ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart10e11 |
|---|---|
| Clone Library Name | barley_pub |
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 160 bits (405), Expect = 3e-39 Identities = 81/87 (93%), Positives = 85/87 (97%), Gaps = 1/87 (1%) Frame = +2 Query: 341 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 517 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 518 ITIGPLIVDALRPVTDLPLDVHLMIVE 598 ITIGPL+VDALRPVTDLPLDVHLMIVE Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVE 119
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 157 bits (396), Expect = 3e-38 Identities = 77/79 (97%), Positives = 79/79 (100%) Frame = +2 Query: 362 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIV 541 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIGPL+V Sbjct: 52 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVV 111 Query: 542 DALRPVTDLPLDVHLMIVE 598 DALRPVTDLPLDVHLMIVE Sbjct: 112 DALRPVTDLPLDVHLMIVE 130
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 153 bits (386), Expect = 4e-37 Identities = 73/80 (91%), Positives = 79/80 (98%) Frame = +2 Query: 359 ASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLI 538 +SRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPL+ Sbjct: 46 SSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLV 105 Query: 539 VDALRPVTDLPLDVHLMIVE 598 VD+LRP+TDLPLDVHLMIVE Sbjct: 106 VDSLRPITDLPLDVHLMIVE 125
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 115 bits (289), Expect = 7e-26 Identities = 54/70 (77%), Positives = 65/70 (92%) Frame = +2 Query: 389 DIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDL 568 +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPLIVDA+RP+T Sbjct: 3 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 62 Query: 569 PLDVHLMIVE 598 LDVHLMIVE Sbjct: 63 TLDVHLMIVE 72
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 106 bits (264), Expect = 6e-23 Identities = 52/69 (75%), Positives = 59/69 (85%) Frame = +2 Query: 392 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 571 I V+PSILSA+FA LG ++K VE G D IH+DVMDG FVPNITIGPLIV+A+RPVTDLP Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61 Query: 572 LDVHLMIVE 598 LDVHLMI E Sbjct: 62 LDVHLMIEE 70
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 92.4 bits (228), Expect = 9e-19 Identities = 40/71 (56%), Positives = 57/71 (80%) Frame = +2 Query: 380 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 559 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +VPN+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPL 71 Query: 560 TDLPLDVHLMI 592 +P+DVHLM+ Sbjct: 72 VSIPIDVHLMV 82
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 89.4 bits (220), Expect = 7e-18 Identities = 39/71 (54%), Positives = 56/71 (78%) Frame = +2 Query: 380 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 559 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +V N+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPL 71 Query: 560 TDLPLDVHLMI 592 +P+DVHLM+ Sbjct: 72 VSIPIDVHLMV 82
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 84.0 bits (206), Expect = 3e-16 Identities = 39/65 (60%), Positives = 51/65 (78%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 577 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G +V++L TD PLD Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLD 62 Query: 578 VHLMI 592 HLMI Sbjct: 63 CHLMI 67
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 84.0 bits (206), Expect = 3e-16 Identities = 38/66 (57%), Positives = 53/66 (80%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 574 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 575 DVHLMI 592 D HLMI Sbjct: 67 DCHLMI 72
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 84.0 bits (206), Expect = 3e-16 Identities = 38/66 (57%), Positives = 53/66 (80%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 574 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 575 DVHLMI 592 D HLMI Sbjct: 67 DCHLMI 72
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 83.6 bits (205), Expect = 4e-16 Identities = 38/67 (56%), Positives = 48/67 (71%) Frame = +2 Query: 392 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 571 I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTV 66 Query: 572 LDVHLMI 592 +DVHLMI Sbjct: 67 MDVHLMI 73
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 78.2 bits (191), Expect = 2e-14 Identities = 36/66 (54%), Positives = 51/66 (77%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 574 +++PSIL+A+FA+L ++ A VA DW+HVDVMDG FVPN+TIG +V +L +D+P+ Sbjct: 4 LIAPSILAADFARLTDE--AAVVASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPM 61 Query: 575 DVHLMI 592 D HLMI Sbjct: 62 DCHLMI 67
>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 233 Score = 78.2 bits (191), Expect = 2e-14 Identities = 36/76 (47%), Positives = 52/76 (68%) Frame = +2 Query: 365 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVD 544 R + K ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG FVPNIT GP +V Sbjct: 2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVA 61 Query: 545 ALRPVTDLPLDVHLMI 592 A+ T+L L+VH MI Sbjct: 62 AINRSTELFLEVHAMI 77
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 77.4 bits (189), Expect = 3e-14 Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 574 ++ SILSA+FA+LGE K AG DWIH DVMD +VPN+T+GP+I+ ALR +P+ Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPI 65 Query: 575 DVHLMI 592 DVHLM+ Sbjct: 66 DVHLMV 71
>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 76.6 bits (187), Expect = 5e-14 Identities = 35/70 (50%), Positives = 49/70 (70%) Frame = +2 Query: 383 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 562 + ++V PSI+ A+ LG + K +E AG D+IH+D+MDG FVPN+T GP I+ A+ T Sbjct: 4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRST 63 Query: 563 DLPLDVHLMI 592 DL L+VH MI Sbjct: 64 DLFLEVHAMI 73
