Clone Name | bart10c04 |
---|---|
Clone Library Name | barley_pub |
>gb|AF203879.1|AF203879 Oryza sativa peroxiredoxin mRNA, complete cds Length = 626 Score = 430 bits (217), Expect = e-117 Identities = 412/477 (86%) Strand = Plus / Plus Query: 53 catggctccgattggcgtgggcagcaccctccccgacgggcagctcgggtggttcgacga 112 |||||| ||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 39 catggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacgg 98 Query: 113 gaacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaaggtcatcct 172 | | ||| |||||||||||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 99 ggaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcct 158 Query: 173 cttcggcgtccccggcgccttcacccccacctgcagcaatcagcatgtaccaggcttcat 232 ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 159 cttcggcgtccccggtgccttcaccccgacctgcagcaatcagcatgtgccaggattcat 218 Query: 233 tactcaagctgaggatctcaaagccaagggtgtagaggagattcttcttgtcagcgttaa 292 | ||| |||||| | |||||||||||||||||||| || || | |||||||| ||||| Sbjct: 219 aaatcaggctgagcagctcaaagccaagggtgtagacgacatcttgcttgtcagtgttaa 278 Query: 293 tgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 |||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||| || Sbjct: 279 cgacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtgaaatt 338 Query: 353 ccttgctgatggagcggcagcatacacaaaagcacttggtcttgagcttgatctcacgga 412 |||||| ||||| || | ||||||| || |||||||||||||||||||| || |||| Sbjct: 339 ccttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctttcgga 398 Query: 413 gaagggattgggtcttcgttcgaagcgctttgctctccttgctgacgacctcaaggtcac 472 ||| || | ||| ||||||||| || |||||||||||||||||| |||||||||| || Sbjct: 399 gaaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaaggttac 458 Query: 473 cgtcgcaaacatcgaggaaggaggccagttcacaatctctggtgctgaagagatcct 529 || |||||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 459 tgttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatcct 515
>dbj|AK058509.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G06, full insert sequence Length = 770 Score = 430 bits (217), Expect = e-117 Identities = 412/477 (86%) Strand = Plus / Plus Query: 53 catggctccgattggcgtgggcagcaccctccccgacgggcagctcgggtggttcgacga 112 |||||| ||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 97 catggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacgg 156 Query: 113 gaacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaaggtcatcct 172 | | ||| |||||||||||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 157 ggaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcct 216 Query: 173 cttcggcgtccccggcgccttcacccccacctgcagcaatcagcatgtaccaggcttcat 232 ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 217 cttcggcgtccccggtgccttcaccccgacctgcagcaatcagcatgtgccaggattcat 276 Query: 233 tactcaagctgaggatctcaaagccaagggtgtagaggagattcttcttgtcagcgttaa 292 | ||| |||||| | |||||||||||||||||||| || || | |||||||| ||||| Sbjct: 277 aaatcaggctgagcagctcaaagccaagggtgtagacgacatcttgcttgtcagtgttaa 336 Query: 293 tgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 |||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||| || Sbjct: 337 cgacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtgaaatt 396 Query: 353 ccttgctgatggagcggcagcatacacaaaagcacttggtcttgagcttgatctcacgga 412 |||||| ||||| || | ||||||| || |||||||||||||||||||| || |||| Sbjct: 397 ccttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctttcgga 456 Query: 413 gaagggattgggtcttcgttcgaagcgctttgctctccttgctgacgacctcaaggtcac 472 ||| || | ||| ||||||||| || |||||||||||||||||| |||||||||| || Sbjct: 457 gaaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaaggttac 516 Query: 473 cgtcgcaaacatcgaggaaggaggccagttcacaatctctggtgctgaagagatcct 529 || |||||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 517 tgttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatcct 573
>ref|NM_191997.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 489 Score = 428 bits (216), Expect = e-117 Identities = 411/476 (86%) Strand = Plus / Plus Query: 54 atggctccgattggcgtgggcagcaccctccccgacgggcagctcgggtggttcgacgag 113 ||||| ||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||| | Sbjct: 1 atggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacggg 60 Query: 114 aacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaaggtcatcctc 173 | ||| |||||||||||||||| ||||| ||| |||||||||||||||||| ||||| Sbjct: 61 gaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcctc 120 Query: 174 ttcggcgtccccggcgccttcacccccacctgcagcaatcagcatgtaccaggcttcatt 233 |||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 121 ttcggcgtccccggtgccttcaccccgacctgcagcaatcagcatgtgccaggattcata 180 Query: 234 actcaagctgaggatctcaaagccaagggtgtagaggagattcttcttgtcagcgttaat 293 | ||| |||||| | |||||||||||||||||||| || || | |||||||| ||||| Sbjct: 181 aatcaggctgagcagctcaaagccaagggtgtagacgacatcttgcttgtcagtgttaac 240 Query: 294 gacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagttc 353 |||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||| ||| Sbjct: 241 gacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtgaaattc 300 Query: 354 cttgctgatggagcggcagcatacacaaaagcacttggtcttgagcttgatctcacggag 413 ||||| ||||| || | ||||||| || |||||||||||||||||||| || ||||| Sbjct: 301 cttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctttcggag 360 Query: 414 aagggattgggtcttcgttcgaagcgctttgctctccttgctgacgacctcaaggtcacc 473 || || | ||| ||||||||| || |||||||||||||||||| |||||||||| || Sbjct: 361 aaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaaggttact 420 Query: 474 gtcgcaaacatcgaggaaggaggccagttcacaatctctggtgctgaagagatcct 529 || |||||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 421 gttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatcct 476
