Clone Name | bart10e01 |
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Clone Library Name | barley_pub |
>dbj|AK071177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M16, full insert sequence Length = 1565 Score = 291 bits (147), Expect = 1e-75 Identities = 366/439 (83%) Strand = Plus / Plus Query: 74 gcggcgagaaggagaacatcgacctctccgacctcaacatctccctccctcccgccgccg 133 ||||||| ||||||||| |||||||||||||||||||| ||| || || ||||||||| Sbjct: 126 gcggcgacaaggagaacctcgacctctccgacctcaacgcctcgctgcccgccgccgccg 185 Query: 134 ccgccctcagcgccgaggaccgcgtcgacctcgtgaatgccctgaaggacaagatgcaga 193 |||| ||||||||||||||||||| || |||||| |||||||||||||| ||| |||||| Sbjct: 186 ccgctctcagcgccgaggaccgcgccggcctcgtcaatgccctgaaggataagctgcaga 245 Query: 194 gcttggcgggtctgcacgccgacgcgctcgagtcgctctcgcccaatgtcaggacgcgcg 253 |||||||||||| |||| | |||| ||| ||| ||||||| ||||||||||||| ||| | Sbjct: 246 gcttggcgggtcagcacacggacgtgcttgaggcgctctcccccaatgtcaggaagcgtg 305 Query: 254 ttgagtttctgaggggcattcagagccaacatgatgagattgaggcgaagttttttgagg 313 | || | | |||||| || ||| |||| |||||||| || ||| || || ||||| | Sbjct: 306 tcgaatatttgagggagatccagggccagcatgatgaaatcgagttaaaattctttgaag 365 Query: 314 aaagggccgctcttgaagccaagtaccagaagctgtatgaaccattgtatgctaagaggt 373 | || || || |||||||| |||||||||||||| |||||||| ||||| | ||||||| Sbjct: 366 agagagctgcgcttgaagcgaagtaccagaagctttatgaacccttgtacacaaagaggt 425 Query: 374 atgacattgtaaatggagttgtggaggttgatggcgttgttaaagaacctaccactgaaa 433 || |||| |||||||||||||| ||||||||||| | | | ||||| ||| ||||| Sbjct: 426 ataacatagtaaatggagttgttgaggttgatggtggaaatgacgaaccagccagtgaaa 485 Query: 434 atgctgcagaggggggtgattcagatgctaaaggaatcccagatttctggctcactgctt 493 ||||||| ||||| ||| |||||||||||||| |||||||||| ||||| |||||| Sbjct: 486 atgctgctgagggtaaagatgcagatgctaaaggagtcccagatttttggcttactgcta 545 Query: 494 tgaaaacaaatgaagtgct 512 ||||||||||||||||||| Sbjct: 546 tgaaaacaaatgaagtgct 564
>emb|AJ438611.1|OSA438611 Oryza sativa mRNA for nucleosome assembly protein 1 - like protein 1 Length = 1479 Score = 276 bits (139), Expect = 7e-71 Identities = 364/439 (82%) Strand = Plus / Plus Query: 74 gcggcgagaaggagaacatcgacctctccgacctcaacatctccctccctcccgccgccg 133 ||||||| ||||||||| |||||||||||||||||||| ||| || || ||||||||| Sbjct: 49 gcggcgacaaggagaacctcgacctctccgacctcaacgcctcgctgcccgccgccgccg 108 Query: 134 ccgccctcagcgccgaggaccgcgtcgacctcgtgaatgccctgaaggacaagatgcaga 193 |||| ||||||||||||||||||| || |||||| |||||||||||||| ||| |||||| Sbjct: 109 ccgctctcagcgccgaggaccgcgccggcctcgtcaatgccctgaaggataagctgcaga 168 Query: 194 gcttggcgggtctgcacgccgacgcgctcgagtcgctctcgcccaatgtcaggacgcgcg 253 |||||||||||| |||| | |||| ||| ||| ||||||| ||||||||||||| ||| | Sbjct: 169 gcttggcgggtcagcacacggacgtgcttgaggcgctctcccccaatgtcaggaagcgtg 228 Query: 254 ttgagtttctgaggggcattcagagccaacatgatgagattgaggcgaagttttttgagg 313 | || | | |||||| || ||| |||| |||||||| || ||| || || ||||| | Sbjct: 229 tcgaatatttgagggagatccagggccagcatgatgaaatcgagttaaaattctttgaag 288 Query: 314 aaagggccgctcttgaagccaagtaccagaagctgtatgaaccattgtatgctaagaggt 373 | || || || |||||||| |||||||||||||| |||||||| ||||| | ||||||| Sbjct: 289 agagagctgcgcttgaagcgaagtaccagaagctttatgaacccttgtacacaaagaggt 348 Query: 374 atgacattgtaaatggagttgtggaggttgatggcgttgttaaagaacctaccactgaaa 433 || |||| |||||||||||||| ||||||||||| | | | ||||| ||| ||||| Sbjct: 349 ataacatagtaaatggagttgttgaggttgatggtggaaatgacgaaccagccagtgaaa 408 Query: 434 atgctgcagaggggggtgattcagatgctaaaggaatcccagatttctggctcactgctt 493 ||||||| ||| ||| |||||||||||||| |||||||||| ||||| |||||| Sbjct: 409 atgctgctgagtttaaagatgcagatgctaaaggagtcccagatttttggcttactgcta 468 Query: 494 tgaaaacaaatgaagtgct 512 ||||||||||||||||||| Sbjct: 469 tgaaaacaaatgaagtgct 487
>gb|AY232823.1| Zea mays nucleosome/chromatin assembly factor group A (nfa101) mRNA, complete cds Length = 1327 Score = 198 bits (100), Expect = 1e-47 Identities = 256/308 (83%) Strand = Plus / Plus Query: 100 tccgacctcaacatctccctccctcccgccgccgccgccctcagcgccgaggaccgcgtc 159 |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||| | Sbjct: 32 tccgacctcaacgcctccctccccgcggccgctgcagccctcagcgccgaggaccgcgcc 91 Query: 160 gacctcgtgaatgccctgaaggacaagatgcagagcttggcgggtctgcacgccgacgcg 219 | |||||| |||||||| ||||| ||| |||||||| ||||||| | ||||||||| | | Sbjct: 92 ggcctcgtcaatgcccttaaggataagctgcagagcctggcgggccagcacgccgatgtg 151 Query: 220 ctcgagtcgctctcgcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagc 279 | ||| |||| ||||||||||| |||| ||| ||||||||| |||| | || ||||| Sbjct: 152 ttagagacgctgtcgcccaatgttaggaagcgggttgagtttttgagagagatccagagt 211 Query: 280 caacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagccaagtac 339 ||||| ||||| |||||||| ||||||||||| ||| | || || ||||| || |||||| Sbjct: 212 caacacgatgaaattgaggccaagttttttgaagaacgagctgcccttgaggcaaagtac 271 Query: 340 cagaagctgtatgaaccattgtatgctaagaggtatgacattgtaaatggagttgtggag 399 |||||||| |||||||| || || | |||||||||| ||||||||||||| |||||| Sbjct: 272 cagaagctttatgaacctttatacacaaagaggtatggaattgtaaatggagaagtggag 331 Query: 400 gttgatgg 407 || ||||| Sbjct: 332 gtagatgg 339
>gb|AY103996.1| Zea mays PCO067521 mRNA sequence Length = 1638 Score = 198 bits (100), Expect = 1e-47 Identities = 256/308 (83%) Strand = Plus / Plus Query: 100 tccgacctcaacatctccctccctcccgccgccgccgccctcagcgccgaggaccgcgtc 159 |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||| | Sbjct: 157 tccgacctcaacgcctccctccccgcggccgctgcagccctcagcgccgaggaccgcgcc 216 Query: 160 gacctcgtgaatgccctgaaggacaagatgcagagcttggcgggtctgcacgccgacgcg 219 | |||||| |||||||| ||||| ||| |||||||| ||||||| | ||||||||| | | Sbjct: 217 ggcctcgtcaatgcccttaaggataagctgcagagcctggcgggccagcacgccgatgtg 276 Query: 220 ctcgagtcgctctcgcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagc 279 | ||| |||| ||||||||||| |||| ||| ||||||||| |||| | || ||||| Sbjct: 277 ttagagacgctgtcgcccaatgttaggaagcgggttgagtttttgagagagatccagagt 336 Query: 280 caacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagccaagtac 339 ||||| ||||| |||||||| ||||||||||| ||| | || || ||||| || |||||| Sbjct: 337 caacacgatgaaattgaggccaagttttttgaagaacgagctgcccttgaggcaaagtac 396 Query: 340 cagaagctgtatgaaccattgtatgctaagaggtatgacattgtaaatggagttgtggag 399 |||||||| |||||||| || || | |||||||||| ||||||||||||| |||||| Sbjct: 397 cagaagctttatgaacctttatacacaaagaggtatggaattgtaaatggagaagtggag 456 Query: 400 gttgatgg 407 || ||||| Sbjct: 457 gtagatgg 464
>gb|BT016726.1| Zea mays clone Contig559 mRNA sequence Length = 1561 Score = 192 bits (97), Expect = 8e-46 Identities = 250/301 (83%) Strand = Plus / Plus Query: 100 tccgacctcaacatctccctccctcccgccgccgccgccctcagcgccgaggaccgcgtc 159 |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||| | Sbjct: 139 tccgacctcaacgcctccctccccgcggccgctgcagccctcagcgccgaggaccgcgcc 198 Query: 160 gacctcgtgaatgccctgaaggacaagatgcagagcttggcgggtctgcacgccgacgcg 219 | |||||| |||||||| ||||| ||| |||||||| ||||||| | ||||||||| | | Sbjct: 199 ggcctcgtcaatgcccttaaggataagctgcagagcctggcgggccagcacgccgatgtg 258 Query: 220 ctcgagtcgctctcgcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagc 279 | ||| |||| ||||||||||| |||| ||| ||||||||| |||| | || ||||| Sbjct: 259 ttagagacgctgtcgcccaatgttaggaagcgggttgagtttttgagagagatccagagt 318 Query: 280 caacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagccaagtac 339 ||||| ||||| |||||||| ||||||||||| ||| | || || ||||| || |||||| Sbjct: 319 caacacgatgaaattgaggccaagttttttgaagaacgagctgcccttgaggcaaagtac 378 Query: 340 cagaagctgtatgaaccattgtatgctaagaggtatgacattgtaaatggagttgtggag 399 |||||||| |||||||| || || | |||||||||| ||||||||||||| |||||| Sbjct: 379 cagaagctttatgaacctttatacacaaagaggtatggaattgtaaatggagaagtggag 438 Query: 400 g 400 | Sbjct: 439 g 439
>gb|BT013217.1| Lycopersicon esculentum clone 134428R, mRNA sequence Length = 1523 Score = 95.6 bits (48), Expect = 1e-16 Identities = 105/124 (84%) Strand = Plus / Plus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || || |||||||| ||||| ||||| || || |||| Sbjct: 351 ttcagagccaacatgatgaactggaagcaaagtttttcgaggagagggctgcactagaag 410 Query: 332 ccaagtaccagaagctgtatgaaccattgtatgctaagaggtatgacattgtaaatggag 391 | || ||||| ||||||||||||||||||||| | ||||| ||||| || |||||||| | Sbjct: 411 ctaaataccaaaagctgtatgaaccattgtattcaaagagatatgaaatagtaaatgggg 470 Query: 392 ttgt 395 |||| Sbjct: 471 ttgt 474
>emb|AJ438615.1|NTA438615 Nicotiana tabacum mRNA for nucleosome assembly protein 1 - like protein 3 Length = 1566 Score = 93.7 bits (47), Expect = 5e-16 Identities = 128/155 (82%) Strand = Plus / Plus Query: 253 gttgagtttctgaggggcattcagagccaacatgatgagattgaggcgaagttttttgag 312 |||||| |||| |||| ||||||| ||||||||||| | ||||| |||||||||||| Sbjct: 293 gttgaggttcttagggagattcagactcaacatgatgaattggaggcaaagttttttgag 352 Query: 313 gaaagggccgctcttgaagccaagtaccagaagctgtatgaaccattgtatgctaagagg 372 || || || || |||||||||||||||||||||| |||| | || | ||||| ||||| Sbjct: 353 gagagagcagcccttgaagccaagtaccagaagcagtatcagcccctttatgcaaagaga 412 Query: 373 tatgacattgtaaatggagttgtggaggttgatgg 407 | ||| ||||| ||||||||||| || |||||||| Sbjct: 413 tctgaaattgttaatggagttgttgaagttgatgg 447
>gb|AY496136.1| Capsicum annuum induced stolon tip protein NAP1Ps mRNA, partial cds Length = 681 Score = 73.8 bits (37), Expect = 5e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 235 cccaatgtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagatt 294 ||||||||||| | ||| ||||| ||||||| | ||||||| || |||||||| | Sbjct: 188 cccaatgtcagaaagcgtgttgaagttctgagagagattcagactcagcatgatgaattg 247 Query: 295 gaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatgaa 354 ||||| || ||||||||||| || || || ||||||||||| ||||| ||| ||||| | Sbjct: 248 gaggccaaattttttgaggagagagctgcgcttgaagccaaataccaaaagttgtatcag 307 Query: 355 ccattgtatgctaagaggtatgacattgtaaatggagttgt 395 || |||||| | ||||||| ||| ||||| ||||||||||| Sbjct: 308 cctttgtatacgaagaggtttgatattgtgaatggagttgt 348
