ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart10a07 |
|---|---|
| Clone Library Name | barley_pub |
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 261 bits (666), Expect = 1e-69 Identities = 127/162 (78%), Positives = 143/162 (88%), Gaps = 4/162 (2%) Frame = +2 Query: 65 PNNSGSSDSA----EPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRI 232 P NSG + +A + KLSPSGL +RE+PGGYGVPFFSPLRDRLDY+YFQGAEEYFRSR+ Sbjct: 5 PVNSGDAAAAATGEKSKLSPSGLPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRV 64 Query: 233 ARNGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLF 412 AR+GGATVLRVNMPPGPFI+ N RVVA LDARSF VLLDD+ VDK DTLDGT+MPS LF Sbjct: 65 ARHGGATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALF 124 Query: 413 GGYRPLAFMDAADPRHAALKRVMISLAAARMHHVAPAFRTAF 538 GG+RPLAF+DAADPRHA +KRV++SLAAARMHHVAPAFR AF Sbjct: 125 GGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAF 166
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 255 bits (652), Expect = 5e-68 Identities = 123/160 (76%), Positives = 140/160 (87%), Gaps = 3/160 (1%) Frame = +2 Query: 68 NNSGSSDSA---EPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIAR 238 N+ +D A + KLSPSGL +RE+PGGYGVPF SPLRDRLDYYYFQGA+E+FRSR+AR Sbjct: 7 NSGDGNDGAVGGQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVAR 66 Query: 239 NGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGG 418 +GGATVLRVNMPPGPF+ + RVVA LDARSF VLLDD+ VDK DTLDGTFMPSL LFGG Sbjct: 67 HGGATVLRVNMPPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGG 126 Query: 419 YRPLAFMDAADPRHAALKRVMISLAAARMHHVAPAFRTAF 538 +RPLAF+DAADPRHA +KRV++SLAAARMHHVAPAFR AF Sbjct: 127 HRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAF 166
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 156 bits (395), Expect = 3e-38 Identities = 75/138 (54%), Positives = 98/138 (71%) Frame = +2 Query: 128 REVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGATVLRVNMPPGPFITANSRV 307 R VPG YGVPF S +RDRLD+YY QG ++YF SR R G +TV+R+N+PPGPF+ + RV Sbjct: 10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYG-STVVRINVPPGPFMARDPRV 68 Query: 308 VAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMIS 487 VA LDA+SF VL D A V+K D GTFMPS L GGYR A++D ++P HA +K++++S Sbjct: 69 VALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLS 128 Query: 488 LAAARMHHVAPAFRTAFG 541 L +R P FR+ FG Sbjct: 129 LLVSRKDAFVPVFRSNFG 146
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 150 bits (378), Expect = 3e-36 Identities = 72/160 (45%), Positives = 105/160 (65%) Frame = +2 Query: 59 KVPNNSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIAR 238 K+P G + P + L +R++PG YG+P P++DRLDY+Y QG EE+F+SR+ + Sbjct: 53 KIP---GITSQPPPSSDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQK 109 Query: 239 NGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGG 418 +TV R NMPPGPFI +N RV+ LDA+SF VL D + V+K D GT+MPS L GG Sbjct: 110 YK-STVYRANMPPGPFIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGG 168 Query: 419 YRPLAFMDAADPRHAALKRVMISLAAARMHHVAPAFRTAF 538 YR L+++D ++P H LK+++ +L R +V P F ++F Sbjct: 169 YRILSYLDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSF 208
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 147 bits (370), Expect = 2e-35 Identities = 67/146 (45%), Positives = 99/146 (67%), Gaps = 1/146 (0%) Frame = +2 Query: 104 LSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGA-EEYFRSRIARNGGATVLRVNMPPG 280 + PS +RE+PG YG+PFF P++DRL+Y+Y G +EYFRSR+ + +TV R NMPPG Sbjct: 1 MDPSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKY-QSTVFRANMPPG 59 Query: 281 PFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRH 460 PF+++N +V+ LDA+SF +L D + V+K D GT+MPS L G YR L+++D ++PRH Sbjct: 60 PFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRVLSYLDPSEPRH 119 Query: 461 AALKRVMISLAAARMHHVAPAFRTAF 538 A LK ++ + + V P F T + Sbjct: 120 AQLKNLLFFMLKNSSNRVIPQFETTY 145
