>PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101|
          Length = 678

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
 Frame = +1

Query: 43  VAEIAMAPASCP-----PTATPLAASSSPIDSPSLKAAIAMA 153
           +AE A+AP + P     PT+ P AA  + + SPS+ A  A A
Sbjct: 5   MAEEAVAPVAVPTTQEQPTSQPAAAQVTTVTSPSVTATAAAA 46

>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 58   MAPASCPPTATPLAASSSPIDSPSLKAAIA 147
            + P SCPPT+TP A  SS    P   AA++
Sbjct: 1039 ITPPSCPPTSTPPAGPSSS-SQPPCSAAVS 1067

>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 58   MAPASCPPTATPLAASSSPIDSPSLKAAIA 147
            + P SCPPT+TP A  SS    P   AA++
Sbjct: 1039 ITPPSCPPTSTPPAGPSSS-SQPPCSAAVS 1067


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,291,737
Number of Sequences: 219361
Number of extensions: 1034582
Number of successful extensions: 3746
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3738
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)