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 460 gctaaaggaatcccagatttctggctcactgctttgaaaacaaatgaagtgct 512 ||||||||| |||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 2559616 gctaaaggagtcccagatttttggcttactgctatgaaaacaaatgaagtgct 2559668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 179 aggacaagatgcagagcttggcgggtctgcacgccgacgcgctcgagtcgctctcgccca 238 |||| ||| |||||||||||||||||| |||| | |||| ||| ||| ||||||| |||| Sbjct: 2557431 aggataagctgcagagcttggcgggtcagcacacggacgtgcttgaggcgctctccccca 2557490 Query: 239 atgtcagga 247 ||||||||| Sbjct: 2557491 atgtcagga 2557499 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 130 gccgccgccctcagcgccgaggaccgcgtcgacctcgtgaatgccctgaagg 181 ||||| || ||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 2557265 gccgcagctctcagcgccgaggaccgcgccggcctcgtcaatgccctgaagg 2557316 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 74 gcggcgagaaggagaacatcgacctctccgacctcaacatctccctccctcccgccgccg 133 ||||||| ||||||||| |||||||||||||||||||| ||| || || ||||||||| Sbjct: 2557131 gcggcgacaaggagaacctcgacctctccgacctcaacgcctcgctgcccgccgccgccg 2557190 Query: 134 ccg 136 ||| Sbjct: 2557191 ccg 2557193 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 368 agaggtatgacattgtaaatggagttgtggaggttgatgg 407 |||||||| |||| |||||||||||||| ||||||||||| Sbjct: 2559448 agaggtataacatagtaaatggagttgttgaggttgatgg 2559487 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || | |||||| || ||||||| || ||||| |||| Sbjct: 24008089 ttcagagccaacatgatgaactagaagtgaagttcttcgaggaaaaagctgctctagaag 24008030 Query: 332 ccaagtaccagaagctgtatgaaccattgta 362 | || || |||||||| |||| ||||||||| Sbjct: 24008029 ctaaatatcagaagctttatggaccattgta 24007999 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 325 cttgaagccaagtaccagaagctgtatgaaccattgta 362 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 2559307 cttgaagcgaagtaccagaagctttatgaacccttgta 2559344 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ctccctccctcccgccgccg 133 |||||||||||||||||||| Sbjct: 27096876 ctccctccctcccgccgccg 27096895 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ggcggcgcggcgagaaggag 87 |||||||||||||||||||| Sbjct: 17161274 ggcggcgcggcgagaaggag 17161255 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 tccctcccgccgccgccgcc 138 |||||||||||||||||||| Sbjct: 8832740 tccctcccgccgccgccgcc 8832759
>dbj|AP003632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624B04 Length = 72745 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 460 gctaaaggaatcccagatttctggctcactgctttgaaaacaaatgaagtgct 512 ||||||||| |||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 58818 gctaaaggagtcccagatttttggcttactgctatgaaaacaaatgaagtgct 58870 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 179 aggacaagatgcagagcttggcgggtctgcacgccgacgcgctcgagtcgctctcgccca 238 |||| ||| |||||||||||||||||| |||| | |||| ||| ||| ||||||| |||| Sbjct: 56633 aggataagctgcagagcttggcgggtcagcacacggacgtgcttgaggcgctctccccca 56692 Query: 239 atgtcagga 247 ||||||||| Sbjct: 56693 atgtcagga 56701 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 130 gccgccgccctcagcgccgaggaccgcgtcgacctcgtgaatgccctgaagg 181 ||||| || ||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 56467 gccgcagctctcagcgccgaggaccgcgccggcctcgtcaatgccctgaagg 56518 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 74 gcggcgagaaggagaacatcgacctctccgacctcaacatctccctccctcccgccgccg 133 ||||||| ||||||||| |||||||||||||||||||| ||| || || ||||||||| Sbjct: 56333 gcggcgacaaggagaacctcgacctctccgacctcaacgcctcgctgcccgccgccgccg 56392 Query: 134 ccg 136 ||| Sbjct: 56393 ccg 56395 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 368 agaggtatgacattgtaaatggagttgtggaggttgatgg 407 |||||||| |||| |||||||||||||| ||||||||||| Sbjct: 58650 agaggtataacatagtaaatggagttgttgaggttgatgg 58689 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 325 cttgaagccaagtaccagaagctgtatgaaccattgta 362 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 58509 cttgaagcgaagtaccagaagctttatgaacccttgta 58546
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 460 gctaaaggaatcccagatttctggctcactgctttgaaaacaaatgaagtgct 512 ||||||||| |||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 14957 gctaaaggagtcccagatttttggcttactgctatgaaaacaaatgaagtgct 15009 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 179 aggacaagatgcagagcttggcgggtctgcacgccgacgcgctcgagtcgctctcgccca 238 |||| ||| |||||||||||||||||| |||| | |||| ||| ||| ||||||| |||| Sbjct: 12772 aggataagctgcagagcttggcgggtcagcacacggacgtgcttgaggcgctctccccca 12831 Query: 239 atgtcagga 247 ||||||||| Sbjct: 12832 atgtcagga 12840 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 130 gccgccgccctcagcgccgaggaccgcgtcgacctcgtgaatgccctgaagg 181 ||||| || ||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 12606 gccgcagctctcagcgccgaggaccgcgccggcctcgtcaatgccctgaagg 12657 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 74 gcggcgagaaggagaacatcgacctctccgacctcaacatctccctccctcccgccgccg 133 ||||||| ||||||||| |||||||||||||||||||| ||| || || ||||||||| Sbjct: 12472 gcggcgacaaggagaacctcgacctctccgacctcaacgcctcgctgcccgccgccgccg 12531 Query: 134 ccg 136 ||| Sbjct: 12532 ccg 12534 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 368 agaggtatgacattgtaaatggagttgtggaggttgatgg 407 |||||||| |||| |||||||||||||| ||||||||||| Sbjct: 14789 agaggtataacatagtaaatggagttgttgaggttgatgg 14828 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 325 cttgaagccaagtaccagaagctgtatgaaccattgta 362 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 14648 cttgaagcgaagtaccagaagctttatgaacccttgta 14685
>ref|XM_475795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 234 gcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagat 293 |||||| ||||||| |||||| ||| | || |||| || ||||||||||| ||||| | Sbjct: 162 gcccaaggtcaggaagcgcgtggaggtgcttagggagatccagagccaacacgatgatct 221 Query: 294 tgaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatga 353 ||||||||||| |||||||| || || || |||||||| || || |||||| ||||||| Sbjct: 222 agaggcgaagttctttgaggagagagctgcacttgaagctaaatatcagaagatgtatga 281 Query: 354 acca 357 |||| Sbjct: 282 acca 285
>emb|AJ438612.1|OSA438612 Oryza sativa mRNA for nucleosome assembly protein 1 - like protein 2 Length = 1553 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 234 gcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagat 293 |||||| ||||||| |||||| ||| | || |||| || ||||||||||| ||||| | Sbjct: 280 gcccaaggtcaggaagcgcgtggaggtgcttagggagatccagagccaacacgatgatct 339 Query: 294 tgaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatga 353 ||||||||||| |||||||| || || || |||||||| || || |||||| ||||||| Sbjct: 340 agaggcgaagttctttgaggagagagctgcacttgaagctaaatatcagaagatgtatga 399 Query: 354 acca 357 |||| Sbjct: 400 acca 403
>dbj|AK105671.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A05, full insert sequence Length = 1568 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 234 gcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagat 293 |||||| ||||||| |||||| ||| | || |||| || ||||||||||| ||||| | Sbjct: 303 gcccaaggtcaggaagcgcgtggaggtgcttagggagatccagagccaacacgatgatct 362 Query: 294 tgaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatga 353 ||||||||||| |||||||| || || || |||||||| || || |||||| ||||||| Sbjct: 363 agaggcgaagttctttgaggagagagctgcacttgaagctaaatatcagaagatgtatga 422 Query: 354 acca 357 |||| Sbjct: 423 acca 426
>dbj|AK071120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081N13, full insert sequence Length = 1489 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 234 gcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagat 293 |||||| ||||||| |||||| ||| | || |||| || ||||||||||| ||||| | Sbjct: 312 gcccaaggtcaggaagcgcgtggaggtgcttagggagatccagagccaacacgatgatct 371 Query: 294 tgaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatga 353 ||||||||||| |||||||| || || || |||||||| || || |||||| ||||||| Sbjct: 372 agaggcgaagttctttgaggagagagctgcacttgaagctaaatatcagaagatgtatga 431 Query: 354 acca 357 |||| Sbjct: 432 acca 435
>gb|BT013575.1| Lycopersicon esculentum clone 132318R, mRNA sequence Length = 2545 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 235 cccaatgtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagatt 294 |||| |||||||| ||| |||||| |||| |||| ||||||| |||||||| || | Sbjct: 284 cccattgtcaggatgcgtgttgaggttctcagggagattcagactcaacatgacgatttg 343 Query: 295 gaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatgaa 354 ||||| || |||||||| || || || || ||||||||||| ||||||||||| ||| || Sbjct: 344 gaggcaaaattttttgaagagagagctgcacttgaagccaaataccagaagctttatcaa 403 Query: 355 ccatt 359 ||||| Sbjct: 404 ccatt 408
>gb|AY100480.1| Zea mays nucleosome/chromatin assembly factor group A (nfa102) mRNA, complete cds Length = 1291 Score = 63.9 bits (32), Expect = 5e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 234 gcccaatgtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagat 293 |||||| ||||||| |||||||||| || |||| || ||| || |||| ||||| | Sbjct: 209 gcccaaggtcaggaagcgcgttgagaagctcagggagatccagggcgaacacgatgaact 268 Query: 294 tgaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatga 353 ||||||||||||||| || || || || ||||| ||||| ||||| |||||| ||||||| Sbjct: 269 tgaggcgaagtttttcgaagagagagctgctctagaagctaagtatcagaagttgtatga 328 Query: 354 acca 357 |||| Sbjct: 329 acca 332
