Clone Name | bart10b05 |
---|---|
Clone Library Name | barley_pub |
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 38 agatgcagatctttgtgaagaccctcaccg 67
>gb|S82312.1|S82312S1 Zea mays polyubiquitin homolog mRNA, partial cds Length = 199 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 83 agatgcagatctttgtgaagaccctcaccg 112
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 28018930 agatgcagatctttgtgaagaccctcaccg 28018959 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Minus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||| ||||| Sbjct: 27575676 agatgcagatctttgtgaagacactcac 27575649 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 27575446 atgcagatctttgtgaagacc 27575426 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 28020299 gatgcagatcttcgtgaagaccct 28020322
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 1700 agatgcagatctttgtgaagaccctcaccg 1729 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 2841 gatgcagatcttcgtgaagaccct 2864
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 63749 agatgcagatctttgtgaagaccctcaccg 63778 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 65118 gatgcagatcttcgtgaagaccct 65141
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 70 agatgcagatctttgtgaagaccctcaccg 99
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 123 agatgcagatctttgtgaagaccctcaccg 152 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 1037 atgcagatctttgtgaagacc 1057 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||| ||||| Sbjct: 581 atgcagatctttgtgaaaaccct 603
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 52 agatgcagatctttgtgaagaccctcaccg 81 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 1193 gatgcagatcttcgtgaagaccct 1216 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 965 gatgcagatcttcgtgaagaccct 988
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 1223 agatgcagatctttgtgaagaccctcaccg 1252 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 2137 atgcagatctttgtgaagacc 2157 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||| ||||| Sbjct: 1681 atgcagatctttgtgaaaaccct 1703
>gb|L41658.1|SCFPOLY Saccharum hybrid (clone SCUBI561) polyubiquitin mRNA, complete cds Length = 1187 Score = 60.0 bits (30), Expect = 1e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||||| Sbjct: 69 agatgcagatctttgtgaagaccctcaccg 98 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 299 atgcagatctttgtgaagaccct 321 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 755 atgcagatctttgtgaagacc 775 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 527 atgcagatcttcgtgaagaccct 549
>ref|XM_522865.1| PREDICTED: Pan troglodytes similar to ubiquitin A-52 residue ribosomal protein fusion product 1 (LOC467468), mRNA Length = 444 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 58 gagatgcagatctttgtgaagaccctcac 86
>ref|XM_528575.1| PREDICTED: Pan troglodytes similar to ubiquitin A-52 residue ribosomal protein fusion product 1 (LOC473205), mRNA Length = 1311 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 52 gagatgcagatctttgtgaagaccctcac 80
>gb|AC005165.1| Homo sapiens BAC clone CTA-242H14 from 7, complete sequence Length = 155164 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Minus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 26805 gagatgcagatctttgtgaagaccctcac 26777
>gb|AC146016.2| Pan troglodytes BAC clone RP43-131D21 from 7, complete sequence Length = 169393 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Minus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 79463 gagatgcagatctttgtgaagaccctcac 79435
>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the 5' end of the CDKN2B gene for cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52) (RPL40) pseudogene, the 3' end of a variant of the MTAP gene for methylthioadenosine phosphorylase (MSAP), a novel gene and a CpG island, complete sequence Length = 157533 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 3738 gagatgcagatctttgtgaagaccctcac 3766
>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence Length = 151712 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Minus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 70220 gagatgcagatctttgtgaagaccctcac 70192
>gb|AC000049.11| Homo sapiens Chromosome 9p21 Cosmid Clone c86, complete sequence Length = 44160 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Minus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 21957 gagatgcagatctttgtgaagaccctcac 21929
>ref|NG_001207.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 1 (UBA52P1) on chromosome 7 Length = 675 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 109 gagatgcagatctttgtgaagaccctcac 137
>ref|NG_002524.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3 (UBA52P3) on chromosome 14 Length = 721 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 141 gagatgcagatctttgtgaagaccctcac 169
>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence Length = 200622 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 164443 gagatgcagatctttgtgaagaccctcac 164471
>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence Length = 170376 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 102585 gagatgcagatctttgtgaagaccctcac 102613
>emb|AL121579.4|CNS01DRX Human chromosome 14 DNA sequence BAC R-349A22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161771 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 93167 gagatgcagatctttgtgaagaccctcac 93195
>gb|M62405.1|HUMUBA52A Human ubiquitin/52 residue ribosomal protein fusion gene, complete sequence Length = 948 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 354 gagatgcagatctttgtgaagaccctcac 382
>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds Length = 250000 Score = 58.0 bits (29), Expect = 5e-06 Identities = 29/29 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||||||||||| Sbjct: 229540 gagatgcagatctttgtgaagaccctcac 229568
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 56.0 bits (28), Expect = 2e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||||| Sbjct: 43 agatgcagatctttgtgaagaccctcac 70 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 1184 gatgcagatcttcgtgaagaccct 1207
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 56.0 bits (28), Expect = 2e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||||| Sbjct: 31 agatgcagatctttgtgaagaccctcac 58 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| || ||||||||||||| Sbjct: 261 atgcagatcttcgtcaagaccctcaccg 288
>gb|AF429430.1|AF429430 Olea europaea polyubiquitin OUB2 mRNA, complete cds Length = 1666 Score = 56.0 bits (28), Expect = 2e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||| Sbjct: 310 atgcagatctttgtgaagaccctcaccg 337
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 56.0 bits (28), Expect = 2e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||||||| Sbjct: 750 atgcagatctttgtgaagaccctcaccg 777 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 522 atgcagatcttcgtgaagaccctcaccg 549 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 294 atgcagatcttcgtgaagaccctcaccg 321 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 ||||||||||||| || ||||||||||||| Sbjct: 64 agatgcagatcttcgtaaagaccctcaccg 93
>ref|XM_848237.1| PREDICTED: Canis familiaris similar to ubiquitin C (LOC610695), mRNA Length = 501 Score = 54.0 bits (27), Expect = 8e-05 Identities = 27/27 (100%) Strand = Plus / Plus Query: 85 tgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||||||| Sbjct: 59 tgcagatctttgtgaagaccctcaccg 85
>ref|XM_527693.1| PREDICTED: Pan troglodytes similar to ubiquitin A-52 residue ribosomal protein fusion product 1 (LOC472318), mRNA Length = 486 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccctcac 26
>gb|AY751539.1| Cloning vector pHUE, complete sequence Length = 5942 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 168 atgcagatctttgtgaagaccctcac 193
>ref|XM_586525.2| PREDICTED: Bos taurus polyubiquitin, transcript variant 1 (UBC), mRNA Length = 2416 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874972.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 17 (UBC), mRNA Length = 2588 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 9 atgcagatctttgtgaagaccctcac 34
>ref|XM_874894.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 16 (UBC), mRNA Length = 2416 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874811.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 15 (UBC), mRNA Length = 2416 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874725.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 14 (UBC), mRNA Length = 2644 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874640.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 13 (UBC), mRNA Length = 2644 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_875701.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 26 (UBC), mRNA Length = 2580 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccctcac 26
>ref|XM_875631.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 25 (UBC), mRNA Length = 2644 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_875556.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 24 (UBC), mRNA Length = 2580 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccctcac 26
>ref|XM_875261.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 20 (UBC), mRNA Length = 2643 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_875198.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 19 (UBC), mRNA Length = 2588 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 9 atgcagatctttgtgaagaccctcac 34
