>ref|XM_483731.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 957

 Score =  121 bits (61), Expect = 3e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                       
Query: 230 actggaagcgcaaggccaaggagcggaagcgcgagattctccgcctccgcgaagagctca 289
           |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 185 actggaagcgcaaggccaaggaccggaagcgcgagatcctccgcctccgcgaggagctca 244

                        
Query: 290 agctcctccaaga 302
           |||||||||||||
Sbjct: 245 agctcctccaaga 257



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 103 tcctcgtccccgatagactcgccatcgctcaaggcagccatcgcaatggctctcatccag 162
           |||||||| | |||||| ||||| ||||||| ||| ||| |||| |||||||||||||| 
Sbjct: 64  tcctcgtcgcggatagagtcgccgtcgctcagggcggccctcgccatggctctcatccac 123

                            
Query: 163 tacaaacgcctcccctc 179
           ||||| |||||||||||
Sbjct: 124 tacaaccgcctcccctc 140



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 537 acagcttagcttgtcgactgatttcctggtggag 570
           ||||||||||||||||| ||||||||||||||||
Sbjct: 282 acagcttagcttgtcgattgatttcctggtggag 315



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 62 ctcccgcctcctgcccgccgacggcgacgccg 93
          ||||||||||| ||||||||||| ||||||||
Sbjct: 8  ctcccgcctcccgcccgccgacgccgacgccg 39

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                            
Query: 242      aggccaaggagcggaagcgcgagattctccgcctccgcgaagagctcaagctcctccaag 301
                |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 27804048 aggccaaggaccggaagcgcgagatcctccgcctccgcgaggagctcaagctcctccaag 27804107



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                            
Query: 304      ggggtgcgcggggaggcgatggagccgccagttgcatcatgccgctgccacttcttcgac 363
                |||| ||||||||||| |||||||||||| || || || ||||| |||||||||||||||
Sbjct: 27804179 ggggcgcgcggggaggagatggagccgccggtcgcgtcgtgccgatgccacttcttcgac 27804238

                      
Query: 364      gggtgc 369
                ||||||
Sbjct: 27804239 gggtgc 27804244



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 103      tcctcgtccccgatagactcgccatcgctcaaggcagccatcgcaatggctctcatccag 162
                |||||||| | |||||| ||||| ||||||| ||| ||| |||| |||||||||||||| 
Sbjct: 27803838 tcctcgtcgcggatagagtcgccgtcgctcagggcggccctcgccatggctctcatccac 27803897

                                 
Query: 163      tacaaacgcctcccctc 179
                ||||| |||||||||||
Sbjct: 27803898 tacaaccgcctcccctc 27803914



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                                 
Query: 403      ggggagcattgggtcgacgaggtgctgcggaggaggttcctcagattgg 451
                |||||||| ||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 27804278 ggggagcactgggtcgacgacgtgctgcggaggagattcgtcagattgg 27804326



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 537      acagcttagcttgtcgactgatttcctggtggag 570
                ||||||||||||||||| ||||||||||||||||
Sbjct: 27804749 acagcttagcttgtcgattgatttcctggtggag 27804782



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 47/52 (90%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                    
Query: 45       cgccgaaatcgccatggctcc---cgcctcctgcccgccgacggcgacgccg 93
                |||||||||||||||||||||   ||||||| ||||||||||| ||||||||
Sbjct: 27803762 cgccgaaatcgccatggctcctcccgcctcccgcccgccgacgccgacgccg 27803813

>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0439B07
          Length = 89475

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                         
Query: 242   aggccaaggagcggaagcgcgagattctccgcctccgcgaagagctcaagctcctccaag 301
             |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 58505 aggccaaggaccggaagcgcgagatcctccgcctccgcgaggagctcaagctcctccaag 58564



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                         
Query: 304   ggggtgcgcggggaggcgatggagccgccagttgcatcatgccgctgccacttcttcgac 363
             |||| ||||||||||| |||||||||||| || || || ||||| |||||||||||||||
Sbjct: 58636 ggggcgcgcggggaggagatggagccgccggtcgcgtcgtgccgatgccacttcttcgac 58695

                   
Query: 364   gggtgc 369
             ||||||
Sbjct: 58696 gggtgc 58701



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 103   tcctcgtccccgatagactcgccatcgctcaaggcagccatcgcaatggctctcatccag 162
             |||||||| | |||||| ||||| ||||||| ||| ||| |||| |||||||||||||| 
Sbjct: 58295 tcctcgtcgcggatagagtcgccgtcgctcagggcggccctcgccatggctctcatccac 58354

