ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart09h11 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 108 bits (270), Expect = 5e-24 Identities = 54/104 (51%), Positives = 71/104 (68%) Frame = +2 Query: 110 KGPVPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKS 289 KGP + GKKARD+LY+DY D KF+ +T S G+++TA+G+K ELF+ D+ Q K+ Sbjct: 2 KGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKN 61 Query: 290 GRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQKSGKL 421 T DV +D +S V T +T DE PGLKT F F VPDQKSGK+ Sbjct: 62 KNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKV 105
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 106 bits (264), Expect = 3e-23 Identities = 51/104 (49%), Positives = 69/104 (66%) Frame = +2 Query: 110 KGPVPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKS 289 KGP + GKKARD+LYKDY D KFS +T S G+ +T++G K +LF+ D+ Q K+ Sbjct: 2 KGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKN 61 Query: 290 GRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQKSGKL 421 T D+ +D +S + T +T DE PGLKT F+VPDQ+SGKL Sbjct: 62 KNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKL 105
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 103 bits (258), Expect = 1e-22 Identities = 49/104 (47%), Positives = 71/104 (68%) Frame = +2 Query: 110 KGPVPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKS 289 KGP + GKKARD+LYKDY+ D+KF+ ST S G+++T++G K ELF+GD+ Q K+ Sbjct: 2 KGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKN 61 Query: 290 GRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQKSGKL 421 T D+ +D +S + T +T +E PG+K FKVP+Q SGK+ Sbjct: 62 KNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKV 105
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 100 bits (250), Expect = 1e-21 Identities = 50/103 (48%), Positives = 64/103 (62%) Frame = +2 Query: 110 KGPVPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKS 289 KGP + GKKARD+LY+DY DQKFS +T S G+++T G LF+GD+ Q K+ Sbjct: 2 KGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKN 61 Query: 290 GRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQKSGK 418 T DV + DS + T +TFDE PGLK K+PD KSGK Sbjct: 62 NNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGK 104
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 100 bits (248), Expect = 2e-21 Identities = 49/104 (47%), Positives = 66/104 (63%) Frame = +2 Query: 110 KGPVPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKS 289 KGP + GKKARD+LYKD+N DQKFS +T S G+++T+ G K +L +GD+ Q + Sbjct: 2 KGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRR 61 Query: 290 GRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQKSGKL 421 T D+ + DS T DE PGL++ F FKVPDQ SGK+ Sbjct: 62 KNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKV 105
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 100 bits (248), Expect = 2e-21 Identities = 50/102 (49%), Positives = 67/102 (65%) Frame = +2 Query: 113 GPVPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKSG 292 GP +P GKKARD+LY+DY D KF+ +T + G+++TA K +L G+I+ Q K+ Sbjct: 2 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 61 Query: 293 RNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQKSGK 418 TVDV + DS V T VT DE+ PGLK+ F VPDQ+SGK Sbjct: 62 NITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGK 103
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 90.1 bits (222), Expect = 2e-18 Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%) Frame = +2 Query: 137 GKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKSGRNTVDVTI 316 GKK RD+LYKDYN QKF +T+S G+++TAAG + +E G++ Q K+ + TVDV Sbjct: 12 GKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKA 71 Query: 317 DCDSKVSTAVTFDEV-VPGLKTSFGFKVPDQKSGKL 421 + +S + T +T DE PGLK+ VPDQ+SGKL Sbjct: 72 NSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKL 107