>gb|AY107305.1| Zea mays PCO096955 mRNA sequence Length = 820 Score = 418 bits (211), Expect = e-114 Identities = 391/451 (86%) Strand = Plus / Plus Query: 79 ccctccccgacgggcagctcgggtggttcgacgagaacgaccagctgcagcaggtctcga 138 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105 ccctccccgacggccagctcgggtggttcgacgagaacgaccagctgcagcaggtctccg 164 Query: 139 tccactccctggccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcaccc 198 ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 tccacgcgctcgccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcaccc 224 Query: 199 ccacctgcagcaatcagcatgtaccaggcttcattactcaagctgaggatctcaaagcca 258 | ||||||||||| |||||||| ||||||||||| || || |||||| | |||||||||| Sbjct: 225 cgacctgcagcaaccagcatgtgccaggcttcatcacacaggctgagcagctcaaagcca 284 Query: 259 agggtgtagaggagattcttcttgtcagcgttaatgacccctttgtcatgaaggcatggg 318 |||||||||| ||||| || ||| |||||||||| |||||||| ||||||||||| |||| Sbjct: 285 agggtgtagacgagatcctgcttatcagcgttaacgaccccttcgtcatgaaggcgtggg 344 Query: 319 caaagacatacccagagaacaagcatgtgaagttccttgctgatggagcggcagcataca 378 | ||||| ||||| ||||||||||| ||||||||||| || || ||| | | ||| |||| Sbjct: 345 cgaagacctaccccgagaacaagcacgtgaagttcctcgccgacggatctggagcgtaca 404 Query: 379 caaaagcacttggtcttgagcttgatctcacggagaagggattgggtcttcgttcgaagc 438 | || || || | || ||||| ||||||||||| || || |||| | || |||||| Sbjct: 405 ccaaggcgctcgacctcgagctcgatctcacggacaaagggctgggcgtgcgctcgaaga 464 Query: 439 gctttgctctccttgctgacgacctcaaggtcaccgtcgcaaacatcgaggaaggaggcc 498 | || |||||||| || |||||||||| ||||||||||||||||||||||||||| || | Sbjct: 465 ggttcgctctcctggccgacgacctcacggtcaccgtcgcaaacatcgaggaaggcgggc 524 Query: 499 agttcacaatctctggtgctgaagagatcct 529 ||||||| ||||| || ||||| |||||||| Sbjct: 525 agttcacgatctccggcgctgaggagatcct 555
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 218 bits (110), Expect = 1e-53 Identities = 209/242 (86%) Strand = Plus / Minus Query: 288 gttaatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtg 347 ||||| |||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| Sbjct: 27739526 gttaacgacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtg 27739467 Query: 348 aagttccttgctgatggagcggcagcatacacaaaagcacttggtcttgagcttgatctc 407 || |||||||| ||||| || | ||||||| || |||||||||||||||||||| || Sbjct: 27739466 aaattccttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctt 27739407 Query: 408 acggagaagggattgggtcttcgttcgaagcgctttgctctccttgctgacgacctcaag 467 ||||||| || | ||| ||||||||| || |||||||||||||||||| |||||||| Sbjct: 27739406 tcggagaaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaag 27739347 Query: 468 gtcaccgtcgcaaacatcgaggaaggaggccagttcacaatctctggtgctgaagagatc 527 || || || |||||||| |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 27739346 gttactgttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatc 27739287 Query: 528 ct 529 || Sbjct: 27739286 ct 27739285 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 53 catggctccgattggcgtgggcagcaccctccccgacgggcagctcgggtggttcgacga 112 |||||| ||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 27741049 catggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacgg 27740990 Query: 113 gaacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaaggtcatcct 172 | | ||| |||||||||||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 27740989 ggaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcct 27740930 Query: 173 cttcggcgtccccggcgccttcacccccacctgcag 208 ||||||||||||||| ||||||||||| |||||||| Sbjct: 27740929 cttcggcgtccccggtgccttcaccccgacctgcag 27740894 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 207 agcaatcagcatgtaccaggcttcattactcaagctgaggatctcaaagccaagggtgta 266 |||||||||||||| ||||| ||||| | ||| |||||| | |||||||||||||||||| Sbjct: 27739891 agcaatcagcatgtgccaggattcataaatcaggctgagcagctcaaagccaagggtgta 27739832 Query: 267 ga 268 || Sbjct: 27739831 ga 27739830
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 218 bits (110), Expect = 1e-53 Identities = 209/242 (86%) Strand = Plus / Minus Query: 288 gttaatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtg 347 ||||| |||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| Sbjct: 31581 gttaacgacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtg 31522 Query: 348 aagttccttgctgatggagcggcagcatacacaaaagcacttggtcttgagcttgatctc 407 || |||||||| ||||| || | ||||||| || |||||||||||||||||||| || Sbjct: 31521 aaattccttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctt 31462 Query: 408 acggagaagggattgggtcttcgttcgaagcgctttgctctccttgctgacgacctcaag 467 ||||||| || | ||| ||||||||| || |||||||||||||||||| |||||||| Sbjct: 31461 tcggagaaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaag 31402 Query: 468 