>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 76.3 bits (186), Expect = 6e-14 Identities = 35/70 (50%), Positives = 50/70 (71%) Frame = +2 Query: 383 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 562 K ++++PSI+ A+ A LG+ + +E +G + IH+DVMDG FVPNIT GP I+ A+ T Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRST 62 Query: 563 DLPLDVHLMI 592 DL L+VH MI Sbjct: 63 DLFLEVHAMI 72
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 75.9 bits (185), Expect = 8e-14 Identities = 36/66 (54%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 574 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+I+++LR P+ Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65 Query: 575 DVHLMI 592 DVHLM+ Sbjct: 66 DVHLMV 71
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 75.5 bits (184), Expect = 1e-13 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 571 +++PSILSA+FA+LGE V AG D +H DVMD +VPN+TIGP++ +ALR P Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAP 64 Query: 572 LDVHLMI 592 +DVHLM+ Sbjct: 65 IDVHLMV 71
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 73.9 bits (180), Expect = 3e-13 Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 571 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 572 LDVHLMI 592 +DVHLM+ Sbjct: 65 IDVHLMV 71
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 73.9 bits (180), Expect = 3e-13 Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 571 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 572 LDVHLMI 592 +DVHLM+ Sbjct: 65 IDVHLMV 71
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 73.9 bits (180), Expect = 3e-13 Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 571 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 572 LDVHLMI 592 +DVHLM+ Sbjct: 65 IDVHLMV 71
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 73.9 bits (180), Expect = 3e-13 Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 571 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 572 LDVHLMI 592 +DVHLM+ Sbjct: 65 IDVHLMV 71
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 218 Score = 73.2 bits (178), Expect = 5e-13 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 577 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G ++ LR T LP D Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFD 66 Query: 578 VHLMI 592 VHLM+ Sbjct: 67 VHLMV 71
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 72.8 bits (177), Expect = 7e-13 Identities = 34/67 (50%), Positives = 49/67 (73%) Frame = +2 Query: 392 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 571 I + SILSA+F L E++K E AG D+ HVD+MDG FVPNI++G I ++ +T+LP Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP 61 Query: 572 LDVHLMI 592 ++VHLM+ Sbjct: 62 VEVHLMV 68
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 72.8 bits (177), Expect = 7e-13 Identities = 32/65 (49%), Positives = 53/65 (81%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 577 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP+I++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLD 60 Query: 578 VHLMI 592 VHLM+ Sbjct: 61 VHLMV 65
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 72.4 bits (176), Expect = 9e-13 Identities = 31/65 (47%), Positives = 53/65 (81%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 577 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP++++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLD 60 Query: 578 VHLMI 592 VHLM+ Sbjct: 61 VHLMV 65
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 71.6 bits (174), Expect = 2e-12 Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 571 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP + ALR P Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAP 64 Query: 572 LDVHLMI 592 +DVHLM+ Sbjct: 65 IDVHLMV 71
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 71.2 bits (173), Expect = 2e-12 Identities = 34/66 (51%), Positives = 46/66 (69%) Frame = +2 Query: 392 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 571 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPL+ ALRP T LP Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLP 64 Query: 572 LDVHLM 589 +DVHLM Sbjct: 65 IDVHLM 70
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 70.5 bits (171), Expect = 4e-12 Identities = 30/65 (46%), Positives = 45/65 (69%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 577 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG ++ +LR T LD Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68 Query: 578 VHLMI 592 HLM+ Sbjct: 69 CHLMV 73
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 69.7 bits (169), Expect = 6e-12 Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALR---PVTDL 568 ++PS+L+ +FA L ++V + G DW+HVDVMD +FVPN+TIGP++V A+R + Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEA 65 Query: 569 PLDVHLMIVE 598 D HLM++E Sbjct: 66 FFDCHLMVIE 75
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 68.2 bits (165), Expect = 2e-11 Identities = 33/61 (54%), Positives = 43/61 (70%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 574 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G IV +LR P Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 Query: 575 D 577 D Sbjct: 65 D 65
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 67.0 bits (162), Expect = 4e-11 Identities = 32/66 (48%), Positives = 45/66 (68%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 574 +++PSIL+ ++ +GEQ++A G D +H DVMDG FVPNIT G I+ +R LP+ Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPI 62 Query: 575 DVHLMI 592 D HLMI Sbjct: 63 DAHLMI 68