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 87.4 bits (215), Expect = 1e-17 Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 113 GPVPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKSG 292 GP + GKKA+D+LY+DY D KF+ +T + G ++TA K +L +G+I+ Q K+ Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNK 62 Query: 293 RNTVDVTIDCDSKVSTAVTFDEV-VPGLKTSFGFKVPDQKSGKL 421 TVDV + S V T +T D++ PGLKT F VPDQKSGK+ Sbjct: 63 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKV 106
>VDAC1_RABIT (Q9TT15) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 33.5 bits (75), Expect = 0.21 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFDQ-KFSWSTTSEFGLSVTAAGVKFDEL--FIGDIRVQHK 286 P + GK ARD+ K Y F K T SE GL T++G E G + +++ Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSF 385 + T + D+ + T +T D++ GLK +F Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTF 98
>VDAC1_PIG (Q9MZ16) Voltage-dependent anion-selective channel protein 1| (VDAC-1) Length = 282 Score = 33.5 bits (75), Expect = 0.21 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFDQ-KFSWSTTSEFGLSVTAAGVKFDEL--FIGDIRVQHK 286 P + GK ARD+ K Y F K T SE GL T++G E G + +++ Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSF 385 + T + D+ + T +T D++ GLK +F Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTF 98
>VDAC1_HUMAN (P21796) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM) Length = 282 Score = 33.5 bits (75), Expect = 0.21 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFDQ-KFSWSTTSEFGLSVTAAGVKFDEL--FIGDIRVQHK 286 P + GK ARD+ K Y F K T SE GL T++G E G + +++ Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSF 385 + T + D+ + T +T D++ GLK +F Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTF 98
>VDAC1_BOVIN (P45879) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Plasmalemmal porin) (Brain-derived voltage-dependent anion channel 1) (BR1-VDAC) Length = 282 Score = 33.5 bits (75), Expect = 0.21 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFDQ-KFSWSTTSEFGLSVTAAGVKFDEL--FIGDIRVQHK 286 P + GK ARD+ K Y F K T SE GL T++G E G + +++ Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSF 385 + T + D+ + T +T D++ GLK +F Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTF 98
>VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin) Length = 282 Score = 33.1 bits (74), Expect = 0.27 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFD-QKFSWSTTSEFGLSVTAAGVKFDE--LFIGDIRVQHK 286 P + GK ARDI K Y F K T S G+ T +G + G + ++K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYK 62 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSFGFKV---PDQKSGKL 421 G + T + D+ + T + D++ GLK +F +KSGK+ Sbjct: 63 WGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKV 113
>VDAC1_MOUSE (Q60932) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) Length = 296 Score = 32.7 bits (73), Expect = 0.36 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFDQ-KFSWSTTSEFGLSVTAAGVKFDEL--FIGDIRVQHK 286 P + GK ARD+ K Y F K T SE GL T++G E G + +++ Sbjct: 17 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYR 76 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSF 385 + T + D+ + T +T D++ GLK +F Sbjct: 77 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTF 112
>VDAC1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (rVDAC1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 32.7 bits (73), Expect = 0.36 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFDQ-KFSWSTTSEFGLSVTAAGVKFDEL--FIGDIRVQHK 286 P + GK ARD+ K Y F K T SE GL T++G E G + +++ Sbjct: 3 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYR 62 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSF 385 + T + D+ + T +T D++ GLK +F Sbjct: 63 WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTF 98
