1e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 123 aatgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||| ||||| ||||| || || || || || ||||| |||||||| || ||||| || Sbjct: 42 aatgagcagcatcggaacaggctacgacctttcggtcactactttctcaccagacggtcg 101 Query: 183 tgtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggat 242 || || ||| ||||||| || | ||||||||| |||||||||||||| || || || Sbjct: 102 agtttttcagatcgagtacgccgccaaggccgttgacaacagcgggactgctgtaggcat 161 Query: 243 caaatgcaaagatggaattgtccttggtgtggagaagct 281 ||||||||| ||||||||||| || |||||||||||||| Sbjct: 162 caaatgcaaggatggaattgttctgggtgtggagaagct 200
>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete sequence Length = 99345 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 30333 atgagtagcattggaactgggtacgatctctccgtcaccactttctctcccgatggccgt 30274 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacag 224 || |||||| ||||||| || | || || ||||||||||| Sbjct: 30273 gttttccagatcgagtacgccgctaaagctgtcgacaacag 30233 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 511 aggccttttggctgtggagttattcttggaggttacgata 550 ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 29015 aggccttttggctgtggggttattcttggaggttatgata 28976 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 461 ctgatcgtgttgctagctatgttcatctgtgtacactctactggtggctcagg 513 |||| |||||||| || ||||| ||||||||||| || || |||||||||||| Sbjct: 29153 ctgagcgtgttgcaagttatgtacatctgtgtaccctgtattggtggctcagg 29101
>gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence Length = 1134 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 466 cgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttggctgt 525 ||||||||||| ||||| ||| | || || || || |||||||||||||||||||| ||| Sbjct: 447 cgtgttgctagttatgtgcatttatgcacgctgtattggtggctcaggccttttggatgt 506 Query: 526 ggagttattcttggagg 542 || || ||||||||||| Sbjct: 507 ggggtgattcttggagg 523 Score = 63.9 bits (32), Expect = 5e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 124 atgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggacggacgt 183 ||||||||||||||||| || |||||||| || || || || ||||| |||||||| | Sbjct: 105 atgagtagcataggaaccggatatgatctatcggtgacgacattctcgccggacggcaga 164 Query: 184 gtcttccaggtcgagtatgctggcaaggccgtcgacaacagcgggacgatcgttgggatc 243 || || ||| |||| || || || || || ||||| ||||| || || | ||||| ||| Sbjct: 165 gtatttcagatcgaatacgccggaaaagcagtcgataacagtggtactgttgttggaatc 224 Query: 244 aaatgcaaagatggaattgtccttggtgtggagaagctgataacctcaaagatgat 299 |||||||| |||||||| ||| | || ||||||||||| ||| |||| || ||||| Sbjct: 225 aaatgcaaggatggaatcgtcttgggagtggagaagctaatagcctccaaaatgat 280
>emb|AJ291738.1|NTA291738 Nicotiana tabacum mRNA for putative alpha7 proteasome subunit (a7 gene) Length = 1047 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 466 cgtgttgctagctatgttcatctgtgtacactctactggtggctcaggccttttggctgt 525 ||||||||||| ||||||||| | || ||||| || ||||||||||||||||| || ||| Sbjct: 433 cgtgttgctagttatgttcatttatgcacactttattggtggctcaggcctttcggatgt 492 Query: 526 gg 527 || Sbjct: 493 gg 494 Score = 46.1 bits (23), Expect = 0.12 Identities = 86/107 (80%) Strand = Plus / Plus Query: 118 ttaacaatgagtagcataggaactgggtatgatctgtccgtcaccactttctccccggac 177 |||| |||||| ||||||||||| || ||||| | ||||| || || ||||| |||||| Sbjct: 85 ttaaaaatgagcagcataggaacaggttatgacttatccgtgacgacattctcgccggac 144 Query: 178 ggacgtgtcttccaggtcgagtatgctggcaaggccgtcgacaacag 224 || | || || ||| |||| ||||| ||||| |||||||| ||||| Sbjct: 145 ggcagagtatttcagatcgaatatgccggcaaagccgtcgataacag 191
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 187 ttccaggtcgagtatgctggcaaggccgtcgacaacagc 225 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 46754 ttccaggtggagtacgccggcaaggctgtcgacaacagc 46716
>ref|XM_842880.1| Leishmania major strain Friedlin proteasome alpha 7 subunit (LMJ_0275) partial mRNA Length = 717 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 187 ttccaggtcgagtatgctggcaaggccgtcgacaacagc 225 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 64 ttccaggtggagtacgccggcaaggctgtcgacaacagc 102
>ref|XM_757288.1| Ustilago maydis 521 hypothetical protein (UM06234.1) partial mRNA Length = 918 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 166 ttctccccggacggacgtgtcttccaggtcgagtatgc 203 ||||||||||||||||| | | ||||||||||||||| Sbjct: 37 ttctccccggacggacggctgtaccaggtcgagtatgc 74