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 274 cagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagcc 333 ||||||||||| ||||| | ||||||||||| |||||||| || || || |||||||| Sbjct: 117912 cagagccaacacgatgatctagaggcgaagttctttgaggagagagctgcacttgaagct 117853 Query: 334 aagtaccagaagctgtatgaacca 357 || || |||||| ||||||||||| Sbjct: 117852 aaatatcagaagatgtatgaacca 117829
>ref|NM_191710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 271 attcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaa 330 |||||||||||||||||||| | || |||||||| || ||||||| || ||||| ||| Sbjct: 148 attcagagccaacatgatgaactagaagcgaagttcttggaggaaaaagctgctctagaa 207 Query: 331 gccaagtaccagaagctgtatgaaccattgta 362 || || || |||||||| |||| ||||||||| Sbjct: 208 gctaattatcagaagctttatggaccattgta 239
>emb|AJ438616.1|NTA438616 Nicotiana tabacum mRNA for nucleosome assembly protein 1 - like protein 4 Length = 1533 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 304 ttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtatgaaccattgtat 363 ||||| ||||| ||||| || || ||||| || |||||||||||||||||||| || ||| Sbjct: 306 tttttcgaggagagggctgcactggaagctaaataccagaagctgtatgaacctttatat 365 Query: 364 gctaagaggtatgacattgtaaatggagttgt 395 | ||||| ||||| || |||||||| ||||| Sbjct: 366 acaaagagatatgaaatagtaaatggggttgt 397
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 274 cagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagcc 333 ||||||||||| ||||| | ||||||||||| |||||||| || || || |||||||| Sbjct: 26604437 cagagccaacacgatgatctagaggcgaagttctttgaggagagagctgcacttgaagct 26604378 Query: 334 aagtaccagaagctgtatgaacca 357 || || |||||| ||||||||||| Sbjct: 26604377 aaatatcagaagatgtatgaacca 26604354 Score = 44.1 bits (22), Expect = 0.44 Identities = 73/90 (81%) Strand = Plus / Plus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || |||||||| || ||| ||| || ||||| |||| Sbjct: 8201300 ttcagagccaacatgatgaactagaagcgaagttcttcgagtaaaaagctgctctagaag 8201359 Query: 332 ccaagtaccagaagctgtatgaaccattgt 361 | || || ||| |||| |||| |||||||| Sbjct: 8201360 ctaaatatcagtagctttatggaccattgt 8201389 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 ccgccgccgccgccctcagcgccg 148 |||||||||||||| ||||||||| Sbjct: 9279312 ccgccgccgccgccatcagcgccg 9279335
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || |||||||| || ||||||| || ||||| |||| Sbjct: 29575599 ttcagagccaacatgatgaactagaagcgaagttcttggaggaaaaagctgctctagaag 29575540 Query: 332 ccaagtaccagaagctgtatgaaccattgta 362 | || || |||||||| |||| ||||||||| Sbjct: 29575539 ctaattatcagaagctttatggaccattgta 29575509 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 cactcccctcggcggcgcggcga 80 ||||||||||||||||||||||| Sbjct: 34194885 cactcccctcggcggcgcggcga 34194907 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 ctccctcccgccgccgccgcc 138 ||||||||||||||||||||| Sbjct: 7275552 ctccctcccgccgccgccgcc 7275532 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgccgccc 139 ||||||| |||||||||||||||| Sbjct: 37443274 ccctcccgcccgccgccgccgccc 37443251
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || |||||||| || ||||||| || ||||| |||| Sbjct: 45419 ttcagagccaacatgatgaactagaagcgaagttcttggaggaaaaagctgctctagaag 45360 Query: 332 ccaagtaccagaagctgtatgaaccattgta 362 | || || |||||||| |||| ||||||||| Sbjct: 45359 ctaattatcagaagctttatggaccattgta 45329
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || |||||||| || ||||||| || ||||| |||| Sbjct: 141873 ttcagagccaacatgatgaactagaagcgaagttcttggaggaaaaagctgctctagaag 141814 Query: 332 ccaagtaccagaagctgtatgaaccattgta 362 | || || |||||||| |||| ||||||||| Sbjct: 141813 ctaattatcagaagctttatggaccattgta 141783
>gb|AC138526.23| Medicago truncatula clone mth2-17n24, complete sequence Length = 124531 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 281 aacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagccaagtacc 340 |||||||||| | ||||| |||||||| ||||| || || |||||||||||||| |||| Sbjct: 58375 aacatgatgaattggaggctaagtttttggaggagagagcagctcttgaagccaaatacc 58434 Query: 341 agaagctgtatgaaccattgta 362 | || ||||| |||||||||| Sbjct: 58435 aaaaattgtatcaaccattgta 58456 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 296 aggcgaagttttttgaggaaagggccgctcttgaagccaagtacca 341 |||| |||||||||||||| || || |||||||||||||| ||||| Sbjct: 38031 aggcaaagttttttgaggagagagcagctcttgaagccaaatacca 38076 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 301 aagttttttgaggaaagggccgctcttgaagccaagtacca 341 |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 43351 aagtttttggaggagagagcagctcttgaagccaaatacca 43391
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || | |||||| || ||||||| || ||||| |||| Sbjct: 137700 ttcagagccaacatgatgaactagaagtgaagttcttcgaggaaaaagctgctctagaag 137641 Query: 332 ccaagtaccagaagctgtatgaaccattgta 362 | || || |||||||| |||| ||||||||| Sbjct: 137640 ctaaatatcagaagctttatggaccattgta 137610
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || | |||||| || ||||||| || ||||| |||| Sbjct: 17782 ttcagagccaacatgatgaactagaagtgaagttcttcgaggaaaaagctgctctagaag 17723 Query: 332 ccaagtaccagaagctgtatgaaccattgta 362 | || || |||||||| |||| ||||||||| Sbjct: 17722 ctaaatatcagaagctttatggaccattgta 17692
>ref|NM_127506.3| Arabidopsis thaliana DNA binding AT2G19480 mRNA, complete cds Length = 1575 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 241 gtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagattgaggcg 300 ||||||| ||| || |||||||| || | ||||||| |||| |||||||||| || || Sbjct: 296 gtcaggaagcgtgtcgagtttctaagagagattcagaaccaatatgatgagatggaagca 355 Query: 301 aagttttttgaggaaagggccgctcttgaagccaagta 338 || || |||||||| || || ||||||||||| ||||| Sbjct: 356 aaattctttgaggagagagcagctcttgaagctaagta 393
>gb|AY099771.1| Arabidopsis thaliana putative nucleosome assembly protein (At2g19480) mRNA, complete cds Length = 1447 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 241 gtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagattgaggcg 300 ||||||| ||| || |||||||| || | ||||||| |||| |||||||||| || || Sbjct: 220 gtcaggaagcgtgtcgagtttctaagagagattcagaaccaatatgatgagatggaagca 279 Query: 301 aagttttttgaggaaagggccgctcttgaagccaagta 338 || || |||||||| || || ||||||||||| ||||| Sbjct: 280 aaattctttgaggagagagcagctcttgaagctaagta 317
>gb|BT002602.1| Arabidopsis thaliana putative nucleosome assembly protein (At2g19480) mRNA, complete cds Length = 1268 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 241 gtcaggacgcgcgttgagtttctgaggggcattcagagccaacatgatgagattgaggcg 300 ||||||| ||| || |||||||| || | ||||||| |||| |||||||||| || || Sbjct: 151 gtcaggaagcgtgtcgagtttctaagagagattcagaaccaatatgatgagatggaagca 210 Query: 301 aagttttttgaggaaagggccgctcttgaagccaagta 338 || || |||||||| || || ||||||||||| ||||| Sbjct: 211 aaattctttgaggagagagcagctcttgaagctaagta 248
>gb|U81289.1|PSU81289 Pisum sativum NAP1Ps mRNA, complete cds Length = 1597 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 281 aacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagccaagtacc 340 |||||||||| | ||||| |||||||| || || || || |||||||||||||| |||| Sbjct: 309 aacatgatgaattggaggcaaagtttttggaagagagagctgctcttgaagccaaatacc 368 Query: 341 agaagctgtatgaaccattgtatgctaagaggtatgacattgtaaatggagttg 394 | | ||||| |||||||||| ||||| | ||||| ||||| ||||| |||| Sbjct: 369 aaattttgtatcaaccattgtacactaagcgttatgatattgtgaatggtgttg 422
>gb|BT016661.1| Zea mays clone Contig494 mRNA sequence Length = 1404 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 114 ctccctccctcccgccgccgccgcc 138 ||||||||||||||||||||||||| Sbjct: 39 ctccctccctcccgccgccgccgcc 63
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 67 cggcggcgcggcgagaaggagaaca 91 ||||||||||||||||||||||||| Sbjct: 1727278 cggcggcgcggcgagaaggagaaca 1727302 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 tccctcccgccgccgccgccc 139 ||||||||||||||||||||| Sbjct: 8164310 tccctcccgccgccgccgccc 8164290 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgcc 135 |||||||||||||||||||| Sbjct: 35020617 ccctccctcccgccgccgcc 35020598
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 67 cggcggcgcggcgagaaggagaaca 91 ||||||||||||||||||||||||| Sbjct: 45290 cggcggcgcggcgagaaggagaaca 45314
>gb|AY830122.1| Oryza sativa (indica cultivar-group) nucleosome assembly protein 1-like protein 3 mRNA, complete cds Length = 906 Score = 48.1 bits (24), Expect = 0.028 Identities = 75/92 (81%) Strand = Plus / Plus Query: 271 attcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaa 330 |||||||||||||||||||| | || |||||||| || ||||||| | ||||| ||| Sbjct: 148 attcagagccaacatgatgaactagaagcgaagttcttggaggaaaaatctgctctagaa 207 Query: 331 gccaagtaccagaagctgtatgaaccattgta 362 || || || || ||||| |||| ||||||||| Sbjct: 208 gctaaatatcataagctttatggaccattgta 239
>gb|AC153606.3| Mus musculus 6 BAC RP23-252F12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203410 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgccgccc 139 |||||||||||||||||||||||| Sbjct: 166194 ccctccctcccgccgccgccgccc 166171
