ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart10d04 |
|---|---|
| Clone Library Name | barley_pub |
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 77.0 bits (188), Expect = 4e-14 Identities = 35/70 (50%), Positives = 46/70 (65%) Frame = +3 Query: 369 SGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAAL 548 S F+CNICLD A D VV+LCGHL+CWPC+ +WL T NN Q CPV ++A+ Sbjct: 21 SARFECNICLDAAKDAVVSLCGHLFCWPCLSQWL------DTRPNN----QVCPVCKSAI 70 Query: 549 SADSLVPLYG 578 + +VP+YG Sbjct: 71 DGNKVVPIYG 80
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 50.4 bits (119), Expect = 4e-06 Identities = 25/75 (33%), Positives = 36/75 (48%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCP 530 +T+T G C +CL P T CGH++CW CI EW + +Q+CP Sbjct: 318 STSTEAVGK--CTLCLSTRQHPTATPCGHVFCWSCIMEW-------------CNEKQECP 362 Query: 531 VWQAALSADSLVPLY 575 + + + SLV LY Sbjct: 363 LCRTPNTHSSLVCLY 377
>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 306 Score = 50.4 bits (119), Expect = 4e-06 Identities = 26/102 (25%), Positives = 47/102 (46%) Frame = +3 Query: 267 DQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYC 446 DQ ++++T++ + D + I G+ C++C++F P T CGH++C Sbjct: 227 DQHTISSITDERDLEDKNKLPFIP----------EGNRKCSLCMEFIHCPAATECGHIFC 276 Query: 447 WPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSLVPL 572 W CI W TS + +CP+ +A S ++ L Sbjct: 277 WSCINGW-------------TSKKSECPLCRAFSSPSKIILL 305
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 49.3 bits (116), Expect = 8e-06 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C +CL DP CGH++CW C+ +W++ RQ+CP+ +A + L Sbjct: 245 CMLCLSPMKDPSCGECGHVFCWKCVLDWVK-------------ERQECPLCRAKMRESQL 291 Query: 564 VPL 572 +PL Sbjct: 292 LPL 294
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Frame = +3 Query: 282 AAMTNQPSVSDN--KLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPC 455 A +N PS +D +L K + +M ++GS +C ICLD PV+T C H++C PC Sbjct: 725 AVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDE-ECAICLDSLTVPVITHCAHVFCKPC 783 Query: 456 IYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSLV 566 I + ++ N +CP+ + + D+L+ Sbjct: 784 ICQVIQ----------NEQPHAKCPLCRNDIHEDNLL 810
>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting| protein) Length = 510 Score = 47.4 bits (111), Expect = 3e-05 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = +3 Query: 330 NISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVSATSGNN 506 N E A A G C+ICL+F +PV CGH +C CI W RP + T+ Sbjct: 11 NAGAEALALAAELQGEATCSICLEFFREPVSVECGHSFCRACIMRCWERPGAGTGTATRT 70 Query: 507 TSARQQCP 530 CP Sbjct: 71 LPCPLPCP 78
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 46.2 bits (108), Expect = 7e-05 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = +3 Query: 300 PSVSDN--KLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 PS +D +L K + +M ++GS +C ICLD PV+T C H++C PCI + ++ Sbjct: 728 PSGNDTPEELRKKLIKKMKLILSSGSDE-ECAICLDSLTVPVITHCAHVFCKPCICQCIQ 786 Query: 474 PSVVSATSGNNTSARQQCPVWQAALSADSLV 566 N +CP+ + + D+L+ Sbjct: 787 ----------NEQPHAKCPLCRNDIHGDNLL 807
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 45.8 bits (107), Expect = 9e-05 Identities = 23/52 (44%), Positives = 32/52 (61%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCP 530 +F C+ICL+ +P CGHL+CW CI E V+ATS +TS+ +CP Sbjct: 252 TFQCSICLE-NKNPSALFCGHLFCWTCIQE----HAVAATSSASTSS-ARCP 297
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 45.4 bits (106), Expect = 1e-04 Identities = 28/87 (32%), Positives = 43/87 (49%) Frame = +3 Query: 303 SVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSV 482 S + L ++ E+P T SFDC++CL+ PV T CGH++C CI Sbjct: 15 SATPRTLERSGDSELPIT------SFDCSVCLEVLHQPVRTRCGHVFCRSCI-------- 60 Query: 483 VSATSGNNTSARQQCPVWQAALSADSL 563 ATS N + + CP +A L ++ + Sbjct: 61 --ATSIKNNN-KWTCPYCRAYLPSEGV 84
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/88 (32%), Positives = 41/88 (46%) Frame = +3 Query: 300 PSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPS 479 PS + L + E+P T SFDC +CL+ PV T CGH++C CI Sbjct: 14 PSATPRALERRGDPELPVT------SFDCAVCLEVLHQPVRTRCGHVFCRSCI------- 60 Query: 480 VVSATSGNNTSARQQCPVWQAALSADSL 563 ATS N + CP +A L ++ + Sbjct: 61 ---ATSLKNN--KWTCPYCRAYLPSEGV 83
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 44.7 bits (104), Expect = 2e-04 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = +3 Query: 300 PSVSDN--KLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 PS SD +L K + +M ++GS +C ICLD PV+T C H++C PCI + + Sbjct: 725 PSRSDTPEELRKMLIEKMKIILSSGSDE-ECAICLDSLTFPVITHCAHVFCKPCICQVI- 782 Query: 474 PSVVSATSGNNTSARQQCPVWQAALSADSLV 566 ++ +CP+ + + D+L+ Sbjct: 783 ---------HSEQPHAKCPLCRNEIHGDNLL 804
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C +CL+ P T CGHL+CW CI W S++ +CP+ + L Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAW-------------CSSKAECPLCREKFPPQKL 319 Query: 564 VPL 572 + L Sbjct: 320 IYL 322
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C +CL+ P T CGHL+CW CI W S++ +CP+ + L Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAW-------------CSSKAECPLCREKFPPQKL 319 Query: 564 VPL 572 + L Sbjct: 320 IYL 322
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 43.1 bits (100), Expect = 6e-04 Identities = 22/58 (37%), Positives = 28/58 (48%) Frame = +3 Query: 366 GSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQ 539 GSG F C ICL+ +PV CGH +C C+ T G+ AR CP+ Q Sbjct: 3 GSGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHRSAGGTGGSGGPAR--CPLCQ 58
>PEX10_PICPA (Q92265) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PAS7) Length = 419 Score = 43.1 bits (100), Expect = 6e-04 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C +CL + +P CGH +CW CI +W + Sbjct: 295 SRQCMLCLSYMTNPTAANCGHCFCWSCIIDWCK 327
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 42.7 bits (99), Expect = 7e-04 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP SGN R CP+ + +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSD-IRP-----ISGN----RPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 42.7 bits (99), Expect = 7e-04 Identities = 28/87 (32%), Positives = 40/87 (45%) Frame = +3 Query: 303 SVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSV 482 S + L + E+P T SFDC +CL+ PV T CGH++C CI Sbjct: 15 SATARALERRRDPELPVT------SFDCAVCLEVLHQPVRTRCGHVFCRSCI-------- 60 Query: 483 VSATSGNNTSARQQCPVWQAALSADSL 563 ATS N + CP +A L ++ + Sbjct: 61 --ATSLKNN--KWTCPYCRAYLPSEGV 83
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 42.7 bits (99), Expect = 7e-04 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP SGN R CP+ + +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSD-IRP-----ISGN----RPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 PA G F C +CL+ PV CGH++C C+ E L+P Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKP 59
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 PA G F C +CL+ PV CGH++C C+ E L+P Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKP 59
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 PA G F C +CL+ PV CGH++C C+ E L+P Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKP 59
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 PA+ T F C +CL+ PV CGH++C C+ E L+P Sbjct: 18 PASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKP 60
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 PA+ T F C +CL+ PV CGH++C C+ E L+P Sbjct: 18 PASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKP 60
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 PA G F C +CL+ PV CGH++C C+ E L+P Sbjct: 19 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKP 61
>PSH1_YEAST (Q12161) RING finger protein PSH1 (POB3/SPT16 histone-associated| protein 1) Length = 406 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSAT 494 N+L+ G A S C+IC D+ P++T CGH YC+ C+ W Sbjct: 7 NRLLHQNDGTKDAILYKIIESLVCSICHDYMFVPMMTPCGHNYCYGCLNTWF-------- 58 Query: 495 SGNNTSARQQCP 530 +NT CP Sbjct: 59 -ASNTQKELACP 69
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/58 (37%), Positives = 28/58 (48%) Frame = +3 Query: 366 GSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQ 539 GSG F C ICL+ +PV CGH +C C+ S G +AR CP+ Q Sbjct: 3 GSGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAAR--CPLCQ 58
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C+ICLD+ DPV+T CGH +C CI Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECI 40
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C+ICLD+ DPV+T CGH +C CI Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECI 40
