ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart10d04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473273.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 762 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 108 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 167 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 168 tctctactgctggccttgcatctatgagtggct 200
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 43815 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 43756 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 43755 tctctactgctggccttgcatctatgagtggct 43723
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 26506928 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 26506869 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 26506868 tctctactgctggccttgcatctatgagtggct 26506836
>dbj|AK104359.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B09, full insert sequence Length = 1153 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 315 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 374 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 375 tctctactgctggccttgcatctatgagtggct 407
>dbj|AK070732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063I18, full insert sequence Length = 1220 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 376 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 435 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 436 tctctactgctggccttgcatctatgagtggct 468
>dbj|AK065326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F03, full insert sequence Length = 3579 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 1994 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 2053 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 2054 tctctactgctggccttgcatctatgagtggct 2086
>emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B1011H02, complete sequence Length = 40167 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 5748 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 5689 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 5688 tctctactgctggccttgcatctatgagtggct 5656
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 377 ctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgtggcca 436 ||||||||||||||| ||||| || || || ||||| || || ||||| |||||||| || Sbjct: 147568 ctttgactgcaacatttgccttgattttgcagcagagccggtggttactctttgtggtca 147509 Query: 437 tctgtactgctggccttgcatctacgagtggct 469 ||| |||||||||||||||||||| |||||||| Sbjct: 147508 tctctactgctggccttgcatctatgagtggct 147476
>ref|XM_466971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1462 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 372 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 431 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 501 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 560 Query: 432 ggccatctgtactgctggccttgcatctacgagtggctgc 471 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 561 ggccacctctactgctggccctgcatctacgagtggctgc 600
>ref|XM_506883.1| PREDICTED Oryza sativa (japonica cultivar-group), P0010C01.23-1 mRNA Length = 2039 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 372 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 431 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 1016 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 1075 Query: 432 ggccatctgtactgctggccttgcatctacgagtggctgc 471 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 1076 ggccacctctactgctggccctgcatctacgagtggctgc 1115
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 372 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 431 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 25691068 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 25691009 Query: 432 ggccatctgtactgctggccttgcatctacgagtggctgc 471 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 25691008 ggccacctctactgctggccctgcatctacgagtggctgc 25690969
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 372 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 431 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 93744 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 93685 Query: 432 ggccatctgtactgctggccttgcatctacgagtggctgc 471 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 93684 ggccacctctactgctggccctgcatctacgagtggctgc 93645
>dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F11, full insert sequence Length = 2038 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 372 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 431 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 1016 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 1075 Query: 432 ggccatctgtactgctggccttgcatctacgagtggctgc 471 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 1076 ggccacctctactgctggccctgcatctacgagtggctgc 1115
>dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063D05, full insert sequence Length = 1462 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 372 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 431 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 500 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 559 Query: 432 ggccatctgtactgctggccttgcatctacgagtggctgc 471 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 560 ggccacctctactgctggccctgcatctacgagtggctgc 599
>dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F10, full insert sequence Length = 2935 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 372 ggctcctttgactgcaacatctgcctcgacttcgctgcagatccagtcgttaccctttgt 431 |||| ||| ||||||||||||||||| || ||||| | || || || || ||||| || Sbjct: 2635 ggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgc 2694 Query: 432 ggccatctgtactgctggccttgcatctacgagtggctgc 471 ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 2695 ggccacctctactgctggccctgcatctacgagtggctgc 2734
>ref|NM_189106.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1874 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1084 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1143
>ref|XM_507140.1| PREDICTED Oryza sativa (japonica cultivar-group), P0577B11.136 mRNA Length = 1953 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1158 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1217
>gb|AY129244.1| Populus x canescens putative RING protein (RING) mRNA, complete cds Length = 1003 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 414 ccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 ||||| || ||||| |||||||| || ||||||||||| ||||||||| ||||||| Sbjct: 277 ccagtagtcaccctctgtggccacctctactgctggccctgcatctacaagtggct 332
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 3680508 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 3680449
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 4005 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 3946
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 159014 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 158955
>dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D12, full insert sequence Length = 1874 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1084 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1143
>dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G17, full insert sequence Length = 2524 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1146 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1087
>dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G04, full insert sequence Length = 1952 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 410 agatccagtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 |||||| || ||||||| ||||||||| || | ||||||||||||||| ||| ||||||| Sbjct: 1157 agatcctgtggttaccccttgtggccacctcttctgctggccttgcatataccagtggct 1216
>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the 3' end of a novel gene (FLJ22153) and the 3' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel), complete sequence Length = 181311 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 accttctcctcccccacctcct 41 |||||||||||||||||||||| Sbjct: 19598 accttctcctcccccacctcct 19577
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 ccctgggcggcggcgcgcgtgc 176 |||||||||||||||||||||| Sbjct: 1349871 ccctgggcggcggcgcgcgtgc 1349892
>gb|AC123673.7| Mus musculus chromosome 1, clone RP23-258D13, complete sequence Length = 191401 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 accttctcctcccccacctcc 40 ||||||||||||||||||||| Sbjct: 49270 accttctcctcccccacctcc 49290
>ref|NM_125010.2| Arabidopsis thaliana WRKY2; transcription factor AT5G56270 (WRKY2) mRNA, complete cds Length = 2798 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctcct 41 ||||||||||||||||||||| Sbjct: 1940 ccttctcctcccccacctcct 1920
>ref|XM_493842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gcgacccctgggcggcggcgc 170 ||||||||||||||||||||| Sbjct: 163 gcgacccctgggcggcggcgc 143
>ref|NM_191378.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1683 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 417 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 1120 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 1172
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ttctcctcccccacctccttc 43 ||||||||||||||||||||| Sbjct: 172631 ttctcctcccccacctccttc 172651
>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216676 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctcct 41 ||||||||||||||||||||| Sbjct: 59000 ccttctcctcccccacctcct 58980
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gcgacccctgggcggcggcgc 170 ||||||||||||||||||||| Sbjct: 9675969 gcgacccctgggcggcggcgc 9675949
