ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart10c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464424.1| Oryza sativa (japonica cultivar-group), mRNA 133 6e-28
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
3dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
4dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
5dbj|AK100401.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
6gb|BT018908.1| Zea mays clone EL01T0402E10.d mRNA sequence 88 3e-14
7gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 44 0.44
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.8
9gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, com... 42 1.8
10gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
11emb|CR385257.1| Gallus gallus finished cDNA, clone ChEST552c16 42 1.8
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
14gb|AY104093.1| Zea mays PCO060261 mRNA sequence 42 1.8
15gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, co... 40 6.9
16gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.9
17gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.9
18ref|XM_513757.1| PREDICTED: Pan troglodytes LOC457254 (LOC457254... 40 6.9
19ref|NG_005550.2| Homo sapiens neuroblastoma breakpoint family, m... 40 6.9
20gb|AY136942.1| Eragrostis tef cultivar Red Dabi isolate 3 granul... 40 6.9
21gb|AY136941.1| Eragrostis tef cultivar Karadebi isolate 5.7 gran... 40 6.9
22gb|AY136940.1| Eragrostis pilosa granule-bound starch synthase I... 40 6.9
23gb|AY136939.1| Eragrostis tef cultivar Addisie isolate 3.5 granu... 40 6.9
24gb|AY136938.1| Eragrostis tef cultivar Alba isolate 5.3 granule-... 40 6.9
25gb|AY136937.1| Eragrostis pilosa isolate 2.6 granule-bound starc... 40 6.9
26gb|AY136936.1| Eragrostis tef cultivar Karadebi isolate 5.6 gran... 40 6.9
27gb|AY136935.1| Eragrostis tef cultivar DZ-01-354 granule-bound s... 40 6.9
28gb|AY136934.1| Eragrostis pilosa isolate 2.7 granule-bound starc... 40 6.9
29gb|AY136933.1| Eragrostis tef isolate 1.2 granule-bound starch s... 40 6.9
30gb|AY136932.1| Eragrostis tef cultivar Addisie isolate 3.4 granu... 40 6.9
31gb|AY136931.1| Eragrostis tef cultivar Red Dabi isolate 6.9 gran... 40 6.9
32gb|AY136930.1| Eragrostis pilosa isolate 3.10 granule-bound star... 40 6.9
33gb|AY136929.1| Eragrostis pilosa granule-bound starch synthase I... 40 6.9
34gb|AY136928.1| Eragrostis pilosa granule-bound starch synthase I... 40 6.9
35gb|AY136926.1| Eragrostis pilosa isolate 4.7 granule-bound starc... 40 6.9
36gb|AY136925.1| Eragrostis tef cultivar Variegata isolate 6.4 gra... 40 6.9
37gb|AY136924.1| Eragrostis pilosa isolate 4.2 granule-bound starc... 40 6.9
38gb|AY136923.1| Eragrostis tef cultivar Variegata isolate 6.2 gra... 40 6.9
39gb|AY136921.1| Eragrostis tremula isolate 5.3 granule-bound star... 40 6.9
40gb|AY136919.1| Eragrostis heteromera isolate 4.1 granule-bound s... 40 6.9
41gb|AY136918.1| Eragrostis lugens granule-bound starch synthase I... 40 6.9
42gb|AY136917.1| Eragrostis minor isolate 22 granule-bound starch ... 40 6.9
43gb|AY136916.1| Eragrostis polytricha granule-bound starch syntha... 40 6.9
44gb|AY136915.1| Eragrostis mexicana isolate 3.1 granule-bound sta... 40 6.9
45gb|AY136914.1| Eragrostis macilenta isolate 6 granule-bound star... 40 6.9
46gb|AY136911.1| Eragrostis bicolor isolate 21 granule-bound starc... 40 6.9
47gb|AY136910.1| Eragrostis bicolor isolate 25 granule-bound starc... 40 6.9
48ref|XM_844243.1| PREDICTED: Canis familiaris similar to phosphod... 40 6.9
49ref|XM_853372.1| PREDICTED: Canis familiaris similar to phosphod... 40 6.9
50ref|XM_853333.1| PREDICTED: Canis familiaris similar to phosphod... 40 6.9
51ref|XM_853294.1| PREDICTED: Canis familiaris similar to phosphod... 40 6.9
52ref|XM_853260.1| PREDICTED: Canis familiaris similar to phosphod... 40 6.9
53ref|XM_533026.2| PREDICTED: Canis familiaris similar to phosphod... 40 6.9
54gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosom... 40 6.9
55emb|CR645554.2|CNS0EX2W Tetraodon nigroviridis full-length cDNA 40 6.9
56emb|CR352210.11| Zebrafish DNA sequence from clone DKEY-166N8 in... 40 6.9
57emb|AL732363.8| Human DNA sequence from clone RP11-744H18 on chr... 40 6.9
58gb|DQ372923.1| Bacteriophage mu1/6, complete genome 40 6.9
59dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.9
60gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, comp... 40 6.9
61ref|XM_691438.1| PREDICTED: Danio rerio similar to bicaudal D ho... 40 6.9
62gb|AC022428.7| Homo sapiens chromosome 5 clone CTD-2372H16, comp... 40 6.9
63gb|AC016591.6|AC016591 Homo sapiens chromosome 5 clone CTD-2003D... 40 6.9
64dbj|AK048649.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 6.9
65ref|XM_624231.1| PREDICTED: Apis mellifera similar to MGC81115 p... 40 6.9
66gb|AC016607.6|AC016607 Homo sapiens chromosome 5 clone CTD-2165C... 40 6.9
67ref|XM_221915.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 6.9
68dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.9
69emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 6.9
70gb|U57682.1|RCU57682 Rhodobacter capsulatus cosmids 143-147, com... 40 6.9 
>ref|XM_464424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2180