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier, hypothetical protein, putative NAM protein, putative cis-zeatin O-glucosyltransferases, putative small nuclear ribonucleoprotein, putative cis-zeatin O-glucosyltransferase, putative glutathione peroxidase, putative copper-exporting ATPases, putative serine/threonine dehydratase, and putative actin depolymerizing factor genes, complete cds; and hypothetical protein gene, partial cds Length = 157237 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 115 tccctccctcccgccgccgccgcc 138 |||||||||||||||||||||||| Sbjct: 144024 tccctccctcccgccgccgccgcc 144047
>gb|L38856.1|SOYSNAP Glycine max nucleosome assembly protein 1 (SNAP-1) mRNA, complete cds Length = 1442 Score = 48.1 bits (24), Expect = 0.028 Identities = 57/68 (83%) Strand = Plus / Plus Query: 322 gctcttgaagccaagtaccagaagctgtatgaaccattgtatgctaagaggtatgacatt 381 ||||||||||| |||||||| || |||||| | |||||||| | ||| | ||||| ||| Sbjct: 307 gctcttgaagcaaagtaccaaaaactgtatcagccattgtacacaaagcgctatgaaatt 366 Query: 382 gtaaatgg 389 |||||||| Sbjct: 367 gtaaatgg 374
>ref|XM_481632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1990 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 ccctccctcccgccgccgccgcc 138 ||||||||||||||||||||||| Sbjct: 50 ccctccctcccgccgccgccgcc 72
>gb|DQ214015.1| Taeniopygia guttata clone 0063P0029B04 myelin protein zero-like 1 variant 1-like mRNA, complete sequence Length = 1024 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 126 cgccgccgccgccctcagcgccg 148 ||||||||||||||||||||||| Sbjct: 75 cgccgccgccgccctcagcgccg 97
>ref|NM_190991.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 858 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 cactcccctcggcggcgcggcga 80 ||||||||||||||||||||||| Sbjct: 72 cactcccctcggcggcgcggcga 94
>ref|NM_005655.1| Homo sapiens Kruppel-like factor 10 (KLF10), transcript variant 1, mRNA Length = 2899 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 122 ctcccgccgccgccgccctcagcgccg 148 |||||||||||||||| |||||||||| Sbjct: 31 ctcccgccgccgccgcgctcagcgccg 5
>gb|AY022674.1| Oryza sativa microsatellite MRG4999 containing (CCG)X8, closest to marker R2466, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 ccctccctcccgccgccgccgcc 138 ||||||||||||||||||||||| Sbjct: 92 ccctccctcccgccgccgccgcc 114
>gb|BC095399.1| Homo sapiens Kruppel-like factor 10, mRNA (cDNA clone MGC:110869 IMAGE:30520399), complete cds Length = 2950 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 122 ctcccgccgccgccgccctcagcgccg 148 |||||||||||||||| |||||||||| Sbjct: 30 ctcccgccgccgccgcgctcagcgccg 4
>emb|CR861403.1| Pongo pygmaeus mRNA; cDNA DKFZp459O142 (from clone DKFZp459O142) Length = 2945 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 122 ctcccgccgccgccgccctcagcgccg 148 |||||||||||||||| |||||||||| Sbjct: 35 ctcccgccgccgccgcgctcagcgccg 9
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgcc 147 ||||||||||||||||||||||| Sbjct: 5829599 ccgccgccgccgccctcagcgcc 5829577 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccc 139 |||||||||||||||||||| Sbjct: 20924869 ccctcccgccgccgccgccc 20924888
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 ccctccctcccgccgccgccgcc 138 ||||||||||||||||||||||| Sbjct: 14349786 ccctccctcccgccgccgccgcc 14349808 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 2427782 cctccctcccgccgccgccgcc 2427761
>dbj|AP003073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702B09 Length = 172541 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 cactcccctcggcggcgcggcga 80 ||||||||||||||||||||||| Sbjct: 30571 cactcccctcggcggcgcggcga 30593
>dbj|AB107035.1| Hylobates syndactylus gene for dopamine receptor D4, partial cds Length = 302 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 126 ccctcccgccgccgccgccctca 148
>dbj|AB107034.1| Hylobates syndactylus gene for dopamine receptor D4, partial cds Length = 310 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 134 ccctcccgccgccgccgccctca 156
>dbj|AB107032.1| Hylobates syndactylus gene for dopamine receptor D4, partial cds Length = 318 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 142 ccctcccgccgccgccgccctca 164
>dbj|AB107031.1| Hylobates agilis gene for dopamine receptor D4, partial cds Length = 302 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 126 ccctcccgccgccgccgccctca 148
>dbj|AB107029.1| Pongo pygmaeus gene for dopamine receptor D4, partial cds Length = 302 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 126 ccctcccgccgccgccgccctca 148
>dbj|AB107028.1| Pongo pygmaeus gene for dopamine receptor D4, partial cds Length = 309 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 133 ccctcccgccgccgccgccctca 155
>dbj|AB107027.1| Gorilla gorilla gene for dopamine receptor D4, partial cds Length = 318 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 142 ccctcccgccgccgccgccctca 164
>dbj|AB107026.1| Pan paniscus gene for dopamine receptor D4, partial cds Length = 302 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 126 ccctcccgccgccgccgccctca 148
>dbj|AB107025.1| Pan paniscus gene for dopamine receptor D4, partial cds Length = 302 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 126 ccctcccgccgccgccgccctca 148
>dbj|AB107024.1| Pan paniscus gene for dopamine receptor D4, partial cds Length = 310 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccctca 142 ||||||||||||||||||||||| Sbjct: 134 ccctcccgccgccgccgccctca 156
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_A10 Length = 101249 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 ccctccctcccgccgccgccgcc 138 ||||||||||||||||||||||| Sbjct: 52866 ccctccctcccgccgccgccgcc 52888
>dbj|AK065219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002G12, full insert sequence Length = 1989 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 ccctccctcccgccgccgccgcc 138 ||||||||||||||||||||||| Sbjct: 49 ccctccctcccgccgccgccgcc 71
>gb|AC005726.1|AC005726 Homo sapiens chromosome 17, clone hRPK.192_H_23, complete sequence Length = 185215 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgccgcc 138 ||||||||||||||||||||||| Sbjct: 12873 ccctccctcccgccgccgccgcc 12851
>dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1042C11 Length = 200610 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 ctcccgccgccgccgccctcagcgccg 148 |||||||||||||||| |||||||||| Sbjct: 132835 ctcccgccgccgccgcgctcagcgccg 132861
>gb|AF050110.1|AF050110 Homo sapiens TGFb inducible early protein and early growth response protein alpha genes, complete cds Length = 8456 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 122 ctcccgccgccgccgccctcagcgccg 148 |||||||||||||||| |||||||||| Sbjct: 1559 ctcccgccgccgccgcgctcagcgccg 1533
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgcc 147 ||||||||||||||||||||||| Sbjct: 5829592 ccgccgccgccgccctcagcgcc 5829570 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccc 139 |||||||||||||||||||| Sbjct: 20851083 ccctcccgccgccgccgccc 20851102
>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 169662 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgcc 147 ||||||||||||||||||||||| Sbjct: 25244 ccgccgccgccgccctcagcgcc 25222
>ref|XM_480056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1410 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 270 cctccctcccgccgccgccgcc 249
>ref|NM_197395.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0018B10.18), mRNA Length = 867 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 360 cctccctcccgccgccgccgcc 339
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 117 cctccctcccgccgccgccgccctcagcgc 146 |||| |||||||||||||||||||| |||| Sbjct: 1311640 cctcgctcccgccgccgccgccctccgcgc 1311669
>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24, complete sequence Length = 146492 Score = 44.1 bits (22), Expect = 0.44 Identities = 73/90 (81%) Strand = Plus / Plus Query: 272 ttcagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaag 331 ||||||||||||||||||| | || |||||||| || ||| ||| || ||||| |||| Sbjct: 123533 ttcagagccaacatgatgaactagaagcgaagttcttcgagtaaaaagctgctctagaag 123592 Query: 332 ccaagtaccagaagctgtatgaaccattgt 361 | || || ||| |||| |||| |||||||| Sbjct: 123593 ctaaatatcagtagctttatggaccattgt 123622
>gb|BC021207.2| Homo sapiens atonal homolog 8 (Drosophila), mRNA (cDNA clone MGC:13121 IMAGE:4109799), complete cds Length = 2455 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 127 gccgccgccgccctcagcgccgagga 152 ||||||||||| |||||||||||||| Sbjct: 254 gccgccgccgcgctcagcgccgagga 229
>ref|NM_032827.3| Homo sapiens atonal homolog 8 (Drosophila) (ATOH8), mRNA Length = 2455 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 127 gccgccgccgccctcagcgccgagga 152 ||||||||||| |||||||||||||| Sbjct: 254 gccgccgccgcgctcagcgccgagga 229
>emb|AJ851657.1| Gallus gallus mRNA for hypothetical protein, clone 15g18 Length = 3885 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 89 cctccctcccgccgccgccgcc 110
>gb|BC094832.1| Homo sapiens atonal homolog 8 (Drosophila), mRNA (cDNA clone MGC:104829 IMAGE:6292270), complete cds Length = 2227 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 127 gccgccgccgccctcagcgccgagga 152 ||||||||||| |||||||||||||| Sbjct: 33 gccgccgccgcgctcagcgccgagga 8
>dbj|AK074681.1| Homo sapiens cDNA FLJ90200 fis, clone MAMMA1001615, weakly similar to NEUROGENIC DIFFERENTIATION FACTOR 1 Length = 2434 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 127 gccgccgccgccctcagcgccgagga 152 ||||||||||| |||||||||||||| Sbjct: 255 gccgccgccgcgctcagcgccgagga 230