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C+ICLD+ DPV+T CGH +C CI Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACI 40
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 40.8 bits (94), Expect = 0.003 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP + +R CP+ + +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTD-VRPI---------SGSRPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 40.8 bits (94), Expect = 0.003 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP + +R CP+ + +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTD-VRPI---------SGSRPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/64 (29%), Positives = 33/64 (51%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C+ICLD+ DPV CGH++C C + + SG R CP+ + + +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTD------IHPVSG----GRPVCPLCKKPFTKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 40.4 bits (93), Expect = 0.004 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 C +CL +DP CGHL+CW C+ W + Sbjct: 286 CILCLMNMSDPSCAPCGHLFCWSCLMSWCK 315
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE-WLRP 476 C ICLD+ DPV+T CGH +C CI W +P Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQP 47
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 40.0 bits (92), Expect = 0.005 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = +3 Query: 264 MDQVCMAAMTNQP-SVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHL 440 +D + + N P SVS N + E+ G+ S +C ICL+ A DPV+T C H Sbjct: 1000 LDSLARRFLDNNPDSVSQNAPSRAYIEEVIQDLRDGN-SKECPICLESADDPVLTPCAHR 1058 Query: 441 YCWPCIY-EWLRPS 479 C C+ W PS Sbjct: 1059 MCRECLLTSWRSPS 1072
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE-WLRP 476 C ICLD+ DPV+T CGH +C CI W +P Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQP 47
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 39.7 bits (91), Expect = 0.006 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C++CL++ +PV+ CGH +C CI W Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRW 56
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 39.7 bits (91), Expect = 0.006 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C++CL++ +PV+ CGH +C CI W Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRW 56
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 39.7 bits (91), Expect = 0.006 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C++CL++ +PV+ CGH +C CI W Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRW 56
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 39.3 bits (90), Expect = 0.008 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQ---CPVWQAALSA 554 C+ICL +PV CGH YC CI ++ + + + RQ+ CP +A Sbjct: 16 CSICLSLMTNPVSINCGHSYCHLCITDFFK-------NPSQKQLRQETFCCPQCRAPFHM 68 Query: 555 DSLVP 569 DSL P Sbjct: 69 DSLRP 73
>TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger protein 18)| (Testis-specific ring-finger protein) Length = 452 Score = 38.9 bits (89), Expect = 0.011 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 372 GSFDCNICLDFAADPVVTLCGHLYCWPCIY 461 G C +C+++ DPV CGH +C PC Y Sbjct: 11 GELICPLCMNYFIDPVTIDCGHSFCRPCFY 40
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 38.9 bits (89), Expect = 0.011 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C+IC D PV+T CGH +C CI E+L Sbjct: 32 CHICKDMLQTPVLTQCGHTFCSLCIREYL 60
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 38.9 bits (89), Expect = 0.011 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C+IC DF +PV+T CGH +C CI +L Sbjct: 27 CHICKDFLKNPVLTPCGHTFCSLCIRGYL 55
>TRI43_HUMAN (Q96BQ3) Tripartite motif protein 43| Length = 446 Score = 38.9 bits (89), Expect = 0.011 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICL++ DPV CGH +C PC+ Sbjct: 15 CVICLNYLVDPVTICCGHSFCRPCL 39
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 38.9 bits (89), Expect = 0.011 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ +P+ CGH +C CI ++ SV+ + CPV Q +L Sbjct: 15 CPICLELLTEPLSLDCGHSFCQACITAKIKESVII------SRGESSCPVCQTRFQPGNL 68 Query: 564 VP 569 P Sbjct: 69 RP 70
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 38.5 bits (88), Expect = 0.014 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ +P+ CGH +C CI R SV+ + CPV Q + +L Sbjct: 15 CPICLELLTEPLSIDCGHSFCQACITPNGRESVI------GQEGERSCPVCQTSYQPGNL 68 Query: 564 VP 569 P Sbjct: 69 RP 70
>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting| protein) (RING finger protein 90) Length = 511 Score = 38.5 bits (88), Expect = 0.014 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 342 EMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVS 488 E A A G C+ICL+ +PV CGH +C CI W RP S Sbjct: 15 EALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGS 64
>TRI48_HUMAN (Q8IWZ4) Tripartite motif protein 48 (RING finger protein 101)| Length = 375 Score = 38.5 bits (88), Expect = 0.014 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIY 461 C IC+++ DPV CGH +C PC Y Sbjct: 15 CPICMNYFIDPVTIDCGHSFCRPCFY 40
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 38.5 bits (88), Expect = 0.014 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C HL+C CI +R Sbjct: 286 SISCQICEHILADPVETTCRHLFCRTCILSCIR 318
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 38.1 bits (87), Expect = 0.018 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWL----RPSVVSATSGNNTSARQ 521 F C +CLDF +P + CGH YC CI L + + A +GN RQ Sbjct: 6 FCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCRAHTGNPIRNRQ 57
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 38.1 bits (87), Expect = 0.018 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 369 SGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWL 470 S F C IC D + +T CGH +C+ CI++ L Sbjct: 131 SNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSL 164
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 38.1 bits (87), Expect = 0.018 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 369 SGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWL 470 S F C IC D + +T CGH +C+ CI++ L Sbjct: 133 SNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSL 166
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 38.1 bits (87), Expect = 0.018 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCP 530 C+IC +F P++T CGH +C CI +L T+ Q+CP Sbjct: 28 CHICKEFFTAPMITGCGHTFCSLCIQRYL------------TNTSQRCP 64
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 37.7 bits (86), Expect = 0.024 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPS 479 + C IC + ++TLCGH++C PC+++ + S Sbjct: 204 YRCPICFEPPETALMTLCGHVFCCPCLFQMVNSS 237
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 37.7 bits (86), Expect = 0.024 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSAD 557 F C I L+ DPV+ G Y CI +W+ SG++T CP Q +S Sbjct: 277 FRCPISLELMKDPVIVSTGQTYERACIEKWI-------ASGHHT-----CPTTQQKMSTS 324 Query: 558 SLVPLY 575 +L P Y Sbjct: 325 ALTPNY 330
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 37.7 bits (86), Expect = 0.024 Identities = 23/95 (24%), Positives = 41/95 (43%) Frame = +3 Query: 279 MAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCI 458 + + T SV D + ++ A G FDC IC+ + ++T C H++C CI Sbjct: 601 LRSFTTSTSVEDVTDKPELLQKLVAALQDGE-DFDCPICISPPTNIIITRCAHIFCRACI 659 Query: 459 YEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 + L+ S + CP+ + +L+ L Sbjct: 660 LQTLQRS------------KPLCPLCRGSLTQSDL 682
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 37.4 bits (85), Expect = 0.031 Identities = 19/62 (30%), Positives = 27/62 (43%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ +PV C H +C CI ++ S NT + CPV + +L Sbjct: 15 CPICLELLKEPVSADCNHSFCRACI-------TLNYESNRNTDGKGNCPVCRVPYPFGNL 67 Query: 564 VP 569 P Sbjct: 68 RP 69
>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)| Length = 574 Score = 37.4 bits (85), Expect = 0.031 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 342 EMPATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPC 455 E P T G S +C IC + A D V+ CGH+ C+ C Sbjct: 507 ESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYSC 545
>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING| finger protein 67) Length = 574 Score = 37.4 bits (85), Expect = 0.031 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 342 EMPATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPC 455 E P T G S +C IC + A D V+ CGH+ C+ C Sbjct: 507 ESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYAC 545