gtcaccgtcgcaaacatcgaggaaggaggccagttcacaatctctggtgctgaagagatc 527 || || || |||||||| |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 31401 gttactgttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatc 31342 Query: 528 ct 529 || Sbjct: 31341 ct 31340 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 53 catggctccgattggcgtgggcagcaccctccccgacgggcagctcgggtggttcgacga 112 |||||| ||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 33104 catggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacgg 33045 Query: 113 gaacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaaggtcatcct 172 | | ||| |||||||||||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 33044 ggaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcct 32985 Query: 173 cttcggcgtccccggcgccttcacccccacctgcag 208 ||||||||||||||| ||||||||||| |||||||| Sbjct: 32984 cttcggcgtccccggtgccttcaccccgacctgcag 32949 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 207 agcaatcagcatgtaccaggcttcattactcaagctgaggatctcaaagccaagggtgta 266 |||||||||||||| ||||| ||||| | ||| |||||| | |||||||||||||||||| Sbjct: 31946 agcaatcagcatgtgccaggattcataaatcaggctgagcagctcaaagccaagggtgta 31887 Query: 267 ga 268 || Sbjct: 31886 ga 31885
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 218 bits (110), Expect = 1e-53 Identities = 209/242 (86%) Strand = Plus / Minus Query: 288 gttaatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtg 347 ||||| |||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||| Sbjct: 148092 gttaacgacccctttgtcatgaaggcgtgggcaaagtcataccctgagaataagcatgtg 148033 Query: 348 aagttccttgctgatggagcggcagcatacacaaaagcacttggtcttgagcttgatctc 407 || |||||||| ||||| || | ||||||| || |||||||||||||||||||| || Sbjct: 148032 aaattccttgccgatggtttgggaacatacaccaaggcacttggtcttgagcttgacctt 147973 Query: 408 acggagaagggattgggtcttcgttcgaagcgctttgctctccttgctgacgacctcaag 467 ||||||| || | ||| ||||||||| || |||||||||||||||||| |||||||| Sbjct: 147972 tcggagaaagggcttggtattcgttcgagacggtttgctctccttgctgacaacctcaag 147913 Query: 468 gtcaccgtcgcaaacatcgaggaaggaggccagttcacaatctctggtgctgaagagatc 527 || || || |||||||| |||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 147912 gttactgttgcaaacattgaggaaggtggccaattcacaatctctggtgctgaggagatc 147853 Query: 528 ct 529 || Sbjct: 147852 ct 147851 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 53 catggctccgattggcgtgggcagcaccctccccgacgggcagctcgggtggttcgacga 112 |||||| ||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 149615 catggccccggttgccgtgggcgacaccctccccgacggccagctggggtggttcgacgg 149556 Query: 113 gaacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaaggtcatcct 172 | | ||| |||||||||||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 149555 ggaggacaagctgcagcaggtctccgtccacggcctcgccgccggcaagaaggtcgtcct 149496 Query: 173 cttcggcgtccccggcgccttcacccccacctgcag 208 ||||||||||||||| ||||||||||| |||||||| Sbjct: 149495 cttcggcgtccccggtgccttcaccccgacctgcag 149460 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 207 agcaatcagcatgtaccaggcttcattactcaagctgaggatctcaaagccaagggtgta 266 |||||||||||||| ||||| ||||| | ||| |||||| | |||||||||||||||||| Sbjct: 148457 agcaatcagcatgtgccaggattcataaatcaggctgagcagctcaaagccaagggtgta 148398 Query: 267 ga 268 || Sbjct: 148397 ga 148396
>gb|AF133302.1|AF133302 Brassica rapa subsp. pekinensis type 2 peroxiredoxin (PrxII) mRNA, complete cds Length = 718 Score = 99.6 bits (50), Expect = 9e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 105 ttcgacgagaacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaag 164 |||||||||||||| ||||| ||| ||||| | |||||||| |||||||| |||||| Sbjct: 74 ttcgacgagaacgatcagctccagactgtctccgttcactccctcgccgccggtaagaag 133 Query: 165 gtcatcctcttcggcgtccccggcgccttcacccccacctgcagca 210 |||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 134 gtcatcctcttcggtgtccctggtgctttcacccccacctgcagca 179 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 260 aatgatccgtttgtaatgaaggcatgggggaagacgtacccagagaacaagcatgtgaag 319 Query: 351 tt 352 || Sbjct: 320 tt 321
>gb|DQ296178.1| Brassica rapa clone 115 unknown mRNA Length = 714 Score = 99.6 bits (50), Expect = 9e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 105 ttcgacgagaacgaccagctgcagcaggtctcgatccactccctggccgccggcaagaag 164 |||||||||||||| ||||| ||| ||||| | |||||||| |||||||| |||||| Sbjct: 132 ttcgacgagaacgatcagctccagactgtctccgttcactccctcgccgccggtaagaag 191 Query: 165 gtcatcctcttcggcgtccccggcgccttcacccccacctgcagca 210 |||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 192 gtcatcctcttcggtgtccctggtgctttcacccccacctgcagca 237 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 318 aatgatccgtttgtgatgaaggcatgggggaagacgtacccagagaacaagcatgtgaag 377 Query: 351 tt 352 || Sbjct: 378 tt 379
>gb|AY496960.1| Capsicum annuum thioredoxin peroxidase CATP mRNA, complete cds Length = 509 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 285 agcgttaatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcat 344 ||||| ||||| || |||||||||||||||||||| || || | ||| |||||||| ||| Sbjct: 110 agcgtcaatgatccttttgtcatgaaggcatgggcgaaaaccttccctgagaacaaacat 169 Query: 345 gtgaagttccttgctgatggagc 367 ||||||||||||||||||||||| Sbjct: 170 gtgaagttccttgctgatggagc 192