                              
Query: 163   tacaaacgcctcccctc 179
             ||||| |||||||||||
Sbjct: 58355 tacaaccgcctcccctc 58371



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 403   ggggagcattgggtcgacgaggtgctgcggaggaggttcctcagattgg 451
             |||||||| ||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 58735 ggggagcactgggtcgacgacgtgctgcggaggagattcgtcagattgg 58783



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 537   acagcttagcttgtcgactgatttcctggtggag 570
             ||||||||||||||||| ||||||||||||||||
Sbjct: 59206 acagcttagcttgtcgattgatttcctggtggag 59239



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 47/52 (90%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                 
Query: 45    cgccgaaatcgccatggctcc---cgcctcctgcccgccgacggcgacgccg 93
             |||||||||||||||||||||   ||||||| ||||||||||| ||||||||
Sbjct: 58219 cgccgaaatcgccatggctcctcccgcctcccgcccgccgacgccgacgccg 58270

>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 57/60 (95%)
 Strand = Plus / Plus

                                                                         
Query: 242   aggccaaggagcggaagcgcgagattctccgcctccgcgaagagctcaagctcctccaag 301
             |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 12126 aggccaaggaccggaagcgcgagatcctccgcctccgcgaggagctcaagctcctccaag 12185



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                         
Query: 304   ggggtgcgcggggaggcgatggagccgccagttgcatcatgccgctgccacttcttcgac 363
             |||| ||||||||||| |||||||||||| || || || ||||| |||||||||||||||
Sbjct: 12257 ggggcgcgcggggaggagatggagccgccggtcgcgtcgtgccgatgccacttcttcgac 12316

                   
Query: 364   gggtgc 369
             ||||||
Sbjct: 12317 gggtgc 12322



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 103   tcctcgtccccgatagactcgccatcgctcaaggcagccatcgcaatggctctcatccag 162
             |||||||| | |||||| ||||| ||||||| ||| ||| |||| |||||||||||||| 
Sbjct: 11916 tcctcgtcgcggatagagtcgccgtcgctcagggcggccctcgccatggctctcatccac 11975

                              
Query: 163   tacaaacgcctcccctc 179
             ||||| |||||||||||
Sbjct: 11976 tacaaccgcctcccctc 11992



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 403   ggggagcattgggtcgacgaggtgctgcggaggaggttcctcagattgg 451
             |||||||| ||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 12356 ggggagcactgggtcgacgacgtgctgcggaggagattcgtcagattgg 12404



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 537   acagcttagcttgtcgactgatttcctggtggag 570
             ||||||||||||||||| ||||||||||||||||
Sbjct: 12827 acagcttagcttgtcgattgatttcctggtggag 12860



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 47/52 (90%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                 
Query: 45    cgccgaaatcgccatggctcc---cgcctcctgcccgccgacggcgacgccg 93
             |||||||||||||||||||||   ||||||| ||||||||||| ||||||||
Sbjct: 11840 cgccgaaatcgccatggctcctcccgcctcccgcccgccgacgccgacgccg 11891

>gb|AE006004.1| Caulobacter crescentus CB15 section 330 of 359 of the complete genome
          Length = 14710

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 69   ctcctgcccgccgacggcgacgccgc 94
            |||| |||||||||||||||||||||
Sbjct: 9961 ctccagcccgccgacggcgacgccgc 9986

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 66      cgcctcctgcccgccgacggcg 87
               ||||||||||||||||||||||
Sbjct: 8300913 cgcctcctgcccgccgacggcg 8300934

>gb|L08625.1|ARGLIPA Arthrobacter photogonimos photoinducible gene lipA
          Length = 1323

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 405 ggagcattgggtcgacgaggtgctgc 430
           |||||| |||||||||||||||||||
Sbjct: 67  ggagcactgggtcgacgaggtgctgc 42

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 128     cgctcaaggcagccatcgcaatggc 152
               ||||||||||||||| |||||||||
Sbjct: 1851695 cgctcaaggcagccagcgcaatggc 1851671

>ref|NM_001038869.1| Drosophila melanogaster CG33958-RA (CG33958), mRNA
          Length = 2133

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 241  aaggccaaggagcggaagcgcgaga 265
            ||||||||||||| |||||||||||
Sbjct: 1354 aaggccaaggagctgaagcgcgaga 1378