>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence Length = 209579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cccaccttctcctcccccacc 37 ||||||||||||||||||||| Sbjct: 151655 cccaccttctcctcccccacc 151635
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gcgacccctgggcggcggcgc 170 ||||||||||||||||||||| Sbjct: 96868 gcgacccctgggcggcggcgc 96848
>gb|AY123006.1| Arabidopsis thaliana putative transcription factor NtWRKY4 (At5g56270) mRNA, complete cds Length = 2095 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctcct 41 ||||||||||||||||||||| Sbjct: 1337 ccttctcctcccccacctcct 1317
>gb|AY096493.1| Arabidopsis thaliana putative transcription factor NtWRKY4 (At5g56270) mRNA, complete cds Length = 2739 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctcct 41 ||||||||||||||||||||| Sbjct: 1931 ccttctcctcccccacctcct 1911
>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence Length = 190293 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cccaccttctcctcccccacc 37 ||||||||||||||||||||| Sbjct: 45275 cccaccttctcctcccccacc 45255
>gb|AF418308.1|AF418308 Arabidopsis thaliana WRKY transcription factor 2 (WRKY2) mRNA, complete cds Length = 2064 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctcct 41 ||||||||||||||||||||| Sbjct: 1337 ccttctcctcccccacctcct 1317
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gcgacccctgggcggcggcgc 170 ||||||||||||||||||||| Sbjct: 9674090 gcgacccctgggcggcggcgc 9674070
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 417 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 32270752 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 32270700 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 428 ttgtggccatctgtactgctggccttgc 455 |||||||||||| | ||||||||||||| Sbjct: 35509781 ttgtggccatctcttctgctggccttgc 35509754 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 aagctgatgaagaacatcag 337 |||||||||||||||||||| Sbjct: 27002612 aagctgatgaagaacatcag 27002593
>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctcct 41 ||||||||||||||||||||| Sbjct: 5512 ccttctcctcccccacctcct 5532
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 417 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 141505 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 141453
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 417 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 3037 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 2985
>dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK23 Length = 9670 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctcct 41 ||||||||||||||||||||| Sbjct: 5018 ccttctcctcccccacctcct 4998
>dbj|AK104514.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B01, full insert sequence Length = 1090 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gcgacccctgggcggcggcgc 170 ||||||||||||||||||||| Sbjct: 266 gcgacccctgggcggcggcgc 246
>dbj|AK102161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086G07, full insert sequence Length = 1124 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gcgacccctgggcggcggcgc 170 ||||||||||||||||||||| Sbjct: 289 gcgacccctgggcggcggcgc 269
>dbj|AK070278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F08, full insert sequence Length = 1579 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 417 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 733 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 785
>dbj|AK069471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M16, full insert sequence Length = 1382 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 417 gtcgttaccctttgtggccatctgtactgctggccttgcatctacgagtggct 469 ||||| ||||| || ||||| || | ||||||||| ||| ||||||||||||| Sbjct: 471 gtcgtcaccctctgcggccacctcttctgctggccgtgcctctacgagtggct 523
>dbj|AK061166.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A08, full insert sequence Length = 1122 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 gcgacccctgggcggcggcgc 170 ||||||||||||||||||||| Sbjct: 288 gcgacccctgggcggcggcgc 268
>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence Length = 201762 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 tcccaccttctcctcccccacctccttct 44 |||| |||||||||||||| ||||||||| Sbjct: 25637 tccccccttctcctccccctcctccttct 25665
>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence Length = 225973 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 tcccaccttctcctcccccacctccttct 44 |||| |||||||||||||| ||||||||| Sbjct: 147846 tccccccttctcctccccctcctccttct 147874
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gggcggcggcgcgcgtgcgg 178 |||||||||||||||||||| Sbjct: 16728 gggcggcggcgcgcgtgcgg 16709
>ref|NM_120338.2| Arabidopsis thaliana metal ion binding AT5G02600 transcript variant AT5G02600.1 mRNA, complete cds Length = 1613 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 719 ctcctcccccacctccttct 738
