ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100231.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
2dbj|AK073584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
3dbj|AK060148.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
4gb|AY105773.1| Zea mays PCO130847 mRNA sequence 170 2e-39
5gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 70 6e-09
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 70 6e-09
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
8gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b0... 64 4e-07
9emb|AL357519.19| Human DNA sequence from clone RP11-367G18 on ch... 44 0.36
10dbj|AK107864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
11gb|AY316741.1| Lotus corniculatus var. japonicus VDAC3.1 mRNA, c... 42 1.4
12emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in ... 42 1.4
13gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 42 1.4
14gb|AC123697.19| Mus musculus chromosome 5, clone RP23-329M7, com... 40 5.6
15ref|XM_466319.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
16gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
17gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.6
18gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
19gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.6
20gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
21emb|AL445225.9| Human DNA sequence from clone RP11-4D11 on chrom... 40 5.6
22gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.6
23emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.6
24emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 5.6
25gb|AC091976.2| Homo sapiens chromosome 5 clone RP11-528F16, comp... 40 5.6
26emb|BX663611.13| Zebrafish DNA sequence from clone DKEY-148N20 i... 40 5.6
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
29emb|BX284689.6| Zebrafish DNA sequence from clone CH211-106B10 i... 40 5.6
30dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
31dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
32dbj|AK099948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
33emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 i... 40 5.6
34emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 i... 40 5.6
35gb|AY112607.1| Zea mays CL50534_1 mRNA sequence 40 5.6
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
37emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chr... 40 5.6 
>dbj|AK100231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049J19, full
           insert sequence
          Length = 1608

 Score =  184 bits (93), Expect = 2e-43
 Identities = 264/321 (82%)
 Strand = Plus / Plus

                                                                       
Query: 100 aaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaagagatatctt 159
           |||||||||||||||||| | ||||||||  | | ||||||||| ||||| |||| | ||
Sbjct: 179 aaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaaaagatctttt 238

                                                                       
Query: 160 gtacaaggactacaattttgaccaaaagttttcatggtcaacaactagcgaatttgggtt 219
           ||||||||||||||||||||||||||||||||| |   | ||||||||| | | ||| ||
Sbjct: 239 gtacaaggactacaattttgaccaaaagttttctttaacgacaactagcaattctggttt 298

                                                                       
Query: 220 gagtgtcacagctgctggcgtgaagtttgatgaactcttcatcggtgacatacgggtaca 279
           | || | |||||  | || |||||| | || |||||||||||||||||||||| |  |||
Sbjct: 299 gggtctaacagccaccggtgtgaagatagacgaactcttcatcggtgacatacagacaca 358

                                                                       
Query: 280 acataaaagtggtagaaatactgttgatgtcacaatagattgcgactccaaagtgtcaac 339
           |||||||||||| | ||  |||||||||||||  || ||| | || || | |||||||||
Sbjct: 359 acataaaagtggcaaaaccactgttgatgtcaagattgatagtgaatctagagtgtcaac 418

                                                                       
Query: 340 cgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttcaaggttcc 399
           | | |||||| |||||||||   |  ||||| |||||||||||||  |||||| ||||||
Sbjct: 419 cacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttcagggttcc 478

                                
Query: 400 tgatcaaaagtcagggaagct 420
           |||||||||||| ||||||||
Sbjct: 479 tgatcaaaagtccgggaagct 499
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>dbj|AK073584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050N14, full
           insert sequence
          Length = 1242

 Score =  184 bits (93), Expect = 2e-43
 Identities = 264/321 (82%)
 Strand = Plus / Plus

                                                                       
Query: 100 aaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaagagatatctt 159
           |||||||||||||||||| | ||||||||  | | ||||||||| ||||| |||| | ||
Sbjct: 130 aaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaaaagatctttt 189

                                                                       
Query: 160 gtacaaggactacaattttgaccaaaagttttcatggtcaacaactagcgaatttgggtt 219
           ||||||||||||||||||||||||||||||||| |   | ||||||||| | | ||| ||
Sbjct: 190 gtacaaggactacaattttgaccaaaagttttctttaacgacaactagcaattctggttt 249

                                                                       
Query: 220 gagtgtcacagctgctggcgtgaagtttgatgaactcttcatcggtgacatacgggtaca 279
           | || | |||||  | || |||||| | || |||||||||||||||||||||| |  |||
Sbjct: 250 gggtctaacagccaccggtgtgaagatagacgaactcttcatcggtgacatacagacaca 309

                                                                       
Query: 280 acataaaagtggtagaaatactgttgatgtcacaatagattgcgactccaaagtgtcaac 339
           |||||||||||| | ||  |||||||||||||  || ||| | || || | |||||||||
Sbjct: 310 acataaaagtggcaaaaccactgttgatgtcaagattgatagtgaatctagagtgtcaac 369

                                                                       
Query: 340 cgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttcaaggttcc 399
           | | |||||| |||||||||   |  ||||| |||||||||||||  |||||| ||||||
Sbjct: 370 cacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttcagggttcc 429