>emb|Z70232.1|HSU139A4 Human DNA sequence from clone LL0XNC01-139A4 on chromosome X, complete sequence Length = 34162 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 atagtctcaagagcaaagtcagaagc 410 ||||||||||||||||||||| |||| Sbjct: 9815 atagtctcaagagcaaagtcacaagc 9840
>gb|U85398.1|ACU85398 Acanthamoeba castellanii multicatalytic endopeptidase subunit C8 mRNA, partial cds Length = 898 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 187 ttccaggtcgagtatgctggcaaggccgtcgacaacag 224 ||||| || |||||||| | |||||||||||||||||| Sbjct: 59 ttccaagtggagtatgccgccaaggccgtcgacaacag 96
>gb|AC107710.5| Mus musculus chromosome 19, clone RP23-269K10, complete sequence Length = 188708 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 tggctgtggctgggttagcag 370 ||||||||||||||||||||| Sbjct: 51813 tggctgtggctgggttagcag 51833
>gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome 19, complete sequence Length = 170323 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 tggctgtggctgggttagcag 370 ||||||||||||||||||||| Sbjct: 52415 tggctgtggctgggttagcag 52395
>emb|CR722996.2|CNS0GKT6 Tetraodon nigroviridis full-length cDNA Length = 883 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 72 gggtatgacctgtcggcctccaccttctccccggacggacg 112
>emb|CR721663.2|CNS0GJS5 Tetraodon nigroviridis full-length cDNA Length = 887 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 77 gggtatgacctgtcggcctccaccttctccccggacggacg 117
>emb|CR706270.2|CNS0G7WQ Tetraodon nigroviridis full-length cDNA Length = 873 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 60 gggtatgacctgtcggcctccaccttctccccggacggacg 100
>emb|CR689985.2|CNS0FVCD Tetraodon nigroviridis full-length cDNA Length = 1464 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 82 gggtatgacctgtcggcctccaccttctccccggacggacg 122
>emb|CR684822.2|CNS0FRCY Tetraodon nigroviridis full-length cDNA Length = 1456 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 85 gggtatgacctgtcggcctccaccttctccccggacggacg 125
>emb|CR681330.2|CNS0FONY Tetraodon nigroviridis full-length cDNA Length = 902 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 91 gggtatgacctgtcggcctccaccttctccccggacggacg 131
>emb|CR680644.2|CNS0FO4W Tetraodon nigroviridis full-length cDNA Length = 888 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 77 gggtatgacctgtcggcctccaccttctccccggacggacg 117
>emb|CR673786.2|CNS0FIV4 Tetraodon nigroviridis full-length cDNA Length = 884 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 74 gggtatgacctgtcggcctccaccttctccccggacggacg 114
>emb|CR668419.2|CNS0FEQ1 Tetraodon nigroviridis full-length cDNA Length = 889 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 78 gggtatgacctgtcggcctccaccttctccccggacggacg 118
>emb|CR666902.2|CNS0FDJW Tetraodon nigroviridis full-length cDNA Length = 868 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 58 gggtatgacctgtcggcctccaccttctccccggacggacg 98
>emb|CR662254.2|CNS0F9YS Tetraodon nigroviridis full-length cDNA Length = 899 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 142 gggtatgatctgtccgtcaccactttctccccggacggacg 182 |||||||| ||||| | | |||| ||||||||||||||||| Sbjct: 89 gggtatgacctgtcggcctccaccttctccccggacggacg 129
>gb|AC159716.6| Mus musculus 6 BAC RP23-80P15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 239739 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 acaatgagtagcataggaactgggt 145 |||| |||||||||||||||||||| Sbjct: 197060 acaaggagtagcataggaactgggt 197084
>gb|AC152962.1| Mus musculus 6 BAC RP23-465F11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187047 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 acaatgagtagcataggaactgggt 145 |||| |||||||||||||||||||| Sbjct: 82008 acaaggagtagcataggaactgggt 82032
>ref|NM_126597.2| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.1 mRNA, complete cds Length = 1093 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 165 tttctccccggacggacgtgtcttccaggtcgagtatgct 204 |||||| ||||| || ||| ||||||| |||||||||||| Sbjct: 161 tttctcaccggaaggtcgtctcttccaagtcgagtatgct 200