>dbj|AK027614.1| Homo sapiens cDNA FLJ14708 fis, clone NT2RP3000603, weakly similar to NEUROGENIC DIFFERENTIATION FACTOR 1 Length = 2405 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 127 gccgccgccgccctcagcgccgagga 152 ||||||||||| |||||||||||||| Sbjct: 156 gccgccgccgcgctcagcgccgagga 131
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 86144 cctccctcccgccgccgccgcc 86123
>gb|AC012454.8| Homo sapiens BAC clone RP11-439L14 from 2, complete sequence Length = 185512 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 127 gccgccgccgccctcagcgccgagga 152 ||||||||||| |||||||||||||| Sbjct: 146317 gccgccgccgcgctcagcgccgagga 146292
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 19628953 cctccctcccgccgccgccgcc 19628932 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 ctccctcccgccgccgccgcc 138 ||||||||||||||||||||| Sbjct: 17359685 ctccctcccgccgccgccgcc 17359705
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 132 cgccgccctcagcgccgaggaccgcgtcga 161 ||||||||||| ||||||| |||||||||| Sbjct: 5947507 cgccgccctcaccgccgagcaccgcgtcga 5947478
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 103752 cctccctcccgccgccgccgcc 103731
>dbj|AK073681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054K18, full insert sequence Length = 1411 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 271 cctccctcccgccgccgccgcc 250
>ref|XM_572140.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 2099 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 117 cctccctcccgccgccgccgccctcagcgc 146 |||| |||||||||||||||||||| |||| Sbjct: 519 cctcgctcccgccgccgccgccctccgcgc 548
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccgcc 138 |||||||||||||||||||||| Sbjct: 19640229 cctccctcccgccgccgccgcc 19640208 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 ctccctcccgccgccgccgcc 138 ||||||||||||||||||||| Sbjct: 17368725 ctccctcccgccgccgccgcc 17368745
>gb|BC106143.1| Mus musculus Y box protein 1, mRNA (cDNA clone MGC:118070 IMAGE:4024261), complete cds Length = 1268 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 93 ccgccgccgccctcagcgccg 113
>ref|NM_188620.1| Oryza sativa (japonica cultivar-group), Ozsa8223 predicted mRNA Length = 1329 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 ctccctcccgccgccgccgcc 138 ||||||||||||||||||||| Sbjct: 476 ctccctcccgccgccgccgcc 456
>ref|XM_510011.1| PREDICTED: Pan troglodytes similar to DNA-binding protein B (LOC452975), mRNA Length = 1347 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 508 cccgccgcccccgccctcagcgccg 532
>ref|NM_001031318.1| Gallus gallus DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) (DCUN1D1), mRNA Length = 3562 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 ccgccgccgccgccctcagcg 145 ||||||||||||||||||||| Sbjct: 12 ccgccgccgccgccctcagcg 32
>gb|BC106045.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:117250 IMAGE:6062615), complete cds Length = 1515 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>ref|XM_525693.1| PREDICTED: Pan troglodytes similar to DNA-binding protein B (LOC470311), mRNA Length = 1530 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 598 cccgccgcccccgccctcagcgccg 622
>ref|XM_514314.1| PREDICTED: Pan troglodytes similar to DNA-binding protein B (LOC457868), mRNA Length = 1059 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 466 cccgccgcccccgccctcagcgccg 490
>ref|XM_513367.1| PREDICTED: Pan troglodytes similar to DNA-binding protein B (LOC456810), mRNA Length = 780 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 241 cccgccgcccccgccctcagcgccg 265
>ref|XM_470710.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 |||||||||||||||||| |||||| Sbjct: 1252 cccgccgccgccgccctctgcgccg 1276
>ref|NM_004559.2| Homo sapiens Y box binding protein 1 (YBX1), mRNA Length = 1554 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 156 cccgccgcccccgccctcagcgccg 180
>ref|NM_031563.3| Rattus norvegicus Y box protein 1 (Ybx1), mRNA Length = 1536 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 164 ccgccgccgccctcagcgccg 184
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 cccgccgccgccgccctcagcgccg 148 |||||||||||||||||| |||||| Sbjct: 14674765 cccgccgccgccgccctctgcgccg 14674741 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tccctcccgccgccgccgcc 138 |||||||||||||||||||| Sbjct: 35919107 tccctcccgccgccgccgcc 35919088
>ref|XM_913775.2| PREDICTED: Mus musculus similar to Nuclease sensitive element-binding protein 1 (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB)... (LOC637948), mRNA Length = 1208 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 165 ccgccgccgccctcagcgccg 185
>gb|BC029747.1| Mus musculus Y box protein 1, mRNA (cDNA clone MGC:27812 IMAGE:3481736), complete cds Length = 1327 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 152 ccgccgccgccctcagcgccg 172
>emb|CR788303.14| Zebrafish DNA sequence from clone DKEY-178E17 in linkage group 8, complete sequence Length = 175313 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 420 acctaccactgaaaatgctgcagag 444 |||||| |||||||||||||||||| Sbjct: 140496 acctacaactgaaaatgctgcagag 140520
>ref|XM_843567.1| PREDICTED: Canis familiaris similar to nuclease sensitive element binding protein 1 (LOC607025), mRNA Length = 1720 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 370 cccgccgcccccgccctcagcgccg 394
>gb|BC103637.1| Rattus norvegicus nuclease sensitive element binding protein 1, mRNA (cDNA clone MGC:124971 IMAGE:7107271), complete cds Length = 1535 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 158 ccgccgccgccctcagcgccg 178
>gb|BC098672.1| Rattus norvegicus nuclease sensitive element binding protein 1, mRNA (cDNA clone MGC:112628 IMAGE:7124218), complete cds Length = 1536 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 164 ccgccgccgccctcagcgccg 184
>gb|BC072486.1| Rattus norvegicus nuclease sensitive element binding protein 1, mRNA (cDNA clone MGC:91399 IMAGE:7105037), complete cds Length = 1590 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 164 ccgccgccgccctcagcgccg 184
>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5, complete sequence Length = 190731 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 420 acctaccactgaaaatgctgcagag 444 |||||| |||||||||||||||||| Sbjct: 165541 acctacaactgaaaatgctgcagag 165565
>ref|NM_011732.1| Mus musculus Y box protein 1 (Ybx1), mRNA Length = 1161 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 69 ccgccgccgccctcagcgccg 89
>gb|AC073073.2| Homo sapiens BAC clone RP11-251G23 from 7, complete sequence Length = 114414 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 53792 cccgccgcccccgccctcagcgccg 53768
>ref|XM_851016.1| PREDICTED: Canis familiaris similar to nuclease sensitive element binding protein 1, transcript variant 5 (LOC479011), mRNA Length = 1547 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 170 cccgccgcccccgccctcagcgccg 194
>ref|XM_850973.1| PREDICTED: Canis familiaris similar to nuclease sensitive element binding protein 1, transcript variant 4 (LOC479011), mRNA Length = 1511 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 170 cccgccgcccccgccctcagcgccg 194
>ref|XM_850900.1| PREDICTED: Canis familiaris similar to nuclease sensitive element binding protein 1, transcript variant 2 (LOC479011), mRNA Length = 1472 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 159 cccgccgcccccgccctcagcgccg 183
>ref|XM_843278.1| PREDICTED: Canis familiaris similar to nuclease sensitive element binding protein 1, transcript variant 1 (LOC479011), mRNA Length = 1172 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 170 cccgccgcccccgccctcagcgccg 194
>gb|BC070084.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:87414 IMAGE:5272578), complete cds Length = 1574 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 181 cccgccgcccccgccctcagcgccg 205
>gb|BC098435.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:104858 IMAGE:4859074), complete cds Length = 1475 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 172 cccgccgcccccgccctcagcgccg 196
>gb|BC090038.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:110976 IMAGE:6526492), complete cds Length = 1513 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 166 cccgccgcccccgccctcagcgccg 190
>gb|BC071708.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:87995 IMAGE:4361396), complete cds Length = 1599 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 166 cccgccgcccccgccctcagcgccg 190
>gb|BC072014.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone IMAGE:5556363), partial cds Length = 922 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 166 cccgccgcccccgccctcagcgccg 190
>gb|BC061634.1| Mus musculus Y box protein 1, mRNA (cDNA clone MGC:68144 IMAGE:6530605), complete cds Length = 1559 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 162 ccgccgccgccctcagcgccg 182
>gb|BC015208.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:17203 IMAGE:3914485), complete cds Length = 1454 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 106 cccgccgcccccgccctcagcgccg 130
>gb|BC065571.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:75111 IMAGE:6171221), complete cds Length = 1529 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 181 cccgccgcccccgccctcagcgccg 205
>gb|BC010430.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:15819 IMAGE:3506647), complete cds Length = 1554 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 156 cccgccgcccccgccctcagcgccg 180
