ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart10c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 43 5e-04
2RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 40 0.003
3FABH1_BACCR (Q81GM0) 3-oxoacyl-[acyl-carrier-protein] synthase 3... 30 3.5
4FABH1_BACAN (Q81JG0) 3-oxoacyl-[acyl-carrier-protein] synthase 3... 30 3.5
5MTSM_SERMA (P14230) Modification methylase SmaI (EC 2.1.1.113) (... 30 4.5
6BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 30 4.5
7FABH_OCEIH (Q8ERU6) 3-oxoacyl-[acyl-carrier-protein] synthase 3 ... 29 5.9
8BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11... 29 5.9
9EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 29 5.9
10BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precurso... 29 7.7

>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 351 PALGLNQDGLYLLDAKRALT--ASALADWNPR-DATPCGWTGVSC 476
           P+L LNQD   L  AK  L+  A +L+ W+   D TPC W GVSC
Sbjct: 17  PSLSLNQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSC 61



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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +3

Query: 354 ALGLNQDGLYLLDAKR---ALTASALADWNPRDATPCGWTGVSC 476
           A  LN DG  LL   R   ++ +     WN  D+TPC W GV C
Sbjct: 21  AFALNSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVEC 64



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>FABH1_BACCR (Q81GM0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 (EC|
           2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III
           protein 1) (Beta-ketoacyl-ACP synthase III 1) (KAS III
           1)
          Length = 310

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -1

Query: 231 EVRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 130
           E++ G+ +DGD+ + +G G   GG +W  + LRW
Sbjct: 278 ELQNGRIQDGDLIILVGFG---GGLTWGAVALRW 308



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>FABH1_BACAN (Q81JG0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 (EC|
           2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III
           protein 1) (Beta-ketoacyl-ACP synthase III 1) (KAS III
           1)
          Length = 310

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -1

Query: 231 EVRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 130
           E++ G+ +DGD+ + +G G   GG +W  + LRW
Sbjct: 278 ELQNGRIQDGDLIILVGFG---GGLTWGAVALRW 308



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>MTSM_SERMA (P14230) Modification methylase SmaI (EC 2.1.1.113) (N-4|
           cytosine-specific methyltransferase SmaI) (M.SmaI)
          Length = 292

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 231 EVRRGQKKDGDMGVGIGDGECAGGTSW 151
           +VRR  K DG + + IGD   +GG +W
Sbjct: 84  DVRRTLKDDGTLWLNIGDSYTSGGRTW 110



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 363 LNQDGLYLLDAKRALTA---SALADWNPRDATPCGWTGVSCVDG 485
           L  D L LL  K  +     + L++W+PR + PC ++GV+C+ G
Sbjct: 36  LKTDSLSLLSFKTMIQDDPNNILSNWSPRKS-PCQFSGVTCLGG 78



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>FABH_OCEIH (Q8ERU6) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 312

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 228 VRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 130
           V+ G+ KD D+ V +G G   GG +W  + LRW
Sbjct: 281 VKEGKIKDNDLIVLVGFG---GGLTWGAVALRW 310



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>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)|
           (Brassinosteroid LRR receptor kinase)
          Length = 1207

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 360 GLNQDGLYLLDAKRAL--TASALADWNPRDATPCGWTGVSC 476
           GL +D   LL  K AL  T + L +W      PC +TGVSC
Sbjct: 39  GLYKDSQQLLSFKAALPPTPTLLQNWLS-STDPCSFTGVSC 78



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 363 LNQDGLYLLDAKRAL-TASALADWN-PRDATPCGWTGVSCVDG 485
           L+ +   L+  KR+L   S L+ WN    A+ C W GV+C+ G
Sbjct: 23  LSSETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTCLLG 65



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>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC|
           2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1)
           (Systemin receptor SR160)
          Length = 1207

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 360 GLNQDGLYLLDAKRAL--TASALADWNPRDATPCGWTGVSC 476
           GL +D   LL  K AL  T + L +W      PC +TGVSC
Sbjct: 39  GLYKDSQQLLSFKAALPPTPTLLQNWLSSTG-PCSFTGVSC 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,630,498
Number of Sequences: 219361
Number of extensions: 550260
Number of successful extensions: 1797
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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