>ref|XM_875130.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 18 (UBC), mRNA Length = 2825 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_875488.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 23 (UBC), mRNA Length = 2644 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_875413.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 22 (UBC), mRNA Length = 2644 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_875335.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 21 (UBC), mRNA Length = 2659 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874550.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 12 (UBC), mRNA Length = 2188 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874473.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 11 (UBC), mRNA Length = 2415 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874390.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 10 (UBC), mRNA Length = 2415 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874317.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 9 (UBC), mRNA Length = 2416 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_874230.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 8 (UBC), mRNA Length = 2613 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccctcac 26
>ref|XM_874142.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 7 (UBC), mRNA Length = 2172 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 9 atgcagatctttgtgaagaccctcac 34
>ref|XM_874048.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 6 (UBC), mRNA Length = 1904 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 9 atgcagatctttgtgaagaccctcac 34
>ref|XM_873963.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 5 (UBC), mRNA Length = 1883 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_864638.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 3 (UBC), mRNA Length = 2872 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>ref|XM_878714.1| PREDICTED: Bos taurus similar to ribosomal protein S27a, transcript variant 2 (LOC615199), mRNA Length = 1172 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 16 gagatgcagatctttgtgaagaccct 41
>ref|NM_001035248.1| Canis familiaris ubiquitin-ribosomal protein L40 fusion protein (UB-RPL40), mRNA Length = 476 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 50 gagatgcagatctttgtgaagaccct 75
>ref|NM_001033930.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), transcript variant 1, mRNA Length = 2823 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 115 atgcagatctttgtgaagaccctcac 140
>ref|NM_003333.3| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), transcript variant 2, mRNA Length = 2801 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 93 atgcagatctttgtgaagaccctcac 118
>gb|AY563026.1| Ovis aries ubiqitin RPL40 fusion protein mRNA, complete cds Length = 484 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccctcac 26
>ref|XM_533870.2| PREDICTED: Canis familiaris ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), mRNA Length = 661 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 172 gagatgcagatctttgtgaagaccct 197
>gb|DQ479851.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52) gene, complete cds Length = 9411 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 3253 atgcagatctttgtgaagaccctcac 3278
>gb|BC019044.1| Homo sapiens cDNA clone IMAGE:4635339, **** WARNING: chimeric clone **** Length = 2503 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 723 atgcagatctttgtgaagaccctcac 698
>emb|AJ271129.1|PAB271129 Picea abies mRNA for putative polyubiquitin, (pPA0031 gene) Length = 1020 Score = 52.0 bits (26), Expect = 3e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||||||||||| Sbjct: 71 agatgcagatctttgtcaagaccctcaccg 100 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 |||||||||||||| |||||||| Sbjct: 529 atgcagatctttgtaaagaccct 551
>emb|CR857299.1| Pongo pygmaeus mRNA; cDNA DKFZp469J2422 (from clone DKFZp469J2422) Length = 554 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 65 atgcagatctttgtgaagaccctcac 90
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 31910 atgcagatctttgtgaagaccctcac 31935 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 27931 atgcagatctttgtgaagaccctcac 27956 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 27703 atgcagatctttgtgaagaccctcac 27728 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||| ||||||||||| Sbjct: 32138 atgcagatctttgttaagaccctcac 32163
>emb|CR624915.1| full-length cDNA clone CS0DE004YN17 of Placenta of Homo sapiens (human) Length = 1187 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 738 atgcagatctttgtgaagaccctcac 763
>emb|CR605557.1| full-length cDNA clone CS0DI053YA13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 490 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 13 atgcagatctttgtgaagaccctcac 38
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 58530 atgcagatctttgtgaagaccctcac 58505 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 58302 atgcagatctttgtgaagaccctcac 58277 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 54323 atgcagatctttgtgaagaccctcac 54298 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||| ||||||||||| Sbjct: 54095 atgcagatctttgttaagaccctcac 54070
>ref|NM_167065.1| Drosophila melanogaster CG32744-PA (CG32744) mRNA, complete cds Length = 1913 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 370 atgcagatctttgtgaagaccctcac 395 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||| ||||||||||| Sbjct: 598 atgcagatctttgttaagaccctcac 623
>ref|NM_132078.1| Drosophila melanogaster CG11700-RA (CG11700), mRNA Length = 1058 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 837 atgcagatctttgtgaagaccctcac 862 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 609 atgcagatctttgtgaagaccctcac 634
>gb|BC102248.1| Bos taurus cDNA clone MGC:127041 IMAGE:7941775, complete cds Length = 626 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 35 gagatgcagatctttgtgaagaccct 60
>dbj|AB168934.1| Macaca fascicularis testis cDNA, clone: QtsA-15896, similar to human ubiquitin A-52 residue ribosomal protein fusionproduct 1 (UBA52), mRNA, RefSeq: NM_003333.2 Length = 551 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 52 atgcagatctttgtgaagaccctcac 77
>gb|AF348700.1|AF348700 Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), mRNA, complete cds Length = 536 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 42 atgcagatctttgtgaagaccctcac 67
>gb|AY228477.1| Anas platyrhynchos polyubiquitin gene, partial cds Length = 345 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 109 atgcagatctttgtgaagaccctcac 134
>gb|AY842446.1| Bubalus bubalis ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 543 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 30 gagatgcagatctttgtgaagaccct 55
>ref|NM_001009286.1| Ovis aries ubiqitin RPL40 fusion protein (OVUBQ-L40), mRNA Length = 484 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccctcac 26
>ref|NM_214211.1| Sus scrofa ubiquitin/ribosomal fusion protein (UBA52), mRNA Length = 524 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 33 gagatgcagatctttgtgaagaccct 58
>dbj|AB182939.1| Populus nigra PnUB1 mRNA for polyubiquitin, complete cds Length = 1146 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 913 atgcagatctttgtgaagaccctcac 938 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||||||||| ||||| ||||||| Sbjct: 685 atgcagatctttgtcaagacactcaccg 712
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 48389 atgcagatctttgtgaagaccctcac 48364 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 48161 atgcagatctttgtgaagaccctcac 48136 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 44182 atgcagatctttgtgaagaccctcac 44157 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||| ||||||||||| Sbjct: 43954 atgcagatctttgttaagaccctcac 43929
>dbj|AB098957.1| Bos taurus mRNA for similar to ubiquitin/ribosomal fusion protein, partial cds, clone: ORCS10973 Length = 502 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 10 gagatgcagatctttgtgaagaccct 35
>gb|AC005253.1|AC005253 Homo sapiens chromosome 19, cosmid R26445, complete sequence Length = 39760 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 27565 atgcagatctttgtgaagaccctcac 27590
>gb|BC101830.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant 1, mRNA (cDNA clone MGC:126879 IMAGE:8069336), complete cds Length = 506 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 59 atgcagatctttgtgaagaccctcac 84
>gb|BC101832.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant 1, mRNA (cDNA clone MGC:126881 IMAGE:8069338), complete cds Length = 506 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 59 atgcagatctttgtgaagaccctcac 84
>gb|U72496.1|SSU72496 Sus scrofa ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 524 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 33 gagatgcagatctttgtgaagaccct 58
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 812 atgcagatctttgtgaagaccctcac 837 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagac 103 |||||||||||||||||||| Sbjct: 584 atgcagatctttgtgaagac 603 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagac 103 |||||||||||||||||||| Sbjct: 356 atgcagatctttgtgaagac 375
>emb|Z49056.1|CJUBIQ C.jacchus mRNA for ubiquitin Length = 189 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccctcac 26
>emb|AJ388512.1|CFA388512 Canis familiaris mRNA for ubiquitin-ribosomal protein L40, fusion protein Length = 476 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||||| Sbjct: 50 gagatgcagatctttgtgaagaccct 75
>emb|X56999.1|HSUBA52P Human UbA52 placental mRNA for ubiquitin-52 amino acid fusion protein Length = 501 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 19 atgcagatctttgtgaagaccctcac 44
>emb|X56998.1|HSUBA52A Human UbA52 adrenal mRNA for ubiquitin-52 amino acid fusion protein Length = 495 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 10 atgcagatctttgtgaagaccctcac 35
