Clone Name | bart10c06 |
---|---|
Clone Library Name | barley_pub |
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Frame = +3 Query: 351 PALGLNQDGLYLLDAKRALT--ASALADWNPR-DATPCGWTGVSC 476 P+L LNQD L AK L+ A +L+ W+ D TPC W GVSC Sbjct: 17 PSLSLNQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSC 61
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 40.0 bits (92), Expect = 0.003 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +3 Query: 354 ALGLNQDGLYLLDAKR---ALTASALADWNPRDATPCGWTGVSC 476 A LN DG LL R ++ + WN D+TPC W GV C Sbjct: 21 AFALNSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVEC 64
>FABH1_BACCR (Q81GM0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 (EC| 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 1) (Beta-ketoacyl-ACP synthase III 1) (KAS III 1) Length = 310 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -1 Query: 231 EVRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 130 E++ G+ +DGD+ + +G G GG +W + LRW Sbjct: 278 ELQNGRIQDGDLIILVGFG---GGLTWGAVALRW 308
>FABH1_BACAN (Q81JG0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 (EC| 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 1) (Beta-ketoacyl-ACP synthase III 1) (KAS III 1) Length = 310 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -1 Query: 231 EVRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 130 E++ G+ +DGD+ + +G G GG +W + LRW Sbjct: 278 ELQNGRIQDGDLIILVGFG---GGLTWGAVALRW 308
>MTSM_SERMA (P14230) Modification methylase SmaI (EC 2.1.1.113) (N-4| cytosine-specific methyltransferase SmaI) (M.SmaI) Length = 292 Score = 29.6 bits (65), Expect = 4.5 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 231 EVRRGQKKDGDMGVGIGDGECAGGTSW 151 +VRR K DG + + IGD +GG +W Sbjct: 84 DVRRTLKDDGTLWLNIGDSYTSGGRTW 110
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 29.6 bits (65), Expect = 4.5 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = +3 Query: 363 LNQDGLYLLDAKRALTA---SALADWNPRDATPCGWTGVSCVDG 485 L D L LL K + + L++W+PR + PC ++GV+C+ G Sbjct: 36 LKTDSLSLLSFKTMIQDDPNNILSNWSPRKS-PCQFSGVTCLGG 78
>FABH_OCEIH (Q8ERU6) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 312 Score = 29.3 bits (64), Expect = 5.9 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 Query: 228 VRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 130 V+ G+ KD D+ V +G G GG +W + LRW Sbjct: 281 VKEGKIKDNDLIVLVGFG---GGLTWGAVALRW 310
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 29.3 bits (64), Expect = 5.9 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +3 Query: 360 GLNQDGLYLLDAKRAL--TASALADWNPRDATPCGWTGVSC 476 GL +D LL K AL T + L +W PC +TGVSC Sbjct: 39 GLYKDSQQLLSFKAALPPTPTLLQNWLS-STDPCSFTGVSC 78
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 29.3 bits (64), Expect = 5.9 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +3 Query: 363 LNQDGLYLLDAKRAL-TASALADWN-PRDATPCGWTGVSCVDG 485 L+ + L+ KR+L S L+ WN A+ C W GV+C+ G Sbjct: 23 LSSETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTCLLG 65
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC| 2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 28.9 bits (63), Expect = 7.7 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +3 Query: 360 GLNQDGLYLLDAKRAL--TASALADWNPRDATPCGWTGVSC 476 GL +D LL K AL T + L +W PC +TGVSC Sbjct: 39 GLYKDSQQLLSFKAALPPTPTLLQNWLSSTG-PCSFTGVSC 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,630,498 Number of Sequences: 219361 Number of extensions: 550260 Number of successful extensions: 1797 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1765 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1795 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)