ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart10e01 |
|---|---|
| Clone Library Name | barley_pub |
>YCO6_SCHPO (O59797) Putative nucleosome assembly protein C364.06| Length = 393 Score = 70.1 bits (170), Expect = 3e-12 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 14/125 (11%) Frame = +1 Query: 166 VNALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQK 345 + A+ K+ SL L ++ + L V+ R+ LRG+Q ++ ++E++F +E LE Y K Sbjct: 50 LEAIDGKLGSLLHLTSEGVSELPEAVQRRISGLRGLQKRYSDLESQFQKELFELEKAYAK 109 Query: 346 LYEPLYAKR------------YDIXXXXXXXXXXXKEPTTENA--AEGGDSDAKGIPDFW 483 Y P++ +R +I KEPT+ + EGGD D KGIP+FW Sbjct: 110 KYAPIFKRRSEVVRGADEPTEEEIKKGEAADENEKKEPTSSESKKQEGGD-DTKGIPEFW 168 Query: 484 LTALK 498 LTA+K Sbjct: 169 LTAMK 173
>YB31_SCHPO (P78920) Putative nucleosome assembly protein C2D10.11C| Length = 379 Score = 69.3 bits (168), Expect = 6e-12 Identities = 35/111 (31%), Positives = 63/111 (56%) Frame = +1 Query: 163 LVNALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQ 342 +++ ++ ++ SL G + +ESL+P V+ R+ L+G+Q D I+ +F ++ LE KY+ Sbjct: 65 MLSMIEGRLSSLVGKSSGYIESLAPAVQNRITALKGLQKDCDAIQYEFRQKMLDLETKYE 124 Query: 343 KLYEPLYAKRYDIXXXXXXXXXXXKEPTTENAAEGGDSDAKGIPDFWLTAL 495 K Y+P++++R +I + E + D KGIP+FWLT L Sbjct: 125 KKYQPIFSRRAEIIKGVSEPVDDELD-HEEEIFQNNLPDPKGIPEFWLTCL 174
>NP1L1_MOUSE (P28656) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (Brain protein DN38) Length = 391 Score = 66.6 bits (161), Expect = 4e-11 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 24/141 (17%) Frame = +1 Query: 163 LVNALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQ 342 ++ AL++++ L +ESL V+ RV L+ +Q + +IEAKF+EE LE KY Sbjct: 48 ILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYA 107 Query: 343 KLYEPLYAKRYDIXXXXXXXXXXXKEPTTENAAEGGD----------------------- 453 LY+PL+ KR++I EPT E D Sbjct: 108 VLYQPLFDKRFEIINAIY-------EPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEE 160 Query: 454 -SDAKGIPDFWLTALKTNEVL 513 D KGIP+FWLT K ++L Sbjct: 161 KEDPKGIPEFWLTVFKNVDLL 181
>NP1L1_HUMAN (P55209) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (hNRP) Length = 391 Score = 65.9 bits (159), Expect = 6e-11 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 24/141 (17%) Frame = +1 Query: 163 LVNALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQ 342 ++ AL++++ L +ESL V+ RV L+ +Q + +IEAKF+EE LE KY Sbjct: 48 ILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYA 107 Query: 343 KLYEPLYAKRYDIXXXXXXXXXXXKEPTTENAAEGGD----------------------- 453 LY+PL+ KR++I EPT E D Sbjct: 108 VLYQPLFDKRFEIINAIY-------EPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEE 160 Query: 454 -SDAKGIPDFWLTALKTNEVL 513 D KGIP+FWLT K ++L Sbjct: 161 KEDPKGIPEFWLTVFKNVDLL 181
>NP1L1_RAT (Q9Z2G8) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) Length = 390 Score = 65.5 bits (158), Expect = 8e-11 Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 24/138 (17%) Frame = +1 Query: 163 LVNALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQ 342 ++ AL++++ L +ESL V+ RV L+ +Q + +IEAKF+EE LE KY Sbjct: 48 ILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYA 107 Query: 343 KLYEPLYAKRYDIXXXXXXXXXXXKEPTTENAAEGGD----------------------- 453 LY+PL+ KR++I EPT E D Sbjct: 108 VLYQPLFDKRFEIINAIY-------EPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEE 160 Query: 454 -SDAKGIPDFWLTALKTN 504 D KGIP+FWLT K + Sbjct: 161 KEDPKGIPEFWLTVFKND 178