>emb|X56997.1|HSUBA52G Human UbA52 gene coding for ubiquitin-52 amino acid fusion protein Length = 4555 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||||||| Sbjct: 2371 atgcagatctttgtgaagaccctcac 2396
>gb|DQ216253.1| Taeniopygia guttata clone 0058P0031B03 ubiquitin C variant 14-like mRNA, complete sequence Length = 1327 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 524 gatgcagatctttgtgaagaccctgaccg 552 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 42.1 bits (21), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||| ||||||||||| |||| Sbjct: 296 gatgcagatcttcgtgaagaccctgaccg 324
>gb|DQ216252.1| Taeniopygia guttata clone 0058P0005E02 ubiquitin C variant 12-like mRNA, complete sequence Length = 1378 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 296 gatgcagatctttgtgaagaccctgaccg 324 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 980 gatgcagatcttcgtgaagaccct 1003
>gb|DQ216249.1| Taeniopygia guttata clone 0058P0031D03 ubiquitin C variant 9-like mRNA, complete sequence Length = 1327 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 524 gatgcagatctttgtgaagaccctgaccg 552 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 42.1 bits (21), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||| ||||||||||| |||| Sbjct: 296 gatgcagatcttcgtgaagaccctgaccg 324
>gb|DQ216247.1| Taeniopygia guttata clone 0058P0020E12 ubiquitin C variant 7-like mRNA, complete sequence Length = 1383 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 752 gatgcagatctttgtgaagaccctgaccg 780 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 524 gatgcagatctttgtgaagaccctgaccg 552 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 42.1 bits (21), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||| ||||||||||| |||| Sbjct: 296 gatgcagatcttcgtgaagaccctgaccg 324
>gb|DQ216246.1| Taeniopygia guttata clone 0058P0016A01 ubiquitin C variant 7-like mRNA, complete sequence Length = 1377 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 752 gatgcagatctttgtgaagaccctgaccg 780 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 524 gatgcagatctttgtgaagaccctgaccg 552 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 42.1 bits (21), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||| ||||||||||| |||| Sbjct: 296 gatgcagatcttcgtgaagaccctgaccg 324
>gb|DQ216236.1| Taeniopygia guttata clone 0058P0054D08 ubiquitin C variant 1-like mRNA, complete sequence Length = 1150 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||||||||||| |||| Sbjct: 524 gatgcagatctttgtgaagaccctgaccg 552 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 69 atgcagatctttgtgaagaccctgaccg 96
>gb|AC099535.2| Homo sapiens chromosome 3 clone RP11-2G22, complete sequence Length = 181720 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 |||| |||||||||||||||||||||||| Sbjct: 153176 gagacgcagatctttgtgaagaccctcac 153204
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||| ||||||| Sbjct: 4175 gatgcagatctttgtgaagactctcaccg 4203
>gb|AC137675.2| Homo sapiens chromosome 3 clone RP11-358O21, complete sequence Length = 163004 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 81 gagatgcagatctttgtgaagaccctcac 109 |||| |||||||||||||||||||||||| Sbjct: 72682 gagacgcagatctttgtgaagaccctcac 72710
>ref|NM_120402.2| Arabidopsis thaliana UBQ3 (POLYUBIQUITIN 3); protein binding AT5G03240 (UBQ3) transcript variant AT5G03240.2 mRNA, complete cds Length = 1414 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 954 atgcagatctttgtgaagacccttaccg 981
>ref|NM_180698.1| Arabidopsis thaliana UBQ3 (POLYUBIQUITIN 3); protein binding AT5G03240 (UBQ3) transcript variant AT5G03240.1 mRNA, complete cds Length = 1234 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 774 atgcagatctttgtgaagacccttaccg 801
>ref|NM_001036747.1| Arabidopsis thaliana UBQ3 (POLYUBIQUITIN 3); protein binding AT5G03240 (UBQ3) transcript variant AT5G03240.3 mRNA, complete cds Length = 1589 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 1102 atgcagatctttgtgaagacccttaccg 1129
>ref|XM_473982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 685 atgcagatcttcgtgaagaccctcaccg 712 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 457 atgcagatctttgtgaagaccct 479 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 913 atgcagatcttcgtgaagaccctcac 938
>gb|DQ216248.1| Taeniopygia guttata clone 0058P0029E05 ubiquitin C variant 8-like mRNA, complete sequence Length = 1378 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 296 gatgcagatctttgtgaagaccct 319 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 980 gatgcagatcttcgtgaagaccct 1003
>gb|DQ216245.1| Taeniopygia guttata clone 0065P0025D10 ubiquitin C variant 5-like mRNA, complete sequence Length = 1438 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 185 gatgcagatctttgtgaagaccct 208 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 869 gatgcagatcttcgtgaagaccct 892 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||| ||||| Sbjct: 413 gatgcagatctttgtgaaaaccct 436
>gb|DQ216244.1| Taeniopygia guttata clone 0058P0008C01 ubiquitin C variant 4-like mRNA, complete sequence Length = 713 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 412 gatgcagatctttgtgaagaccct 435 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||| ||||| Sbjct: 184 gatgcagatctttgtgaaaaccct 207
>gb|DQ216243.1| Taeniopygia guttata clone 0058P0010H02 ubiquitin C variant 4-like mRNA, complete sequence Length = 806 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 485 gatgcagatctttgtgaagaccct 508 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||| ||||| Sbjct: 257 gatgcagatctttgtgaaaaccct 280
>gb|DQ216242.1| Taeniopygia guttata clone 0058P0038G08 ubiquitin C variant 4-like mRNA, complete sequence Length = 806 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 473 gatgcagatctttgtgaagaccct 496 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||| ||||| Sbjct: 245 gatgcagatctttgtgaaaaccct 268
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 980 gatgcagatctttgtgaagaccct 1003 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 752 gatgcagatctttgtgaagaccct 775 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 69 atgcagatctttgtgaagaccctgaccg 96
>gb|DQ216240.1| Taeniopygia guttata clone 0061P0001C12 ubiquitin C variant 2-like mRNA, complete sequence Length = 1530 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 981 gatgcagatctttgtgaagaccct 1004 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 69 atgcagatctttgtgaagaccctgaccg 96
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 980 gatgcagatctttgtgaagaccct 1003 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 752 gatgcagatctttgtgaagaccct 775 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 69 atgcagatctttgtgaagaccctgaccg 96
>gb|DQ216237.1| Taeniopygia guttata clone 0058P0020B09 ubiquitin C variant 1-like mRNA, complete sequence Length = 1346 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 524 gatgcagatctttgtgaagaccct 547 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 ||||||||| |||||||||||||| Sbjct: 752 gatgcagatttttgtgaagaccct 775
>gb|DQ216235.1| Taeniopygia guttata clone 0058P0048G02 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 69 atgcagatctttgtgaagaccctgaccg 96 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 754 atgcagatctttgtgaagaccct 776
>gb|DQ216234.1| Taeniopygia guttata clone 0058P0013A07 ubiquitin C variant 1-like mRNA, complete sequence Length = 1347 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 524 gatgcagatctttgtgaagaccct 547 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 ||||||||| |||||||||||||| Sbjct: 752 gatgcagatttttgtgaagaccct 775
>gb|DQ216233.1| Taeniopygia guttata clone 0063P0008C04 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 524 gatgcagatctttgtgaagaccct 547 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 752 gatgcagatcttcgtgaagaccct 775
>gb|DQ216232.1| Taeniopygia guttata clone 0058P0060G06 ubiquitin C variant 1-like mRNA, complete sequence Length = 1306 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 524 gatgcagatctttgtgaagaccct 547 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||| ||||||||||| Sbjct: 753 gatgcagatcttcgtgaagaccct 776
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Minus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||| ||||| Sbjct: 31077 agatgcagatctttgtgaagacactcac 31050 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 30854 atgcagatctttgtgaagacc 30834
>ref|NM_001033865.1| Mus musculus ribosomal protein S27a (Rps27a), transcript variant 2, mRNA Length = 821 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 312 gatgcagatctttgtgaagaccct 335
>ref|NM_024277.2| Mus musculus ribosomal protein S27a (Rps27a), transcript variant 1, mRNA Length = 726 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 217 gatgcagatctttgtgaagaccct 240
>gb|AF285162.1| Mus musculus cell-line C3H/RV polyubiquitin C (Ubc) gene, complete cds Length = 4212 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2154 gatgcagatctttgtgaagaccct 2177 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3979 atgcagatctttgtgaagaccct 4001 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3751 atgcagatctttgtgaagaccct 3773 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3523 atgcagatctttgtgaagaccct 3545 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3295 atgcagatctttgtgaagaccct 3317 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3067 atgcagatctttgtgaagaccct 3089 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2611 atgcagatctttgtgaagaccct 2633 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1927 atgcagatctttgtgaagaccct 1949 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1699 atgcagatctttgtgaagaccct 1721 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||| ||||| Sbjct: 2382 gatgcagatctttgtgaaaaccct 2405 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||| ||||| Sbjct: 2839 atgcagatctttgtgaaaaccct 2861