>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent| helicase RAD16) Length = 790 Score = 37.4 bits (85), Expect = 0.031 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C +C D A +P+ + C H +C CI E+ V S NN + CPV LS D Sbjct: 537 CQLCNDEAEEPIESKCHHKFCRLCIKEY----VESFMENNN---KLTCPVCHIGLSIDLS 589 Query: 564 VP 569 P Sbjct: 590 QP 591
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 37.0 bits (84), Expect = 0.041 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C IC +F PV+T C H +C CI E+L Sbjct: 36 CYICKEFLKAPVITSCNHTFCSHCIREYL 64
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 37.0 bits (84), Expect = 0.041 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C HL+C CI L+ Sbjct: 287 SISCQICEHILADPVETSCKHLFCRICILRCLK 319
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 37.0 bits (84), Expect = 0.041 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ +P++ CGH YC C+ + + A +CPV + A+ S Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKGCL----------VSLSCHLDAELRCPVCRQAVDGSSS 65 Query: 564 VP 569 +P Sbjct: 66 LP 67
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 36.6 bits (83), Expect = 0.053 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE 464 C+ICLD +P+ CGH +C CI+E Sbjct: 20 CSICLDPMVEPMSIECGHCFCKECIFE 46
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 36.6 bits (83), Expect = 0.053 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTQCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNEITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>LNX1_MOUSE (O70263) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-binding protein 1) (Ligand of Numb-protein X 1) Length = 728 Score = 36.6 bits (83), Expect = 0.053 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C+ICL DP+ T CGH YC C+ +L Sbjct: 45 CHICLQALLDPLDTPCGHTYCTLCLTNFL 73
>LNX1_HUMAN (Q8TBB1) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-protein X 1) Length = 728 Score = 36.6 bits (83), Expect = 0.053 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C+ICL DP+ T CGH YC C+ +L Sbjct: 41 CHICLQALLDPLDTPCGHTYCTLCLTNFL 69
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 36.6 bits (83), Expect = 0.053 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C+IC DF PV+T CGH +C CI Sbjct: 28 CHICKDFLKVPVLTPCGHTFCSLCI 52
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 36.6 bits (83), Expect = 0.053 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNEITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCRFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 36.2 bits (82), Expect = 0.070 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE 464 C++CL+ +PV T CGH +C C+ E Sbjct: 13 CSVCLELFKEPVTTPCGHNFCTSCLDE 39
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 36.2 bits (82), Expect = 0.070 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCI 458 S C +C DF +PV+T C H +C CI Sbjct: 27 SLRCQVCKDFFDNPVITSCSHTFCSLCI 54
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 36.2 bits (82), Expect = 0.070 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 F C IC+ D +T CGH +C+ CI LR Sbjct: 45 FLCPICMQIIKDAFLTACGHSFCYMCIITHLR 76
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ +PV T C H++C C+ + L N QCP+ + ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQRKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 36.2 bits (82), Expect = 0.070 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSAD 557 + C ICLD + T CGH++C CI L T+A Q+CPV + + + Sbjct: 204 YKCVICLDSPENLSCTPCGHIFCNFCILSAL----------GTTAATQKCPVCRRKVHPN 253 Query: 558 SLVPL 572 ++ L Sbjct: 254 KVICL 258
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 36.2 bits (82), Expect = 0.070 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCI 458 S C +C DF +PV+T C H +C CI Sbjct: 27 SLRCQVCKDFFDNPVITSCSHTFCSLCI 54
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 36.2 bits (82), Expect = 0.070 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 21/91 (23%) Frame = +3 Query: 249 MEGGGMDQVCMAAMTNQPSVSDNKLMKNISGEMP-------------ATATAGS----GS 377 +E G DQ M T QP D+K + E P A+ TA S G Sbjct: 83 VETNGTDQEEMTEPTEQP---DSKTPQKRKLEEPEPEPKKAKVEDKDASKTAASLGAAGD 139 Query: 378 F----DCNICLDFAADPVVTLCGHLYCWPCI 458 F C +C++ DPV+ CGH +C CI Sbjct: 140 FAEELTCPLCVELFKDPVMVACGHNFCRSCI 170
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 35.8 bits (81), Expect = 0.091 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C H++C CI L+ Sbjct: 290 SISCQICEHILADPVETSCKHVFCRICILRCLK 322
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 35.8 bits (81), Expect = 0.091 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C H++C CI L+ Sbjct: 290 SISCQICEHILADPVETNCKHVFCRVCILRCLK 322
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 35.8 bits (81), Expect = 0.091 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +3 Query: 357 ATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEW 467 A A + +C +C +P+ T CGH++C C+ W Sbjct: 9 AEAVDPALECKLCGQVLEEPLCTPCGHVFCASCLLPW 45
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 35.8 bits (81), Expect = 0.091 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 C+IC DF V+T CGH +C CI ++L+ Sbjct: 32 CHICKDFLKASVLTPCGHSFCSICIRKYLQ 61
>TRI52_HUMAN (Q96A61) Tripartite motif protein 52 (RING finger protein 102)| Length = 297 Score = 35.8 bits (81), Expect = 0.091 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICLD+ DPV CGH +C C+ Sbjct: 20 CAICLDYFKDPVSISCGHNFCRGCV 44
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 35.8 bits (81), Expect = 0.091 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +3 Query: 306 VSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPS 479 + DNK+ K IS + C+ C + PVV CGH+YC C+ + S Sbjct: 176 LKDNKVSKQISKD----------DLLCSACKELLVRPVVLNCGHVYCEGCVVDMAEES 223 Score = 35.0 bits (79), Expect = 0.16 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYE 464 F C +CL+ P+V CGHL C+ C+++ Sbjct: 24 FLCCVCLELLYKPIVLSCGHLSCFWCVHK 52
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 35.8 bits (81), Expect = 0.091 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C H++C CI L+ Sbjct: 289 SISCQICEHILADPVETSCKHVFCRICILRCLK 321
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 35.8 bits (81), Expect = 0.091 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIY 461 C ICLD+ DPV CGH +C C++ Sbjct: 12 CPICLDYFQDPVSIECGHNFCRGCLH 37
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 35.8 bits (81), Expect = 0.091 Identities = 29/101 (28%), Positives = 39/101 (38%) Frame = +3 Query: 267 DQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYC 446 D V +A T S S M+ I G ++C ICL + V T CGH +C Sbjct: 34 DSVSGSASTGNLSSS---FMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFC 90 Query: 447 WPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSLVP 569 CI + +R A +CPV L + L P Sbjct: 91 KACIIKSIR------------DAGHKCPVDNEILLENQLFP 119
>TRI41_HUMAN (Q8WV44) Tripartite motif protein 41| Length = 630 Score = 35.4 bits (80), Expect = 0.12 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICLD+ DPV CGH +C C+ Sbjct: 20 CAICLDYFTDPVSIGCGHNFCRVCV 44
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 35.4 bits (80), Expect = 0.12 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE 464 C+ICL+ +PV T CGH +C C+ E Sbjct: 13 CSICLEPFKEPVTTPCGHNFCGSCLNE 39
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 35.4 bits (80), Expect = 0.12 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C +C DP+ T CGH++C C+ W+ Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPWV 46
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +3 Query: 381 DCNICLDFAADPVVTL-CGHLYCWPCIYEW 467 DC ICLD AA TL C H +C CI W Sbjct: 45 DCPICLDVAATEAQTLPCMHKFCLDCIQRW 74
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 35.4 bits (80), Expect = 0.12 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCI 458 +F C++C DF P++T C H +C CI Sbjct: 31 AFRCHVCKDFYDSPMLTSCNHTFCSLCI 58
>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1062 Score = 35.4 bits (80), Expect = 0.12 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C +C DP+ T CGH++C C+ W+ Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPWV 46
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNT 509 F C IC P+VT CGH +C C + R + A G T Sbjct: 251 FACIICKSSYKSPIVTKCGHYFCESCALQRYRKNPSCAACGAGT 294
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 35.4 bits (80), Expect = 0.12 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 C IC+ D +T CGH +C+ CI LR Sbjct: 52 CPICMQIIKDAFLTACGHSFCYMCIITHLR 81