>NP1L4_HUMAN (Q99733) Nucleosome assembly protein 1-like 4 (Nucleosome assembly| protein 2) (NAP2) Length = 375 Score = 62.4 bits (150), Expect = 7e-10 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 20/134 (14%) Frame = +1 Query: 172 ALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQKLY 351 AL++++ ++ + +E+L V+ R+ L+ +Q + IEAKF+EE LE KY LY Sbjct: 40 ALQERLDNVPHTPSSYIETLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALY 99 Query: 352 EPLYAKRYDIXXXXXXXXXXXKEPTTEN--------------------AAEGGDSDAKGI 471 +PL+ KR + E +EN AA + D KGI Sbjct: 100 QPLFDKRREFITGDVEPTDAESEWHSENEEEEKLAGDMKSKVVVTEKAAATAEEPDPKGI 159 Query: 472 PDFWLTALKTNEVL 513 P+FW T + ++L Sbjct: 160 PEFWFTIFRNVDML 173
>NAP1_YEAST (P25293) Nucleosome assembly protein| Length = 417 Score = 52.0 bits (123), Expect = 9e-07 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 24/136 (17%) Frame = +1 Query: 163 LVNALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQ 342 L+ +++D++ SL G + + L NV+ ++ L+ +QS+ E+E +F E LE K+ Sbjct: 66 LLQSIQDRLGSLVGQDSGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFL 125 Query: 343 KLYEPLYAKRYDIXXXXXXXXXXXKEPTTENAAEG---------------------GDSD 459 + Y+P++ +R I ++P E A+G DS+ Sbjct: 126 QKYKPIWEQRSRI-------ISGQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSE 178 Query: 460 ---AKGIPDFWLTALK 498 KGIP FWLTAL+ Sbjct: 179 EEQVKGIPSFWLTALE 194
>NP1L2_HUMAN (Q9ULW6) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 45.8 bits (107), Expect = 7e-05 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = +1 Query: 181 DKMQSLAG--LHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQKLYE 354 D+ + L G L D +ESL V+ RV L+ +Q++ +E+KF E +E K+ ++Y+ Sbjct: 86 DRPKGLIGYVLDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQ 145 Query: 355 PLYAKRYDIXXXXXXXXXXXKEPTTENAAEGGDSD 459 PL KR I EPT E DS+ Sbjct: 146 PLLEKRRQIINAIY-------EPTEEECEYKSDSE 173
>NP1L2_MOUSE (P51860) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 44.3 bits (103), Expect = 2e-04 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Frame = +1 Query: 181 DKMQSLAG--LHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQKLYE 354 D+ + L G L D +ESL V+ RV L+ +Q++ +E+KF E +E K+ ++Y+ Sbjct: 86 DRPKGLIGYLLDTDFVESLPVKVKCRVLALKKLQTRAAHLESKFLREFHDIERKFAEMYQ 145 Query: 355 PLYAKRYDIXXXXXXXXXXXKEPTTENAAEGGDSD 459 PL KR I EPT E D + Sbjct: 146 PLLEKRRQIINAVY-------EPTEEECEYKSDCE 173
>SET_DROME (P53997) Protein SET| Length = 269 Score = 32.0 bits (71), Expect = 1.0 Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 4/107 (3%) Frame = +1 Query: 184 KMQSLAGLHADALESLSP-NVRTRVEFLRGIQSQHDEIEA---KFFEERAALEAKYQKLY 351 K L G AD S + N E L I + +EI+A K EE +E KY KL Sbjct: 6 KRAKLDGAPADGNTSAAAGNNEEESEALEQIDACQNEIDALNEKASEEILKVEQKYNKLR 65 Query: 352 EPLYAKRYDIXXXXXXXXXXXKEPTTENAAEGGDSDAKGIPDFWLTA 492 +P Y KR ++ K IP+FW+T+ Sbjct: 66 KPCYEKRSEL--------------------------VKRIPNFWVTS 86
>GCSPA_STAAW (Q8NWC9) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 448 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = +1 Query: 178 KDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAALEAKY 339 K+K+ GLH AL+ L +TR EF L G + ++EA +E AA+ +Y Sbjct: 155 KNKIVVSKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQY 214 Query: 340 QKLY 351 Y Sbjct: 215 PNFY 218
>GCSPA_STAAN (P64218) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 448 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = +1 Query: 178 KDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAALEAKY 339 K+K+ GLH AL+ L +TR EF L G + ++EA +E AA+ +Y Sbjct: 155 KNKIVVSKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQY 214 Query: 340 QKLY 351 Y Sbjct: 215 PNFY 218