>gb|AF285161.1| Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete cds Length = 3756 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 3294 gatgcagatctttgtgaagaccct 3317 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3523 atgcagatctttgtgaagaccct 3545 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3067 atgcagatctttgtgaagaccct 3089 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2839 atgcagatctttgtgaagaccct 2861 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2611 atgcagatctttgtgaagaccct 2633 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2155 atgcagatctttgtgaagaccct 2177 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1927 atgcagatctttgtgaagaccct 1949 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1699 atgcagatctttgtgaagaccct 1721 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||| ||||| Sbjct: 2383 atgcagatctttgtgaaaaccct 2405
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 64689 gatgcagatctttgtgaagaccct 64712
>ref|XM_992591.1| PREDICTED: Mus musculus similar to ribosomal protein S27a (LOC619900), mRNA Length = 568 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 46 gatgcagatctttgtgaagaccct 69
>ref|XM_884518.2| PREDICTED: Mus musculus similar to ribosomal protein S27a (LOC619900), mRNA Length = 568 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 46 gatgcagatctttgtgaagaccct 69
>ref|XM_001004633.1| PREDICTED: Mus musculus similar to ribosomal protein S27a (LOC677303), mRNA Length = 568 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 46 gatgcagatctttgtgaagaccct 69
>ref|XR_003008.1| PREDICTED: Mus musculus similar to ubiquitin B precursor (LOC625981), mRNA Length = 574 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 49 gatgcagatctttgtgaagaccct 72
>ref|XM_001002242.1| PREDICTED: Mus musculus similar to ribosomal protein S27a (LOC667035), mRNA Length = 573 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 49 gatgcagatctttgtgaagaccct 72
>ref|XM_925360.2| PREDICTED: Mus musculus similar to ribosomal protein S27a, transcript variant 2 (LOC639567), mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 49 gatgcagatctttgtgaagaccct 72
>ref|XM_973010.1| PREDICTED: Mus musculus ubiquitin C (Ubc), mRNA Length = 2310 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1690 gatgcagatctttgtgaagaccct 1713 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1234 gatgcagatctttgtgaagaccct 1257 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 778 gatgcagatctttgtgaagaccct 801 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2147 atgcagatctttgtgaagaccct 2169 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1919 atgcagatctttgtgaagaccct 1941 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1463 atgcagatctttgtgaagaccct 1485 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1007 atgcagatctttgtgaagaccct 1029 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 551 atgcagatctttgtgaagaccct 573
>ref|XM_973533.1| PREDICTED: Mus musculus similar to ribosomal protein S27a (LOC636402), mRNA Length = 558 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 45 gatgcagatctttgtgaagaccct 68
>ref|XM_973311.1| PREDICTED: Mus musculus similar to ribosomal protein S27a (LOC664894), mRNA Length = 558 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 45 gatgcagatctttgtgaagaccct 68
>ref|XM_911787.2| PREDICTED: Mus musculus similar to ribosomal protein S27a (LOC636402), mRNA Length = 558 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 45 gatgcagatctttgtgaagaccct 68
>gb|BC025894.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5055216), complete cds Length = 1213 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 509 gatgcagatctttgtgaagaccct 532 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 966 atgcagatctttgtgaagaccct 988 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 738 atgcagatctttgtgaagaccct 760 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 282 atgcagatctttgtgaagaccct 304
>gb|BC021837.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:30231 IMAGE:5123918), complete cds Length = 2120 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1416 gatgcagatctttgtgaagaccct 1439 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 960 gatgcagatctttgtgaagaccct 983 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 504 gatgcagatctttgtgaagaccct 527 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1873 atgcagatctttgtgaagaccct 1895 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1645 atgcagatctttgtgaagaccct 1667 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1189 atgcagatctttgtgaagaccct 1211 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 733 atgcagatctttgtgaagaccct 755 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 277 atgcagatctttgtgaagaccct 299
>gb|BC006680.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:7811 IMAGE:3500023), complete cds Length = 1891 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1417 gatgcagatctttgtgaagaccct 1440 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 961 gatgcagatctttgtgaagaccct 984 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 505 gatgcagatctttgtgaagaccct 528 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1646 atgcagatctttgtgaagaccct 1668 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1190 atgcagatctttgtgaagaccct 1212 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 734 atgcagatctttgtgaagaccct 756 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 278 atgcagatctttgtgaagaccct 300
>ref|XM_782408.1| PREDICTED: Strongylocentrotus purpuratus similar to polyubiquitin (LOC582459), mRNA Length = 1701 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||||||||| ||||||||||||| Sbjct: 88 atgcagatctttgtcaagaccctcaccg 115
>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene Length = 2388 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 2102 atgcagatcttcgtgaagaccctcaccg 2129
>emb|X75628.1|ACUBIFUS A.castellanii mRNA for ubiquitin fusion protein Length = 525 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 61 atgcagatcttcgtgaagaccctcaccg 88
>emb|X64345.1|PCCUBI42 P.crispum gene Pcubi4-2 for polyubiquitin Length = 2843 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||| |||||||| Sbjct: 981 agatgcagatctttgtgaaaaccctcac 1008 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 |||||||| |||||||||||||| Sbjct: 2123 atgcagatttttgtgaagaccct 2145 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||| ||||||||||||||||| Sbjct: 1895 atgcaaatctttgtgaagaccct 1917
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||| ||||||||||||||||||| Sbjct: 3 atgcagatatttgtgaagaccctcaccg 30
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||| ||||||||||||||||||| Sbjct: 3 atgcagatatttgtgaagaccctcaccg 30
>emb|BX284634.8| Mouse DNA sequence from clone RP23-92B18 on chromosome 11 Contains the 3' end of the gene for a novel protein (C330012F17Rik, C130096N06Rik), the gene for a novel protein (2010316F05Rik), a novel gene, the Mtif2 gene for mitochondrial translational initiation factor 2, the Rps27a gene for ribosomal protein S27a, a ribosomal protein L7 (Rpl7) pseudogene, the gene for a novel protein (1700034F02Rik), a novel gene and a CpG island, complete sequence Length = 176038 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 122899 gatgcagatctttgtgaagaccct 122876
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 75224 atgcagatctttgtgaagacccttaccg 75197
>emb|AJ416499.1|POS416499 Pleurotus ostreatus partial mRNA for putative ubiquitin (ubq1 gene) Length = 729 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||||||||| ||||||||||||| Sbjct: 628 atgcagatctttgtcaagaccctcaccg 655
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 119 atgcagatctttgtgaagaccctgaccg 146
>dbj|AK168448.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920021C12 product:ubiquitin C, full insert sequence Length = 980 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 518 gatgcagatctttgtgaagaccct 541 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 747 atgcagatctttgtgaagaccct 769 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 291 atgcagatctttgtgaagaccct 313
>dbj|AK018706.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610006J14 product:ribosomal protein S27a, full insert sequence Length = 543 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 39 gatgcagatctttgtgaagaccct 62
>dbj|AK010964.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510015A11 product:POLYUBIQUITIN (UBIQUITIN B) homolog [Mus musculus], full insert sequence Length = 1208 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 746 gatgcagatctttgtgaagaccct 769 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 975 atgcagatctttgtgaagaccct 997 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 519 atgcagatctttgtgaagaccct 541 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 291 atgcagatctttgtgaagaccct 313
>gb|BC096392.1| Mus musculus ribosomal protein S27a, mRNA (cDNA clone MGC:106981 IMAGE:1380923), complete cds Length = 630 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 31 gatgcagatctttgtgaagaccct 54
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 31998355 atgcagatcttcgtgaagaccctcaccg 31998382 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 31998127 atgcagatctttgtgaagaccct 31998149 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 31998583 atgcagatcttcgtgaagaccctcac 31998608
>gb|AF528713.1| Arabidopsis thaliana ecotype Co-1 putative polyubiquitin (UBQ13) gene, partial cds Length = 786 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||| ||||||||||||||||||| Sbjct: 316 atgcagatatttgtgaagaccctcaccg 343