>ref|NM_202994.1| Arabidopsis thaliana metal ion binding AT5G02600 transcript variant AT5G02600.2 mRNA, complete cds Length = 1326 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 719 ctcctcccccacctccttct 738
>gb|AC164069.9| Mus musculus chromosome 15, clone RP23-422H17, complete sequence Length = 216364 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 catcttcttcctccgccccc 71 |||||||||||||||||||| Sbjct: 3912 catcttcttcctccgccccc 3893
>gb|AC125273.9| Mus musculus chromosome 1, clone RP24-156N4, complete sequence Length = 187198 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 140479 ccttctcctccccctcctccttct 140502
>ref|XM_423309.1| PREDICTED: Gallus gallus similar to N-WASP protein (LOC425556), partial mRNA Length = 870 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaccttctcctcccccacctcct 41 |||||||||||||| ||||||||| Sbjct: 28 ccaccttctcctccaccacctcct 51
>ref|XM_360550.1| Magnaporthe grisea 70-15 hypothetical protein (MG10862.4) partial mRNA Length = 3780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gggcggcggcgcgcgtgcgg 178 |||||||||||||||||||| Sbjct: 2758 gggcggcggcgcgcgtgcgg 2739
>ref|XM_419728.1| PREDICTED: Gallus gallus similar to Bcl-2-associated transcription factor short form (LOC421691), mRNA Length = 4685 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||||| ||||||| Sbjct: 4008 ccttctcctcccccacttccttct 4031
>gb|AC142270.4| Mus musculus BAC clone RP24-115G23 from chromosome 3, complete sequence Length = 170870 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctcc 40 |||||||||||||||||||| Sbjct: 111470 ccttctcctcccccacctcc 111489
>gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chromosome 19, complete sequence Length = 180482 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 ||||||||||| |||||||||||| Sbjct: 28037 ccttctcctcctccacctccttct 28014
>ref|XM_956464.1| Neurospora crassa OR74A hypothetical protein (NCU01191.1) partial mRNA Length = 867 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 catcccaccttctcctcccccacc 37 |||||||||| ||||||||||||| Sbjct: 756 catcccacctcctcctcccccacc 733
>ref|XM_326683.1| Neurospora crassa OR74A hypothetical protein (NCU01191.1) partial mRNA Length = 867 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 catcccaccttctcctcccccacc 37 |||||||||| ||||||||||||| Sbjct: 756 catcccacctcctcctcccccacc 733
>gb|AC131721.4| Mus musculus BAC clone RP23-142L24 from chromosome 15, complete sequence Length = 230892 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catcttcttcctccgccccc 71 |||||||||||||||||||| Sbjct: 22799 catcttcttcctccgccccc 22818
>gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosome 7, complete sequence Length = 232468 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ccaccttctcctcccccacctcct 41 ||||||||||||| |||||||||| Sbjct: 125062 ccaccttctcctctcccacctcct 125039
>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence Length = 143758 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 113036 ccttctcctccccctcctccttct 113013
>ref|XM_917417.1| PREDICTED: Mus musculus similar to eukaryotic translation initiation factor 5A (LOC640461), mRNA Length = 231 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ttgactgcaacatctgcctc 398 |||||||||||||||||||| Sbjct: 215 ttgactgcaacatctgcctc 196
>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete sequence Length = 207863 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 88163 ccttctcctccccctcctccttct 88186
>emb|BX547934.18| Zebrafish DNA sequence from clone DKEY-161J23 in linkage group 24, complete sequence Length = 174457 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 tctgcaacagatagcatcct 241 |||||||||||||||||||| Sbjct: 903 tctgcaacagatagcatcct 922
>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete sequence Length = 166747 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 5524 ccttctcctccccctcctccttct 5547
>gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosome 9, complete sequence Length = 166272 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 ||||||||||| |||||||||||| Sbjct: 49945 ccttctcctcctccacctccttct 49968
>gb|AC125065.3| Mus musculus BAC clone RP23-430G6 from chromosome 5, complete sequence Length = 205734 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 64107 ccttctcctccccctcctccttct 64084
>gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome 2, complete sequence Length = 206592 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 199449 ccttctcctccccctcctccttct 199472
>emb|CR456637.3| Platypus DNA sequence from clone XX-104A18, complete sequence Length = 110477 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||| ||||||||||| Sbjct: 26205 ccttctcctccctcacctccttct 26182