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of| Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1066 Score = 35.4 bits (80), Expect = 0.12 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C +C DP+ T CGH++C C+ W+ Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPWV 46
>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24| Length = 405 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = +3 Query: 378 FDCNICLD-FAADPVVTLCGHLYCWPCIYEWLR--PSVVSATSGNN 506 F C IC ++ PVVT CGH +C C + R PS + SG N Sbjct: 308 FACIICRGPYSNSPVVTRCGHYFCEACALKRYRKDPSCAACGSGTN 353
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALS 551 C ICL+ DP++ C H C+ C + L S S S +A QCP + +S Sbjct: 10 CPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITA-FQCPTCRYVIS 64
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 35.0 bits (79), Expect = 0.16 Identities = 20/64 (31%), Positives = 28/64 (43%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSAD 557 ++C ICL + V T CGH +C CI + +R A +CPV L + Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIR------------DAGHKCPVDNEILLEN 115 Query: 558 SLVP 569 L P Sbjct: 116 QLFP 119
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 35.0 bits (79), Expect = 0.16 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C +C +DPV T C HL+C CI ++++ Sbjct: 291 SVSCLVCEHILSDPVQTSCKHLFCRICILKYIK 323
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ +P+ CGH +C CI SV R CPV + + +L Sbjct: 15 CPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVF------GQGGRSSCPVCRTSYQPGNL 68 Query: 564 VP 569 P Sbjct: 69 RP 70
>FANCL_HUMAN (Q9NW38) Ubiquitin ligase protein FANCL (EC 6.3.2.-) (Fanconi| anemia group L protein) (Fanconi anemia-associated polypeptide of 43 kDa) (FAAP43) Length = 375 Score = 35.0 bits (79), Expect = 0.16 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 13/77 (16%) Frame = +3 Query: 312 DNKLMKNISG----EMPATATAGSGSF--DCNICLDFAADPVV-------TLCGHLYCWP 452 +N +++N+ + PA A F DC IC + D + + CG + Sbjct: 277 ENSVLQNLKDVLEIDFPARAILEKSDFTMDCGICYAYQLDGTIPDQVCDNSQCGQPFHQI 336 Query: 453 CIYEWLRPSVVSATSGN 503 C+YEWLR + S S N Sbjct: 337 CLYEWLRGLLTSRQSFN 353
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALS 551 C ICL+ DP++ C H C+ C + L S S S +A QCP + +S Sbjct: 10 CPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITA-FQCPTCRYVIS 64
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 34.7 bits (78), Expect = 0.20 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C IC D PV T C H YC CI E+L Sbjct: 29 CYICKDLLNAPVRTQCDHTYCSQCIREFL 57
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 34.7 bits (78), Expect = 0.20 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +3 Query: 309 SDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPC 455 S ++ +N+ + + T F C IC DPVVT C H +C C Sbjct: 239 SSSRTRENMLSDPEDSDTEDDIPFACLICRKAFTDPVVTRCAHYFCSSC 287
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 34.7 bits (78), Expect = 0.20 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 C+ICL P+ T CGH +C+ C+ +L+ Sbjct: 50 CHICLQPLLQPLDTPCGHTFCYKCLRNFLQ 79
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 34.7 bits (78), Expect = 0.20 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNT 509 F C IC +P+VT CGH +C C + R + A G T Sbjct: 239 FACIICKKPYQNPIVTKCGHYFCESCALQRYRKNPSCAACGAGT 282
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 34.7 bits (78), Expect = 0.20 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = +3 Query: 351 ATATAGSGSF----DCNICLDFAADPVVTLCGHLYCWPCI 458 A++ +G F C +C++ DPV+ CGH +C CI Sbjct: 130 ASSLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCI 169
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 34.7 bits (78), Expect = 0.20 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C++C D +T+CGH++C C E L + ++CP SA+ L Sbjct: 639 CSVCSKNWKDTAITVCGHVFCLGCTQERL------------AARLRRCPTCNKGFSANDL 686 Query: 564 VPLY 575 + ++ Sbjct: 687 LSIH 690
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 34.3 bits (77), Expect = 0.26 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEW 467 F C+ C D +P CGH +C C+ W Sbjct: 32 FSCHCCYDILVNPTTLNCGHSFCRHCLALW 61
>ARI1_DROME (Q94981) Protein ariadne-1 (Ari-1)| Length = 503 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +3 Query: 360 TAGSGSFDCNICLD-FAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGNNTS-ARQQCP 530 T+ S +C IC D + L CGH +C PC +E+L +V+ G S A C Sbjct: 125 TSRSQCEECEICFSQLPPDSMAGLECGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCD 184 Query: 531 VWQAALSADSLV 566 + ++ +LV Sbjct: 185 ILVDDVTVANLV 196
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 34.3 bits (77), Expect = 0.26 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPC 455 C +C DPV+T CGH +C C Sbjct: 131 CQLCCSVFKDPVITTCGHTFCRRC 154
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 34.3 bits (77), Expect = 0.26 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C +CL+ +P++ CGH YC C+ R + + +CPV + + + S Sbjct: 16 CPVCLEVFKEPLMLQCGHSYCKGCLLSLSR----------HLDSELRCPVCRQEVDSSSS 65 Query: 564 VP 569 P Sbjct: 66 PP 67
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 34.3 bits (77), Expect = 0.26 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +3 Query: 384 CNIC-LDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C++C + D +++LCGH +C+ CI + + + +++CP+ A Sbjct: 627 CSVCNFERWKDRIISLCGHGFCYQCIQKRIE------------TRQRRCPICGRGFGASD 674 Query: 561 LVPLY 575 ++P++ Sbjct: 675 VIPIH 679
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 34.3 bits (77), Expect = 0.26 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPC 455 C +C DPV+T CGH +C C Sbjct: 55 CQLCCSVFKDPVITTCGHTFCRRC 78
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 33.9 bits (76), Expect = 0.35 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPC 455 F C +C + PVVT CGH +C C Sbjct: 197 FKCTLCKEDYKSPVVTNCGHYFCGSC 222
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ +P++ CGH YC C+ + + + +CPV + ++ S Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKNCL----------DSLSEHLDSELRCPVCRQSVDCSSS 65 Query: 564 VP 569 P Sbjct: 66 PP 67
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C++C D +T+CGH++C C E L + ++CP SA+ L Sbjct: 629 CSVCSKNWKDTAITVCGHVFCSKCTQERL------------AARLRRCPSCNRGFSANDL 676 Query: 564 VPLY 575 + ++ Sbjct: 677 LSIH 680
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 33.5 bits (75), Expect = 0.45 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVV-------TLCGHLYCWPCIYEWLRPSVVSATSGNNT 509 AT SG+ C IC+D ++ V T CGH++C C+ + L+ + T Sbjct: 121 ATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI 180 Query: 510 SARQQCPVW 536 + ++ P++ Sbjct: 181 NHKRYHPIY 189
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 33.5 bits (75), Expect = 0.45 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEW 467 F C+ C D +P CGH +C C+ W Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALW 61
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 33.5 bits (75), Expect = 0.45 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEW 467 F C+ C D +P CGH +C C+ W Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALW 61
>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)| Length = 861 Score = 33.5 bits (75), Expect = 0.45 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C IC + A D + + C H +C C+ E++ +A G N + CP LS D Sbjct: 609 CKICDEVAQDAIESRCHHTFCRLCVTEYIN----AAGDGENVN----CPSCFIPLSIDLS 660 Query: 564 VP 569 P Sbjct: 661 AP 662
>PEX12_ARATH (Q9M841) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 372 Score = 33.5 bits (75), Expect = 0.45 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +3 Query: 384 CNICLDFAADP-VVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C +CL A+P VVT+ G ++C+ C+++++ S ++CPV S D Sbjct: 318 CALCLQKRANPSVVTVSGFVFCYSCVFKYV-------------SKYKRCPVTLIPASVDQ 364 Query: 561 LVPLY 575 + L+ Sbjct: 365 IRRLF 369
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 33.5 bits (75), Expect = 0.45 Identities = 17/59 (28%), Positives = 29/59 (49%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C+ICL PV+ + H++C CI WL+ NN+ QCP + ++ ++ Sbjct: 18 CHICLGKVRQPVICINNHVFCSICIDLWLK---------NNS----QCPACRVPITPEN 63
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 33.5 bits (75), Expect = 0.45 Identities = 17/59 (28%), Positives = 29/59 (49%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C+ICL PV+ + H++C CI WL+ NN+ QCP + ++ ++ Sbjct: 18 CHICLGKVRQPVICINNHVFCSICIDLWLK---------NNS----QCPACRVPITPEN 63