>gb|AF528712.1| Arabidopsis thaliana ecotype Bla-1 putative polyubiquitin (UBQ13) gene, partial cds Length = 786 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||| ||||||||||||||||||| Sbjct: 316 atgcagatatttgtgaagaccctcaccg 343
>gb|AF528711.1| Arabidopsis thaliana ecotype Cvi-0 putative polyubiquitin (UBQ13) gene, partial cds Length = 786 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||| ||||||||||||||||||| Sbjct: 316 atgcagatatttgtgaagaccctcaccg 343
>gb|AF528678.1| Arabidopsis lyrata putative polyubiquitin gene, partial cds Length = 940 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 430 atgcagatctttgtgaagacccttaccg 457 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||| ||||||||||||||||| Sbjct: 202 atgcagatttttgtgaagaccctcac 227
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Minus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||| ||||| Sbjct: 8545505 agatgcagatctttgtgaagacactcac 8545478 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 8545282 atgcagatctttgtgaagacc 8545262 Score = 42.1 bits (21), Expect = 0.32 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccct 106 ||||||||||||| ||||||||||| Sbjct: 3475015 agatgcagatcttcgtgaagaccct 3475039
>gb|DQ011576.1| Euphorbia characias polyubiquitin mRNA, partial cds Length = 1100 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 415 atgcagatctttgtgaagaccctgaccg 442
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 780 atgcagatctttgtgaagaccctgaccg 807 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| ||||||||||| |||| Sbjct: 552 atgcagatcttcgtgaagaccctgaccg 579 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| ||||||||||| |||| Sbjct: 324 atgcagatcttcgtgaagaccctgaccg 351
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 780 atgcagatctttgtgaagaccctgaccg 807 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| ||||||||||| |||| Sbjct: 552 atgcagatcttcgtgaagaccctgaccg 579 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| ||||||||||| |||| Sbjct: 324 atgcagatcttcgtgaagaccctgaccg 351
>gb|BT002420.1| Arabidopsis thaliana polyubiquitin (UBQ3) (At5g03240) mRNA, complete cds Length = 1230 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 769 atgcagatctttgtgaagacccttaccg 796
>gb|AY954394.1| Oryza sativa (japonica cultivar-group) polyubiquitin (rubi3) gene, promoter region and complete cds Length = 3733 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 3201 atgcagatcttcgtgaagaccctcaccg 3228 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2973 atgcagatctttgtgaagaccct 2995 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 3429 atgcagatcttcgtgaagaccctcac 3454
>dbj|D10432.1|RICK37 Oryza sativa mRNA for ubiquitin (K37 gene), partial sequence Length = 413 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 111 atgcagatcttcgtgaagaccctcaccg 138 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 338 atgcagatcttcgtgaagaccctcac 363
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Minus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||| ||||| Sbjct: 17370 agatgcagatctttgtgaagacactcac 17343 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 17140 atgcagatctttgtgaagacc 17120
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Minus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||| ||||| Sbjct: 145234 agatgcagatctttgtgaagacactcac 145207 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 145004 atgcagatctttgtgaagacc 144984
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 46363 atgcagatctttgtgaagacccttaccg 46336
>dbj|AK102389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E11, full insert sequence Length = 2497 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 1894 atgcagatcttcgtgaagaccctcaccg 1921 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1666 atgcagatctttgtgaagaccct 1688 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 2122 atgcagatcttcgtgaagaccctcac 2147
>gb|BC002108.1| Mus musculus ribosomal protein S27a, mRNA (cDNA clone MGC:6601 IMAGE:3487291), complete cds Length = 546 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 27 gatgcagatctttgtgaagaccct 50
>dbj|AK058319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A10, full insert sequence Length = 1421 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 752 atgcagatcttcgtgaagaccctcaccg 779 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 980 atgcagatcttcgtgaagaccctcac 1005 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 |||||||||||||| |||||||| Sbjct: 524 atgcagatctttgtaaagaccct 546
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 4378 gatgcagatctttgtgaagaccct 4355 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 3922 gatgcagatctttgtgaagaccct 3899 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 3466 gatgcagatctttgtgaagaccct 3443 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 4605 atgcagatctttgtgaagaccct 4583 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 4149 atgcagatctttgtgaagaccct 4127 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3693 atgcagatctttgtgaagaccct 3671 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3237 atgcagatctttgtgaagaccct 3215 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 3009 atgcagatctttgtgaagaccct 2987
>dbj|D50527.1|MUSTI225D Mus musculus mRNA for TI-225, complete cds Length = 498 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 265 gatgcagatctttgtgaagaccct 288
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 7881 gatgcagatctttgtgaagaccct 7904 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 6969 gatgcagatctttgtgaagaccct 6992 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 6741 gatgcagatctttgtgaagaccct 6764 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 6513 gatgcagatctttgtgaagaccct 6536 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 6285 gatgcagatctttgtgaagaccct 6308 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 6058 atgcagatctttgtgaagaccct 6080 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 ||||||||||||||| |||||||| Sbjct: 7653 gatgcagatctttgtaaagaccct 7676 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||| ||||| Sbjct: 7425 gatgcagatctttgtgaaaaccct 7448 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 ||||||||||||||| |||||||| Sbjct: 7197 gatgcagatctttgtaaagaccct 7220
>dbj|D12776.1|RICPOLYUBI Oryza sativa (japonica cultivar-group) mRNA for poly-ubiquitin, partial cds Length = 744 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 109 atgcagatcttcgtgaagaccctcaccg 136 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 337 atgcagatcttcgtgaagaccctcac 362
>dbj|AB003732.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 3273 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 3017 gatgcagatctttgtgaagaccct 3040 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2789 gatgcagatctttgtgaagaccct 2812 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2561 gatgcagatctttgtgaagaccct 2584 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2333 gatgcagatctttgtgaagaccct 2356 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2105 gatgcagatctttgtgaagaccct 2128 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1877 gatgcagatctttgtgaagaccct 1900 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1649 gatgcagatctttgtgaagaccct 1672 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1421 gatgcagatctttgtgaagaccct 1444 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1193 gatgcagatctttgtgaagaccct 1216 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 965 gatgcagatctttgtgaagaccct 988 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 737 gatgcagatctttgtgaagaccct 760 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 509 gatgcagatctttgtgaagaccct 532 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 281 gatgcagatctttgtgaagaccct 304 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 54 atgcagatctttgtgaagaccct 76
>dbj|AB003731.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 2817 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2561 gatgcagatctttgtgaagaccct 2584 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2333 gatgcagatctttgtgaagaccct 2356 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 2105 gatgcagatctttgtgaagaccct 2128 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1877 gatgcagatctttgtgaagaccct 1900 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1649 gatgcagatctttgtgaagaccct 1672 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1421 gatgcagatctttgtgaagaccct 1444 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 1193 gatgcagatctttgtgaagaccct 1216 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 965 gatgcagatctttgtgaagaccct 988 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 737 gatgcagatctttgtgaagaccct 760 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 509 gatgcagatctttgtgaagaccct 532 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 281 gatgcagatctttgtgaagaccct 304 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 54 atgcagatctttgtgaagaccct 76
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||||||||||| Sbjct: 19062 atgcagatcttcgtgaagaccctcaccg 19089 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 18834 atgcagatctttgtgaagaccct 18856 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 19290 atgcagatcttcgtgaagaccctcac 19315