>gb|AF442385.2| Capsicum annuum thioredoxin peroxidase mRNA, complete cds Length = 723 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 285 agcgttaatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcat 344 ||||| ||||| || |||||||||||||||||||| || || | ||| |||||||| ||| Sbjct: 283 agcgtcaatgatccttttgtcatgaaggcatgggcgaaaaccttccctgagaacaaacat 342 Query: 345 gtgaagttccttgctgatggagc 367 ||||||||||||||||||||||| Sbjct: 343 gtgaagttccttgctgatggagc 365
>ref|NM_104757.3| Arabidopsis thaliana antioxidant AT1G60740 mRNA, complete cds Length = 677 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 291 aatgatccatttgtgatgaaggcatggggaaagacataccaagagaacaagcatgtgaag 350 Query: 351 tt 352 || Sbjct: 351 tt 352
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 85556 aatgatccatttgtgatgaaggcatggggaaagacataccaagagaacaagcatgtgaag 85615 Query: 351 tt 352 || Sbjct: 85616 tt 85617
>emb|BX814755.1|CNS0AC3A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 275 aatgatccatttgtgatgaaggcatggggaaagacataccaagagaacaagcatgtgaag 334 Query: 351 tt 352 || Sbjct: 335 tt 336
>emb|BX816839.1|CNS0ABRO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 643 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 257 aatgatccatttgtgatgaaggcatggggaaagacataccaagagaacaagcatgtgaag 316 Query: 351 tt 352 || Sbjct: 317 tt 318
>dbj|AK176203.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL23-08-A21 Length = 688 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 292 aatgatccatttgtgatgaaggcatggggaaagacataccaagagaacaagcatgtgaag 351 Query: 351 tt 352 || Sbjct: 352 tt 353
>gb|AY281152.1| Lycopersicon esculentum thioredoxin peroxidase 1 (TPx1) mRNA, complete cds Length = 807 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 |||||||||||||| |||||||| |||||||| || ||||| |||||||| ||||| || Sbjct: 284 aatgacccctttgtgatgaaggcctgggcaaaaacttaccctgagaacaaacatgtaaaa 343 Query: 351 ttccttgctgatggagc 367 || |||||||||||||| Sbjct: 344 tttcttgctgatggagc 360 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgcagca 210 ||||||||||||||| |||||| ||| ||||| || ||||| ||||| ||||||| Sbjct: 149 ggcaagaaggtcatcatcttcgccgttcccggagctttcactcccacttgcagca 203
>gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete sequence Length = 116833 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 313 catgggcaaagacatacccagagaacaagcatgtgaagttccttgctgatgg 364 ||||||| ||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 98063 catgggccaagacattcccagagaacaagcatgtcaagttccttgctgatgg 98012
>gb|AY088309.1| Arabidopsis thaliana clone 5476 mRNA, complete sequence Length = 727 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 306 atgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 306 atgaaagcatggggaaagacatacccagagaacaagcatgtgaagtt 352 Score = 44.1 bits (22), Expect = 0.46 Identities = 58/70 (82%) Strand = Plus / Plus Query: 141 cactccctggccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcaccccc 200 ||||| || |||||||| || || ||||||||||| || || || || || ||||| ||| Sbjct: 141 cactctctcgccgccggtaaaaaagtcatcctctttggtgttcctggtgctttcactccc 200 Query: 201 acctgcagca 210 |||||||||| Sbjct: 201 acctgcagca 210
>ref|NM_105269.2| Arabidopsis thaliana TPX2; antioxidant AT1G65970 (TPX2) mRNA, complete cds Length = 1260 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 298 aatgatccatttgtgatgaaggcatggggaaaaacatatccagagaacaagcatgtgaag 357 Query: 351 tt 352 || Sbjct: 358 tt 359
>emb|AJ843119.1| Plantago major mRNA for thioredoxin-dependent peroxidase (tpx1 gene) Length = 743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||||||| |||||||| || |||||||| || ||| Sbjct: 297 aatgatccatttgtgatgaaggcatgggcaaaaacataccccgacaacaagcacgtcaag 356 Query: 351 ttccttgctgatgg 364 ||||| |||||||| Sbjct: 357 ttcctagctgatgg 370 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 135 tcgatccactccctggccgccggcaagaaggtcatcctcttcggcgtccccggcgccttc 194 ||||| |||||||| |||||||| ||||||||||||||||||| || ||||| |||||| Sbjct: 141 tcgattcactcccttgccgccggtaagaaggtcatcctcttcgctgttcccggtgccttc 200 Query: 195 acccccacctgcagca 210 || || || ||||||| Sbjct: 201 actcctacttgcagca 216
>gb|AF332463.1| Arabidopsis thaliana clone C00171 (f) putative type 2 peroxiredoxin protein (At1g65970) mRNA, complete cds Length = 489 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 238 aatgatccatttgtgatgaaggcatggggaaaaacatatccagagaacaagcatgtgaag 297 Query: 351 tt 352 || Sbjct: 298 tt 299
>gb|AY084458.1| Arabidopsis thaliana clone 10862 mRNA, complete sequence Length = 683 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 298 aatgatccatttgtgatgaaggcatggggaaaaacatatccagagaacaagcatgtgaag 357 Query: 351 tt 352 || Sbjct: 358 tt 359
>gb|BT003050.1| Arabidopsis thaliana At1g65970 gene, complete cds Length = 489 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 238 aatgatccatttgtgatgaaggcatggggaaaaacatatccagagaacaagcatgtgaag 297 Query: 351 tt 352 || Sbjct: 298 tt 299
>gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 81490 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 63139 aatgatccatttgtgatgaaggcatggggaaaaacatatccagagaacaagcatgtgaag 63080 Query: 351 tt 352 || Sbjct: 63079 tt 63078 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 65127 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 65075