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 141 bits (356), Expect = 1e-33 Identities = 67/140 (47%), Positives = 93/140 (66%) Frame = +2 Query: 119 LSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGATVLRVNMPPGPFITAN 298 L +R +PG YG+P P++DR DY+Y QGAEE+F+SRI R +TV RVNMPPG FI N Sbjct: 52 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRI-RKYNSTVYRVNMPPGAFIAEN 110 Query: 299 SRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRV 478 +VVA LD +SF VL D V+K D GT+MPS L GGYR L+++D ++P+H LK + Sbjct: 111 PQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNL 170 Query: 479 MISLAAARMHHVAPAFRTAF 538 + L + + + P F+ + Sbjct: 171 LFFLLKSSRNRIFPEFQATY 190
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 140 bits (352), Expect = 3e-33 Identities = 72/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%) Frame = +2 Query: 74 SGSSDSAEPKLSPSG-LSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGA 250 S S+ + +SP L +R+VPG YG P +RDR +Y+Y G + F + R + Sbjct: 29 SASATDRQEVVSPKRRLPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRS 88 Query: 251 TVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYRPL 430 TV+R+NMPPGPF+ + RVVA LDA SF VL D + VDKTD GTFMPS L GGYR L Sbjct: 89 TVVRLNMPPGPFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVL 148 Query: 431 AFMDAADPRHAALKRVMISLAAARMHHVAPAFRTAFG 541 +++D ++P HA LK ++ L + R V P FR +G Sbjct: 149 SYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYG 185
>YL18_CAEEL (Q11103) Hypothetical protein C02F12.8| Length = 687 Score = 33.9 bits (76), Expect = 0.30 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 2/117 (1%) Frame = +2 Query: 44 PAMTSKVPNNSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQG--AEEY 217 PA + +P + +SP + + P GYG F SP+ Y + G A E Sbjct: 188 PAPPTMMPVGAVMVSQGSYSMSPPQIDTSKPPSGYG--FSSPIFPSPSYSQYSGPPANEG 245 Query: 218 FRSRIARNGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGT 388 F I N G RV P ++ + + ++SFS D + ++G+ Sbjct: 246 FPDIIYDNNGVAYCRVVSAPVCVVSMSQSGSSVCSSQSFSSGQSDISMSSRPPINGS 302
>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 265 Score = 31.6 bits (70), Expect = 1.5 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = +2 Query: 14 AFGVRLALAHPAMTSKVPNNSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYY 193 A +A PA+ ++V S S P P+ ++V GG S L D Y Sbjct: 44 AMKASIAAGEPAVIAEVKKASPSKGVIRPDFHPADIAVSYEFGGA-----SCLSVLTDMY 98 Query: 194 YFQGAEEYFRSRIARNG-GATVLRVNMPPGPFITANSRVV 310 +FQG++ Y + AR VLR + P+ +RV+ Sbjct: 99 FFQGSDAYLQQ--AREACTLPVLRKDFTVDPYQVYEARVL 136
>BBP1_YEAST (Q12365) Protein BBP1| Length = 385 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/60 (31%), Positives = 32/60 (53%) Frame = +2 Query: 50 MTSKVPNNSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSR 229 + SK+ N G + E + SP LSV+++PG + P RD +D YY + + ++R Sbjct: 163 LLSKLFNKDGVN---EVRRSPYKLSVKDIPGKFPSPLTK--RDEIDNYYVRDEDACHKNR 217
>RRMJ_ARCFU (O28228) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 191 Score = 31.2 bits (69), Expect = 2.0 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 12/69 (17%) Frame = +2 Query: 170 LRDRLDYYYFQGAEEYFRSRIAR------------NGGATVLRVNMPPGPFITANSRVVA 313 ++DR DYYY++ +E +RSR A G VL + PG + S+V A Sbjct: 1 MKDRQDYYYWKAKKEGYRSRAAYKLLQMNRTFKLIREGDLVLDLGATPGGW----SQVAA 56 Query: 314 FLDARSFSV 340 L AR +V Sbjct: 57 LLGARVVAV 65
>MTA2_MOUSE (Q9R190) Metastasis-associated protein MTA2 (Metastasis-associated| 1-like 1) Length = 668 Score = 31.2 bits (69), Expect = 2.0 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = -2 Query: 104 AWAP---HCRCCRSCWVPWTSWQG 42 AW P CR C SCW+ W + G Sbjct: 380 AWGPPNMQCRLCASCWIYWKKYGG 403
>MTA2_HUMAN (O94776) Metastasis-associated protein MTA2 (Metastasis-associated| 1-like 1) (MTA1-L1 protein) (p53 target protein in deacetylase complex) Length = 668 Score = 31.2 bits (69), Expect = 2.0 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = -2 Query: 104 AWAP---HCRCCRSCWVPWTSWQG 42 AW P CR C SCW+ W + G Sbjct: 380 AWGPPNMQCRLCASCWIYWKKYGG 403