>ref|NM_019639.3| Mus musculus ubiquitin C (Ubc), mRNA Length = 2779 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 721 gatgcagatctttgtgaagaccct 744 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2546 atgcagatctttgtgaagaccct 2568 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2318 atgcagatctttgtgaagaccct 2340 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2090 atgcagatctttgtgaagaccct 2112 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1862 atgcagatctttgtgaagaccct 1884 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1634 atgcagatctttgtgaagaccct 1656 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1178 atgcagatctttgtgaagaccct 1200 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 494 atgcagatctttgtgaagaccct 516 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 266 atgcagatctttgtgaagaccct 288 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||| ||||| Sbjct: 949 gatgcagatctttgtgaaaaccct 972 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||| ||||| Sbjct: 1406 atgcagatctttgtgaaaaccct 1428
>gb|BC081446.1| Mus musculus ribosomal protein S27a, transcript variant 2, mRNA (cDNA clone MGC:102036 IMAGE:6408051), complete cds Length = 543 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 18 gatgcagatctttgtgaagaccct 41
>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence Length = 166132 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 99501 gatgcagatctttgtgaagaccct 99478
>gb|U82086.1|FAU82086 Fragaria ananassa polyubiquitin (FUBI1) mRNA, complete cds Length = 1374 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 938 atgcagatctttgtgaagacccttaccg 965 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||| ||||||||||| Sbjct: 710 atgcagatctttgttaagaccctcac 735 Score = 38.2 bits (19), Expect = 5.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcac 109 ||||||||||||||| ||||| ||||| Sbjct: 481 gatgcagatctttgtaaagactctcac 507
>gb|L05363.1|ATHUBQC Arabidopsis thaliana polyubiquitin (ubq3) gene Length = 3059 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||||||| |||| Sbjct: 2415 atgcagatctttgtgaagacccttaccg 2442
>emb|AL669981.11| Mouse DNA sequence from clone RP23-335B9 on chromosome 4, complete sequence Length = 222981 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 gatgcagatctttgtgaagaccct 106 |||||||||||||||||||||||| Sbjct: 195592 gatgcagatctttgtgaagaccct 195569
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 48.1 bits (24), Expect = 0.005 Identities = 27/28 (96%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcac 109 |||||||||||||||||||||| ||||| Sbjct: 16443 agatgcagatctttgtgaagactctcac 16470 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 16901 atgcagatcttcgtgaagaccct 16923
>gb|DQ216251.1| Taeniopygia guttata clone 0063P0020H09 ubiquitin C variant 10-like mRNA, complete sequence Length = 716 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 142 atgcagatctttgtgaagaccct 164
>gb|DQ216250.1| Taeniopygia guttata clone 0058P0027F01 ubiquitin C variant 9-like mRNA, complete sequence Length = 1074 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 42.1 bits (21), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcaccg 111 |||||||||||| ||||||||||| |||| Sbjct: 296 gatgcagatcttcgtgaagaccctgaccg 324
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 768 atgcagatctttgtgaagaccct 790 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||||||||| ||||| Sbjct: 312 atgcagatctttgtgaagacactcac 337 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 84 atgcagatcttcgtgaagaccct 106
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 756 atgcagatctttgtgaagaccct 778 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||||| ||||| |||| Sbjct: 70 agatgcagatctttgtgaaaaccctgaccg 99 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| ||||||||||| |||| Sbjct: 528 atgcagatcttcgtgaagaccctgaccg 555 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||| ||||| |||| Sbjct: 300 atgcagatctttgtgaaaaccctgaccg 327
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1020 atgcagatctttgtgaagaccct 1042 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||||||||| ||||| |||| Sbjct: 564 atgcagatctttgtgaaaaccctgaccg 591
>ref|XM_415847.1| PREDICTED: Gallus gallus similar to polyubiquitin (LOC417602), mRNA Length = 1413 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 419 atgcagatctttgtgaagaccct 441 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 191 atgcagatctttgtgaagaccct 213 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 875 atgcagatcttcgtgaagaccct 897
>ref|XM_875774.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 27 (UBC), mRNA Length = 2458 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cagatctttgtgaagaccctcac 109 ||||||||||||||||||||||| Sbjct: 1 cagatctttgtgaagaccctcac 23
>gb|DQ473431.1| Anser anser breed Landoise polyubiquitin mRNA, complete cds Length = 1148 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 91 atgcagatctttgtgaagaccct 113
>gb|AY478418.1| Clusia minor polyubiquitin (Ubq1) mRNA, partial cds Length = 750 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 315 atgcagatctttgtgaagaccct 337 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||||||||| ||||||||||| Sbjct: 87 atgcagatctttgttaagaccctcac 112
>ref|XR_003577.1| PREDICTED: Mus musculus similar to polyubiquitin (LOC671817), mRNA Length = 926 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 485 atgcagatctttgtgaagaccct 507 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 256 atgcagatcttcgtgaagaccct 278 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 28 atgcagatcttcgtgaagaccct 50
>ref|XM_001001910.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 4 (Ubc), mRNA Length = 794 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 550 atgcagatctttgtgaagaccct 572
>ref|XM_001001919.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 3 (Ubc), mRNA Length = 794 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 550 atgcagatctttgtgaagaccct 572
>ref|XM_001001949.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 8 (Ubc), mRNA Length = 1354 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1110 atgcagatctttgtgaagaccct 1132 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 882 atgcagatctttgtgaagaccct 904
>ref|XM_001001988.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 4 (Ubc), mRNA Length = 1250 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1006 atgcagatctttgtgaagaccct 1028 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 778 atgcagatctttgtgaagaccct 800 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 550 atgcagatctttgtgaagaccct 572
>ref|XM_001002029.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 18 (Ubc), mRNA Length = 2266 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2022 atgcagatctttgtgaagaccct 2044 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1794 atgcagatctttgtgaagaccct 1816 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1566 atgcagatctttgtgaagaccct 1588 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1338 atgcagatctttgtgaagaccct 1360 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1110 atgcagatctttgtgaagaccct 1132 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 882 atgcagatctttgtgaagaccct 904
>ref|XM_001002019.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 25 (Ubc), mRNA Length = 1676 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1432 atgcagatctttgtgaagaccct 1454 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1204 atgcagatctttgtgaagaccct 1226 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 976 atgcagatctttgtgaagaccct 998 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 748 atgcagatctttgtgaagaccct 770 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 520 atgcagatctttgtgaagaccct 542 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 292 atgcagatctttgtgaagaccct 314
>ref|XM_001002053.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 22 (Ubc), mRNA Length = 1931 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1687 atgcagatctttgtgaagaccct 1709 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1459 atgcagatctttgtgaagaccct 1481 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1231 atgcagatctttgtgaagaccct 1253 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1003 atgcagatctttgtgaagaccct 1025 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 775 atgcagatctttgtgaagaccct 797 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 547 atgcagatctttgtgaagaccct 569 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 319 atgcagatctttgtgaagaccct 341
>ref|XM_001002045.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 29 (Ubc), mRNA Length = 2494 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2250 atgcagatctttgtgaagaccct 2272 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2022 atgcagatctttgtgaagaccct 2044 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1794 atgcagatctttgtgaagaccct 1816 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1566 atgcagatctttgtgaagaccct 1588 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1338 atgcagatctttgtgaagaccct 1360 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1110 atgcagatctttgtgaagaccct 1132 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 882 atgcagatctttgtgaagaccct 904
>emb|AJ245512.1|GMO245512 Glomus mosseae partial mRNA for ubiquitin Length = 229 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1 atgcagatctttgtgaagaccct 23
>gb|BC008661.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:3598724), complete cds Length = 777 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 529 atgcagatctttgtgaagaccct 551 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 301 atgcagatctttgtgaagaccct 323
>gb|BC036303.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:2645223), complete cds Length = 1193 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 946 atgcagatctttgtgaagaccct 968 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 718 atgcagatctttgtgaagaccct 740 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 490 atgcagatctttgtgaagaccct 512 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 262 atgcagatctttgtgaagaccct 284
