Clone Name | bart10d10 |
---|---|
Clone Library Name | barley_pub |
>gb|AF026538.1|AF026538 Hordeum vulgare ABA-responsive protein mRNA, complete cds Length = 1326 Score = 942 bits (475), Expect = 0.0 Identities = 498/508 (98%) Strand = Plus / Plus Query: 41 atccaaccacctccaccatcacctccgtgctccccgtgccacgcttcccctgtccgtccg 100 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atccaaccacctccaccatcacctccgtgctccccgtgccacgcttcccctgtccgtccc 60 Query: 101 agagctccaccagctagcagccatggacggcaagggctacaccacaccgccaaccgcgcc 160 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 61 agagctccaccagctagcagccatggacggcaagggctacaccacaccgccgaccgcgcc 120 Query: 161 tgcgccacaggccgaggcaggagcgcctcacttctatcccccgacggagcacggcaccgc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgcgccacaggccgaggcaggagcgcctcacttctatcccccgacggagcacggcaccgc 180 Query: 221 gccacagccgggatcgcaggtctcctatcccccgatgccaaaggccatggatggccagga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gccacagccgggatcgcaggtctcctatcccccgatgccaaaggccatggatggccagga 240 Query: 281 cgccgccgcgccacagccgggagcgccgccgcacccgtcctccccactcacgcagcaggc 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cgccgccgcgccacagccgggagcgccgccgcacccgtcctccccactcacgcagcaggc 300 Query: 341 catggagctagagggcaagtacgccgccccacagccgggcactggagctacgccgtnnnn 400 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 catggagctggagggcaagtacgccgccccacagccgggcactggagctacgccgtcccc 360 Query: 401 nnngacgcagcaagccgtggacggcaaggacgccgccccgacaccgcccgccgagtcggc 460 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgacgcagcaagccgtggacggcaaggacgccgccccgacaccgcccgccgagtcggc 420 Query: 461 gcggtggggtacgaggcagatgggtccgccagcggcgccgggggcgcatcccgagaacca 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gcggtggggtacgaggcagatgggtccgccagcggcgccgggggcgcatcccgagaacca 480 Query: 521 gcaggcagcgcagtggacggccacgcgc 548 |||||||||||||||||||||||||||| Sbjct: 481 gcaggcagcgcagtggacggccacgcgc 508
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 464 gtggggtacgaggcagatgggtccgccagcggcgccgggggcgcatcccgagaaccagca 523 |||||| |||||||||||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 17506004 gtgggggacgaggcagatgggcccgccggcggcgcccggggcgcacccggagaaccagca 17505945 Query: 524 ggcagcgcagtggacggc 541 ||| |||| ||||||||| Sbjct: 17505944 ggcggcgcggtggacggc 17505927 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 cagccatggacggcaagggctacaccac 145 |||||||||||||||||| || |||||| Sbjct: 17506152 cagccatggacggcaaggactccaccac 17506125
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 464 gtggggtacgaggcagatgggtccgccagcggcgccgggggcgcatcccgagaaccagca 523 |||||| |||||||||||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 17460375 gtgggggacgaggcagatgggcccgccggcggcgcccggggcgcacccggagaaccagca 17460316 Query: 524 ggcagcgcagtggacggc 541 ||| |||| ||||||||| Sbjct: 17460315 ggcggcgcggtggacggc 17460298 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 cagccatggacggcaagggctacaccac 145 |||||||||||||||||| || |||||| Sbjct: 17460523 cagccatggacggcaaggactccaccac 17460496
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 464 gtggggtacgaggcagatgggtccgccagcggcgccgggggcgcatcccgagaaccagca 523 |||||| |||||||||||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 26402 gtgggggacgaggcagatgggcccgccggcggcgcccggggcgcacccggagaaccagca 26461 Query: 524 ggcagcgcagtggacggc 541 ||| |||| ||||||||| Sbjct: 26462 ggcggcgcggtggacggc 26479 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 cagccatggacggcaagggctacaccac 145 |||||||||||||||||| || |||||| Sbjct: 26254 cagccatggacggcaaggactccaccac 26281
>gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence Length = 160981 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctccgt 68 |||||||||||||||||||||| Sbjct: 26657 ccacctccaccatcacctccgt 26636
>gb|AC022308.17|AC022308 Homo sapiens chromosome 15 clone RP11-34L4, complete sequence Length = 166226 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctccgt 68 |||||||||||||||||||||| Sbjct: 158253 ccacctccaccatcacctccgt 158232
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctccg 67 ||||||||||||||||||||| Sbjct: 132774 ccacctccaccatcacctccg 132754
>ref|XM_987567.1| PREDICTED: Mus musculus hypothetical protein LOC666995 (LOC666995), mRNA Length = 543 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 88 accacctccaccatcacctcc 108