>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)| Length = 281 Score = 32.0 bits (71), Expect = 0.61 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFD-QKFSWSTTSEFGLSVTAAGVKFDE--LFIGDIRVQHK 286 P + GK+ARDI K YNF K T + G+ AG E G + ++K Sbjct: 2 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYK 61 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSFGFKVPDQKSGK 418 + +T + D+ + T V D+++ GLK S Q K Sbjct: 62 VKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNK 108
>NADE_MYCTU (P0A5L6) Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+)| synthase [glutamine-hydrolyzing]) Length = 679 Score = 31.6 bits (70), Expect = 0.80 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +2 Query: 230 AAGVKFDELFIGDIRVQHKSGRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQK 409 A GV F E+ IGD + +T+ KV VTF+ V GL+T + F++ +Q+ Sbjct: 418 ALGVTFSEIDIGDTA---RLMLHTIGHPYSVGEKVYD-VTFENVQAGLRTDYLFRIANQR 473 Query: 410 SG 415 G Sbjct: 474 GG 475
>NADE_MYCBO (P0A5L7) Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+)| synthase [glutamine-hydrolyzing]) Length = 679 Score = 31.6 bits (70), Expect = 0.80 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +2 Query: 230 AAGVKFDELFIGDIRVQHKSGRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKVPDQK 409 A GV F E+ IGD + +T+ KV VTF+ V GL+T + F++ +Q+ Sbjct: 418 ALGVTFSEIDIGDTA---RLMLHTIGHPYSVGEKVYD-VTFENVQAGLRTDYLFRIANQR 473 Query: 410 SG 415 G Sbjct: 474 GG 475
>VL2_HPV39 (P24839) Minor capsid protein L2| Length = 470 Score = 31.2 bits (69), Expect = 1.0 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = -2 Query: 390 KPKEVFKPGTTSSKVTAVDTLESQSIVTSTVFLPLLCCTRMSPMKSSSNFTPAAVTLNPN 211 +P V +P S+ + V +E S++TS +P T + SSS TPA + + P+ Sbjct: 88 RPPVVIEP-VGPSEPSIVQLVEDSSVITSGTPVPTFTGTSGFEITSSSTTTPAVLDITPS 146 Query: 210 S 208 S Sbjct: 147 S 147
>VDAC2_MELGA (P82013) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (Outer mitochondrial membrane protein porin 2) Length = 282 Score = 30.8 bits (68), Expect = 1.4 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 9/111 (8%) Frame = +2 Query: 116 PVPFPIFGKKARDILYKDYNFD-QKFSWSTTSEFGLSVTAAGVKFDEL--FIGDIRVQHK 286 P + GK ARDI K Y F K T S G+ T +G + G + ++K Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKYK 62 Query: 287 SGRNTVDVT--IDCDSKVSTAVTF-DEVVPGLKTSFGFKV---PDQKSGKL 421 + T + D+ + T + D++ GLK +F +KSGK+ Sbjct: 63 WAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKI 113
>VL2_HPVME (P27965) Minor capsid protein L2| Length = 469 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -2 Query: 390 KPKEVFKP-GTTSSKVTAVDTLESQSIVTSTVFLPLLCCTRMSPMKSSSNFTPAAVTLNP 214 +P V +P G T + V +E S++TS +P T + SSS TPA + + P Sbjct: 88 RPPVVIEPVGPTEPSI--VQLVEDSSVITSGTPVPTFTGTSGFEITSSSTTTPAVLDITP 145 Query: 213 NS 208 +S Sbjct: 146 SS 147
>Y1373_BACHD (Q9KD46) UPF0085 protein BH1373| Length = 270 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 218 LSVTAAGVKFDELFIGDIRVQHKSGRNTVDVTIDCDSKVSTAVTFDEVVPGLKTSFGFKV 397 L V AA +F I R+ + + TVD I + + F VVPG++T K Sbjct: 23 LVVKAAASQFSGAGIEVRRIPYVEDKETVDEVIQLAKQADAIIAFTLVVPGIRTYLLEKA 82 Query: 398 PDQK 409 + K Sbjct: 83 TEAK 86
>BAIF_EUBSP (P19413) Bile-acid-CoA hydrolase (EC 3.1.2.26) (Bile acid-coenzyme| A hydrolase) (Bile acid-inducible operon protein F) Length = 425 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2 Query: 128 PIFGKKARDIL----YKDYNFDQKFSWSTTSEFGLSVTAAGVKFDEL 256 P+FG RDIL Y D D+ + +EF L T + DE+ Sbjct: 370 PLFGMDNRDILKDLGYDDAKIDELYEQGIVNEFDLDTTIKRYRLDEV 416