>gb|AC109805.8| Mus musculus chromosome 3, clone RP23-91D14, complete sequence Length = 171006 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctcc 40 |||||||||||||||||||| Sbjct: 109582 ccttctcctcccccacctcc 109601
>gb|AC004936.2| Homo sapiens PAC clone RP5-959C21 from 7, complete sequence Length = 139949 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 108877 ccttctcctccccctcctccttct 108900
>gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, complete sequence Length = 239452 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 cttcagcaaggcagcagtgc 527 |||||||||||||||||||| Sbjct: 38175 cttcagcaaggcagcagtgc 38156
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 208207 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 25241 ccttctcctccccctcctccttct 25218
>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete sequence Length = 202803 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 91210 ccttctcctccccctcctccttct 91187
>emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chromosome 6 Contains a reticulocalbin 1, EF-hand calcium binding domain (RCN1) pseudogene, a novel gene, a novel pseudogene, the gene for a novel zinc finger protein (C2H2 type) and 3 CpG islands, complete sequence Length = 163481 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 ||||||||||| |||||||||||| Sbjct: 17438 ccttctcctcctccacctccttct 17461
>emb|AL139258.13| Human DNA sequence from clone RP5-817C23 on chromosome 1p31.3-32.2 Contains a heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRPC) pseudogene, complete sequence Length = 100369 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 atctcatcccaccttctcct 29 |||||||||||||||||||| Sbjct: 59161 atctcatcccaccttctcct 59142
>emb|AL136999.26| Human DNA sequence from clone RP11-187E23 on chromosome 13q21.31-21.33 Contains STSs, GSSs and a CpG island, complete sequence Length = 171359 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 ctgacagccttgtgccactc 572 |||||||||||||||||||| Sbjct: 124752 ctgacagccttgtgccactc 124771
>gb|AC157921.5| Mus musculus chromosome 1, clone RP23-129L19, complete sequence Length = 220521 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 27316 ccttctcctccccctcctccttct 27293
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cagctaccagcggcaacaac 506 |||||||||||||||||||| Sbjct: 154086 cagctaccagcggcaacaac 154105
>emb|AL670010.1|NCB10H4 Neurospora crassa DNA linkage group V BAC contig B10H4 Length = 90763 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 catcccaccttctcctcccccacc 37 |||||||||| ||||||||||||| Sbjct: 41145 catcccacctcctcctcccccacc 41122
>emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P11 (ESSA project) Length = 96424 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 67109 ctcctcccccacctccttct 67090
>gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosome 9, complete sequence Length = 196764 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 ||||||||||| |||||||||||| Sbjct: 18710 ccttctcctcctccacctccttct 18733
>emb|CR848040.6| Zebrafish DNA sequence from clone DKEY-19P15 in linkage group 13, complete sequence Length = 146215 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 aaccttcagtatctgataacaagc 321 |||||||| ||||||||||||||| Sbjct: 123740 aaccttcaatatctgataacaagc 123763
>gb|AC022911.6| Homo sapiens chromosome 8, clone RP11-722A15, complete sequence Length = 176063 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 135101 ctcctcccccacctccttct 135120
>gb|AC040934.15| Homo sapiens chromosome 17, clone CTD-2026D20, complete sequence Length = 168194 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 tctatccatcttcttcctcc 65 |||||||||||||||||||| Sbjct: 39656 tctatccatcttcttcctcc 39637
>gb|AY966008.1| Anthonomus grandis farnesyl diphosphate synthase mRNA, complete cds Length = 1835 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 181 tggattccttcccagtaccgtgagttct 208 |||||||||||||||| | ||||||||| Sbjct: 519 tggattccttcccagttcggtgagttct 492
>gb|AE014183.1| Mus musculus piebald deletion region section 11 of 11 of the complete sequence Length = 249616 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 248283 ccttctcctccccctcctccttct 248306
>emb|BX539326.7| Zebrafish DNA sequence from clone DKEY-64H4 in linkage group 17, complete sequence Length = 143577 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ccaccttctcctcccccacctcct 41 |||||||||||||| ||||||||| Sbjct: 12653 ccaccttctcctcctccacctcct 12630
>gb|AC008946.7| Homo sapiens chromosome 19 clone CTD-2325M2, complete sequence Length = 109445 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 51550 ccttctcctccccctcctccttct 51573 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 51532 ccttctcctccccctcctccttct 51555