>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome Length = 1395502 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 gccgccgcacccgtcctccccactc 329 ||||||||||||| ||||||||||| Sbjct: 235720 gccgccgcacccggcctccccactc 235696
>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence Length = 216974 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 172133 accacctccaccatcacctcc 172113
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgccaaccgcgcctgcgccac 168 ||||||||||||||||||||| Sbjct: 2482029 cgccaaccgcgcctgcgccac 2482009
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccacctccaccatcacctccg 67 ||||||||||||||||||||| Sbjct: 12371401 ccacctccaccatcacctccg 12371421
>gb|AC090884.1|AC090884 Homo sapiens chromosome 3 clone RP11-165B2 map 3p, complete sequence Length = 166991 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 16435 accacctccaccatcacctcc 16415
>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198481 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 143548 accacctccaccatcacctcc 143568 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 143527 accacctccaccatcacctcc 143547
>gb|AC004755.2|AC004755 Homo sapiens chromosome 19, fosmid FOS37502 (LLfos-27A6) and 3' overlapping PCR product, complete sequence Length = 41159 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 2093 accacctccaccatcacctcc 2073
>gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p, complete sequence Length = 161014 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 90471 accacctccaccatcacctcc 90491
>gb|AC069462.3| Homo sapiens chromosome 3 clone RP11-271E2 map 3p, complete sequence Length = 161577 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 105648 accacctccaccatcacctcc 105628
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ccgcccgccgagtcggcgcgg 464 ||||||||||||||||||||| Sbjct: 1862931 ccgcccgccgagtcggcgcgg 1862951
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccacctccaccatcacctccg 67 ||||||||||||||||||||| Sbjct: 12378741 ccacctccaccatcacctccg 12378761
>emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chromosome 4, complete sequence Length = 199350 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 accacctccaccatcacctcc 66 ||||||||||||||||||||| Sbjct: 121591 accacctccaccatcacctcc 121571
>gb|BC060636.1| Mus musculus DiGeorge syndrome critical region gene 2, mRNA (cDNA clone MGC:79172 IMAGE:6849298), complete cds Length = 4040 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1316 cgccagcggcgccgggagcgcatc 1339
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 ccccactcacgcagcaggccatgg 345 |||||||||||| ||||||||||| Sbjct: 3489223 ccccactcacgcggcaggccatgg 3489246
>ref|NM_005137.1| Homo sapiens DiGeorge syndrome critical region gene 2 (DGCR2), mRNA Length = 4436 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1299 cgccagcggcgccgggagcgcatc 1322
>gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome 15, complete sequence Length = 233904 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 accacctccaccatcacctc 65 |||||||||||||||||||| Sbjct: 118712 accacctccaccatcacctc 118693
>gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-248F7, complete sequence Length = 259474 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctcc 66 |||||||||||||||||||| Sbjct: 51042 ccacctccaccatcacctcc 51023
>gb|BC031506.1| Mus musculus DiGeorge syndrome critical region gene 2, mRNA (cDNA clone IMAGE:2609402), complete cds Length = 2809 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 85 cgccagcggcgccgggagcgcatc 108
>emb|AL954664.17| Human DNA sequence from clone LL0YNC03-56G10 on chromosome X Contains the 3' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a novel gene and five CpG islands, complete sequence Length = 39200 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 21315 cacccgtcctccccactcac 21296 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 21266 cacccgtcctccccactcac 21247
>emb|AL354913.11| Human DNA sequence from clone RP11-69O18 on chromosome 6 Contains a pseudogene similar to part of glucosaminyl (N-acetyl) transferase 1 (GCNT1), complete sequence Length = 106233 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 taatccaaccacctccacca 58 |||||||||||||||||||| Sbjct: 86476 taatccaaccacctccacca 86457
>emb|X84076.1|HSDGCR2 H.sapiens mRNA for DGCR2 Length = 4398 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1260 cgccagcggcgccgggagcgcatc 1283