>ref|NM_001036263.1| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.2 mRNA, complete cds Length = 1114 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 165 tttctccccggacggacgtgtcttccaggtcgagtatgct 204 |||||| ||||| || ||| ||||||| |||||||||||| Sbjct: 179 tttctcaccggaaggtcgtctcttccaagtcgagtatgct 218
>gb|DQ215433.1| Taeniopygia guttata clone 0058P0005A09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 933 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttgtccttggtgtggagaag 279 |||||||||||||||||||| Sbjct: 151 ttgtccttggtgtggagaag 170
>gb|DQ215431.1| Taeniopygia guttata clone 0058P0056A11 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttgtccttggtgtggagaag 279 |||||||||||||||||||| Sbjct: 165 ttgtccttggtgtggagaag 184
>gb|DQ215430.1| Taeniopygia guttata clone 0058P0018G09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttgtccttggtgtggagaag 279 |||||||||||||||||||| Sbjct: 178 ttgtccttggtgtggagaag 197
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 160 accactttctccccggacggacgtgtcttccaggtcgagtatgc 203 |||| |||||| | |||||| ||| | ||||||||||||||||| Sbjct: 94339 accattttctcactggacgggcgtctgttccaggtcgagtatgc 94382
>ref|XM_367205.1| Magnaporthe grisea 70-15 hypothetical protein (MG07130.4) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 166 ttctccccggacggacgtgtcttccaggtcga 197 ||||||||||| || ||| ||||||||||||| Sbjct: 43 ttctccccggaaggtcgtctcttccaggtcga 74
>gb|AY616011.1| Euprymna scolopes light organ C8 alpha proteasome subunit mRNA, complete cds Length = 1717 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 121 acaatgagtagcataggaactgggtatgatct 152 ||||||||| |||||||||||| |||||||| Sbjct: 102 acaatgagttccataggaactggatatgatct 133
>gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete sequence Length = 178233 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggtgtggagaagctgata 285 |||||||||||||||||||| Sbjct: 81677 ttggtgtggagaagctgata 81696
>ref|XM_844835.1| PREDICTED: Canis familiaris similar to ovary-specific acidic protein (LOC607964), mRNA Length = 1132 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tcaaatgcaaagatggaatt 261 |||||||||||||||||||| Sbjct: 997 tcaaatgcaaagatggaatt 978
>emb|CR956383.8| Pig DNA sequence from clone CH242-271L5 on chromosome 17, complete sequence Length = 163007 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 tctggcttggctgtggctgg 362 |||||||||||||||||||| Sbjct: 8361 tctggcttggctgtggctgg 8342
>gb|AC113124.9| Mus musculus chromosome 19, clone RP23-350M1, complete sequence Length = 216547 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 agcagccaattatgaaaagg 427 |||||||||||||||||||| Sbjct: 150462 agcagccaattatgaaaagg 150481
>gb|AY143829.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 741 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 165 tttctccccggacggacgtgtcttccaggtcgagtatgct 204 |||||| ||||| || ||| ||||||| |||||||||||| Sbjct: 45 tttctcaccggaaggtcgtctcttccaagtcgagtatgct 84
>ref|XM_784278.1| PREDICTED: Strongylocentrotus purpuratus similar to proteasome alpha 3 subunit isoform 2 (LOC584419), partial mRNA Length = 593 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 246 atgcaaagatggaattgtccttggtgtggagaagct 281 |||||||||||| |||| |||||||||||||||| Sbjct: 129 atgcaaagatggtgttgtatttggtgtggagaagct 164
>gb|AC163354.3| Mus musculus BAC clone RP23-49E21 from chromosome 12, complete sequence Length = 248060 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gaactctggcttggctgtgg 358 |||||||||||||||||||| Sbjct: 94233 gaactctggcttggctgtgg 94252
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 aaatgcaaagatggaattgt 263 |||||||||||||||||||| Sbjct: 13147 aaatgcaaagatggaattgt 13166
>dbj|AK163089.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530051K19 product:cytoplasmic polyadenylation element binding protein 3, full insert sequence Length = 5168 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 agcagccaattatgaaaagg 427 |||||||||||||||||||| Sbjct: 3175 agcagccaattatgaaaagg 3156
>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete sequence Length = 229443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tggctgtggagttattcttg 538 |||||||||||||||||||| Sbjct: 891 tggctgtggagttattcttg 872