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 33.5 bits (75), Expect = 0.45 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVV-------TLCGHLYCWPCIYEWLRPSVVSATSGNNT 509 AT SG+ C IC+D ++ V T CGH++C C+ + L+ + T Sbjct: 125 ATGPRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI 184 Query: 510 SARQQCPVW 536 + ++ P++ Sbjct: 185 NHKRYHPIY 193
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 33.5 bits (75), Expect = 0.45 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICLD PV CGH +C CI Sbjct: 16 CPICLDILQKPVTIDCGHNFCLKCI 40
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 33.5 bits (75), Expect = 0.45 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPCIY 461 PA A AGS + +C +CL+ D V+ C H C C + Sbjct: 215 PAPAFAGSEALECKVCLERQRDAVLLPCRHFCVCMQCYF 253
>RO52_HUMAN (P19474) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) Length = 475 Score = 33.1 bits (74), Expect = 0.59 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICLD +PV CGH +C CI Sbjct: 16 CPICLDPFVEPVSIECGHSFCQECI 40
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 33.1 bits (74), Expect = 0.59 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICL+ +P++ CGH YC C+ Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKDCL 40
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 33.1 bits (74), Expect = 0.59 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 +C ICL+ D V+T C H C C+ R ++TSG CPV + +S Sbjct: 793 ECPICLEALEDAVLTPCAHRLCRECLLASWR----NSTSG-------LCPVCRNTVSKQE 841 Query: 561 LV 566 L+ Sbjct: 842 LI 843
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 33.1 bits (74), Expect = 0.59 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 C+ICL P+ T CGH +C C+ +L+ Sbjct: 51 CHICLQPLLQPLDTPCGHTFCHKCLRNFLQ 80
>PEX2_RAT (P24392) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 32.7 bits (73), Expect = 0.77 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%) Frame = +3 Query: 300 PSVSDNKLMKNISGE-MPATATAGSGSF------DCNICLDFAADPVVTLCGHLYCWPCI 458 P ++ KL +S +P T+TAGS S +C +C ++ P C H++C+ C+ Sbjct: 209 PLINIQKLKAKLSSWCIPLTSTAGSDSTLGSSGKECALCGEWPTMPHTIGCEHVFCYYCV 268
>TRI34_HUMAN (Q9BYJ4) Tripartite motif protein 34 (Interferon-responsive finger| protein 1) (RING finger protein 21) Length = 488 Score = 32.7 bits (73), Expect = 0.77 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ +P+ CGH C CI +V + + + + CPV + S + L Sbjct: 15 CPICLELLTEPLSLDCGHSLCRACI------TVSNKEAVTSMGGKSSCPVCGISYSFEHL 68
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 32.7 bits (73), Expect = 0.77 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSV 482 C IC ++ + V C H +C CI EW++ V Sbjct: 406 CIICSEYFIEAVTLNCAHSFCSFCINEWMKRKV 438
>PEX12_DROME (Q9VPT5) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 297 Score = 32.7 bits (73), Expect = 0.77 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 1/97 (1%) Frame = +3 Query: 288 MTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVV-TLCGHLYCWPCIYE 464 + N ++ +L K + +P +C +CL P ++ G+++CW CI Sbjct: 219 LINPEAMPRKQLPKEVQQSLPQRG-------ECPVCLLSIQTPTACSVSGYVFCWKCI-- 269 Query: 465 WLRPSVVSATSGNNTSARQQCPVWQAALSADSLVPLY 575 VS + T CPV +S D LV +Y Sbjct: 270 ------VSHMKEHGT-----CPVTHYPISLDDLVRIY 295
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 32.7 bits (73), Expect = 0.77 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPC 455 F C IC PVVT CGH +C C Sbjct: 235 FACLICRQPFTQPVVTKCGHYFCMGC 260
>TRI45_HUMAN (Q9H8W5) Tripartite motif protein 45 (RING finger protein 99)| Length = 580 Score = 32.7 bits (73), Expect = 0.77 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Frame = +3 Query: 306 VSDNK--LMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP- 476 +S+N+ L+ +S TA SG C +CL P + C H C C+ E L P Sbjct: 1 MSENRKPLLGFVSKLTSGTALGNSGKTHCPLCLGLFKAPRLLPCLHTVCTTCL-EQLEPF 59 Query: 477 SVVSATSGNNTSARQ 521 SVV G++ ++ + Sbjct: 60 SVVDIRGGDSDTSSE 74
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 32.7 bits (73), Expect = 0.77 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C+ICL PVV H++C CI WL+ NN+ QCP + ++ ++ Sbjct: 18 CHICLGKVRQPVVCTNNHVFCSICIDLWLK---------NNS----QCPACRVPITPEN 63
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 32.7 bits (73), Expect = 0.77 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSV 482 C IC ++ + V C H +C CI EW++ + Sbjct: 403 CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKI 435
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 32.3 bits (72), Expect = 1.0 Identities = 15/62 (24%), Positives = 27/62 (43%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C ICL+ P+ CGH +C C+ + S++ CPV + + +++ Sbjct: 15 CPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-------KGESSCPVCRISYQPENI 67 Query: 564 VP 569 P Sbjct: 68 RP 69
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 F C IC +PVVT C H +C C E R Sbjct: 254 FRCFICRQAFQNPVVTKCRHYFCESCALEHFR 285
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNT 509 F C +C PVVT C H +C C + ++ S G T Sbjct: 169 FRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKVSTNCPICGKET 212
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 32.3 bits (72), Expect = 1.0 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSAD 557 F C +C + PV T CGH +C C ++ G NT A A Sbjct: 163 FKCVLCKESYERPVKTNCGHYFCQKCFVNRIKIDKSCFICGENTEG--------IAKMAT 214 Query: 558 SLVPL 572 LVP+ Sbjct: 215 DLVPM 219
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 32.3 bits (72), Expect = 1.0 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = +3 Query: 375 SFDCNICLDFAADPV----VTLCGHLYCWPCIYEWL 470 SF+C IC +P+ +T C H +C PC+ E++ Sbjct: 855 SFECAICTTECIEPLSAVSITECLHTFCEPCLAEYI 890
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 32.3 bits (72), Expect = 1.0 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICLD P + C H +C+PC+ Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCL 67
>ATL4D_ARATH (Q9M0R4) Putative RING-H2 finger protein ATL4D precursor| Length = 357 Score = 32.0 bits (71), Expect = 1.3 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Frame = +3 Query: 366 GSGSFDCNICLDFAADPV----VTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPV 533 G+G +C ICL D + C H + CI EWL S+R CPV Sbjct: 114 GNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWL-------------SSRSTCPV 160 Query: 534 WQAALSADS 560 +A LS S Sbjct: 161 CRANLSLKS 169
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCI 458 ++ MKN+ E+ C +CL+ PV CGH +C CI Sbjct: 3 SQFMKNLKEEVT-----------CPVCLNLMVKPVSADCGHTFCQGCI 39
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNT 509 DC IC + DP+VT C H +C C + + S NT Sbjct: 240 DCFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQNT 282
>NEUR_DROME (P29503) Protein neuralized| Length = 754 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +3 Query: 288 MTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPCIYE 464 + N + + NK ++S + ++A +C IC + D V+ +CGH+ C+ C E Sbjct: 674 IANSTNNAANKWKDSLSDQQSTDSSA-----ECTICYENPIDSVLYMCGHMCMCYDCAIE 728 Query: 465 WLR 473 R Sbjct: 729 QWR 731
>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24| Length = 256 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +3 Query: 351 ATATAGSGSFD-CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTS 512 AT+ A SG D C IC PVVT C H +C C + G NT+ Sbjct: 194 ATSRADSGIPDTCPICQGEFKSPVVTQCCHYFCEKCFLAKHKKKQNCFVCGKNTN 248
>TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Putative transcription factor XPRF) (Midin) (RING finger protein 59) (Midline 1 RING finger protein) Length = 667 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCP 530 C ICL+ DP++ C H C+ C + L + S + +A QCP Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITA-FQCP 57
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%) Frame = +3 Query: 354 TATAGSGSFDCNICLDFAADPVV-------TLCGHLYCWPCIYEWLRPSVVSATSGNNTS 512 T SG+ C IC+D ++ V T CGH++C C+ + L+ + T + Sbjct: 126 TGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 185 Query: 513 ARQQCPVW 536 ++ P++ Sbjct: 186 HKRYHPIY 193
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = +3 Query: 366 GSGSFDCNICLDFAADP----VVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCP 530 GS +C ICL+ D ++ +C HL+ CI WL +N +A+ P Sbjct: 117 GSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKP 175
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)| Length = 250 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPV-WQAALSADS 560 C ICL+ + ++ CGH YC C+ VS + +T R CP+ WQ + S Sbjct: 16 CPICLEVFKESLMLQCGHSYCKGCL--------VSLSYHLDTKVR--CPMCWQVVDGSSS 65 Query: 561 L 563 L Sbjct: 66 L 66