>gb|AF121356.1|AF121356 Arabidopsis thaliana peroxiredoxin TPx2 mRNA, complete cds Length = 647 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 297 aatgatccatttgtgatgaaggcatggggaaaaacatatccagagaacaagcatgtgaag 356 Query: 351 tt 352 || Sbjct: 357 tt 358
>gb|AY085779.1| Arabidopsis thaliana clone 1810 mRNA, complete sequence Length = 678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaag 350 ||||| || ||||| ||||||||||||| || |||||| |||||||||||||||||||| Sbjct: 292 aatgatccatttgtgatgaaggcatgggggaaaacatacacagagaacaagcatgtgaag 351 Query: 351 ttccttgctgatggagcggcagcatacacaaaagcacttggtcttgagcttgatctcacg 410 || | || |||||| | | || ||||||| | ||||| |||||||||||||||| | Sbjct: 352 tttgtagcagatggatctggagaatacacacatcttcttggacttgagcttgatctcaag 411 Query: 411 gagaaggg 418 || ||||| Sbjct: 412 gacaaggg 419
>ref|NM_001036162.1| Arabidopsis thaliana TPX1; antioxidant AT1G65980 (TPX1) transcript variant AT1G65980.2 mRNA, complete cds Length = 838 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 430 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 482
>ref|NM_105270.2| Arabidopsis thaliana TPX1; antioxidant AT1G65980 (TPX1) transcript variant AT1G65980.1 mRNA, complete cds Length = 890 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 430 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 482
>ref|XM_959107.1| Neurospora crassa OR74A hypothetical protein (NCU03151.1) partial mRNA Length = 417 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 158 caagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgc 206 |||||||||| ||||| ||| ||||||||| |||||||||||||||||| Sbjct: 48 caagaaggtcgtcctcgtcgccgtccccggtgccttcacccccacctgc 96
>ref|XM_330586.1| Neurospora crassa OR74A hypothetical protein (NCU03151.1) partial mRNA Length = 417 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 158 caagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgc 206 |||||||||| ||||| ||| ||||||||| |||||||||||||||||| Sbjct: 48 caagaaggtcgtcctcgtcgccgtccccggtgccttcacccccacctgc 96
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 158 caagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgc 206 |||||||||| ||||| ||| ||||||||| |||||||||||||||||| Sbjct: 2800 caagaaggtcgtcctcgtcgccgtccccggtgccttcacccccacctgc 2848
>gb|AF483268.1| Populus tremula x Populus tremuloides peroxiredoxin mRNA, complete cds Length = 489 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 153 gccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgcagc 209 ||||| || |||||||||||||| || || ||||| ||||||||||||||||||||| Sbjct: 100 gccggtaaaaaggtcatcctctttggtgttcccggggccttcacccccacctgcagc 156 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 283 tcagcgttaatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagc 342 ||||||| || ||||||||||| |||||||||||||| || | ||||| ||||| |||| Sbjct: 230 tcagcgtcaacgacccctttgtgatgaaggcatgggccaaatcttaccctgagaataagc 289 Query: 343 atgtgaagttccttgctgatgg 364 |||| || ||| | |||||||| Sbjct: 290 atgtcaaattcttagctgatgg 311
>gb|AY065056.1| Arabidopsis thaliana At1g65980/F12P19_14 mRNA, complete cds Length = 666 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 310 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 362
>gb|AF332464.1| Arabidopsis thaliana clone C00172 (e) putative type 2 peroxiredoxin protein (At1g65980) mRNA, complete cds Length = 489 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 247 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 299
>emb|BX813402.1|CNS0ADKB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 717 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 348 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 400
>emb|BX816021.1|CNS0AD4O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 605 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 252 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 304
>emb|BX841968.1|CNS09Y6H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 720 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 289 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 341
>gb|AF121355.1|AF121355 Arabidopsis thaliana peroxiredoxin TPx1 mRNA, complete cds Length = 688 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 300 tttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgtgaagtt 352 ||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 300 tttgtgatgaaagcatggggaaaaacatacccagagaacaaacatgtgaagtt 352
>gb|AE009045.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 71 of 256 of the complete sequence Length = 10844 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 155 cggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgc 206 |||||||||||| ||||||| | ||| |||||||||||||||||||||||| Sbjct: 3715 cggcaagaaggtggtcctctttgccgttcccggcgccttcacccccacctgc 3664
>ref|XM_676869.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8692.2), mRNA Length = 507 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 153 gccggcaagaaggtcatcctcttcggcgtccccggcgccttcaccccc 200 |||| |||||||||||||||||||| | ||||||| |||||||||||| Sbjct: 130 gccgacaagaaggtcatcctcttcgccctccccggtgccttcaccccc 177
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 155 cggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgc 206 |||||||||||| ||||||| | ||| |||||||||||||||||||||||| Sbjct: 775850 cggcaagaaggtggtcctctttgccgttcccggcgccttcacccccacctgc 775799