>emb|X83545.1|HSIDD H.sapiens mRNA for a cell surface protein Length = 4399 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1263 cgccagcggcgccgggagcgcatc 1286
>emb|CR936871.1| Homo sapiens mRNA; cDNA DKFZp686I1730 (from clone DKFZp686I1730) Length = 4832 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1697 cgccagcggcgccgggagcgcatc 1720
>gb|BC040500.1| Homo sapiens DiGeorge syndrome critical region gene 2, mRNA (cDNA clone MGC:33836 IMAGE:5272271), complete cds Length = 4489 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1357 cgccagcggcgccgggagcgcatc 1380
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gcccgccgagtcggcgcggt 465 |||||||||||||||||||| Sbjct: 237821 gcccgccgagtcggcgcggt 237802
>gb|AC135611.25| Pan troglodytes clone rp43-14h17, complete sequence Length = 215721 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccacagccgggcactggag 387 |||||||||||||||||||| Sbjct: 134261 cccacagccgggcactggag 134280
>emb|CR602533.1| full-length cDNA clone CS0DL006YH15 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2459 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 380 cgccagcggcgccgggagcgcatc 403
>dbj|AK145495.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0007A05 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 3991 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1292 cgccagcggcgccgggagcgcatc 1315
>dbj|AK141594.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630037J07 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 2672 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1341 cgccagcggcgccgggagcgcatc 1364
>dbj|AK133880.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730481K15 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 3364 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 664 cgccagcggcgccgggagcgcatc 687
>dbj|AK153026.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830119F19 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 3863 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1162 cgccagcggcgccgggagcgcatc 1185
>gb|AC003063.7| Mus musculus Chromosome 16 BAC Clone b40-o20 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 128143 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 13643 cgccagcggcgccgggagcgcatc 13620
>dbj|AK161359.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930465P06 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 1798 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1091 cgccagcggcgccgggagcgcatc 1114
>gb|AF418189.1|AF418189 Desulfonatronum lacustre DSM 10312 dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds Length = 1905 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tcacgcagcaggccatggag 347 |||||||||||||||||||| Sbjct: 1693 tcacgcagcaggccatggag 1674
>dbj|AK164263.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030048P08 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 2775 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 75 cgccagcggcgccgggagcgcatc 98
>dbj|AK161022.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4430402G13 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 5705 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 2126 cgccagcggcgccgggagcgcatc 2149
>dbj|AK163903.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230038L18 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 4004 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1304 cgccagcggcgccgggagcgcatc 1327
>dbj|AK163872.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230001A07 product:DiGeorge syndrome critical region gene 2, full insert sequence Length = 4009 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1328 cgccagcggcgccgggagcgcatc 1351
>emb|BX649323.12| Human DNA sequence from clone WI2-81109H8 on chromosome X, complete sequence Length = 37892 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 16162 cacccgtcctccccactcac 16143 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 16113 cacccgtcctccccactcac 16094
>dbj|AK088131.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004L05 product:DiGeorge syndrome gene c, full insert sequence Length = 3791 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1092 cgccagcggcgccgggagcgcatc 1115