>gb|BC049977.1| Mus musculus Y box protein 1, mRNA (cDNA clone MGC:58972 IMAGE:4922840), complete cds Length = 1340 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 165 ccgccgccgccctcagcgccg 185
>gb|BC000064.2| Homo sapiens Y box binding protein 1, mRNA (cDNA clone IMAGE:3510030), partial cds Length = 917 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 161 cccgccgcccccgccctcagcgccg 185
>gb|BC031472.1| Mus musculus Y box protein 1, mRNA (cDNA clone MGC:25376 IMAGE:4167717), complete cds Length = 1562 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 176 ccgccgccgccctcagcgccg 196
>gb|BC013450.1| Mus musculus Y box protein 1, mRNA (cDNA clone MGC:18505 IMAGE:4215685), complete cds Length = 1407 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 168 ccgccgccgccctcagcgccg 188
>gb|BC018393.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone IMAGE:3882730), containing frame-shift errors Length = 899 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 141 cccgccgcccccgccctcagcgccg 165
>gb|BC013620.1| Mus musculus Y box protein 1, mRNA (cDNA clone MGC:11498 IMAGE:3968068), complete cds Length = 1334 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 159 ccgccgccgccctcagcgccg 179
>gb|BC038384.1| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:5173 IMAGE:3449398), complete cds Length = 1521 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 163 cccgccgcccccgccctcagcgccg 187
>emb|AL354950.8| Human DNA sequence from clone RP11-234G16 on chromosome 10 Contains the EBF3 gene for early B-cell factor 3, a novel gene and two CpG islands, complete sequence Length = 166022 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cctcccgccgccgccgccctc 141 ||||||||||||||||||||| Sbjct: 151971 cctcccgccgccgccgccctc 151991
>gb|AY340485.1| Homo sapiens biliverdin reductase B (flavin reductase (NADPH)) (BLVRB) gene, complete cds Length = 20922 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 114 ctccctccctcccgccgccgccgccctcagcgc 146 ||||||| ||| |||||||||||| |||||||| Sbjct: 445 ctccctctctcgcgccgccgccgcgctcagcgc 477
>emb|AL034346.31|HS668J24 Human DNA sequence from clone RP4-668J24 on chromosome 6p25.1-25.3 Contians the FOXF2 gene for forkhead box F2, complete sequence Length = 120429 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccctccctcccgccgccgccgccc 139 |||||||||||||||||||| |||| Sbjct: 27056 tccctccctcccgccgccgcagccc 27080
>emb|X57621.1|MMYB1 M.musculus YB-1 mRNA Length = 1161 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 69 ccgccgccgccctcagcgccg 89
>emb|AJ719993.1| Gallus gallus mRNA for hypothetical protein, clone 9c8 Length = 3562 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 ccgccgccgccgccctcagcg 145 ||||||||||||||||||||| Sbjct: 12 ccgccgccgccgccctcagcg 32
>emb|AJ438614.1|NTA438614 Nicotiana tabacum mRNA for nucleosome assembly protein 1 - like protein 2 Length = 1475 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 295 gaggcgaagttttttgaggaaagggccgctcttgaagccaagtaccagaagctgtat 351 ||||| || |||||||| || || || || ||||||||||| ||||||||| ||||| Sbjct: 252 gaggcaaaattttttgaagagagagctgcacttgaagccaaataccagaagttgtat 308
>gb|AC020929.6| Homo sapiens chromosome 19 clone CTD-2223D2, complete sequence Length = 119569 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 114 ctccctccctcccgccgccgccgccctcagcgc 146 ||||||| ||| |||||||||||| |||||||| Sbjct: 3620 ctccctctctcgcgccgccgccgcgctcagcgc 3588
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 ctccctcccgccgccgccgcc 138 ||||||||||||||||||||| Sbjct: 12594 ctccctcccgccgccgccgcc 12574
>dbj|AB254829.1| Xenopus laevis SCC2-2 mRNA for Scc2-2B, complete cds Length = 9857 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgccg 136 ||||||||||||||||||||| Sbjct: 424 ccctccctcccgccgccgccg 404
>dbj|AB254828.1| Xenopus laevis SCC2-2 mRNA for Scc2-2A, complete cds Length = 9918 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgccg 136 ||||||||||||||||||||| Sbjct: 424 ccctccctcccgccgccgccg 404
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 ctgaaggacaagatgcagagcttgg 199 |||||||||||| |||||||||||| Sbjct: 4475882 ctgaaggacaagctgcagagcttgg 4475906
>emb|CR626307.1| full-length cDNA clone CS0DI039YB07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1483 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 148 cccgccgcccccgccctcagcgccg 172
>emb|CR626201.1| full-length cDNA clone CS0DH007YO07 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1593 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 208 cccgccgcccccgccctcagcgccg 232
>emb|CR625314.1| full-length cDNA clone CS0DH007YC09 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1504 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR623505.1| full-length cDNA clone CS0DG002YA12 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1488 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR622381.1| full-length cDNA clone CS0DJ010YJ12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1475 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 166 cccgccgcccccgccctcagcgccg 190
>emb|CR621880.1| full-length cDNA clone CS0DE002YF21 of Placenta of Homo sapiens (human) Length = 1375 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 162 cccgccgcccccgccctcagcgccg 186
>emb|CR620766.1| full-length cDNA clone CS0DH003YL13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1471 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 154 cccgccgcccccgccctcagcgccg 178
>emb|CR619575.1| full-length cDNA clone CS0DF012YN14 of Fetal brain of Homo sapiens (human) Length = 1487 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR619134.1| full-length cDNA clone CS0DF023YA21 of Fetal brain of Homo sapiens (human) Length = 1453 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 156 cccgccgcccccgccctcagcgccg 180
>emb|CR618356.1| full-length cDNA clone CS0DB001YL20 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1459 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR617386.1| full-length cDNA clone CS0DH003YH19 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1483 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 164 cccgccgcccccgccctcagcgccg 188
>emb|CR617108.1| full-length cDNA clone CS0DE011YA14 of Placenta of Homo sapiens (human) Length = 1484 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 156 cccgccgcccccgccctcagcgccg 180
>emb|CR616907.1| full-length cDNA clone CL0BB023ZF11 of Neuroblastoma of Homo sapiens (human) Length = 1482 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 156 cccgccgcccccgccctcagcgccg 180
>emb|CR614365.1| full-length cDNA clone CS0DF024YE17 of Fetal brain of Homo sapiens (human) Length = 1495 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR614014.1| full-length cDNA clone CS0DE006YA11 of Placenta of Homo sapiens (human) Length = 1503 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR613748.1| full-length cDNA clone CS0DA003YD08 of Neuroblastoma of Homo sapiens (human) Length = 1480 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR613480.1| full-length cDNA clone CS0DM004YL23 of Fetal liver of Homo sapiens (human) Length = 1434 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 102 cccgccgcccccgccctcagcgccg 126
>emb|CR609077.1| full-length cDNA clone CS0DG004YB04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1477 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR608918.1| full-length cDNA clone CS0DM013YH17 of Fetal liver of Homo sapiens (human) Length = 1409 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 155 cccgccgcccccgccctcagcgccg 179
>emb|CR607838.1| full-length cDNA clone CS0DB007YO06 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1473 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR607423.1| full-length cDNA clone CS0DH003YF19 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1463 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 162 cccgccgcccccgccctcagcgccg 186
>emb|CR604753.1| full-length cDNA clone CS0DF018YJ11 of Fetal brain of Homo sapiens (human) Length = 1490 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 162 cccgccgcccccgccctcagcgccg 186
>emb|CR606326.1| full-length cDNA clone CS0DM004YB22 of Fetal liver of Homo sapiens (human) Length = 1481 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 162 cccgccgcccccgccctcagcgccg 186
>emb|CR605858.1| full-length cDNA clone CS0DA002YK22 of Neuroblastoma of Homo sapiens (human) Length = 1501 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR603903.1| full-length cDNA clone CS0DK002YF15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1476 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR603575.1| full-length cDNA clone CS0DF021YF14 of Fetal brain of Homo sapiens (human) Length = 1507 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR603229.1| full-length cDNA clone CS0DF026YA14 of Fetal brain of Homo sapiens (human) Length = 1439 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 161 cccgccgcccccgccctcagcgccg 185
>emb|CR603148.1| full-length cDNA clone CS0DH003YP10 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1502 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR601484.1| full-length cDNA clone CS0DA006YF17 of Neuroblastoma of Homo sapiens (human) Length = 1470 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 160 cccgccgcccccgccctcagcgccg 184