 Score =  133 bits (67), Expect = 6e-28
 Identities = 142/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 345 gccgccgcctgagatcctggagcagaagctggcggtgcagtgtggagagatacagaagct 404
           ||||||||| |||||||||||||||||||||  || |||| | || ||| | ||||||||
Sbjct: 288 gccgccgccggagatcctggagcagaagctgatggcgcagcggggggagctgcagaagct 347

                                                                       
Query: 405 ggcggtggagaacgaacggctcgccacgagccacgtgtctctgaggaaagagctggctgc 464
           ||||||||||||||| ||||| || | ||||||||  || ||| |||| ||||| || ||
Sbjct: 348 ggcggtggagaacgaccggctggcgatgagccacgactcgctgcggaaggagctcgccgc 407

                                                          
Query: 465 cgcgcagcaggagctgcagaggctgcaggcgcagggtgaggcggcga 511
            ||||||||||||  |||||||||||||||||||||  |||||||||
Sbjct: 408 ggcgcagcaggaggcgcagaggctgcaggcgcaggggcaggcggcga 454
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 6e-28
 Identities = 142/167 (85%)
 Strand = Plus / Minus

                                                                           
Query: 345     gccgccgcctgagatcctggagcagaagctggcggtgcagtgtggagagatacagaagct 404
               ||||||||| |||||||||||||||||||||  || |||| | || ||| | ||||||||
Sbjct: 5121223 gccgccgccggagatcctggagcagaagctgatggcgcagcggggggagctgcagaagct 5121164

                                                                           
Query: 405     ggcggtggagaacgaacggctcgccacgagccacgtgtctctgaggaaagagctggctgc 464
               ||||||||||||||| ||||| || | ||||||||  || ||| |||| ||||| || ||
Sbjct: 5121163 ggcggtggagaacgaccggctggcgatgagccacgactcgctgcggaaggagctcgccgc 5121104

                                                              
Query: 465     cgcgcagcaggagctgcagaggctgcaggcgcagggtgaggcggcga 511
                ||||||||||||  |||||||||||||||||||||  |||||||||
Sbjct: 5121103 ggcgcagcaggaggcgcagaggctgcaggcgcaggggcaggcggcga 5121057
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>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0453H10
          Length = 133464

 Score =  133 bits (67), Expect = 6e-28
 Identities = 142/167 (85%)
 Strand = Plus / Minus

                                                                         
Query: 345   gccgccgcctgagatcctggagcagaagctggcggtgcagtgtggagagatacagaagct 404
             ||||||||| |||||||||||||||||||||  || |||| | || ||| | ||||||||
Sbjct: 81721 gccgccgccggagatcctggagcagaagctgatggcgcagcggggggagctgcagaagct 81662