>gb|AY052679.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 1014 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 165 tttctccccggacggacgtgtcttccaggtcgagtatgct 204 |||||| ||||| || ||| ||||||| |||||||||||| Sbjct: 104 tttctcaccggaaggtcgtctcttccaagtcgagtatgct 143
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ctggcttggctgtggctggg 363 |||||||||||||||||||| Sbjct: 36876 ctggcttggctgtggctggg 36857
>dbj|AK033860.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330103F08 product:unclassifiable, full insert sequence Length = 3242 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 agcagccaattatgaaaagg 427 |||||||||||||||||||| Sbjct: 1219 agcagccaattatgaaaagg 1200
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 tggtggctcaggccttttgg 521 |||||||||||||||||||| Sbjct: 1965056 tggtggctcaggccttttgg 1965037
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggtgtggagaagctgata 285 |||||||||||||||||||| Sbjct: 18667297 ttggtgtggagaagctgata 18667316 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 160 accactttctccccggacggacgtgtcttccaggtcgagtatgc 203 |||| |||||| | |||||| ||| | ||||||||||||||||| Sbjct: 11307981 accattttctcactggacgggcgtctgttccaggtcgagtatgc 11308024
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ctggcttggctgtggctggg 363 |||||||||||||||||||| Sbjct: 19409010 ctggcttggctgtggctggg 19408991
>dbj|AK105999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H10, full insert sequence Length = 1819 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggtgtggagaagctgata 285 |||||||||||||||||||| Sbjct: 483 ttggtgtggagaagctgata 502
>dbj|AK105736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H12, full insert sequence Length = 1810 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggtgtggagaagctgata 285 |||||||||||||||||||| Sbjct: 474 ttggtgtggagaagctgata 493
>dbj|AK099876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H14, full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 160 accactttctccccggacggacgtgtcttccaggtcgagtatgc 203 |||| |||||| | |||||| ||| | ||||||||||||||||| Sbjct: 751 accattttctcactggacgggcgtctgttccaggtcgagtatgc 794
>emb|CR376732.12| Zebrafish DNA sequence from clone DKEY-146H23 in linkage group 3, complete sequence Length = 171210 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tagctatgttcatctgtgta 493 |||||||||||||||||||| Sbjct: 64886 tagctatgttcatctgtgta 64867
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ctggcttggctgtggctggg 363 |||||||||||||||||||| Sbjct: 19420286 ctggcttggctgtggctggg 19420267
>gb|AF043519.1|AF043519 Arabidopsis thaliana 20S proteasome subunit PAA2 (PAA2) mRNA, complete cds Length = 1113 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 165 tttctccccggacggacgtgtcttccaggtcgagtatgct 204 |||||| ||||| || ||| ||||||| |||||||||||| Sbjct: 161 tttctcaccggaaggtcgtctcttccaagtcgagtatgct 200
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggtgtggagaagctgata 285 |||||||||||||||||||| Sbjct: 18826698 ttggtgtggagaagctgata 18826717 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 160 accactttctccccggacggacgtgtcttccaggtcgagtatgc 203 |||| |||||| | |||||| ||| | ||||||||||||||||| Sbjct: 11387170 accattttctcactggacgggcgtctgttccaggtcgagtatgc 11387213
>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete sequence Length = 234878 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tggctgtggagttattcttg 538 |||||||||||||||||||| Sbjct: 190687 tggctgtggagttattcttg 190668
>gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, complete sequence Length = 253440 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 aacctcaaagatgatacttg 304 |||||||||||||||||||| Sbjct: 95824 aacctcaaagatgatacttg 95805
>gb|AC120785.13| Mus musculus chromosome 8, clone RP23-336P3, complete sequence Length = 238405 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aacctcaaagatgatacttg 304 |||||||||||||||||||| Sbjct: 64083 aacctcaaagatgatacttg 64102 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,365,859 Number of Sequences: 3902068 Number of extensions: 4365859 Number of successful extensions: 71545 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71227 Number of HSP's gapped (non-prelim): 307 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