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 65094 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 65054
>ref|XM_504381.1| Yarrowia lipolytica CLIB122, YALI0E25091g predicted mRNA Length = 591 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 179 cgtccccggcgccttcacccccacctgca 207 ||||||||||||||||||||||||||||| Sbjct: 222 cgtccccggcgccttcacccccacctgca 250
>ref|NM_142423.2| Drosophila melanogaster CG7215-RA, transcript variant A (CG7215), mRNA Length = 1422 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 911 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 951
>ref|NM_142422.3| Drosophila melanogaster CG7217-RA, transcript variant A (CG7217), mRNA Length = 1422 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 911 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 951
>ref|NM_001032020.1| Drosophila melanogaster CG7217-RB, transcript variant B (CG7217), mRNA Length = 757 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 246 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 286
>gb|AY051983.1| Drosophila melanogaster LD45324 full length cDNA Length = 712 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 191 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 231
>gb|BT022231.1| Drosophila melanogaster IP12465 full insert cDNA Length = 1821 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 1577 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 1537
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 151 ccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgca 207 ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 24830797 ccgccgggaagaaggtggtcctcttcgcggtccccggcgcgttcaccccgacctgca 24830853
>gb|BT003526.1| Drosophila melanogaster RE19605 full insert cDNA Length = 1438 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 912 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 952
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 151 ccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgca 207 ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 41880 ccgccgggaagaaggtggtcctcttcgcggtccccggcgcgttcaccccgacctgca 41936
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 151 ccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgca 207 ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 164478 ccgccgggaagaaggtggtcctcttcgcggtccccggcgcgttcaccccgacctgca 164534
>dbj|AK104130.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H07, full insert sequence Length = 1098 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 151 ccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgca 207 ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 302 ccgccgggaagaaggtggtcctcttcgcggtccccggcgcgttcaccccgacctgca 358
>dbj|AK068955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C09, full insert sequence Length = 1140 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 151 ccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgca 207 ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 398 ccgccgggaagaaggtggtcctcttcgcggtccccggcgcgttcaccccgacctgca 454
>dbj|AK058459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H12, full insert sequence Length = 1248 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 151 ccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgca 207 ||||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 397 ccgccgggaagaaggtggtcctcttcgcggtccccggcgcgttcaccccgacctgca 453
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 5518 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 5478
>gb|BT001575.1| Drosophila melanogaster RE23139 full insert cDNA Length = 1438 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcac 196 ||||||||||| ||| |||||||||| |||||||||||||| Sbjct: 912 ggcaagaaggtgatcatcttcggcgttcccggcgccttcac 952
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 179 cgtccccggcgccttcacccccacctgca 207 ||||||||||||||||||||||||||||| Sbjct: 3006398 cgtccccggcgccttcacccccacctgca 3006426
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 172 tcttcggcgtccccggcgccttcacccccacctg 205 |||||||||| ||||||||||||||||| ||||| Sbjct: 43881 tcttcggcgtgcccggcgccttcacccctacctg 43914
>gb|BT009091.1| Triticum aestivum clone wkm2c.pk0003.c3:fis, full insert mRNA sequence Length = 1123 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 151 ccgccggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgca 207 |||| ||||||||||| |||| |||| ||||| ||||||||||| |||||||||| Sbjct: 334 ccgcgggcaagaaggtggtcctgttcgcggtcccgggcgccttcacgcccacctgca 390
>emb|AL132698.1|PPAL00008 Scherffelia dubia EST clone 48; putative peroxiredoxin Length = 658 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgcag 208 |||||||||||| ||||||| | |||||| || || ||||| ||||||||||| Sbjct: 371 ggcaagaaggtcgtcctctttgccgtcccaggagcgttcacacccacctgcag 423
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgcagcaa 211 ||||||||||| | || ||||| || |||||||||||||| || ||||||||||| Sbjct: 6196635 ggcaagaaggtggttctgttcggtgttcccggcgccttcacgccgacctgcagcaa 6196580
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 156 ggcaagaaggtcatcctcttcggcgtccccggcgccttcacccccacctgc 206 |||||||||||| ||| ||| |||||||||||| |||||||| |||||| Sbjct: 2139203 ggcaagaaggtcgccctgttctccgtccccggcgcgttcaccccgacctgc 2139253