                                
Query: 400 tgatcaaaagtcagggaagct 420
           |||||||||||| ||||||||
Sbjct: 430 tgatcaaaagtccgggaagct 450
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>dbj|AK060148.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C01, full
           insert sequence
          Length = 1188

 Score =  184 bits (93), Expect = 2e-43
 Identities = 264/321 (82%)
 Strand = Plus / Plus

                                                                       
Query: 100 aaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaagagatatctt 159
           |||||||||||||||||| | ||||||||  | | ||||||||| ||||| |||| | ||
Sbjct: 121 aaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaaaagatctttt 180

                                                                       
Query: 160 gtacaaggactacaattttgaccaaaagttttcatggtcaacaactagcgaatttgggtt 219
           ||||||||||||||||||||||||||||||||| |   | ||||||||| | | ||| ||
Sbjct: 181 gtacaaggactacaattttgaccaaaagttttctttaacgacaactagcaattctggttt 240

                                                                       
Query: 220 gagtgtcacagctgctggcgtgaagtttgatgaactcttcatcggtgacatacgggtaca 279
           | || | |||||  | || |||||| | || |||||||||||||||||||||| |  |||
Sbjct: 241 gggtctaacagccaccggtgtgaagatagacgaactcttcatcggtgacatacagacaca 300

                                                                       
Query: 280 acataaaagtggtagaaatactgttgatgtcacaatagattgcgactccaaagtgtcaac 339
           |||||||||||| | ||  |||||||||||||  || ||| | || || | |||||||||
Sbjct: 301 acataaaagtggcaaaaccactgttgatgtcaagattgatagtgaatctagagtgtcaac 360

                                                                       
Query: 340 cgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttcaaggttcc 399
           | | |||||| |||||||||   |  ||||| |||||||||||||  |||||| ||||||
Sbjct: 361 cacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttcagggttcc 420

                                
Query: 400 tgatcaaaagtcagggaagct 420
           |||||||||||| ||||||||
Sbjct: 421 tgatcaaaagtccgggaagct 441
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>gb|AY105773.1| Zea mays PCO130847 mRNA sequence
          Length = 1460

 Score =  170 bits (86), Expect = 2e-39
 Identities = 266/326 (81%)
 Strand = Plus / Plus

                                                                       
Query: 95  ttgggaaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaagagat 154
           ||||||||||||||||||||||| ||||| ||| | | | ||||||||| ||||| ||||
Sbjct: 180 ttgggaaggatgagcaaaggccctgttccattcgccaacattgggaagagagcaaaagat 239

                                                                       
Query: 155 atcttgtacaaggactacaattttgaccaaaagttttcatggtcaacaactagcgaattt 214
            ||||||||||||||||||| ||||||||||||||||| | ||| |||  |    | | |
Sbjct: 240 ctcttgtacaaggactacaactttgaccaaaagttttctttgtcgacatgttctaactct 299

                                                                       
Query: 215 gggttgagtgtcacagctgctggcgtgaagtttgatgaactcttcatcggtgacatacgg 274
           || |||| | |||||||  |||| |||||| |  |||||  |||||| ||||| ||||||
Sbjct: 300 ggtttgaatctcacagccactggtgtgaagatcaatgaagacttcattggtgatatacgg 359

                                                                       
Query: 275 gtacaacataaaagtggtagaaatactgttgatgtcacaatagattgcgactccaaagtg 334
             ||| |||||||| || ||||  ||||||||||||| ||| ||| | || || ||||||
Sbjct: 360 acacagcataaaagcggcagaaccactgttgatgtcataatcgatagtgattctaaagtg 419

                                                                       
Query: 335 tcaaccgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttcaag 394
           |||||| | |||||| ||||||||| | |  |||||||||||||||| || | |||||||
Sbjct: 420 tcaaccacagtcactgttgatgaagcactaactggtttgaagacttcatttgccttcaag 479

                                     
Query: 395 gttcctgatcaaaagtcagggaagct 420
           ||||| ||||| ||||| ||||||||
Sbjct: 480 gttccagatcacaagtctgggaagct 505
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>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003A09, complete sequence
          Length = 167222

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                         
Query: 332   gtgtcaaccgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttc 391
             ||||||||| | |||||| |||||||||   |  ||||| |||||||||||||  |||||
Sbjct: 90575 gtgtcaaccacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttc 90634

                                        
Query: 392   aaggttcctgatcaaaagtcagggaag 418
             | |||||||||||||||||| ||||||
Sbjct: 90635 agggttcctgatcaaaagtccgggaag 90661



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                
Query: 158   ttgtacaaggactacaattttgaccaaaagttttc 192
             |||||||||||||||||||||||||||||||||||
Sbjct: 89801 ttgtacaaggactacaattttgaccaaaagttttc 89835