>SYA_DEHE1 (Q3ZAE4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 871 Score = 29.6 bits (65), Expect = 3.0 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Frame = +2 Query: 158 LYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKSGRNTVDVTIDCDSKVS 337 LY Y F + + +E GLSV G F ++ VQ R++ + D + Sbjct: 388 LYDTYGFPVEMTTEIAAERGLSVDLGG------FEAEMEVQRTKARSSRKFSFDA---AA 438 Query: 338 TAVTFDEVVPGLKTSF-GFKVPDQKS 412 TA + G KT F G+++ QKS Sbjct: 439 TAEAVKNMRHGEKTCFVGYELTRQKS 464
>C71B6_ARATH (O65787) Cytochrome P450 71B6 (EC 1.14.-.-)| Length = 503 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -1 Query: 331 FGVAIYCDINSISTTFMLYPYVTDEEFIKLHASSCDTQPKFA 206 +G I + S+ T + P T EE +KLH S C T+PK + Sbjct: 67 YGPVITVYLGSVRTVVVHSPE-TAEEVLKLHDSECCTRPKLS 107
>IF2G_THEAC (Q9HLA7) Translation initiation factor 2 gamma subunit| (eIF-2-gamma) (aIF2-gamma) Length = 411 Score = 29.3 bits (64), Expect = 3.9 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Frame = +2 Query: 119 VPFPIFGKKARDILYKDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGD-----IRVQH 283 +P P F + I+Y +FD + SE V + E +GD +Q Sbjct: 197 IPSPKFNENDDPIMYIARSFDINRPGTPVSELKGGVIGGSLTQGEFALGDEIEIVPGIQT 256 Query: 284 KSGRNTV--DVTIDCDSKVSTAVTFDEVVPGLKTSFGFKV 397 G TV +VT + S ++ ++D + PG + G K+ Sbjct: 257 TKGNKTVWNNVTTEVVSLMAGKYSYDRIRPGGLAAIGTKL 296
>VL2_HPV18 (P06793) Minor capsid protein L2| Length = 462 Score = 29.3 bits (64), Expect = 3.9 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -2 Query: 399 GTLKPKEVFKP-GTTSSKVTAVDTLESQSIVTSTVFLPLLCCTRMSPMKSSSNFTPAAVT 223 G +P V +P G T + V +E S+VTS P T + S+ TPA + Sbjct: 85 GPTRPPVVIEPVGPTDPSI--VTLIEDSSVVTSGAPRPTFTGTSGFDITSAGTTTPAVLD 142 Query: 222 LNPNSLVV 199 + P+S V Sbjct: 143 ITPSSTSV 150
>RNH2_BACHD (Q9Z9S0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 263 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 10/82 (12%) Frame = -2 Query: 402 SGTLKPKEVFKPGTTSSKVTAVDTLES-------QSIVTSTVFLPLLCCTRMSPMKSSSN 244 + + PK+V PG T SK A +T ES ++ S +P+ ++ +++ Sbjct: 94 AAVILPKDVQLPGLTDSKKLAKETRESFYDRIKEVALAWSVAIVPVTVIDEVNIYQATKQ 153 Query: 243 FTPAAV---TLNPNSLVVDHEN 187 +A+ ++NP++L++D N Sbjct: 154 GMMSAIDQLSVNPDALLLDAMN 175
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/54 (38%), Positives = 23/54 (42%) Frame = -2 Query: 369 PGTTSSKVTAVDTLESQSIVTSTVFLPLLCCTRMSPMKSSSNFTPAAVTLNPNS 208 P TTSS + T S S TST T S SSSN TP + T S Sbjct: 243 PTTTSSAPISTSTTSSTSTSTSTT-----SPTSSSAPTSSSNTTPTSTTFTTTS 291
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.5 bits (62), Expect = 6.7 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 1 TPSPSPFIAPRPQPPSTP 54 TP+PSP ++P P P TP Sbjct: 80 TPTPSPTLSPTPSPTPTP 97
>Y107_MYCPN (P75562) Hypothetical protein MPN107 (C09_orf251)| Length = 251 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = -2 Query: 273 RMSPMKSSSNFTPAAVT--LNPNSLVVDHENFWSKL*SLYKISLAFFPKIG 127 R+ +K S +F A+T S+ +D E W + +LY I LAF K G Sbjct: 92 RLKNIKKSDSFLKEALTGLSTIYSVEIDEELVWLQRNNLYSIFLAFLKKHG 142
>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)| Length = 1075 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = -2 Query: 396 TLKPKEVFKPGTTSSKVTAVDTLESQSIVTSTVFLPLLCCTRMSPMKSSSNFT 238 TL+ F P T S + T++ +I++ + CC + P +S+NFT Sbjct: 137 TLEMTGYFLPPQTGSYTFSFATVDDSAILSVGGSIAFECCAQEQPPITSTNFT 189
>YMJB_CAEEL (P34487) Hypothetical protein F59B2.12| Length = 918 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/48 (27%), Positives = 26/48 (54%) Frame = +2 Query: 164 KDYNFDQKFSWSTTSEFGLSVTAAGVKFDELFIGDIRVQHKSGRNTVD 307 K+++ D + T EFG S +A +K + + + V++ + RNT + Sbjct: 463 KNHSIDGSYRNKKTGEFGNSEMSASIKNADGTMSQVNVKNDTNRNTYE 510 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,273,120 Number of Sequences: 219361 Number of extensions: 983796 Number of successful extensions: 4576 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4501 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