>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 67.0 bits (162), Expect = 4e-11 Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 3/68 (4%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV---TD 565 ++S S+LSANF++LGE + V +G D IH DVMD +V N+T GP+++++LR V Sbjct: 5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKS 64 Query: 566 LPLDVHLM 589 + +DVHLM Sbjct: 65 MVIDVHLM 72
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 66.6 bits (161), Expect = 5e-11 Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 11/79 (13%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV----- 559 I++PSIL+++FA L V AG +W+H+DVMDG FVPNIT+GP IV +LR Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVG 64 Query: 560 ---TDLP---LDVHLMIVE 598 +D P D H+M+ E Sbjct: 65 DKESDKPKAFFDCHMMVAE 83
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 64.7 bits (156), Expect = 2e-10 Identities = 29/53 (54%), Positives = 41/53 (77%) Frame = +2 Query: 395 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALR 553 I++PSIL+++FA LG + V +G +W+H+DVMDG FVPNIT+G IV +LR Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLR 57
>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)| Length = 231 Score = 62.4 bits (150), Expect = 1e-09 Identities = 25/65 (38%), Positives = 43/65 (66%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 577 +SPS++ + K EQ++ ++ + D+ H+D+MDG FVPN+T+ P V ++ + PLD Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLD 61 Query: 578 VHLMI 592 HLM+ Sbjct: 62 CHLMV 66
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 59.7 bits (143), Expect = 6e-09 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 571 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 572 LDVHLMI 592 D+H+M+ Sbjct: 67 FDMHMMV 73
>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-epimerase) Length = 228 Score = 59.7 bits (143), Expect = 6e-09 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 571 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 572 LDVHLMI 592 D+H+M+ Sbjct: 67 FDMHMMV 73
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 59.7 bits (143), Expect = 6e-09 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%) Frame = +2 Query: 398 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 571 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 572 LDVHLMI 592 D+H+M+ Sbjct: 67 FDMHMMV 73
>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 217 Score = 50.4 bits (119), Expect = 4e-06 Identities = 27/62 (43%), Positives = 37/62 (59%) Frame = +2 Query: 407 SILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHL 586 SIL NF L E++ ++ G IH+DVMD FV NIT GP I++ + D DVH+ Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHM 71 Query: 587 MI 592 M+ Sbjct: 72 MV 73
>SGCE_ECOLI (P39362) Protein sgcE (EC 5.1.3.-)| Length = 210 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +2 Query: 392 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 571 +I+ PS+ SAN G ++ A++ +H+D+ D F+ NIT G V A+ T P Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60 Query: 572 LDVHLMI 592 L H M+ Sbjct: 61 LSFHFML 67
>HIS4_RHORT (Q2RNA6) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 33.5 bits (75), Expect = 0.48 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 440 EQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDV 580 +Q A +AGC WIHV ++G F P V+A+ DLP+ + Sbjct: 34 DQAAAFALAGCRWIHVVDLNGAFAGRPVNAP-AVEAILAAVDLPVQL 79
>RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +2 Query: 359 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 496 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +2 Query: 359 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 496 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +2 Query: 5 GQRADNETGAVRLRLAPGDSPLLLPPTPPGRARVAPTHQIGPALP 139 G+ +G+ + APG P PP +A +APT P P Sbjct: 497 GEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAP 541
>LEU12_METAC (Q8THA5) 2-isopropylmalate synthase 2 (EC 2.3.3.13)| (Alpha-isopropylmalate synthase 2) (Alpha-IPM synthetase 2) Length = 515 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = +2 Query: 428 AKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVH 583 A L E KAV+ AGCD I+V G VP+ + I D +T +P+DVH Sbjct: 160 AYLIEVFKAVQEAGCDIINVPDTVGVMVPS-AMYRQIKDIAAEIT-IPIDVH 209
>HIS4_RHOS4 (P50936) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 239 Score = 29.3 bits (64), Expect = 9.0 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +2 Query: 443 QVKAVEVAGCDWIHVDVMDGRF 508 Q A E AGC+W+H+ ++G F Sbjct: 35 QAAAFEAAGCEWVHLVDLNGAF 56
>ICP47_CHV16 (Q7TLC4) ICP47 protein (Infected cell protein 47) (Immediate-early| protein IE12) (Immediate-early-5) (Vmw12) (US12 protein) Length = 78 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 14 ADNETGAVRLRLAPGDSPLLLPPT-PPGRARVAP 112 AD E +A D PLL PP+ PP R+R AP Sbjct: 34 ADEERREAAKAIAHPDRPLLAPPSAPPDRSRPAP 67
>NU4M_HIPAM (Q9ZZY2) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 459 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -1 Query: 565 ISHWTQSINN*WSNCDIWHKAPIHDINMNPVTSCHL 458 + +WTQ+++N WSN +W + + P+ HL Sbjct: 179 LQYWTQAVSNSWSNVFLWLACMMAFMVKMPLYGLHL 214
>TRIB3_MOUSE (Q8K4K2) Tribbles homolog 3 (TRB-3) (Neuronal cell death-inducible| putative kinase) Length = 354 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = +2 Query: 35 VRLRLAPGDSPLLLPPTPPGRA----RVAPTHQIGP 130 VR PG P LLPP+PP + VAP ++GP Sbjct: 35 VRDEPEPGPLPSLLPPSPPPASDLSPAVAPATRLGP 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,605,663 Number of Sequences: 219361 Number of extensions: 1310190 Number of successful extensions: 5708 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 5169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5634 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