>gb|BC062397.1| Rattus norvegicus cDNA clone IMAGE:5623273, **** WARNING: chimeric clone **** Length = 3040 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2786 atgcagatctttgtgaagaccct 2808 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2558 atgcagatctttgtgaagaccct 2580 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2330 atgcagatctttgtgaagaccct 2352 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2102 atgcagatctttgtgaagaccct 2124 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1874 atgcagatctttgtgaagaccct 1896 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1646 atgcagatctttgtgaagaccct 1668 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1418 atgcagatctttgtgaagaccct 1440 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1190 atgcagatctttgtgaagaccct 1212 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 962 atgcagatctttgtgaagaccct 984 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 734 atgcagatctttgtgaagaccct 756 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 506 atgcagatctttgtgaagaccct 528 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 278 atgcagatctttgtgaagaccct 300
>ref|XM_784685.1| PREDICTED: Strongylocentrotus purpuratus similar to CG2960-PA (LOC584839), mRNA Length = 594 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 7 atgcagatctttgtgaagaccct 29
>emb|Y17004.1|SDO17004 Suberites domuncula mRNA for monoubiquitin Length = 625 Score = 46.1 bits (23), Expect = 0.021 Identities = 26/27 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcac 109 ||||||||||||||||||||| ||||| Sbjct: 29 gatgcagatctttgtgaagactctcac 55
>emb|Y10024.1|STUBIEP Solanum tuberosum mRNA for ubiquitin extension protein Length = 646 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 44 atgcagatctttgtgaagaccct 66
>emb|X92661.1|RNUBC5 R.norvegicus mRNA for polyubiquitin 5' end Length = 344 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 273 atgcagatctttgtgaagaccct 295
>gb|DQ123983.1| Coffea arabica x Coffea canephora clone HT-SSH3-H01 mRNA sequence Length = 611 Score = 46.1 bits (23), Expect = 0.021 Identities = 26/27 (96%) Strand = Plus / Minus Query: 83 gatgcagatctttgtgaagaccctcac 109 |||||||||||| |||||||||||||| Sbjct: 66 gatgcagatcttcgtgaagaccctcac 40 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||||||||| |||||||| |||| Sbjct: 293 atgcagatctttgtaaagacccttaccg 266
>emb|AL596386.16| Mouse DNA sequence from clone RP23-331I21 on chromosome 11 Contains the 3' end of the Myo15 gene for myosin XV, a novel gene, eleven ubiquitin pseudogenes, four poly A binding protein, cytoplasmic 4 (Pabpc4) pseudogenes and a CpG island, complete sequence Length = 201663 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 77374 atgcagatctttgtgaagaccct 77352 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 196157 atgcagatcttcgtgaagaccct 196135 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 183134 atgcagatcttcgtgaagaccct 183112 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 173926 atgcagatcttcgtgaagaccct 173904 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 158311 atgcagatcttcgtgaagaccct 158289 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 145032 atgcagatcttcgtgaagaccct 145010 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 135796 atgcagatcttcgtgaagaccct 135774 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 126586 atgcagatcttcgtgaagaccct 126564 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 117377 atgcagatcttcgtgaagaccct 117355 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 108171 atgcagatcttcgtgaagaccct 108149 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 88279 atgcagatcttcgtgaagaccct 88257
>emb|AJ437537.2|OSA437537 Oryza sativa partial mRNA for polyubiquitin-like protein (ub1 gene) Length = 660 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 458 atgcagatctttgtgaagaccct 480
>gb|DQ420617.1| Anser anser ubiquitin C II mRNA, complete cds Length = 1199 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 774 atgcagatctttgtgaagaccct 796 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 546 atgcagatctttgtgaagaccct 568 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 318 atgcagatctttgtgaagaccct 340 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 90 atgcagatctttgtgaagaccct 112
>gb|DQ420616.1| Anser anser ubiquitin C I mRNA, complete cds Length = 1191 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 774 atgcagatctttgtgaagaccct 796 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 546 atgcagatctttgtgaagaccct 568 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 318 atgcagatctttgtgaagaccct 340 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 90 atgcagatctttgtgaagaccct 112
>gb|L81139.1| Pisum sativum (Alaska) ubiquitin (PUB1) gene, complete cds Length = 2536 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1501 atgcagatctttgtgaagaccct 1523 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagac 103 |||||||||||||||||||| Sbjct: 1729 atgcagatctttgtgaagac 1748 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 |||||||| ||||| ||||||||||||| Sbjct: 1273 atgcagatatttgttaagaccctcaccg 1300 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcac 109 ||||||| |||||||| ||||||||||| Sbjct: 587 agatgcaaatctttgttaagaccctcac 614
>gb|U57603.1|GGU57603 Gallus gallus polyubiquitin (UbI) mRNA, partial cds Length = 352 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 141 atgcagatctttgtgaagaccct 163
>dbj|AK012427.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054O04 product:ubiquitin, beta-galactosidase related, full insert sequence Length = 1903 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1671 atgcagatctttgtgaagaccct 1693 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1213 atgcagatctttgtgaagaccct 1235 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 983 atgcagatctttgtgaagaccct 1005 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 755 atgcagatctttgtgaagaccct 777 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 527 atgcagatctttgtgaagaccct 549 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 69 atgcagatctttgtgaagaccct 91 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cagatctttgtgaagaccct 106 |||||||||||||||||||| Sbjct: 1446 cagatctttgtgaagaccct 1465 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cagatctttgtgaagaccct 106 |||||||||||||||||||| Sbjct: 301 cagatctttgtgaagaccct 320
>gb|BC094012.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5037932), complete cds Length = 1209 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 962 atgcagatctttgtgaagaccct 984 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 734 atgcagatctttgtgaagaccct 756 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 506 atgcagatctttgtgaagaccct 528 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 278 atgcagatctttgtgaagaccct 300
>ref|NM_017314.1| Rattus norvegicus ubiquitin C (Ubc), mRNA Length = 2545 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2314 atgcagatctttgtgaagaccct 2336 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2086 atgcagatctttgtgaagaccct 2108 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1858 atgcagatctttgtgaagaccct 1880 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1630 atgcagatctttgtgaagaccct 1652 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1402 atgcagatctttgtgaagaccct 1424 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1174 atgcagatctttgtgaagaccct 1196 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 946 atgcagatctttgtgaagaccct 968 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 718 atgcagatctttgtgaagaccct 740 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 490 atgcagatctttgtgaagaccct 512 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 262 atgcagatctttgtgaagaccct 284
>dbj|AK004727.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200012H04 product:UBIQUITIN C (TI-225) (UBIQUITIN C) (POLYUBIQUITIN) homolog [Mus musculus], full insert sequence Length = 634 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 402 atgcagatctttgtgaagaccct 424
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.021 Identities = 26/27 (96%) Strand = Plus / Plus Query: 80 cgagatgcagatctttgtgaagaccct 106 ||||||||||||||| ||||||||||| Sbjct: 25760874 cgagatgcagatcttcgtgaagaccct 25760900 Score = 42.1 bits (21), Expect = 0.32 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 agatgcagatctttgtgaagaccct 106 ||||||||||||| ||||||||||| Sbjct: 12629180 agatgcagatcttcgtgaagaccct 12629156
>gb|AY228476.1| Anas platyrhynchos polyubiquitin gene, partial cds Length = 345 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 109 atgcagatctttgtgaagaccct 131
>ref|XM_579662.1| PREDICTED: Rattus norvegicus similar to polyubiquitin (LOC497709), partial mRNA Length = 160 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 64 atgcagatctttgtgaagaccct 86
>ref|XM_579409.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_017314 (LOC497684), mRNA Length = 2545 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2314 atgcagatctttgtgaagaccct 2336 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2086 atgcagatctttgtgaagaccct 2108 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1858 atgcagatctttgtgaagaccct 1880 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1630 atgcagatctttgtgaagaccct 1652 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1402 atgcagatctttgtgaagaccct 1424 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1174 atgcagatctttgtgaagaccct 1196 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 946 atgcagatctttgtgaagaccct 968 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 718 atgcagatctttgtgaagaccct 740 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 490 atgcagatctttgtgaagaccct 512 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 262 atgcagatctttgtgaagaccct 284