>GCSPA_STAAM (P64217) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 448 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = +1 Query: 178 KDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAALEAKY 339 K+K+ GLH AL+ L +TR EF L G + ++EA +E AA+ +Y Sbjct: 155 KNKIVVSKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQY 214 Query: 340 QKLY 351 Y Sbjct: 215 PNFY 218
>GCSPA_STAAC (Q5HFM3) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 448 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = +1 Query: 178 KDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAALEAKY 339 K+K+ GLH AL+ L +TR EF L G + ++EA +E AA+ +Y Sbjct: 155 KNKIVVSKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQY 214 Query: 340 QKLY 351 Y Sbjct: 215 PNFY 218
>GCSPA_STAAS (Q6G930) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 451 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = +1 Query: 178 KDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAALEAKY 339 K+K+ GLH AL+ L +TR EF L G + ++EA +E AA+ +Y Sbjct: 158 KNKIVVSKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQY 217 Query: 340 QKLY 351 Y Sbjct: 218 PNFY 221
>GCSPA_STAS1 (Q49XY0) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 450 Score = 31.2 bits (69), Expect = 1.7 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Frame = +1 Query: 178 KDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAALEAKY 339 K+K+ GLH AL+ L V+TR EF L G + +++E ++ AA+ +Y Sbjct: 155 KNKIVVSKGLHYQALQVLKTYVKTREEFEVVEVDLDGTITDLEKLENAIDDDTAAVAVQY 214 Query: 340 QKLY 351 Y Sbjct: 215 PNFY 218
>GCH2_SHEON (Q8EDD1) GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)| Length = 203 Score = 31.2 bits (69), Expect = 1.7 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 318 PFLKKLRLNLIMLALNAPQKLNARPDIGRERLERVGVQ 205 P L+K+ + + L N P+K+ A +IG E +ERV +Q Sbjct: 135 PMLEKIGVKHVRLMTNNPRKVKAMKEIGIEVVERVPLQ 172
>GCSPA_STAES (Q8CMM0) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 448 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Frame = +1 Query: 163 LVNALKDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAA 324 L + K+K+ +GLH AL+ L +TR EF L+G + +++E + AA Sbjct: 150 LSHTKKNKIVVSSGLHYQALQILHTYAKTRDEFEIIEVDLKGTITDLEKLEQLIDDNTAA 209 Query: 325 LEAKYQKLY 351 + +Y Y Sbjct: 210 VAVQYPNFY 218
>GCSPA_STAEQ (Q5HP13) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 448 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Frame = +1 Query: 163 LVNALKDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAA 324 L + K+K+ +GLH AL+ L +TR EF L+G + +++E + AA Sbjct: 150 LSHTKKNKIVVSSGLHYQALQILHTYAKTRDEFEIIEVDLKGTITDLEKLEQLIDDNTAA 209 Query: 325 LEAKYQKLY 351 + +Y Y Sbjct: 210 VAVQYPNFY 218
>RK16_PSEAK (Q3ZJ84) Chloroplast 50S ribosomal protein L16| Length = 137 Score = 30.8 bits (68), Expect = 2.3 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +1 Query: 418 EPTTENAAEGGDSDAKGIPDFWLTALKTNEVL 513 +P T AAE KG+P++W+ +K ++L Sbjct: 72 KPVTMRAAESRMGSGKGMPEYWVAVVKPGKIL 103
>YM92_CAEEL (P34531) Hypothetical protein M01A8.2 in chromosome III| Length = 937 Score = 30.4 bits (67), Expect = 3.0 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +1 Query: 166 VNALKDKMQSLAGLHADALESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAK 336 V +K+ Q + HA+A+ESL T+ I ++ E E F EERA EA+ Sbjct: 604 VEQMKNSNQQVIRNHANAVESLQKTHETQ------IAEKNKEFERNFEEERARREAE 654
>RK16_ANTFO (Q85C49) Chloroplast 50S ribosomal protein L16| Length = 136 Score = 30.4 bits (67), Expect = 3.0 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 418 EPTTENAAEGGDSDAKGIPDFWLTALKTNEVL 513 +P T AE KG P+FW++ +K N +L Sbjct: 72 KPVTMRPAETRMGSGKGSPEFWVSVVKPNRIL 103