>gb|AY584753.1| Chaetomium globosum probable peroxisomal membrane protein gene, complete cds Length = 731 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 169 tcctcttcggcgtccccggcgccttcacccccac 202 ||||| ||| |||||||||||||||||| ||||| Sbjct: 246 tcctcgtcgccgtccccggcgccttcacgcccac 279
>gb|AY555771.1| Chaetomium globosum probable peroxisomal membrane protein mRNA, complete cds Length = 747 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 169 tcctcttcggcgtccccggcgccttcacccccac 202 ||||| ||| |||||||||||||||||| ||||| Sbjct: 221 tcctcgtcgccgtccccggcgccttcacgcccac 254
>gb|AE005738.1| Caulobacter crescentus CB15 section 64 of 359 of the complete genome Length = 10037 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ccctggccgccggcaagaaggt 166 |||||||||||||||||||||| Sbjct: 5600 ccctggccgccggcaagaaggt 5621
>emb|CR956393.14| Pig DNA sequence from clone CH242-163M14 on chromosome 17, complete sequence Length = 195684 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 caaccctcccaaacccagagca 40 |||||||||||||||||||||| Sbjct: 126564 caaccctcccaaacccagagca 126585
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ggcgccttcacccccacctgc 206 ||||||||||||||||||||| Sbjct: 1429857 ggcgccttcacccccacctgc 1429837
>gb|AE006000.1| Caulobacter crescentus CB15 section 326 of 359 of the complete genome Length = 12299 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 174 ttcggcgtccccggcgccttcacccccacctgc 206 |||| ||| ||||||||||||||||| |||||| Sbjct: 2352 ttcgccgtgcccggcgccttcaccccgacctgc 2320
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ggcgccttcacccccacctgc 206 ||||||||||||||||||||| Sbjct: 1015479 ggcgccttcacccccacctgc 1015499
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 agcaggtctcgatccactccc 147 ||||||||||||||||||||| Sbjct: 5263477 agcaggtctcgatccactccc 5263497
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 gcgccttcacccccacctgcagca 210 |||||||| ||||||||||||||| Sbjct: 125993 gcgccttctcccccacctgcagca 125970
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 tccttgctgacgacctcaaggtca 471 |||||||||| ||||||||||||| Sbjct: 642898 tccttgctgatgacctcaaggtca 642921
>gb|AE009245.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 15 of 187 of the complete sequence Length = 12796 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gccgccggcaagaaggtcat 169 |||||||||||||||||||| Sbjct: 6003 gccgccggcaagaaggtcat 5984
>gb|AE008368.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 172 of 187 of the complete sequence Length = 13928 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gccgccggcaagaaggtcat 169 |||||||||||||||||||| Sbjct: 7926 gccgccggcaagaaggtcat 7945
>gb|AC157659.2| Mus musculus BAC clone RP23-275J9 from chromosome 6, complete sequence Length = 210200 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 ccccacctgcagcaatcagc 216 |||||||||||||||||||| Sbjct: 121357 ccccacctgcagcaatcagc 121338
>gb|AC154710.2| Mus musculus BAC clone RP24-357L12 from chromosome 14, complete sequence Length = 163421 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tccctttcaaccctcccaaa 31 |||||||||||||||||||| Sbjct: 92553 tccctttcaaccctcccaaa 92572
>ref|XM_823671.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.4750) partial mRNA Length = 2751 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gcgctttgctctccttgctg 456 |||||||||||||||||||| Sbjct: 1574 gcgctttgctctccttgctg 1555
>ref|XM_743565.1| Aspergillus fumigatus Af293 maltose O-acetyltransferase (Afu3g03380) partial mRNA Length = 648 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 ccgtcgcaaacatcgaggaa 491 |||||||||||||||||||| Sbjct: 444 ccgtcgcaaacatcgaggaa 463
>ref|XM_746035.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g12500) partial mRNA Length = 663 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatggg 318 |||||||||||||| |||||||| |||| Sbjct: 409 aatgacccctttgtgatgaaggcctggg 436
>ref|XM_380529.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00353.1) partial mRNA Length = 567 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gacccctttgtcatgaaggc 313 |||||||||||||||||||| Sbjct: 316 gacccctttgtcatgaaggc 335
>ref|XM_570263.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND02400) partial mRNA Length = 9246 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 tccttgctgacgacctcaaggtca 471 |||||||||| ||||||||||||| Sbjct: 5801 tccttgctgatgacctcaaggtca 5824
>emb|BX548003.29| Zebrafish DNA sequence from clone DKEY-97I5 in linkage group 9, complete sequence Length = 145468 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/35 (91%), Gaps = 2/35 (5%) Strand = Plus / Plus Query: 280 ttgtcagcgttaatgac--ccctttgtcatgaagg 312 ||||||||||||||||| || ||||||||||||| Sbjct: 118366 ttgtcagcgttaatgacatccttttgtcatgaagg 118400
>emb|AL589665.4| Human DNA sequence from clone RP11-123D12 on chromosome 1 Contains a neural precursor cell expressed developmentally down-regulated 5 (NEDD5) pseudogene, complete sequence Length = 132623 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttgttttctatccctttcaa 21 |||||||||||||||||||| Sbjct: 89534 ttgttttctatccctttcaa 89553