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgcgccacagccgg 300 |||||||||||||||||||| Sbjct: 2358409 cgccgccgcgccacagccgg 2358390
>gb|AC000095.5| Homo sapiens Chromosome 22q11.2 Fosmid Clone f41c7 In DGCR Region, complete sequence Length = 43728 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 40569 cgccagcggcgccgggagcgcatc 40546
>gb|AC016830.5| Homo sapiens chromosome 22 clone b81b3 map 22q11, complete sequence Length = 192720 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccacagccgggcactggag 387 |||||||||||||||||||| Sbjct: 47438 cccacagccgggcactggag 47457
>gb|AC016027.15| Homo sapiens chromosome 22 clone b476c20 map 22q11, complete sequence Length = 174991 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccacagccgggcactggag 387 |||||||||||||||||||| Sbjct: 42735 cccacagccgggcactggag 42754
>gb|AC002522.2| Homo sapiens Chromosome 22 Cosmid Clone 46a9 In DGCR Region, complete sequence Length = 39857 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 25324 cgccagcggcgccgggagcgcatc 25301
>gb|AC004461.3| Homo sapiens Chromosome 22q11.2 Cosmid Clone 119f4 In DGCR Region, complete sequence Length = 44873 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 12525 cgccagcggcgccgggagcgcatc 12502
>dbj|AK037000.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930034O06 product:DiGeorge syndrome gene c, full insert sequence Length = 3814 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1320 cgccagcggcgccgggagcgcatc 1343
>emb|CR378267.1| Pinus pinaster SSR, clone PPD2A03 Length = 139 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctcc 66 |||||||||||||||||||| Sbjct: 129 ccacctccaccatcacctcc 110
>emb|CR377502.1| Pinus pinaster SSR, clone PPA6D09 Length = 556 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccacctccaccatcacctcc 66 |||||||||||||||||||| Sbjct: 370 ccacctccaccatcacctcc 389
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccagctagcagccatggacg 129 |||||||||||||||||||| Sbjct: 21245442 ccagctagcagccatggacg 21245461
>gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, region 51B-51B, BAC clone BACR27M04, complete sequence Length = 169689 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctcc 66 |||||||||||||||||||| Sbjct: 39331 ccacctccaccatcacctcc 39312
>gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone BACR06D02, complete sequence Length = 172791 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctcc 66 |||||||||||||||||||| Sbjct: 107749 ccacctccaccatcacctcc 107730
>emb|BX511099.12| Human DNA sequence from clone XX-82516H2 on chromosome X, complete sequence Length = 25946 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 11406 cacccgtcctccccactcac 11425 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 11357 cacccgtcctccccactcac 11376
>gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484E3, complete sequence Length = 195342 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccacctccaccatcacctcc 66 |||||||||||||||||||| Sbjct: 24973 ccacctccaccatcacctcc 24992
>gb|AF215840.1|AF215840 Homo sapiens chromosome Y clone PPP2R3LY, complete sequence Length = 27918 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 19743 cacccgtcctccccactcac 19724 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 19694 cacccgtcctccccactcac 19675
>gb|AF215839.1|AF215839 Homo sapiens chromosome X clone PPP2R3LX map Xp22, complete sequence Length = 42584 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 40950 cacccgtcctccccactcac 40931
>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete sequence Length = 198559 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 accacctccaccatcacctc 65 |||||||||||||||||||| Sbjct: 170556 accacctccaccatcacctc 170575
>gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complete sequence Length = 160930 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 282 gccgccgcgccacagccgggagcgccgc 309 |||||||||||| |||||||||| |||| Sbjct: 12722 gccgccgcgccaaagccgggagccccgc 12695
>ref|XM_573327.1| PREDICTED: Rattus norvegicus DiGeorge syndrome critical region gene 2 (predicted) (Dgcr2_predicted), mRNA Length = 3977 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1304 cgccagcggcgccgggagcgcatc 1327
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0656E03 Length = 181786 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccagctagcagccatggacg 129 |||||||||||||||||||| Sbjct: 40818 ccagctagcagccatggacg 40837