>emb|CR600717.1| full-length cDNA clone CL0BB015ZA10 of Neuroblastoma of Homo sapiens (human) Length = 1466 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 155 cccgccgcccccgccctcagcgccg 179
>emb|CR599843.1| full-length cDNA clone CS0DA002YO04 of Neuroblastoma of Homo sapiens (human) Length = 1456 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 166 cccgccgcccccgccctcagcgccg 190
>emb|CR600196.1| full-length cDNA clone CS0DM006YK15 of Fetal liver of Homo sapiens (human) Length = 1490 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR599304.1| full-length cDNA clone CS0DH007YI03 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1506 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR598060.1| full-length cDNA clone CS0DJ007YP23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1421 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 152 cccgccgcccccgccctcagcgccg 176
>emb|CR597479.1| full-length cDNA clone CS0DH006YB20 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1462 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR597183.1| full-length cDNA clone CS0DL002YG13 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1471 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 168 cccgccgcccccgccctcagcgccg 192
>emb|CR595367.1| full-length cDNA clone CS0DI086YK09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1444 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR594786.1| full-length cDNA clone CS0DF023YD01 of Fetal brain of Homo sapiens (human) Length = 1490 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>emb|CR594591.1| full-length cDNA clone CS0DH006YO11 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 976 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 155 cccgccgcccccgccctcagcgccg 179
>emb|CR593602.1| full-length cDNA clone CS0DE008YI23 of Placenta of Homo sapiens (human) Length = 1467 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 162 cccgccgcccccgccctcagcgccg 186
>emb|CR591111.1| full-length cDNA clone CS0DF015YC24 of Fetal brain of Homo sapiens (human) Length = 1409 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 179 cccgccgcccccgccctcagcgccg 203
>emb|CR590758.1| full-length cDNA clone CS0DI026YJ05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1454 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 155 cccgccgcccccgccctcagcgccg 179
>emb|CR590526.1| full-length cDNA clone CS0DF014YD22 of Fetal brain of Homo sapiens (human) Length = 1505 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 174 cccgccgcccccgccctcagcgccg 198
>dbj|AB200391.1| Ipomoea nil PnSCR mRNA for SCARECROW, complete cds Length = 2505 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 ctccctcccgccgccgccgcc 138 ||||||||||||||||||||| Sbjct: 1006 ctccctcccgccgccgccgcc 1026
>gb|AC005917.3| Arabidopsis thaliana chromosome 2 clone F3P11 map CIC06E08, complete sequence Length = 92822 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 274 cagagccaacatgatgagattgaggcgaagttttttgaggaaagggccgctcttgaagcc 333 |||| |||| |||||||||| || || || || |||||||| || || ||||||||||| Sbjct: 33984 cagaaccaatatgatgagatggaagcaaaattctttgaggagagagcagctcttgaagct 34043 Query: 334 aagta 338 ||||| Sbjct: 34044 aagta 34048
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 cccgccgccgccgccctcagcgccg 148 |||||||||||||||||| |||||| Sbjct: 13677 cccgccgccgccgccctctgcgccg 13653
>dbj|AK150821.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015L07 product:nuclease sensitive element binding protein 1, full insert sequence Length = 1520 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 179 ccgccgccgccctcagcgccg 199
>gb|AC098484.2| Homo sapiens chromosome 1 clone RP5-994D16, complete sequence Length = 161835 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 30586 cccgccgcccccgccctcagcgccg 30610
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 145 gccgaggaccgcgtcgacctcgtgaatgc 173 ||||||| |||||||||||||| |||||| Sbjct: 3178999 gccgaggtccgcgtcgacctcgagaatgc 3178971
>gb|S83025.1| TSH receptor suppressor element-binding protein-1=Y-box protein [rats, FRTL-5 thyroid cell, mRNA, 1512 nt] Length = 1512 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 158 ccgccgccgccctcagcgccg 178
>ref|NG_001276.1| Homo sapiens Y box binding protein 1 pseudogene 1 (YBX1P1) on chromosome 14 Length = 2168 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 611 cccgccgcccccgccctcagcgccg 635
>dbj|AK007113.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700102N10 product:unclassifiable, full insert sequence Length = 1016 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 192 ccgccgccgccctcagcgccg 172
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 cccgccgccgccgccctcagcgccg 148 |||||||||||||||||| |||||| Sbjct: 14669699 cccgccgccgccgccctctgcgccg 14669675 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tccctcccgccgccgccgcc 138 |||||||||||||||||||| Sbjct: 36009237 tccctcccgccgccgccgcc 36009218
>ref|XM_573093.1| PREDICTED: Rattus norvegicus nuclease sensitive element binding protein 1 (Nsep1), mRNA Length = 1540 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 174 ccgccgccgccctcagcgccg 194
>ref|XM_579514.1| PREDICTED: Rattus norvegicus similar to nuclease sensitive element binding protein 1 (LOC497735), mRNA Length = 1420 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 155 ccgccgccgccctcagcgccg 175
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 ctccctcccgccgccgccgcc 138 ||||||||||||||||||||| Sbjct: 76982 ctccctcccgccgccgccgcc 76962
>emb|BX001055.11| Zebrafish DNA sequence from clone CH211-87M5 in linkage group 9, complete sequence Length = 194418 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 acctaccactgaaaatgctgcagag 444 |||||| |||||||||||||||||| Sbjct: 144005 acctacaactgaaaatgctgcagag 143981
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 tccctcccgccgccgccgccc 139 ||||||||||||||||||||| Sbjct: 152503 tccctcccgccgccgccgccc 152483
>gb|AY891391.1| Synthetic construct Homo sapiens clone FLH030949.01L nuclease sensitive element binding protein 1 (NSEP1) mRNA, partial cds Length = 975 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 43 cccgccgcccccgccctcagcgccg 67
>gb|AY888736.1| Synthetic construct Homo sapiens clone FLH030953.01X nuclease sensitive element binding protein 1 (NSEP1) mRNA, complete cds Length = 975 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 43 cccgccgcccccgccctcagcgccg 67
>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete sequence Length = 189900 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cctcccgccgccgccgccctc 141 ||||||||||||||||||||| Sbjct: 40227 cctcccgccgccgccgccctc 40247
>gb|AY891136.1| Synthetic construct Homo sapiens clone FLH007972.01L nuclease sensitive element binding protein 1 (NSEP1) mRNA, partial cds Length = 975 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 43 cccgccgcccccgccctcagcgccg 67
>dbj|AB046928.2| Rattus norvegicus rBYB1 mRNA for brain Y-box binding protein 1, complete cds Length = 1491 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 323 ccgccgccgccctcagcgccg 343
>dbj|AK107064.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E04, full insert sequence Length = 1986 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 |||||||||||||||||| |||||| Sbjct: 1545 cccgccgccgccgccctctgcgccg 1569
>dbj|AK069852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036I06, full insert sequence Length = 1660 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 tccctcccgccgccgccgccc 139 ||||||||||||||||||||| Sbjct: 553 tccctcccgccgccgccgccc 533
>emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-783L4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184656 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 62423 cccgccgcccccgccctcagcgccg 62399
>gb|BC111513.1| Xenopus laevis cDNA clone IMAGE:5505827, partial cds Length = 2952 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgccg 136 ||||||||||||||||||||| Sbjct: 324 ccctccctcccgccgccgccg 304
>emb|BX470216.11| Mouse DNA sequence from clone RP23-390M8 on chromosome 4, complete sequence Length = 162454 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 7065 ccgccgccgccctcagcgccg 7045
>gb|BC002411.2| Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:8655 IMAGE:2961659), complete cds Length = 1543 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 157 cccgccgcccccgccctcagcgccg 181
>gb|DQ120686.1| Pan troglodytes rcNSEP1 gene, partial cds Length = 957 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 31 cccgccgcccccgccctcagcgccg 55
>gb|DQ120685.1| Homo sapiens rcNSEP1 gene, partial cds Length = 957 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 31 cccgccgcccccgccctcagcgccg 55
>gb|L37516.1|HUMPSDBPB Homo sapiens DNA-binding protein B pseudogene (PSDBPB1) gene, complete cds Length = 2168 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 611 cccgccgcccccgccctcagcgccg 635
>gb|U33197.1|MMU33197 Mus musculus Y-box binding protein mYB-1b mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 157 ccgccgccgccctcagcgccg 177
>gb|U33196.1|MMU33196 Mus musculus Y-box binding protein mYB-1a mRNA, complete cds Length = 1194 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 156 ccgccgccgccctcagcgccg 176