>emb|AL136084.11| Human DNA sequence from clone RP11-92C4 on chromosome 9q22.33-31.3 Contains the GALNT12 gene for UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12), the 5' end of the COL15A1 gene for collagen type XV, alpha 1, a novel gene, a non-metastatic cells 2, protein (NM23B) expressed in (NME2) pseudogene and a CpG island, complete sequence Length = 149930 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 gccagttcacaatctctggt 515 |||||||||||||||||||| Sbjct: 139322 gccagttcacaatctctggt 139341
>emb|Y08703.2|RMSLYE Rhizobium meliloti partial galactoglucan operon, strain EFB1 Length = 8196 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 tccctggccgccggcaagaaggtc 167 |||||| ||||||||||||||||| Sbjct: 5396 tccctgaccgccggcaagaaggtc 5373
>emb|AL606512.8| Mouse DNA sequence from clone RP23-155D19 on chromosome 11, complete sequence Length = 157494 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 catgaaggcatgggcaaaga 324 |||||||||||||||||||| Sbjct: 82020 catgaaggcatgggcaaaga 82039
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete sequence Length = 219065 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ccagttcacaatctctggtg 516 |||||||||||||||||||| Sbjct: 169046 ccagttcacaatctctggtg 169065
>gb|AC087516.12| Homo sapiens chromosome 15, clone RP11-475A13, complete sequence Length = 187299 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gcttcattactcaagctgag 245 |||||||||||||||||||| Sbjct: 153810 gcttcattactcaagctgag 153791
>gb|AC026970.7| Homo sapiens chromosome 11, clone RP11-472K20, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 caagcatgtgaagttccttg 357 |||||||||||||||||||| Sbjct: 46636 caagcatgtgaagttccttg 46655
>gb|AF320600.1|AF320600S1 Mus musculus NKR-P1F (Nkrp1f) gene, exons 2-6, and C lectin-related protein A gene, complete cds Length = 64931 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 ccccacctgcagcaatcagc 216 |||||||||||||||||||| Sbjct: 4623 ccccacctgcagcaatcagc 4604
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 174 ttcggcgtccccggcgccttcacccccacctg 205 |||| ||| ||||| ||||||||||||||||| Sbjct: 3520695 ttcgccgtgcccggggccttcacccccacctg 3520664
>gb|AC160562.2| Mus musculus BAC clone RP23-9A12 from chromosome 9, complete sequence Length = 241034 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 gctttgctctccttgctgac 458 |||||||||||||||||||| Sbjct: 57680 gctttgctctccttgctgac 57661
>gb|AY974142.1| Pinus resinosa p-166-2_1 (p-166-2) mRNA, partial cds Length = 620 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 291 aatgacccctttgtcatgaaggcatgggcaaagacatacccagagaacaagcatgt 346 |||||||| || || ||||||| |||||| |||||||| || | ||||||||||| Sbjct: 66 aatgacccattcgtgatgaaggaatgggcgaagacatatacaaacaacaagcatgt 121
>gb|AC105755.4| Homo sapiens BAC clone RP11-46H14 from 4, complete sequence Length = 145673 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctttcaaccctcccaaaccc 34 |||||||||||||||||||| Sbjct: 94661 ctttcaaccctcccaaaccc 94680
>gb|AC068069.12|AC068069 Homo sapiens chromosome 15 clone RP11-11B2, complete sequence Length = 175036 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gcttcattactcaagctgag 245 |||||||||||||||||||| Sbjct: 149735 gcttcattactcaagctgag 149754
>gb|AF261108.1|AF261108 Homo sapiens type XV collagen (COL15A1) gene, promoter sequence and exon 1, partial sequence Length = 5497 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 gccagttcacaatctctggt 515 |||||||||||||||||||| Sbjct: 3214 gccagttcacaatctctggt 3233
>gb|AE004929.1| Pseudomonas aeruginosa PAO1, section 490 of 529 of the complete genome Length = 10638 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccggcgccttcacccccacc 203 |||||||||||||||||||| Sbjct: 9622 ccggcgccttcacccccacc 9641
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggtcatcctcttcggcgtcc 183 |||||||||||||||||||| Sbjct: 1522403 ggtcatcctcttcggcgtcc 1522384
>gb|AC174446.2| Mus musculus BAC clone RP23-356N23 from chromosome 6, complete sequence Length = 193034 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ccccacctgcagcaatcagc 216 |||||||||||||||||||| Sbjct: 190833 ccccacctgcagcaatcagc 190852
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aacccagagcaagcaagagc 49 |||||||||||||||||||| Sbjct: 295056 aacccagagcaagcaagagc 295075
>emb|BX324161.3| Mouse DNA sequence from clone RP23-385D8 on chromosome 4, complete sequence Length = 45041 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccctttcaaccctcccaaac 32 |||||||||||||||||||| Sbjct: 3747 ccctttcaaccctcccaaac 3766
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggtcatcctcttcggcgtcc 183 |||||||||||||||||||| Sbjct: 1198404 ggtcatcctcttcggcgtcc 1198385
>emb|AL137863.15| Human DNA sequence from clone RP4-592P18 on chromosome 11p12-14.1. Contains GSSs, complete sequence Length = 34537 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 caagcatgtgaagttccttg 357 |||||||||||||||||||| Sbjct: 12635 caagcatgtgaagttccttg 12616 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,428,860 Number of Sequences: 3902068 Number of extensions: 4428860 Number of successful extensions: 109695 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 109057 Number of HSP's gapped (non-prelim): 631 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)