>GCSPA_STAAR (Q6GGG3) Probable glycine dehydrogenase [decarboxylating] subunit 1| (EC 1.4.4.2) (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) Length = 451 Score = 30.4 bits (67), Expect = 3.0 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = +1 Query: 178 KDKMQSLAGLHADALESLSPNVRTRVEF------LRGIQSQHDEIEAKFFEERAALEAKY 339 K+K+ GLH AL+ L +TR EF L G + ++EA ++ AA+ +Y Sbjct: 158 KNKIVVSKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDDTAAVAVQY 217 Query: 340 QKLY 351 Y Sbjct: 218 PNFY 221
>RL16_GLOVI (Q7NEF9) 50S ribosomal protein L16| Length = 148 Score = 30.0 bits (66), Expect = 3.9 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 418 EPTTENAAEGGDSDAKGIPDFWLTALKTNEVL 513 +P T+ AAE KG P++W+ +K +L Sbjct: 72 KPVTQRAAETRMGSGKGAPEYWVCVVKPGRIL 103
>ENPP_BPT7 (P03803) Probable endopeptidase (EC 3.4.-.-)| Length = 143 Score = 30.0 bits (66), Expect = 3.9 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 8/91 (8%) Frame = +1 Query: 250 RVEFLRGIQSQHDEIEAKFFEERAALEAKYQKLYEPLYA--KRYDIXXXXXXXXXXXKEP 423 RVE + Q D + AK+ E+ AALE ++ L + KR + Sbjct: 44 RVEAAKSTQRAIDAVSAKYQEDLAALEGSTDRIISDLRSDNKRLRVRVKTTGTSDGQCGF 103 Query: 424 TTENAAEGGDSDAKGI------PDFWLTALK 498 + AE D DAK I D W+ AL+ Sbjct: 104 EPDGRAELDDRDAKRILAVTQKGDAWIRALQ 134
>RK16_CHAGL (Q8M9V1) Chloroplast 50S ribosomal protein L16| Length = 138 Score = 29.6 bits (65), Expect = 5.0 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 418 EPTTENAAEGGDSDAKGIPDFWLTALKTNEVL 513 +P T AAE KG P+FW+ +K +L Sbjct: 72 KPVTMRAAETRMGSGKGSPEFWVAVVKPGRIL 103
>RL16_THETN (Q8R7W1) 50S ribosomal protein L16| Length = 144 Score = 29.3 bits (64), Expect = 6.6 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 418 EPTTENAAEGGDSDAKGIPDFWLTALKTNEVL 513 +P T+ AE KG P+FW+ +K VL Sbjct: 72 KPVTKKPAETRMGSGKGSPEFWVAVVKPGRVL 103
>GCH2_PSESM (Q889Q3) GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)| Length = 205 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 318 PFLKKLRLNLIMLALNAPQKLNARPDIGRERLERVGVQTRQALH 187 P L+ L + + L N P+K+ A D+G ERV + T Q H Sbjct: 135 PMLQHLGVQSLRLMTNNPRKVKALTDMGINVAERVPLHTGQNPH 178
>NF2L1_MOUSE (Q61985) Nuclear factor erythroid 2-related factor 1 (NF-E2-related| factor 1) (NFE2-related factor 1) (Nuclear factor, erythroid derived 2, like 1) Length = 741 Score = 28.9 bits (63), Expect = 8.6 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Frame = +1 Query: 169 NALKDKMQSLAGLHADALESLSPN----VRTRVEFLRGIQSQHDEIEAKFFEERAALEAK 336 N K K+ ++ L D +E L + +R +VEFLR ++ ++++ + E L + Sbjct: 639 NCRKRKLDTILNLERD-VEDLQRDKARLLREKVEFLRSLRQMKQKVQSLYQEVFGRLRDE 697 Query: 337 YQKLYEP-LYAKRY 375 + + Y P YA +Y Sbjct: 698 HGRPYSPSQYALQY 711
>YAF3_SCHPO (Q09857) Hypothetical protein C29E6.03c in chromosome I| Length = 1044 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%) Frame = +1 Query: 220 LESLSPNVRTRVEF-LRGIQSQHDEIEAKFFEE 315 L S+SP+ R V F LR + S++DE+ +KF ++ Sbjct: 367 LSSISPSHRYSVAFFLRSLTSENDELSSKFLKQ 399
>RL16_CLOTE (Q890P5) 50S ribosomal protein L16| Length = 147 Score = 28.9 bits (63), Expect = 8.6 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 Query: 418 EPTTENAAEGGDSDAKGIPDFWLTALKTNEVL 513 +P T+ AE KG P++W+ +K VL Sbjct: 72 KPVTQKPAETRMGSGKGTPEYWVAVVKPGRVL 103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.132 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,973,478 Number of Sequences: 219361 Number of extensions: 768896 Number of successful extensions: 2195 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2184 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