>gb|AC000096.17| Mus musculus Chromosome 16 BAC Clone bd3-6 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 127343 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 102515 cgccagcggcgccgggagcgcatc 102492
>dbj|AK129070.1| Mus musculus mRNA for mKIAA0163 protein Length = 3925 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1225 cgccagcggcgccgggagcgcatc 1248
>dbj|AK070901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O19, full insert sequence Length = 457 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 cagccatggacggcaagggctacaccac 145 |||||||||||||||||| || |||||| Sbjct: 100 cagccatggacggcaaggactccaccac 127
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ggatggccaggacgccgccg 288 |||||||||||||||||||| Sbjct: 403773 ggatggccaggacgccgccg 403792
>gb|BC032430.1| Homo sapiens DiGeorge syndrome critical region gene 2, mRNA (cDNA clone MGC:40330 IMAGE:5243412), complete cds Length = 2857 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1298 cgccagcggcgccgggagcgcatc 1321
>emb|CR456433.1| Homo sapiens DGCR2 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.DGCR2.V2) Length = 1818 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1134 cgccagcggcgccgggagcgcatc 1157
>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete sequence Length = 254438 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccacctccaccatcacctcc 66 |||||||||||||||||||| Sbjct: 143605 ccacctccaccatcacctcc 143586
>gb|BC081905.1| Rattus norvegicus DiGeorge syndrome critical region gene 2, mRNA (cDNA clone MGC:93833 IMAGE:7111034), complete cds Length = 2030 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1382 cgccagcggcgccgggagcgcatc 1405
>dbj|D79985.1| Homo sapiens KIAA0163 mRNA, complete cds Length = 4436 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1299 cgccagcggcgccgggagcgcatc 1322
>gb|L77560.1|HUMLAN Homo sapiens LAN mRNA, 3' end Length = 4399 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1263 cgccagcggcgccgggagcgcatc 1286
>gb|L77570.1|HUMDGCRCEN Homo sapiens DiGeorge syndrome critical region, centromeric end Length = 108400 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 5625 cgccagcggcgccgggagcgcatc 5602
>ref|NM_010048.2| Mus musculus DiGeorge syndrome critical region gene 2 (Dgcr2), mRNA Length = 4040 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1316 cgccagcggcgccgggagcgcatc 1339
>ref|NM_001012146.1| Rattus norvegicus DiGeorge syndrome critical region gene 2 (Dgcr2), mRNA Length = 2030 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1382 cgccagcggcgccgggagcgcatc 1405
>gb|BC035425.1| Homo sapiens DiGeorge syndrome critical region gene 2, mRNA (cDNA clone IMAGE:4184290) Length = 2876 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1309 cgccagcggcgccgggagcgcatc 1332
>gb|BC020339.1| Homo sapiens DiGeorge syndrome critical region gene 2, mRNA (cDNA clone IMAGE:4180979) Length = 2876 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1309 cgccagcggcgccgggagcgcatc 1332
>gb|BC062978.1| Mus musculus DiGeorge syndrome critical region gene 2, mRNA (cDNA clone MGC:86148 IMAGE:30356000), complete cds Length = 3985 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1270 cgccagcggcgccgggagcgcatc 1293
>gb|AC078895.34| Mus musculus strain C57BL/6J chromosome 16 clone rp23-372h6, complete sequence Length = 211256 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 142001 cgccagcggcgccgggagcgcatc 142024
>dbj|AB209137.1| Homo sapiens mRNA for NY-REN-8 antigen variant protein Length = 5814 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 1516 cacccgtcctccccactcac 1497 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cacccgtcctccccactcac 331 |||||||||||||||||||| Sbjct: 1467 cacccgtcctccccactcac 1448
>dbj|D78641.1|MUSMEGL Mouse mRNA for membrane glycoprotein, complete cds Length = 3999 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cgccagcggcgccgggggcgcatc 510 |||||||||||||||| ||||||| Sbjct: 1300 cgccagcggcgccgggagcgcatc 1323 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,224,089 Number of Sequences: 3902068 Number of extensions: 3224089 Number of successful extensions: 91352 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90529 Number of HSP's gapped (non-prelim): 818 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)