>gb|U16821.1|OCU16821 Oryctolagus cuniculus mRNP particle major protein p50 mRNA, complete cds Length = 1503 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 165 cccgccgcccccgccctcagcgccg 189
>gb|M62867.1|MUSMSY1 Mouse Y box transcription factor (MSY-1) mRNA, complete cds Length = 1469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 161 ccgccgccgccctcagcgccg 181
>emb|AL391261.3|CNS06C85 Human chromosome 14 DNA sequence BAC C-2014B16 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162144 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 5620 cccgccgcccccgccctcagcgccg 5644
>gb|J03827.1|HUMYB1A Y box binding protein-1 (YB-1) mRNA Length = 1481 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 169 cccgccgcccccgccctcagcgccg 193
>emb|X96666.1|HSYB1 H.sapiens YB-1 gene promoter region Length = 2550 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 2229 cccgccgcccccgccctcagcgccg 2253
>gb|M57299.1|RATEFIA Rat enhancer factor I subunit A gene, complete cds Length = 1489 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 140 ccgccgccgccctcagcgccg 160
>gb|M69138.1|RATCDS Rat mRNA, complete cds Length = 1564 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 300 ccgccgccgccctcagcgccg 320
>gb|M60419.1|MUSYBOXDNA Mouse Y-box binding protein 1/DNA binding protein B mRNA, complete cds Length = 1321 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 161 ccgccgccgccctcagcgccg 181
>gb|M85234.1|HUMRNABP Human nuclease sensitive element binding protein-1 mRNA, complete cds Length = 1474 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 277 cccgccgcccccgccctcagcgccg 301
>gb|M24070.1|HUMDBPB Human DNA-binding protein B (dbpB) gene, 3' end Length = 1452 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 163 cccgccgcccccgccctcagcgccg 187
>dbj|D13309.1|RATRDBPB Rat mRNA for DNA-binding protein B Length = 1403 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccgccgccgccctcagcgccg 148 ||||||||||||||||||||| Sbjct: 134 ccgccgccgccctcagcgccg 154
>gb|L28809.1|HUMAAE Homo sapiens dbpB-like protein mRNA, complete cds Length = 1458 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcagcgccg 148 ||||||||| ||||||||||||||| Sbjct: 124 cccgccgcccccgccctcagcgccg 148
>ref|NM_112274.3| Arabidopsis thaliana transcription factor AT3G14180 mRNA, complete cds Length = 1736 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cctccctcccgccgccgccg 136 |||||||||||||||||||| Sbjct: 471 cctccctcccgccgccgccg 452
>gb|AY376897.1| Gallus gallus SNM1B (SNM1B) mRNA, complete cds Length = 2663 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccc 139 |||||||||||||||||||| Sbjct: 108 ccctcccgccgccgccgccc 127
>ref|XM_508329.1| PREDICTED: Pan troglodytes similar to HIV-1 Tat interactive protein 2, 30kDa; Tat-interacting protein (30kD); HIV-1 Tat interactive protein 2, 30 kDa; HIV-1 Tat interactive protein 2, 30 kD (LOC451077), mRNA Length = 1176 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgccg 148 ||||||||||||| |||||||||| Sbjct: 382 ccgccgccgccgcgctcagcgccg 359
>gb|DQ214545.1| Taeniopygia guttata clone 0063P0007H08 RIKEN cDNA 2900070E19 variant 2-like mRNA, complete sequence Length = 1134 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagc 144 |||||||||||||||||||| Sbjct: 166 ccgccgccgccgccctcagc 147
>gb|DQ214544.1| Taeniopygia guttata clone 0065P0011C11 RIKEN cDNA 2900070E19 variant 2-like mRNA, complete sequence Length = 1146 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagc 144 |||||||||||||||||||| Sbjct: 171 ccgccgccgccgccctcagc 152
>gb|DQ214194.1| Taeniopygia guttata clone 0062P0003B03 nitrogen fixation cluster-like (NIFU)-like mRNA, complete sequence Length = 800 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgccg 148 ||||| |||||||||||||||||| Sbjct: 36 ccgcccccgccgccctcagcgccg 13
>gb|DQ214193.1| Taeniopygia guttata clone 0062P0002A05 nitrogen fixation cluster-like (NIFU)-like mRNA, complete sequence Length = 1394 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgccg 148 ||||| |||||||||||||||||| Sbjct: 36 ccgcccccgccgccctcagcgccg 13
>ref|NM_001031097.1| Gallus gallus RAB10, member RAS oncogene family (RAB10), mRNA Length = 3247 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgccgccgccgccctcagcg 145 |||||||||||||||||||| Sbjct: 237 cgccgccgccgccctcagcg 256
>ref|NM_001031500.1| Gallus gallus DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) (DCLRE1B), mRNA Length = 2663 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccctcccgccgccgccgccc 139 |||||||||||||||||||| Sbjct: 108 ccctcccgccgccgccgccc 127
>ref|NM_001030917.1| Gallus gallus adaptor-related protein complex 4, beta 1 subunit (AP4B1), mRNA Length = 4092 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ccctcccgccgccgccgccc 139 |||||||||||||||||||| Sbjct: 170 ccctcccgccgccgccgccc 151
>ref|XM_478181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 ccgccgccgccgccctcagcgccg 148 ||||||||||||||||| |||||| Sbjct: 80 ccgccgccgccgccctctgcgccg 103
>ref|XM_472267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgccg 148 |||||||||||||| ||||||||| Sbjct: 469 ccgccgccgccgccatcagcgccg 446
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 ccgccgccgccgccctcagcgccg 148 |||||||||||||| ||||||||| Sbjct: 51257 ccgccgccgccgccatcagcgccg 51280
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ggcggcgcggcgagaaggag 87 |||||||||||||||||||| Sbjct: 496109 ggcggcgcggcgagaaggag 496090
>gb|AY023178.1| Oryza sativa microsatellite MRG5503 containing (GCG)X8, closest to marker L655, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ctccctccctcccgccgccg 133 |||||||||||||||||||| Sbjct: 22 ctccctccctcccgccgccg 3
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 ccgccgccgccgccctcagcgccg 148 |||||||||||||| ||||||||| Sbjct: 155967 ccgccgccgccgccatcagcgccg 155990
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ccctccctcccgccgccgcc 135 |||||||||||||||||||| Sbjct: 46030 ccctccctcccgccgccgcc 46011
>ref|XM_414712.1| PREDICTED: Gallus gallus periplakin (PPL), mRNA Length = 5919 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 aagccaagtaccagaagctg 348 |||||||||||||||||||| Sbjct: 1274 aagccaagtaccagaagctg 1293
>ref|XM_419394.1| PREDICTED: Gallus gallus similar to Apoptosis stimulating of p53 protein 2 (Tumor suppressor p53-binding protein 2) (p53-binding protein 2) (53BP2) (Bcl2-binding protein) (Bbp) (LOC421329), mRNA Length = 4979 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tgctttgaaaacaaatgaag 508 |||||||||||||||||||| Sbjct: 4595 tgctttgaaaacaaatgaag 4614
>ref|XM_324018.1| Neurospora crassa OR74A predicted protein (NCU04663.1) partial mRNA Length = 3435 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcag 143 |||||||||||||||||||| Sbjct: 3240 cccgccgccgccgccctcag 3259
>ref|XM_954113.1| Neurospora crassa OR74A hypothetical protein (NCU04663.1) partial mRNA Length = 3435 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cccgccgccgccgccctcag 143 |||||||||||||||||||| Sbjct: 3240 cccgccgccgccgccctcag 3259
>ref|NM_172806.2| Mus musculus BTB (POZ) domain containing 7 (Btbd7), mRNA Length = 4325 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 ccgccgccgccgccctcagcgccg 148 ||||||||||||||| |||||||| Sbjct: 141 ccgccgccgccgcccccagcgccg 118
>ref|XM_572399.1| Cryptococcus neoformans var. neoformans JEC21 chitin synthase 4 (CNH02270) partial mRNA Length = 4813 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ggcggcgcggcgagaaggag 87 |||||||||||||||||||| Sbjct: 432 ggcggcgcggcgagaaggag 413
>gb|AC122367.4| Mus musculus BAC clone RP23-449L24 from chromosome 12, complete sequence Length = 200004 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 ccgccgccgccgccctcagcgccg 148 ||||||||||||||| |||||||| Sbjct: 59781 ccgccgccgccgcccccagcgccg 59804
>ref|XM_537756.2| PREDICTED: Canis familiaris similar to carboxypeptidase D precursor (LOC480636), mRNA Length = 4350 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gccgccgccgccctcagcgccgag 150 ||||||||| |||||||||||||| Sbjct: 236 gccgccgcctccctcagcgccgag 213
>ref|XM_810950.1| Trypanosoma cruzi strain CL Brener vacuolar transport protein 4A (Tc00.1047053511003.140) partial mRNA Length = 1347 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ttttttgaggaaagggccgc 323 |||||||||||||||||||| Sbjct: 26 ttttttgaggaaagggccgc 7
>gb|AC124698.4| Mus musculus BAC clone RP24-180F7 from chromosome 3, complete sequence Length = 164187 Score = 40.1 bits (20), Expect = 6.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 123 tcccgccgccgccgccctcagcgccgag 150 |||||||||||||| ||||||||||||| Sbjct: 7881 tcccgccgccgccg-cctcagcgccgag 7907
>gb|AC092098.3| Homo sapiens BAC clone RP11-533K11 from 7, complete sequence Length = 198786 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 taccactgaaaatgctgcag 442 |||||||||||||||||||| Sbjct: 45507 taccactgaaaatgctgcag 45488 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,726,694 Number of Sequences: 3902068 Number of extensions: 5726694 Number of successful extensions: 282394 Number of sequences better than 10.0: 315 Number of HSP's better than 10.0 without gapping: 327 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 267738 Number of HSP's gapped (non-prelim): 14657 length of query: 513 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 490 effective length of database: 17,143,297,704 effective search space: 8400215874960 effective search space used: 8400215874960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)