>DLGP4_HUMAN (Q9Y2H0) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 989 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +2 Query: 362 DKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMISLAAARMH 508 + +D+LD + P V GG P P+HAALK +L ++ H Sbjct: 607 NSSDSLDSSTRPPSVTRGGVAPAPEAPEPPPKHAALKSEQGTLTSSESH 655
>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 272 Score = 30.8 bits (68), Expect = 2.6 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +2 Query: 173 RDRLDYYYFQGAEEYFRSR 229 RDR DYYY Q EE +RSR Sbjct: 3 RDRRDYYYHQAKEEGYRSR 21
>S29A2_HUMAN (Q14542) Equilibrative nucleoside transporter 2 (Equilibrative| nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter) (Equilibrative NBMPR-insensitive nucleoside transporter) (Nucleoside transporter, ei-type) (Solute carrier f Length = 456 Score = 30.8 bits (68), Expect = 2.6 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +2 Query: 248 ATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTF 391 A +++V+M PGPF + V F++ SFS +L + + T+ T+ Sbjct: 114 AALVKVDMSPGPFFSITMASVCFIN--SFSAVLQGSLFGQLGTMPSTY 159
>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 268 Score = 30.8 bits (68), Expect = 2.6 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +2 Query: 173 RDRLDYYYFQGAEEYFRSR 229 RDR DYYY Q EE +RSR Sbjct: 3 RDRRDYYYHQAKEEGYRSR 21
>PFA4_CRYNE (Q5KLN1) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 456 Score = 29.6 bits (65), Expect = 5.7 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -2 Query: 98 APHCRCCRSCWVPWTSWQG 42 A HCR C++CWV W G Sbjct: 108 AHHCRQCKTCWVNHCPWIG 126
>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 992 Score = 29.6 bits (65), Expect = 5.7 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +2 Query: 362 DKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMISLAAARMHHVA 517 + +D+LD + P V GG P P+HAALK +L ++ H A Sbjct: 607 NSSDSLDSSTRPPSVTRGGITPGPEAPEPPPKHAALKSEHGTLTSSESHSEA 658
>Y1016_HAEIN (P44095) Hypothetical protein HI1016| Length = 142 Score = 29.6 bits (65), Expect = 5.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 56 SKVPNNSGSSDSAEPKLSPSGLSVREVPGGY 148 SK+PN+ G+ A GLS+ E+P GY Sbjct: 18 SKIPNHCGTHMDASRHFVKDGLSINELPIGY 48
>OXAA_NITEU (P59810) Inner membrane protein oxaA| Length = 614 Score = 29.3 bits (64), Expect = 7.5 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 53 TSKVPNNSGSSDSAEPKLSPSGLSVREV 136 T+ +P + G+ DS P+L PSG +R V Sbjct: 70 TNGIPASGGNGDSVTPRLLPSGEQIRVV 97
>TRUB_PYRFU (Q7LWY0) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 340 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = +2 Query: 170 LRDRLDYYYF---QGAEEYFRSRI 232 L D +DYYYF G EEYFR I Sbjct: 217 LHDLVDYYYFWKEDGIEEYFRKAI 240
>PROP_CAVPO (Q64181) Properdin precursor (Factor P)| Length = 470 Score = 29.3 bits (64), Expect = 7.5 Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%) Frame = -2 Query: 92 HCRCCRSC-WVPWTSW 48 HC+ CRS W PW+SW Sbjct: 70 HCQACRSPRWSPWSSW 85
>MTA1_RAT (Q62599) Metastasis-associated protein MTA1| Length = 703 Score = 28.9 bits (63), Expect = 9.7 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -2 Query: 104 AWAP---HCRCCRSCWVPWTSWQG 42 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429
>MTA1_MOUSE (Q8K4B0) Metastasis-associated protein MTA1| Length = 715 Score = 28.9 bits (63), Expect = 9.7 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -2 Query: 104 AWAP---HCRCCRSCWVPWTSWQG 42 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429
>MTA1_HUMAN (Q13330) Metastasis-associated protein MTA1| Length = 715 Score = 28.9 bits (63), Expect = 9.7 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -2 Query: 104 AWAP---HCRCCRSCWVPWTSWQG 42 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,555,179 Number of Sequences: 219361 Number of extensions: 631469 Number of successful extensions: 2336 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2278 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2325 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