>dbj|AK207006.1| Mus musculus cDNA, clone:Y2G0106K07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054250, based on BLAT search Length = 359 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 199 atgcagatctttgtgaagaccct 221
>dbj|AK182022.1| Mus musculus cDNA, clone:Y0G0120I04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054250, based on BLAT search Length = 119 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 71 atgcagatctttgtgaagaccct 93
>dbj|AK181679.1| Mus musculus cDNA, clone:Y0G0119A17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054250, based on BLAT search Length = 232 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 70 atgcagatctttgtgaagaccct 92
>dbj|AK177176.1| Mus musculus cDNA, clone:Y0G0101N24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054250, based on BLAT search Length = 454 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 70 atgcagatctttgtgaagaccct 92 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagac 103 ||||||||||||||||||||| Sbjct: 297 gatgcagatctttgtgaagac 317
>dbj|AK176953.1| Mus musculus cDNA, clone:Y0G0101B17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054250, based on BLAT search Length = 227 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 70 atgcagatctttgtgaagaccct 92
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 46.1 bits (23), Expect = 0.021 Identities = 26/27 (96%) Strand = Plus / Plus Query: 80 cgagatgcagatctttgtgaagaccct 106 ||||||||||||||| ||||||||||| Sbjct: 798 cgagatgcagatcttcgtgaagaccct 824
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 46.1 bits (23), Expect = 0.021 Identities = 26/27 (96%) Strand = Plus / Plus Query: 80 cgagatgcagatctttgtgaagaccct 106 ||||||||||||||| ||||||||||| Sbjct: 63338 cgagatgcagatcttcgtgaagaccct 63364
>emb|X02650.1|GGUBIQ Chicken mRNA for ubiquitin Length = 598 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 241 atgcagatctttgtgaagaccct 263
>gb|BC089218.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone IMAGE:7312282), partial cds Length = 2083 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1820 atgcagatctttgtgaagaccct 1842 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1592 atgcagatctttgtgaagaccct 1614 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1364 atgcagatctttgtgaagaccct 1386 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1136 atgcagatctttgtgaagaccct 1158 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 908 atgcagatctttgtgaagaccct 930 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 680 atgcagatctttgtgaagaccct 702 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 452 atgcagatctttgtgaagaccct 474 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 224 atgcagatctttgtgaagaccct 246
>gb|AF081142.1|AF081142 Cricetulus sp. ubiquitin/ribosomal protein CEP52 fusion protein mRNA, complete cds Length = 496 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 39 atgcagatctttgtgaagaccct 61
>dbj|D17296.1|RATPILP Rattus norvegicus mRNA for polyubiquitin, complete cds, ten completely repetitive ubiquitins in tandem and one ubiguitin-like protein Length = 2545 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2314 atgcagatctttgtgaagaccct 2336 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 2086 atgcagatctttgtgaagaccct 2108 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1858 atgcagatctttgtgaagaccct 1880 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1630 atgcagatctttgtgaagaccct 1652 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1402 atgcagatctttgtgaagaccct 1424 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1174 atgcagatctttgtgaagaccct 1196 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 946 atgcagatctttgtgaagaccct 968 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 718 atgcagatctttgtgaagaccct 740 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 490 atgcagatctttgtgaagaccct 512 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 262 atgcagatctttgtgaagaccct 284
>gb|BC103477.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone MGC:124622 IMAGE:7929586), complete cds Length = 1501 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1199 atgcagatctttgtgaagaccct 1221 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 971 atgcagatctttgtgaagaccct 993 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 743 atgcagatctttgtgaagaccct 765 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 515 atgcagatctttgtgaagaccct 537 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 287 atgcagatctttgtgaagaccct 309
>gb|M11691.1|SYNMUSUBGA Synthetic beta-galactosidase/mouse ubiquitin fusion protein mRNA, clone arf3 Length = 347 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 253 atgcagatctttgtgaagaccct 275 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 25 atgcagatctttgtgaagaccct 47
>gb|M11100.1|CHKUBHSP Chicken ubiquitin mRNA, from heat shocked embryo cells Length = 622 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 241 atgcagatctttgtgaagaccct 263
>gb|M14693.1|CHKUB1A Chicken ubiquitin I (UbI) gene, partial cds Length = 2207 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1789 atgcagatctttgtgaagaccct 1811 Score = 42.1 bits (21), Expect = 0.32 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagacc 104 ||||||||||||||||||||| Sbjct: 1333 atgcagatctttgtgaagacc 1353 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||| ||||||||||| Sbjct: 1105 atgcagatcttcgtgaagaccct 1127
>gb|M57895.1|LINUBQ Linum usitatissimum ubiquitin gene, partial cds Length = 916 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 809 atgcagatctttgtgaagaccct 831
>gb|M22428.1|DROUBIA D.melanogaster ubiquitin protein gene, complete cds Length = 2620 Score = 46.1 bits (23), Expect = 0.021 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccct 106 ||||||||||||||||||||||| Sbjct: 1940 atgcagatctttgtgaagaccct 1962 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagac 103 |||||||||||||||||||| Sbjct: 1712 atgcagatctttgtgaagac 1731
>dbj|D83208.1|GPIUBIY Cavia cobaya mRNA for ubiquitin, complete cds Length = 1028 Score = 46.1 bits (23), Expect = 0.021 Identities = 26/27 (96%) Strand = Plus / Plus Query: 83 gatgcagatctttgtgaagaccctcac 109 |||||||||||| |||||||||||||| Sbjct: 730 gatgcagatcttcgtgaagaccctcac 756 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 503 atgcagatcttcgtgaagaccctcac 528 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 ||||||||||| |||||||||||||| Sbjct: 275 atgcagatcttcgtgaagaccctcac 300
>ref|NM_105209.1| Arabidopsis thaliana UBQ13 AT1G65350 (UBQ13) mRNA, complete cds Length = 885 Score = 44.1 bits (22), Expect = 0.082 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcac 109 |||||||| ||||||||||||||||| Sbjct: 229 atgcagatatttgtgaagaccctcac 254
>ref|NM_178970.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.4 mRNA, complete cds Length = 1624 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 49 agatgcagatctttgttaagactctcaccg 78 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 963 atgcagatcttcgtgaagactctcaccg 990 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 735 atgcagatcttcgtgaagactctcaccg 762
>ref|NM_202787.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.5 mRNA, complete cds Length = 1203 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 84 agatgcagatctttgttaagactctcaccg 113 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 542 atgcagatcttcgtgaagactctcaccg 569
>ref|NM_178969.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.3 mRNA, complete cds Length = 1431 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 84 agatgcagatctttgttaagactctcaccg 113 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 770 atgcagatcttcgtgaagactctcaccg 797 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 542 atgcagatcttcgtgaagactctcaccg 569
>ref|NM_116771.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.1 mRNA, complete cds Length = 1431 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 84 agatgcagatctttgttaagactctcaccg 113 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 770 atgcagatcttcgtgaagactctcaccg 797
>ref|NM_178968.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.2 mRNA, complete cds Length = 1834 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 84 agatgcagatctttgttaagactctcaccg 113 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 998 atgcagatcttcgtgaagactctcaccg 1025 Score = 40.1 bits (20), Expect = 1.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 atgcagatctttgtgaagaccctcaccg 111 ||||||||||| |||||||| ||||||| Sbjct: 770 atgcagatcttcgtgaagactctcaccg 797
>ref|NM_178961.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.3 mRNA, complete cds Length = 1499 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 363 agatgcagatctttgttaagactctcaccg 392
>ref|NM_116523.2| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.1 mRNA, complete cds Length = 1202 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 66 agatgcagatctttgttaagactctcaccg 95
>ref|NM_178960.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.2 mRNA, complete cds Length = 975 Score = 44.1 bits (22), Expect = 0.082 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agatgcagatctttgtgaagaccctcaccg 111 |||||||||||||||| ||||| ||||||| Sbjct: 67 agatgcagatctttgttaagactctcaccg 96 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,146,113 Number of Sequences: 3902068 Number of extensions: 1146113 Number of successful extensions: 79003 Number of sequences better than 10.0: 743 Number of HSP's better than 10.0 without gapping: 746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76282 Number of HSP's gapped (non-prelim): 2721 length of query: 111 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 90 effective length of database: 17,151,101,840 effective search space: 1543599165600 effective search space used: 1543599165600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)