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPV-WQAALSADS 560 C ICL+ + ++ CGH YC C+ VS + +T R CP+ WQ + S Sbjct: 16 CPICLEVFKESLMLQCGHSYCKGCL--------VSLSYHLDTKVR--CPMCWQVVDGSSS 65 Query: 561 L 563 L Sbjct: 66 L 66
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +3 Query: 258 GGMDQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTL-CG 434 GG + N S S + L G+ +A S F+C +C D+ P++ G Sbjct: 49 GGSSSAGTTSSANTSSSSSSSLSSAGGGDAGMSADLTS-LFECPVCFDYVLPPILQCSSG 107 Query: 435 HLYCWPC 455 HL C C Sbjct: 108 HLVCVSC 114
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 312 DNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEW 467 D+ K I E+PA + C +C +DPV + C HL+C CI + Sbjct: 275 DHLSTKLIPTEVPADLIR---AVTCQVCDHLLSDPVQSPCRHLFCRLCIIRY 323
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQ 524 F C +C PV T CGH +C C +R + A G +T Q Sbjct: 156 FRCVLCRGHYRAPVRTRCGHYFCGGCFARRVRETRQCAVCGADTQGVAQ 204
>TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) (RING finger protein 76) Length = 513 Score = 31.6 bits (70), Expect = 1.7 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C +CL + A+P++ CGH C C+ Sbjct: 16 CPVCLQYFAEPMMLDCGHNICCACL 40
>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37| Length = 961 Score = 31.6 bits (70), Expect = 1.7 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = +3 Query: 378 FDCNICLDFAADP-VVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSA 554 F C IC++ D + C L C+ CI WL T R QCP +A L Sbjct: 13 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWL------------TEQRAQCPHCRAPLQL 60 Query: 555 DSLV 566 LV Sbjct: 61 RELV 64
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 31.6 bits (70), Expect = 1.7 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWL 470 S C +C ++PV + C HL+C CI +++ Sbjct: 307 SVTCQVCDHLLSEPVQSPCRHLFCRSCIAKYI 338
>ATL5H_ARATH (Q8LGA5) RING-H2 finger protein ATL5H precursor| Length = 368 Score = 31.6 bits (70), Expect = 1.7 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +3 Query: 354 TATAGSGSFDCNICL-DFAADPVVTL---CGHLYCWPCIYEWLRPSVVSATSGNNTSARQ 521 T G G+ +C ICL +F D + L C H++ CI WL+ V T+ + Sbjct: 114 TQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVC--RTNLAE 171 Query: 522 QCPVWQAALSAD 557 Q P + + D Sbjct: 172 QTPEPEVVVETD 183
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 F C IC +PVVT C H +C C + R Sbjct: 260 FKCFICRQTFQNPVVTKCRHYFCESCALQHFR 291
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 F C IC +PVVT C H +C C + R Sbjct: 260 FKCFICRQSFQNPVVTKCRHYFCESCALQHFR 291
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 31.6 bits (70), Expect = 1.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 379 CKICAENDKDVKIEPCGHLMCTSCLTSW 406
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 31.6 bits (70), Expect = 1.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 381 CKICAENDKDVKIEPCGHLMCTSCLTSW 408
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 31.6 bits (70), Expect = 1.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 386 CKICAENDKDVKIEPCGHLMCTSCLTSW 413
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 31.6 bits (70), Expect = 1.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSW 411
>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)| Length = 964 Score = 31.6 bits (70), Expect = 1.7 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = +3 Query: 378 FDCNICLDFAADP-VVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSA 554 F C IC++ D + C L C+ CI WL T R QCP +A L Sbjct: 13 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWL------------TEQRAQCPHCRAPLQL 60 Query: 555 DSLV 566 LV Sbjct: 61 RELV 64
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +3 Query: 357 ATAGSGSFDCNICLDFAADPVVTL---CGHLYCWPCIYEWL 470 A AG G C +C D A P+ C H +C PC+ W+ Sbjct: 117 AEAGGGGDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWI 157
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 31.6 bits (70), Expect = 1.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSW 411
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 31.2 bits (69), Expect = 2.2 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%) Frame = +3 Query: 345 MPATATAGSGSFD-----CNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSV 482 M GSG+ D C IC+ +D T+ C H +C+ CI W SV Sbjct: 1 MDTILAGGSGTSDASDNTCTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSV 52
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 31.2 bits (69), Expect = 2.2 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +3 Query: 300 PSVSDNKLMKNISGEMPATATAGSGSFDCNICLD-FAADPVVTLCGHLYCWPCIYEW 467 P +KL + + PA A+ S C ICLD F + C H +C+ C+ EW Sbjct: 82 PKAGTSKLQQTV----PADASPDS---KCPICLDRFDNVSYLDRCLHKFCFRCVQEW 131
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 31.2 bits (69), Expect = 2.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAW 400
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPC 455 C +CLD A V CGHL C C Sbjct: 252 CKVCLDRAVSIVFVPCGHLVCAEC 275
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 31.2 bits (69), Expect = 2.2 Identities = 17/64 (26%), Positives = 23/64 (35%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C IC + D + CGHL C C+ W S Q CP + + Sbjct: 351 CKICAESNKDVKIEPCGHLLCSCCLAAW------------QHSDSQTCPFCRCEIKGWEA 398 Query: 564 VPLY 575 V +Y Sbjct: 399 VSIY 402
>FMO1_RAT (P36365) Dimethylaniline monooxygenase [N-oxide-forming] 1 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 1) (FMO 1) (Dimethylaniline oxidase 1) Length = 532 Score = 31.2 bits (69), Expect = 2.2 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -1 Query: 427 RVTTGSAAKSRQMLQSKEPLPAVAVAG-ISPLMFFISLLSDTEGWLVMAAMQTWSIPPPS 251 +V G A+ + + + P P +AV G I PL I W+V ++PPPS Sbjct: 344 KVEDGQASLYKYIFPAHLPKPTLAVIGLIKPLGSMIPTGETQARWVVQVLKGATTLPPPS 403 Query: 250 IAIR 239 + ++ Sbjct: 404 VMMK 407
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 31.2 bits (69), Expect = 2.2 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +3 Query: 300 PSVSDNKLMKNISGEMPATATAGSGSFDCNICLD-FAADPVVTLCGHLYCWPCIYEW 467 P +KL + + PA A+ S C ICLD F + C H +C+ C+ EW Sbjct: 83 PKAGTSKLQQTV----PADASPDS---KCPICLDRFDNVSYLDRCLHKFCFRCVQEW 132
>ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc finger protein| RHA3a) Length = 185 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = +3 Query: 336 SGEMPATATAGSG-SFDCNICLDFAADP----VVTLCGHLYCWPCIYEWL 470 + E + A A G S +C ICL AD V+ LCGH + CI +WL Sbjct: 85 AAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWL 134
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEW 467 +C IC+D AD ++ C H +C CI +W Sbjct: 146 ECCICMDGKADLILP-CAHSFCQKCIDKW 173
>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor| Length = 2809 Score = 31.2 bits (69), Expect = 2.2 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +3 Query: 369 SGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQC 527 +GSF C+ F P +T C + PC E L+ S +S + R +C Sbjct: 2272 AGSFRCDCDEGFQPSPTLTECHDIRQGPCFAEVLQTMCRSLSSSSEAVTRAEC 2324
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEW 467 +C IC+D AD ++ C H +C CI +W Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW 181
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEW 467 +C IC+D AD ++ C H +C CI +W Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW 181
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEW 467 +C IC+D AD ++ C H +C CI +W Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW 181
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEW 467 +C IC+D AD ++ C H +C CI +W Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW 181
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 31.2 bits (69), Expect = 2.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAW 400
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 31.2 bits (69), Expect = 2.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAW 400
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVS 488 C ICLD + V T C HL+C C+ + + VS Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVS 46
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +3 Query: 309 SDNKLMKNISGEMPATATAGSGSF-DCNICLDFAADPVVTLCGHLYCWPCI 458 S N L N + TA S + +C ICL PV C H++C+ C+ Sbjct: 12 SINMLPTNKKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV 62
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +3 Query: 309 SDNKLMKNISGEMPATATAGSGSF-DCNICLDFAADPVVTLCGHLYCWPCI 458 S N L N + TA S + +C ICL PV C H++C+ C+ Sbjct: 11 SINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV 61