>gb|AC099006.1| Drosophila melanogaster, chromosome 2R, region 55B-55B, BAC clone
             BACR15G20, complete sequence
          Length = 136164

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   aaggccaaggagcggaagcgcgaga 265
             ||||||||||||| |||||||||||
Sbjct: 99851 aaggccaaggagctgaagcgcgaga 99875

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 65      ccgcctcctgcccgccgacggcgacgccg 93
               |||||||  ||||||||||||||||||||
Sbjct: 5989457 ccgcctcaagcccgccgacggcgacgccg 5989429

>gb|AE003800.4| Drosophila melanogaster chromosome 2R, section 50 of 73 of the complete
              sequence
          Length = 255380

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 241    aaggccaaggagcggaagcgcgaga 265
              ||||||||||||| |||||||||||
Sbjct: 129074 aaggccaaggagctgaagcgcgaga 129050

>gb|AF046002.1|AF046002 Carassius auratus secretogranin II precursor, mRNA, complete cds
          Length = 2253

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 324 ggagccgccagttgcatcatg 344
           |||||||||||||||||||||
Sbjct: 396 ggagccgccagttgcatcatg 376

>gb|AC004296.1|AC004296 Drosophila melanogaster DNA sequence (P1 DS08860 (D181)), complete
             sequence
          Length = 78054

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   aaggccaaggagcggaagcgcgaga 265
             ||||||||||||| |||||||||||
Sbjct: 24821 aaggccaaggagctgaagcgcgaga 24845

>gb|BC010431.1| Homo sapiens hypothetical protein LOC25900, isoform 3, mRNA (cDNA
           clone IMAGE:3508474), complete cds
          Length = 2815

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  ggctcccgcctcctgcccgc 79
           ||||||||||||||||||||
Sbjct: 894 ggctcccgcctcctgcccgc 875

>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     ctcctgcccgccgacggcga 88
              ||||||||||||||||||||
Sbjct: 289820 ctcctgcccgccgacggcga 289801

>emb|BX648743.1|HSM808894 Homo sapiens mRNA; cDNA DKFZp686D0339 (from clone DKFZp686D0339)
          Length = 3168

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  ggctcccgcctcctgcccgc 79
           ||||||||||||||||||||
Sbjct: 394 ggctcccgcctcctgcccgc 375

>emb|BX648701.1|HSM808852 Homo sapiens mRNA; cDNA DKFZp686K1039 (from clone DKFZp686K1039)
          Length = 3169

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  ggctcccgcctcctgcccgc 79
           ||||||||||||||||||||
Sbjct: 394 ggctcccgcctcctgcccgc 375

>gb|AE005894.1| Caulobacter crescentus CB15 section 220 of 359 of the complete genome
          Length = 11411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   cctgcccgccgacggcgacgccgc 94
            ||||||||||| ||||||||||||
Sbjct: 2755 cctgcccgccgtcggcgacgccgc 2778

>emb|CR616146.1| full-length cDNA clone CS0DI036YN10 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2892

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  ggctcccgcctcctgcccgc 79
           ||||||||||||||||||||
Sbjct: 793 ggctcccgcctcctgcccgc 774

>gb|BC063004.1| Homo sapiens hypothetical protein LOC25900, isoform 3, mRNA (cDNA
          clone IMAGE:5212404), complete cds
          Length = 2004

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 60 ggctcccgcctcctgcccgc 79
          ||||||||||||||||||||
Sbjct: 86 ggctcccgcctcctgcccgc 67

>gb|BC023664.2| Homo sapiens hypothetical protein LOC25900, isoform 3, mRNA (cDNA
           clone IMAGE:4896463)
          Length = 2815

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  ggctcccgcctcctgcccgc 79
           ||||||||||||||||||||
Sbjct: 894 ggctcccgcctcctgcccgc 875

>gb|BC001790.1| Homo sapiens hypothetical protein LOC25900, isoform 3, mRNA (cDNA
           clone IMAGE:3501825)
          Length = 2815

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  ggctcccgcctcctgcccgc 79
           ||||||||||||||||||||
Sbjct: 894 ggctcccgcctcctgcccgc 875

>gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 172571

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ggctcccgcctcctgcccgc 79
              ||||||||||||||||||||
Sbjct: 108498 ggctcccgcctcctgcccgc 108517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,041,958
Number of Sequences: 3902068
Number of extensions: 4041958
Number of successful extensions: 85684
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85424
Number of HSP's gapped (non-prelim): 257
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)