>gb|AC115620.3| Homo sapiens BAC clone RP11-305K4 from 4, complete sequence Length = 129984 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acctaatctcatcccaccttctcc 28 |||||||||||| ||||||||||| Sbjct: 115939 acctaatctcatgccaccttctcc 115916
>gb|AC105941.2| Homo sapiens chromosome 1 clone RP11-382E9, complete sequence Length = 177743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 atctgctgacagccttgtgc 567 |||||||||||||||||||| Sbjct: 61126 atctgctgacagccttgtgc 61145
>gb|AC087891.12| Mus musculus Strain C57BL6/J Chromosome 10 RP23-440N1, complete sequence Length = 195052 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 61806 ccttctcctccccctcctccttct 61783
>ref|XM_690023.1| PREDICTED: Danio rerio similar to myosin X (LOC566737), mRNA Length = 3609 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaccttctcctcccccacctcct 41 |||||||||||||| ||||||||| Sbjct: 3235 ccaccttctcctcctccacctcct 3258
>gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, complete sequence Length = 174566 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tctatccatcttcttcctcc 65 |||||||||||||||||||| Sbjct: 24889 tctatccatcttcttcctcc 24908
>ref|XM_687147.1| PREDICTED: Danio rerio similar to Protein FAM57B (LOC563785), mRNA Length = 4248 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 aaccttcagtatctgataacaagc 321 |||||||| ||||||||||||||| Sbjct: 869 aaccttcaatatctgataacaagc 892
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 ||||||||||| |||||||||||| Sbjct: 116571 ccttctcctcctccacctccttct 116594
>dbj|AK221722.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL17-39-L23 Length = 1322 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 728 ctcctcccccacctccttct 747
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 agcaacggctggaagcggct 375 |||||||||||||||||||| Sbjct: 1193058 agcaacggctggaagcggct 1193077
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaccttctcctcccccacctcct 41 ||||||||||||||||| |||||| Sbjct: 73728 ccaccttctcctccccctcctcct 73751
>dbj|AK034462.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330197C22 product:unclassifiable, full insert sequence Length = 2280 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 1716 ccttctcctccccctcctccttct 1739
>dbj|AK034252.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330169B04 product:unclassifiable, full insert sequence Length = 3504 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 2623 ccttctcctccccctcctccttct 2646
>emb|CR377918.1| Pinus pinaster SSR, clone PPB4A07 Length = 560 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaccttctcctcccccacctcct 41 |||||| ||||||||||||||||| Sbjct: 332 ccacctcctcctcccccacctcct 355
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggcgcgcgtgcgga 179 |||||||||||||||||||| Sbjct: 21445353 ggcggcggcgcgcgtgcgga 21445372
>emb|BX832372.1|CNS0A16U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZH06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1339 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 703 ctcctcccccacctccttct 722
>emb|BX833136.1|CNS0A0D0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 710 ctcctcccccacctccttct 729
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaccttctcctcccccacctcct 41 |||||||||||||| ||||||||| Sbjct: 43851 ccaccttctcctccaccacctcct 43874
>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence Length = 224431 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaccttctcctcccccacctcct 41 ||||||||||||||||| |||||| Sbjct: 34857 ccaccttctcctccccctcctcct 34880
>dbj|AB077045.1| Salvelinus leucomaenis WCL1 mRNA for rhamnose-binding lectin WCL1, complete cds Length = 1245 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 caaccagaactgtctgcaac 229 |||||||||||||||||||| Sbjct: 768 caaccagaactgtctgcaac 787
>gb|AC019105.7| Homo sapiens BAC clone RP11-475A8 from 2, complete sequence Length = 170491 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gataacaagctgatgaagaa 331 |||||||||||||||||||| Sbjct: 29412 gataacaagctgatgaagaa 29393
>emb|BX935610.1| Gallus gallus finished cDNA, clone ChEST166h1 Length = 1522 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||||| ||||||| Sbjct: 794 ccttctcctcccccacttccttct 817
>gb|AY085833.1| Arabidopsis thaliana clone 18843 mRNA, complete sequence Length = 1192 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcccccacctccttct 44 |||||||||||||||||||| Sbjct: 719 ctcctcccccacctccttct 738
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 428 ttgtggccatctgtactgctggccttgc 455 |||||||||||| | ||||||||||||| Sbjct: 39968 ttgtggccatctcttctgctggccttgc 39941
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 428 ttgtggccatctgtactgctggccttgc 455 |||||||||||| | ||||||||||||| Sbjct: 133730 ttgtggccatctcttctgctggccttgc 133703
>dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445H04 Length = 202821 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 aagctgatgaagaacatcag 337 |||||||||||||||||||| Sbjct: 184257 aagctgatgaagaacatcag 184238
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggcgcgcgtgcgga 179 |||||||||||||||||||| Sbjct: 6963 ggcggcggcgcgcgtgcgga 6982
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 aagctgatgaagaacatcag 337 |||||||||||||||||||| Sbjct: 61443 aagctgatgaagaacatcag 61424
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggcggcggcgcgcgtgcgga 179 |||||||||||||||||||| Sbjct: 62458 ggcggcggcgcgcgtgcgga 62477
>gb|AC157093.4| Mus musculus 6 BAC RP24-338D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185068 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaccttctcctcccccacctcct 41 |||||||||||||| ||||||||| Sbjct: 176031 ccaccttctcctccaccacctcct 176054
>dbj|AK099788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097A17, full insert sequence Length = 3409 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 428 ttgtggccatctgtactgctggccttgc 455 |||||||||||| | ||||||||||||| Sbjct: 1026 ttgtggccatctcttctgctggccttgc 1053
>dbj|AK073766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069D23, full insert sequence Length = 4027 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 428 ttgtggccatctgtactgctggccttgc 455 |||||||||||| | ||||||||||||| Sbjct: 1023 ttgtggccatctcttctgctggccttgc 1050
>dbj|AK069312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010E11, full insert sequence Length = 2224 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 428 ttgtggccatctgtactgctggccttgc 455 |||||||||||| | ||||||||||||| Sbjct: 1023 ttgtggccatctcttctgctggccttgc 1050
>emb|CT033781.12| Mouse DNA sequence from clone RP24-85H21 on chromosome 13, complete sequence Length = 206653 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 125930 ccttctcctccccctcctccttct 125907
>gb|AE003627.4| Drosophila melanogaster chromosome 2L, section 36 of 83 of the complete sequence Length = 264225 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ccaccttctcctcccccacctcct 41 ||||||||||||||||| |||||| Sbjct: 174640 ccaccttctcctccccctcctcct 174617
>dbj|AP000439.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-44E22, complete sequence Length = 105962 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cctccttctatctatccatc 55 |||||||||||||||||||| Sbjct: 32634 cctccttctatctatccatc 32615
>dbj|AP003965.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-31O9, complete sequence Length = 121852 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cctccttctatctatccatc 55 |||||||||||||||||||| Sbjct: 102502 cctccttctatctatccatc 102483
>gb|AC005784.1|AC005784 Homo sapiens chromosome 19, cosmid R30335, complete sequence Length = 43320 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ttcttcaaccagaactgtctgcaa 228 |||||| ||||||||||||||||| Sbjct: 4149 ttcttctaccagaactgtctgcaa 4126
>gb|AC005734.1|AC005734 Drosophila melanogaster DNA sequence (P1s DS00058 (D296), DS02068 (D297), and DS07249 (D318)), complete sequence Length = 155335 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ccaccttctcctcccccacctcct 41 ||||||||||||||||| |||||| Sbjct: 112933 ccaccttctcctccccctcctcct 112910
>emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chromosome 11, complete sequence Length = 180309 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 45739 ccttctcctccccctcctccttct 45716
>gb|AC131658.3| Mus musculus BAC clone RP23-239F24 from 3, complete sequence Length = 200955 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctcc 40 |||||||||||||||||||| Sbjct: 193733 ccttctcctcccccacctcc 193714
>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197906 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ccaccttctcctcccccacctcct 41 |||||||||||||| ||||||||| Sbjct: 187839 ccaccttctcctccaccacctcct 187816
>dbj|AP005233.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-211G23, complete sequence Length = 157200 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cctccttctatctatccatc 55 |||||||||||||||||||| Sbjct: 125493 cctccttctatctatccatc 125474
>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete sequence Length = 151891 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 110799 ccttctcctccccctcctccttct 110776
>gb|AC090939.2| Homo sapiens chromosome 3 clone RP11-127I14 map 3p, complete sequence Length = 161366 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccttctcctcccccacctccttct 44 |||||||||||||| ||||||||| Sbjct: 71334 ccttctcctccccctcctccttct 71357 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,090,722 Number of Sequences: 3902068 Number of extensions: 5090722 Number of successful extensions: 129341 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128455 Number of HSP's gapped (non-prelim): 879 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