>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 30.8 bits (68), Expect = 2.9 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C ICL+ DP++ C H C+ C + L Sbjct: 10 CPICLELLEDPLLLPCAHSLCFNCAHRIL 38
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +3 Query: 309 SDNKLMKNISGEMPATATAGSGSF-DCNICLDFAADPVVTLCGHLYCWPCI 458 S N L N + TA S + +C ICL PV C H++C+ C+ Sbjct: 10 SINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV 60
>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)| Length = 544 Score = 30.8 bits (68), Expect = 2.9 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%) Frame = +3 Query: 384 CNICLDFA---ADP------VVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVW 536 C IC++ ADP ++ C H YC CI W SAT N ++ CP Sbjct: 347 CGICMEVVYEKADPTDRRFGILFSCNHTYCLRCIRRWR-----SATQFENRISK-SCP-- 398 Query: 537 QAALSADSLVP 569 Q +S+ ++P Sbjct: 399 QCRVSSGFVIP 409
>ZN179_HUMAN (Q9ULX5) Zinc finger protein 179 (Brain finger protein) (RING| finger protein 112) Length = 632 Score = 30.8 bits (68), Expect = 2.9 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPC 455 C+ICL+ DP+ CGH +C C Sbjct: 57 CSICLERLRDPISLDCGHDFCIRC 80
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/64 (23%), Positives = 28/64 (43%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C++C D V+ CGH++C C E L + ++CP S++ L Sbjct: 591 CSLCSKNWKDTVIKTCGHVFCADCCKERL------------AARMRKCPTCNKGFSSNDL 638 Query: 564 VPLY 575 + ++ Sbjct: 639 LVVH 642
>ATL3A_ARATH (Q9SRQ8) RING-H2 finger protein ATL3A| Length = 356 Score = 30.4 bits (67), Expect = 3.8 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 4/91 (4%) Frame = +3 Query: 312 DNKLMKNISGEMPATATAGSGSFDCNICL-DFAADPVVTL---CGHLYCWPCIYEWLRPS 479 D L+K+I+ S DC++CL +F + + L C H + PCI WL+ Sbjct: 135 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK-- 192 Query: 480 VVSATSGNNTSARQQCPVWQAALSADSLVPL 572 + CP+ +A + S V + Sbjct: 193 -----------SHSNCPLCRAFIVTSSAVEI 212
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVS 488 C IC + + V T CGHL+C C+ + + + S Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS 48
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Frame = +3 Query: 375 SFDCNICLDFAAD---PVVTLCGHLYCWPCIYEWL 470 S +C+IC D + T CGH +C C++E++ Sbjct: 911 SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYI 945
>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger| protein ATL6) Length = 398 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Frame = +3 Query: 354 TATAGSGSFDCNICL-DFAADPVVTL---CGHLYCWPCIYEWLRPSVVSATSGNNTSARQ 521 T G G +C ICL +F D + L C H++ CI WL V Sbjct: 118 TQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVT------------ 165 Query: 522 QCPVWQAALS 551 CPV +A L+ Sbjct: 166 -CPVCRANLA 174
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVS 488 C IC + + V T CGHL+C C+ + + + S Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASAS 48
>PEX12_PICPA (Q01961) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome| assembly protein PAS10) Length = 409 Score = 30.4 bits (67), Expect = 3.8 Identities = 13/50 (26%), Positives = 25/50 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPV 533 C +C +P V G+++C+ CI++ L S + +G +CP+ Sbjct: 339 CPLCHKQITNPAVIETGYVFCYTCIFKHLTSSELDEETGG------RCPI 382
>TRI18_RAT (P82458) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 30.4 bits (67), Expect = 3.8 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C ICL+ DP++ C H C+ C + L Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRIL 38
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCI 458 A+ T+ + +C IC +PV CGH +C C+ Sbjct: 5 ASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACL 40
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCI 458 A+ T+ + +C IC +PV CGH +C C+ Sbjct: 5 ASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACL 40
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 30.4 bits (67), Expect = 3.8 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCI 458 +C ICL PV C H++C+ C+ Sbjct: 35 ECAICLQTCVHPVSLPCKHVFCYLCV 60
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 C+ICLD P V C H +C C+ ++ P Sbjct: 22 CSICLDRYRCPKVLPCLHTFCERCLQNYIPP 52
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRP 476 C+ICLD P V C H +C C+ ++ P Sbjct: 22 CSICLDRYRCPKVLPCLHTFCERCLQNYIPP 52
>NEUR_DROVI (Q24746) Protein neuralized| Length = 747 Score = 30.4 bits (67), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHL-YCWPCIYEWLR 473 S +C IC + D V+ +CGH+ C+ C E R Sbjct: 691 SAECTICYENPIDSVLYMCGHMCMCYDCAIEQWR 724
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 30.4 bits (67), Expect = 3.8 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRIY 999
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 30.4 bits (67), Expect = 3.8 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRIY 999
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 30.4 bits (67), Expect = 3.8 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRIY 999
>TRI10_PIG (O19085) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 482 Score = 30.4 bits (67), Expect = 3.8 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWL 470 A+ ++ + +C IC +PV CGH +C C+ +L Sbjct: 5 ASVSSLADEVNCPICQGTLREPVTIDCGHNFCCVCLTRYL 44
>TRI18_MOUSE (O70583) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Midin) Length = 680 Score = 30.4 bits (67), Expect = 3.8 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C ICL+ DP++ C H C+ C + L Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRIL 38
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 30.4 bits (67), Expect = 3.8 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYE 464 F C +C P+ T CGH++C C + Sbjct: 154 FKCVLCKSDYKSPIKTECGHIFCKACFLD 182
>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Liver regeneration-related protein LRRG126) Length = 774 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVS 488 +F C C + PV T+C H C C+ R V S Sbjct: 702 AFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFS 739
>TRI27_MOUSE (Q62158) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) Length = 513 Score = 30.0 bits (66), Expect = 5.0 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C +CL + +P++ CGH C C+ Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACL 40
>DDX51_HUMAN (Q8N8A6) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 666 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 Query: 189 RNPIRTRAAAQGSLASENRARGRRETIGEIAGAGSRRPAWGRRKKMD 49 R P +T AAA A+ R R RR A GS G+R+K D Sbjct: 49 REPAQTEAAASTEPATRRRRRPRRRRRVNDAEPGSPEAPQGKRRKAD 95
>ATL3G_ARATH (Q67YI6) RING-H2 finger protein ATL3G| Length = 411 Score = 30.0 bits (66), Expect = 5.0 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Frame = +3 Query: 336 SGEMPATATAGSGSFDCNICL-DFAADPVVT---LCGHLYCWPCIYEWLRPSVVSATSGN 503 +G+ T+ + DC +CL +F V LC H + CI EWLR Sbjct: 140 TGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLR---------- 189 Query: 504 NTSARQQCPVWQAAL--SADSLVPL 572 + CP+ + A+ SA L P+ Sbjct: 190 ---SHPNCPLCRTAILGSAGVLTPM 211
>MKRN2_BRARE (Q9DFG8) Makorin-2| Length = 414 Score = 30.0 bits (66), Expect = 5.0 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 15/85 (17%) Frame = +3 Query: 258 GGMDQVCMAAMTN-----QPSVSDNKLMKNISGEMP-ATATAGSGSFDCNICLDFAADP- 416 G M ++C + + Q + + K M +M A A S C ICLD + Sbjct: 189 GEMCEICRQHVLHPHDPEQRAAHEKKCMVAFEMDMERAFAVQQSQDKVCKICLDVVYEKS 248 Query: 417 --------VVTLCGHLYCWPCIYEW 467 +++ C H YC CI +W Sbjct: 249 SPSERRFGILSSCAHTYCLNCIRQW 273
>ATL5E_ARATH (Q9FL42) Putative RING-H2 finger protein ATL5E| Length = 159 Score = 30.0 bits (66), Expect = 5.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = +3 Query: 384 CNICL-DFAA-DPV--VTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALS 551 C+ICL D+ A +PV + C H + C+ EWLR S N+ + + A Sbjct: 94 CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPS------RLATP 147 Query: 552 ADSLVPL 572 LVPL Sbjct: 148 LSDLVPL 154
>FMO1_MOUSE (P50285) Dimethylaniline monooxygenase [N-oxide-forming] 1 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 1) (FMO 1) (Dimethylaniline oxidase 1) Length = 532 Score = 30.0 bits (66), Expect = 5.0 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -1 Query: 427 RVTTGSAAKSRQMLQSKEPLPAVAVAG-ISPLMFFISLLSDTEGWLVMAAMQTWSIPPPS 251 +V G A+ + + + P P +AV G I PL + W+V ++PPPS Sbjct: 344 KVEDGQASLYKYIFPAHLPKPTLAVIGLIKPLGSMVPTGETQARWVVQVLKGATTLPPPS 403 Query: 250 I 248 + Sbjct: 404 V 404