                                                                         
Query: 405   ggcggtggagaacgaacggctcgccacgagccacgtgtctctgaggaaagagctggctgc 464
             ||||||||||||||| ||||| || | ||||||||  || ||| |||| ||||| || ||
Sbjct: 81661 ggcggtggagaacgaccggctggcgatgagccacgactcgctgcggaaggagctcgccgc 81602

                                                            
Query: 465   cgcgcagcaggagctgcagaggctgcaggcgcagggtgaggcggcga 511
              ||||||||||||  |||||||||||||||||||||  |||||||||
Sbjct: 81601 ggcgcagcaggaggcgcagaggctgcaggcgcaggggcaggcggcga 81555
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>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0437H03
          Length = 170173

 Score =  133 bits (67), Expect = 6e-28
 Identities = 142/167 (85%)
 Strand = Plus / Minus

                                                                         
Query: 345   gccgccgcctgagatcctggagcagaagctggcggtgcagtgtggagagatacagaagct 404
             ||||||||| |||||||||||||||||||||  || |||| | || ||| | ||||||||
Sbjct: 14676 gccgccgccggagatcctggagcagaagctgatggcgcagcggggggagctgcagaagct 14617

                                                                         
Query: 405   ggcggtggagaacgaacggctcgccacgagccacgtgtctctgaggaaagagctggctgc 464
             ||||||||||||||| ||||| || | ||||||||  || ||| |||| ||||| || ||
Sbjct: 14616 ggcggtggagaacgaccggctggcgatgagccacgactcgctgcggaaggagctcgccgc 14557

                                                            
Query: 465   cgcgcagcaggagctgcagaggctgcaggcgcagggtgaggcggcga 511
              ||||||||||||  |||||||||||||||||||||  |||||||||
Sbjct: 14556 ggcgcagcaggaggcgcagaggctgcaggcgcaggggcaggcggcga 14510
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>dbj|AK100401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086N19, full
           insert sequence
          Length = 2181

 Score =  125 bits (63), Expect = 2e-25
 Identities = 141/167 (84%)
 Strand = Plus / Plus

                                                                       
Query: 345 gccgccgcctgagatcctggagcagaagctggcggtgcagtgtggagagatacagaagct 404
           ||||||||| |||||||||||||||||||||  || |||| | || ||| | ||||||||
Sbjct: 288 gccgccgccggagatcctggagcagaagctgatggcgcagcggggggagctgcagaagct 347

                                                                       
Query: 405 ggcggtggagaacgaacggctcgccacgagccacgtgtctctgaggaaagagctggctgc 464
           |||||||||| |||| ||||| || | ||||||||  || ||| |||| ||||| || ||
Sbjct: 348 ggcggtggaggacgaccggctggcgatgagccacgactcgctgcggaaggagctcgccgc 407

                                                          
Query: 465 cgcgcagcaggagctgcagaggctgcaggcgcagggtgaggcggcga 511
            ||||||||||||  |||||||||||||||||||||  |||||||||
Sbjct: 408 ggcgcagcaggaggcgcagaggctgcaggcgcaggggcaggcggcga 454
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>gb|BT018908.1| Zea mays clone EL01T0402E10.d mRNA sequence
          Length = 1455

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                       
Query: 445 ctgaggaaagagctggctgccgcgcagcaggagctgcagaggctgcaggcgcagggtgag 504
           ||||||| |||||| || || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 17  ctgaggacagagctagccgcggcgcagcaggagctgcagaggctgcaggcgcagggagag 76

                   
Query: 505 gcggcgaa 512
           || |||||
Sbjct: 77  gccgcgaa 84
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>gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-434H17, complete
             sequence
          Length = 161421

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 468   gcagcaggagctgcagaggctg 489
             ||||||||||||||||||||||
Sbjct: 36840 gcagcaggagctgcagaggctg 36819
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 463     gccgcgcagcaggagctgcag 483
               |||||||||||||||||||||
Sbjct: 3488068 gccgcgcagcaggagctgcag 3488088
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>gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, complete sequence
          Length = 133544

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 473   aggagctgcagaggctgcagg 493
             |||||||||||||||||||||
Sbjct: 40747 aggagctgcagaggctgcagg 40767
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>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
             complete sequence
          Length = 103330

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 463   gccgcgcagcaggagctgcag 483
             |||||||||||||||||||||
Sbjct: 22307 gccgcgcagcaggagctgcag 22287
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>emb|CR385257.1| Gallus gallus finished cDNA, clone ChEST552c16
          Length = 823

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 468 gcagcaggagctgcagaggctgcag 492
           ||||||||||||| |||||||||||
Sbjct: 10  gcagcaggagctggagaggctgcag 34
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 463     gccgcgcagcaggagctgcag 483
               |||||||||||||||||||||
Sbjct: 3488179 gccgcgcagcaggagctgcag 3488199
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>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0026H19, complete sequence
          Length = 150620

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 463  gccgcgcagcaggagctgcag 483
            |||||||||||||||||||||
Sbjct: 5721 gccgcgcagcaggagctgcag 5741
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>gb|AY104093.1| Zea mays PCO060261 mRNA sequence
          Length = 1763

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 78  gctcctccgccgccgaccaccgcga 102
           ||||||||||||||| |||||||||
Sbjct: 107 gctcctccgccgccggccaccgcga 83
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>gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, complete sequence
          Length = 188130

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   gtggagagatacagaagctg 405
             ||||||||||||||||||||
Sbjct: 16865 gtggagagatacagaagctg 16846
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 485     ggctgcaggcgcagggtgag 504
               ||||||||||||||||||||
Sbjct: 1746260 ggctgcaggcgcagggtgag 1746279
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    cacccaccgccagggccggg 323
              ||||||||||||||||||||
Sbjct: 213728 cacccaccgccagggccggg 213747
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>ref|XM_513757.1| PREDICTED: Pan troglodytes LOC457254 (LOC457254), mRNA
          Length = 1093

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 469 cagcaggagctgcagaggctgcag 492
           |||||||||||||||| |||||||
Sbjct: 770 cagcaggagctgcagatgctgcag 793
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>ref|NG_005550.2| Homo sapiens neuroblastoma breakpoint family, member 17 (pseudogene)
             (NBPF17P) on chromosome 1
          Length = 64687

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 469   cagcaggagctgcagaggctgcag 492
             |||||||||||||||| |||||||
Sbjct: 48066 cagcaggagctgcagatgctgcag 48043
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>gb|AY136942.1| Eragrostis tef cultivar Red Dabi isolate 3 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1275

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136941.1| Eragrostis tef cultivar Karadebi isolate 5.7 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136940.1| Eragrostis pilosa granule-bound starch synthase I (waxy) gene,
           partial sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136939.1| Eragrostis tef cultivar Addisie isolate 3.5 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136938.1| Eragrostis tef cultivar Alba isolate 5.3 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136937.1| Eragrostis pilosa isolate 2.6 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136936.1| Eragrostis tef cultivar Karadebi isolate 5.6 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1247

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136935.1| Eragrostis tef cultivar DZ-01-354 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1245

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136934.1| Eragrostis pilosa isolate 2.7 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1245

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136933.1| Eragrostis tef isolate 1.2 granule-bound starch synthase I (waxy)
           gene, partial sequence
          Length = 1246

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136932.1| Eragrostis tef cultivar Addisie isolate 3.4 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1245

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136931.1| Eragrostis tef cultivar Red Dabi isolate 6.9 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1247

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136930.1| Eragrostis pilosa isolate 3.10 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1251

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136929.1| Eragrostis pilosa granule-bound starch synthase I (waxy) gene,
           partial sequence
          Length = 1277

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 330 cctgagatcctggagcagaa 349
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>gb|AY136928.1| Eragrostis pilosa granule-bound starch synthase I (waxy) gene,
           partial sequence
          Length = 1246

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 300 cctgagatcctggagcagaa 319
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>gb|AY136926.1| Eragrostis pilosa isolate 4.7 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1276

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136925.1| Eragrostis tef cultivar Variegata isolate 6.4 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1277

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136924.1| Eragrostis pilosa isolate 4.2 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1242

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136923.1| Eragrostis tef cultivar Variegata isolate 6.2 granule-bound starch
           synthase I (waxy) gene, partial sequence
          Length = 1246

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 301 cctgagatcctggagcagaa 320
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>gb|AY136921.1| Eragrostis tremula isolate 5.3 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1242