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 30.0 bits (66), Expect = 5.0 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP AA A Sbjct: 949 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 996 Query: 564 VPLY 575 +Y Sbjct: 997 HRVY 1000
>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G| Length = 362 Score = 30.0 bits (66), Expect = 5.0 Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Frame = +3 Query: 216 ELSATDSILIAMEGGGMDQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNIC 395 + S+++++ + G G TN ++++ ++K+I+ + DC++C Sbjct: 87 QTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES-MIKSITVYKYKSGDGFVDGSDCSVC 145 Query: 396 L-DFAADPVVTL---CGHLYCWPCIYEWLR 473 L +F + + L C H + PCI WL+ Sbjct: 146 LSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) Length = 782 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVS 488 +F C C + PV T+C H C C+ R V S Sbjct: 710 AFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFS 747
>RNF41_XENLA (Q5FWL3) RING finger protein 41| Length = 317 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = +3 Query: 384 CNICLDFAADPV-VTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C IC +PV C H +C CI +W S +Q CPV ++ ++ Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWF-------------SQQQTCPVDRSVVTVAH 64 Query: 561 LVPL 572 L P+ Sbjct: 65 LRPV 68
>RNF41_MOUSE (Q8BH75) RING finger protein 41| Length = 317 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = +3 Query: 384 CNICLDFAADPV-VTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C IC +PV C H +C CI +W S +Q CPV ++ ++ Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWF-------------SQQQTCPVDRSVVTVAH 64 Query: 561 LVPL 572 L P+ Sbjct: 65 LRPV 68
>RNF41_HUMAN (Q9H4P4) RING finger protein 41| Length = 317 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = +3 Query: 384 CNICLDFAADPV-VTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADS 560 C IC +PV C H +C CI +W S +Q CPV ++ ++ Sbjct: 18 CPICSGVLEEPVQAPHCEHAFCNACITQWF-------------SQQQTCPVDRSVVTVAH 64 Query: 561 LVPL 572 L P+ Sbjct: 65 LRPV 68
>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box| domain protein 14) Length = 632 Score = 30.0 bits (66), Expect = 5.0 Identities = 28/104 (26%), Positives = 39/104 (37%) Frame = +3 Query: 264 MDQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLY 443 +D V M + PS + ++ S +P F C I L+ DPV+ G Y Sbjct: 221 VDFVTMESSDPDPSTGSRIVSRHRSPVIPEY-------FRCPISLELMKDPVIVSTGQTY 273 Query: 444 CWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSLVPLY 575 I +WL +G+ T CP Q L L P Y Sbjct: 274 ERSSIQKWL-------DAGHKT-----CPKSQETLLHAGLTPNY 305
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5| protein 24) (Cell cycle control protein cwf24) Length = 533 Score = 30.0 bits (66), Expect = 5.0 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNT 509 F C IC P+ T CGH +C C R + G +T Sbjct: 252 FVCLICKKDYRSPIATTCGHHFCEQCAITRYRKTPTCIQCGADT 295
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 30.0 bits (66), Expect = 5.0 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRVY 999
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 29.6 bits (65), Expect = 6.5 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C +C +PV+ CGH +C CI Sbjct: 162 CPLCRSLFKEPVILECGHNFCKHCI 186
>SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| homolog) (SmSINA) Length = 371 Score = 29.6 bits (65), Expect = 6.5 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = +3 Query: 378 FDCNICLDFAADPVVTL-CGHLYCWPC 455 F+C +C+D+A P++ GH+ C C Sbjct: 124 FECPVCMDYALPPIMQCQSGHIVCASC 150
>RNF37_MOUSE (Q925F4) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (UbcM4-interacting protein 5) (U-box domain-containing protein 5) Length = 539 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +3 Query: 309 SDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSVV 485 S ++ +++SG A+ S+ N +PV L CGHL C PC+ E R + Sbjct: 468 SSSEHPRSVSGPECASCKQAFSSYSTN-------EPVYQLPCGHLLCRPCLSEKQRSQPM 520 Query: 486 SATS 497 T+ Sbjct: 521 MCTA 524
>PEX2_MOUSE (P55098) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 29.6 bits (65), Expect = 6.5 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +3 Query: 357 ATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCI 458 +T GS +C +C ++ P C H++C+ C+ Sbjct: 235 STLGSSGKECALCGEWPTMPHTIGCEHVFCYYCV 268
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 29.6 bits (65), Expect = 6.5 Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 12/137 (8%) Frame = +3 Query: 84 ATQLPQSPR-SFLAAPSLDSRRPATPGRRRACGLD---SFPVP*VLQPELSATDSILIAM 251 AT +P+ P S P L P P + GL+ P P V+ ELS ++ A+ Sbjct: 427 ATVVPELPGPSVTPVPQLSQELPGPPAP--SMGLEPPQEVPEPPVMAQELSGVPAVSAAI 484 Query: 252 EGGGMDQVCMAAMTNQPSVSDNKLMKNI---SGEMP-----ATATAGSGSFDCNICLDFA 407 E G V +A + V+ + + + + E P TAT G + + L+ Sbjct: 485 ELTGQPAVTVAMELTEQPVTTTEFEQPVAMTTVEHPGHPEVTTATGLLGQPEAAMVLELP 544 Query: 408 ADPVVTLCGHLYCWPCI 458 PV T L P + Sbjct: 545 GQPVATTALELSGQPSV 561
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 29.6 bits (65), Expect = 6.5 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEW 467 C IC + D + CGHL C C+ W Sbjct: 350 CKICAERDKDVRIEPCGHLLCSCCLAAW 377
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 29.6 bits (65), Expect = 6.5 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +3 Query: 384 CNICLDFAADPVVTL-CGHLYCWPCIYEWLR 473 C ICL+ ++ + L C H +C+ CI W+R Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIR 38
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 29.6 bits (65), Expect = 6.5 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +3 Query: 384 CNICLDFAADPVVTL-CGHLYCWPCIYEWLR 473 C ICL+ ++ + L C H +C+ CI W+R Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIR 38
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 29.6 bits (65), Expect = 6.5 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVS 488 +F C C + P+ T+C H C C+ R V S Sbjct: 721 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFS 758
>RAD5_CRYNE (Q5KPG8) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1198 Score = 29.6 bits (65), Expect = 6.5 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C +C + D V+ C H C CI EW+ Sbjct: 920 CELCSNEMFDEVLLPCYHRSCQDCIVEWI 948
>RNF37_HUMAN (O94941) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (U-box domain-containing protein 5) Length = 541 Score = 29.6 bits (65), Expect = 6.5 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Frame = +3 Query: 348 PATATAGSGSF---DCNICLD-----FAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSG 500 P T + GS +C C F +PV L CGHL C PC+ E R ++ T+ Sbjct: 468 PGTGSEQPGSILGPECASCKRVFSPYFKKEPVYQLPCGHLLCRPCLGEKQRSLPMTCTAC 527 Query: 501 NNTSARQ 521 A Q Sbjct: 528 QRPVASQ 534
>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein| ATL16) Length = 375 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Frame = +3 Query: 375 SFDCNICLDFAADP----VVTLCGHLYCWPCIYEWLRPSVVSATSGNNTSARQQCPVWQA 542 S +C++CL D ++ C HL+ CI WL+ NN + CP+ + Sbjct: 135 SQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQ---------NNAN----CPLCRT 181 Query: 543 ALSADSLVP 569 +S D+ P Sbjct: 182 RVSCDTSFP 190
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 29.6 bits (65), Expect = 6.5 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEW 467 +C IC+D D ++ C H +C CI +W Sbjct: 154 ECCICMDGRVDLILP-CAHSFCQKCIDKW 181
>CEPU1_CHICK (Q90773) Protein CEPU-1 precursor| Length = 353 Score = 29.6 bits (65), Expect = 6.5 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Frame = +3 Query: 207 LQPELSATDSILIAMEGGGMDQVCMAAMTNQPSVSDNKLMKNISG--------EMPATAT 362 + P+++ T S + EGG + C+A P+++ + G E+ Sbjct: 132 VSPKITETSSDISINEGGNVSLTCIATGRPDPTITWRHISPKAVGFISEDEYLEITGITR 191 Query: 363 AGSGSFDCNICLDFAADPVV 422 SG ++C+ D AA PVV Sbjct: 192 EQSGEYECSASNDVAA-PVV 210
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/87 (21%), Positives = 35/87 (40%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSAT 494 NK + N S E T C IC + + + CGHL+C C+ + + Sbjct: 632 NKALSNSSEEEEMLRTFAL----CTICRNNFKNTALKTCGHLFCNQCVDDRI-------- 679 Query: 495 SGNNTSARQQCPVWQAALSADSLVPLY 575 ++ ++CP A ++P++ Sbjct: 680 ----SNRMRKCPTCSRAFDKMDVMPVH 702 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,750,967 Number of Sequences: 219361 Number of extensions: 1695135 Number of successful extensions: 5521 Number of sequences better than 10.0: 263 Number of HSP's better than 10.0 without gapping: 5302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5517 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