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 294 cctgagatcctggagcagaa 313
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>gb|AY136919.1| Eragrostis heteromera isolate 4.1 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1219

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 328 cctgagatcctggagcagaa 347
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>gb|AY136918.1| Eragrostis lugens granule-bound starch synthase I (waxy) gene,
           partial sequence
          Length = 1280

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 330 cctgagatcctggagcagaa 349
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>gb|AY136917.1| Eragrostis minor isolate 22 granule-bound starch synthase I (waxy)
           gene, partial sequence
          Length = 1275

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 326 cctgagatcctggagcagaa 345
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>gb|AY136916.1| Eragrostis polytricha granule-bound starch synthase I (waxy) gene,
           partial sequence
          Length = 1281

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 330 cctgagatcctggagcagaa 349
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>gb|AY136915.1| Eragrostis mexicana isolate 3.1 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1280

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 331 cctgagatcctggagcagaa 350
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>gb|AY136914.1| Eragrostis macilenta isolate 6 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1242

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 297 cctgagatcctggagcagaa 316
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>gb|AY136911.1| Eragrostis bicolor isolate 21 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1288

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 329 cctgagatcctggagcagaa 348
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>gb|AY136910.1| Eragrostis bicolor isolate 25 granule-bound starch synthase I
           (waxy) gene, partial sequence
          Length = 1288

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cctgagatcctggagcagaa 371
           ||||||||||||||||||||
Sbjct: 329 cctgagatcctggagcagaa 348
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>ref|XM_844243.1| PREDICTED: Canis familiaris similar to phosphodiesterase 4D
            interacting protein isoform 2, transcript variant 2
            (LOC475817), mRNA
          Length = 8170

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 469  cagcaggagctgcagaggctgcag 492
            |||||||||||||||| |||||||
Sbjct: 5425 cagcaggagctgcagatgctgcag 5448
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>ref|XM_853372.1| PREDICTED: Canis familiaris similar to phosphodiesterase 4D
            interacting protein isoform 2, transcript variant 7
            (LOC475817), mRNA
          Length = 8194

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 469  cagcaggagctgcagaggctgcag 492
            |||||||||||||||| |||||||
Sbjct: 5425 cagcaggagctgcagatgctgcag 5448
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>ref|XM_853333.1| PREDICTED: Canis familiaris similar to phosphodiesterase 4D
            interacting protein isoform 2, transcript variant 6
            (LOC475817), mRNA
          Length = 7637

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 469  cagcaggagctgcagaggctgcag 492
            |||||||||||||||| |||||||
Sbjct: 4868 cagcaggagctgcagatgctgcag 4891
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>ref|XM_853294.1| PREDICTED: Canis familiaris similar to phosphodiesterase 4D
            interacting protein isoform 2, transcript variant 5
            (LOC475817), mRNA
          Length = 8145

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 469  cagcaggagctgcagaggctgcag 492
            |||||||||||||||| |||||||
Sbjct: 5376 cagcaggagctgcagatgctgcag 5399
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>ref|XM_853260.1| PREDICTED: Canis familiaris similar to phosphodiesterase 4D
            interacting protein isoform 2, transcript variant 4
            (LOC475817), mRNA
          Length = 8072

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 469  cagcaggagctgcagaggctgcag 492
            |||||||||||||||| |||||||
Sbjct: 5303 cagcaggagctgcagatgctgcag 5326
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>ref|XM_533026.2| PREDICTED: Canis familiaris similar to phosphodiesterase 4D
            interacting protein isoform 2, transcript variant 1
            (LOC475817), mRNA
          Length = 8158

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 469  cagcaggagctgcagaggctgcag 492
            |||||||||||||||| |||||||
Sbjct: 5425 cagcaggagctgcagatgctgcag 5448
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>gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosome 5, complete sequence
          Length = 211763

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   gtggagagatacagaagctg 405
             ||||||||||||||||||||
Sbjct: 47538 gtggagagatacagaagctg 47557
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>emb|CR645554.2|CNS0EX2W Tetraodon nigroviridis full-length cDNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 470 agcaggagctgcagaggctg 489
           ||||||||||||||||||||
Sbjct: 883 agcaggagctgcagaggctg 864
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>emb|CR352210.11| Zebrafish DNA sequence from clone DKEY-166N8 in linkage group 23,
              complete sequence
          Length = 180924

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcttaccaccaccggccgct 239
              ||||||||||||||||||||
Sbjct: 115794 tcttaccaccaccggccgct 115813
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>emb|AL732363.8| Human DNA sequence from clone RP11-744H18 on chromosome 1 Contains a
             phosphodiesterase 4D interacting protein (myomegalin)
             (PDE4DIP) pseudogene and the 3' end of a novel pseudogene,
             complete sequence
          Length = 106538

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 469   cagcaggagctgcagaggctgcag 492
             |||||||||||||||| |||||||
Sbjct: 37693 cagcaggagctgcagatgctgcag 37716
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>gb|DQ372923.1| Bacteriophage mu1/6, complete genome
          Length = 38194

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 485   ggctgcaggcgcagggtgaggcggcgaa 512
             |||||||||||||||  |||||||||||
Sbjct: 30210 ggctgcaggcgcaggtcgaggcggcgaa 30237
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 219     ttcttaccaccaccggccgc 238
               ||||||||||||||||||||
Sbjct: 3780852 ttcttaccaccaccggccgc 3780871
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>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     aacaaggaggtgaaggacaa 56
              ||||||||||||||||||||
Sbjct: 136855 aacaaggaggtgaaggacaa 136874
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>ref|XM_691438.1| PREDICTED: Danio rerio similar to bicaudal D homolog 2 isoform 2
           (LOC568125), partial mRNA
          Length = 393

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 gagaacgaacggctcgccac 431
           ||||||||||||||||||||
Sbjct: 352 gagaacgaacggctcgccac 371
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>gb|AC022428.7| Homo sapiens chromosome 5 clone CTD-2372H16, complete sequence
          Length = 94891

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   gcagcaggagctgcagaggc 487
             ||||||||||||||||||||
Sbjct: 40508 gcagcaggagctgcagaggc 40489
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>gb|AC016591.6|AC016591 Homo sapiens chromosome 5 clone CTD-2003D5, complete sequence
          Length = 137366

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   gcagcaggagctgcagaggc 487
             ||||||||||||||||||||
Sbjct: 11696 gcagcaggagctgcagaggc 11715
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>dbj|AK048649.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130093H02 product:similar to CDNA
            FLJ14564 FIS, CLONE NT2RM4000229, WEAKLY SIMILAR TO
            GALLUS GALLUS ACTIN FILAMENT-ASSOCIATED PROTEIN
            (AFAP-110) MRNA (FRAGMENT) [Homo sapiens], full insert
            sequence
          Length = 3669

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   ggaggtgaaggacaaccaga 61
            ||||||||||||||||||||
Sbjct: 2398 ggaggtgaaggacaaccaga 2417
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>ref|XM_624231.1| PREDICTED: Apis mellifera similar to MGC81115 protein (LOC551846),
           mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 cgcggtcgttgtgtcgttga 186
           ||||||||||||||||||||
Sbjct: 204 cgcggtcgttgtgtcgttga 185
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>gb|AC016607.6|AC016607 Homo sapiens chromosome 5 clone CTD-2165C24, complete sequence
          Length = 112390

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    gcagcaggagctgcagaggc 487
              ||||||||||||||||||||
Sbjct: 106819 gcagcaggagctgcagaggc 106838
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>ref|XM_221915.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
           DKFZp434J1015.1 - human (fragment) (LOC288485), mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 470 agcaggagctgcagaggctgcagg 493
           ||||||||||| ||||||||||||
Sbjct: 479 agcaggagctggagaggctgcagg 502
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 487     ctgcaggcgcagggtgaggc 506
               ||||||||||||||||||||
Sbjct: 1741827 ctgcaggcgcagggtgaggc 1741808
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      cctcctctcgacgctcctcc 85
               ||||||||||||||||||||
Sbjct: 1544521 cctcctctcgacgctcctcc 1544502
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>gb|U57682.1|RCU57682 Rhodobacter capsulatus cosmids 143-147, complete sequence
          Length = 86896

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   tgcaggcgcagggtgaggcg 507
             ||||||||||||||||||||
Sbjct: 11608 tgcaggcgcagggtgaggcg 11627


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,729,554
Number of Sequences: 3902068
Number of extensions: 3729554
Number of successful extensions: 87063
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86592
Number of HSP's gapped (non-prelim): 466
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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