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 251   gaactcttcatcggtgacatacgggtacaacataaaagtggtagaaatactgttgatgtc 310
             |||||||||||||||||||||| |  ||||||||||||||| | ||  ||||||||||||
Sbjct: 89983 gaactcttcatcggtgacatacagacacaacataaaagtggcaaaaccactgttgatgtc 90042

              
Query: 311   a 311
             |
Sbjct: 90043 a 90043



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 100   aaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaa 149
             |||||||||||||||||| | ||||||||  | | ||||||||| |||||
Sbjct: 89088 aaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaa 89137
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                           
Query: 332     gtgtcaaccgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttc 391
               ||||||||| | |||||| |||||||||   |  ||||| |||||||||||||  |||||
Sbjct: 2053152 gtgtcaaccacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttc 2053211

                                          
Query: 392     aaggttcctgatcaaaagtcagggaag 418
               | |||||||||||||||||| ||||||
Sbjct: 2053212 agggttcctgatcaaaagtccgggaag 2053238



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                  
Query: 158     ttgtacaaggactacaattttgaccaaaagttttc 192
               |||||||||||||||||||||||||||||||||||
Sbjct: 2052378 ttgtacaaggactacaattttgaccaaaagttttc 2052412



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                           
Query: 251     gaactcttcatcggtgacatacgggtacaacataaaagtggtagaaatactgttgatgtc 310
               |||||||||||||||||||||| |  ||||||||||||||| | ||  ||||||||||||
Sbjct: 2052560 gaactcttcatcggtgacatacagacacaacataaaagtggcaaaaccactgttgatgtc 2052619

                
Query: 311     a 311
               |
Sbjct: 2052620 a 2052620



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                 
Query: 100     aaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaa 149
               |||||||||||||||||| | ||||||||  | | ||||||||| |||||
Sbjct: 2051665 aaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaa 2051714



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 7        tcgccgtcgccgttcatcgc 26
                ||||||||||||||||||||
Sbjct: 23801766 tcgccgtcgccgttcatcgc 23801747



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 2       cgccgtcgccgtcgccgttc 21
               ||||||||||||||||||||
Sbjct: 6520044 cgccgtcgccgtcgccgttc 6520025
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                           
Query: 332     gtgtcaaccgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttc 391
               ||||||||| | |||||| |||||||||   |  ||||| |||||||||||||  |||||
Sbjct: 2053164 gtgtcaaccacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttc 2053223

                                          
Query: 392     aaggttcctgatcaaaagtcagggaag 418
               | |||||||||||||||||| ||||||
Sbjct: 2053224 agggttcctgatcaaaagtccgggaag 2053250



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                  
Query: 158     ttgtacaaggactacaattttgaccaaaagttttc 192
               |||||||||||||||||||||||||||||||||||
Sbjct: 2052390 ttgtacaaggactacaattttgaccaaaagttttc 2052424



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                           
Query: 251     gaactcttcatcggtgacatacgggtacaacataaaagtggtagaaatactgttgatgtc 310
               |||||||||||||||||||||| |  ||||||||||||||| | ||  ||||||||||||
Sbjct: 2052572 gaactcttcatcggtgacatacagacacaacataaaagtggcaaaaccactgttgatgtc 2052631

                
Query: 311     a 311
               |
Sbjct: 2052632 a 2052632



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                 
Query: 100     aaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaa 149
               |||||||||||||||||| | ||||||||  | | ||||||||| |||||
Sbjct: 2051677 aaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaa 2051726



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 7        tcgccgtcgccgttcatcgc 26
                ||||||||||||||||||||
Sbjct: 23794854 tcgccgtcgccgttcatcgc 23794835



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 2       cgccgtcgccgtcgccgttc 21
               ||||||||||||||||||||
Sbjct: 6519257 cgccgtcgccgtcgccgttc 6519238
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>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence
          Length = 112592

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 332   gtgtcaaccgcggtcacttttgatgaagtagtccctggtttgaagacttctttcggcttc 391
             ||||||||| | |||||| ||||||||| | |  ||||||||||||| || |||| ||||
Sbjct: 36333 gtgtcaaccacagtcactgttgatgaagcactaactggtttgaagacctcattcgccttc 36274

                                 
Query: 392   aaggttcctgatcaaaagtc 411
             |||||||| ||||| |||||
Sbjct: 36273 aaggttccagatcacaagtc 36254



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 256   cttcatcggtgacatacgggtacaacataaaagtggtagaaatactgttgatgtca 311
             |||||| ||||  ||||||  ||| |||||||||||||||| ||||||||||||||
Sbjct: 36907 cttcattggtgttatacggacacagcataaaagtggtagaactactgttgatgtca 36852



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 159   tgtacaaggactacaattttgaccaaaagttttc 192
             |||||||||||||||| |||||||| ||||||||
Sbjct: 37089 tgtacaaggactacaactttgaccagaagttttc 37056



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 95    ttgggaaggatgagcaaaggcccggttcc 123
             ||||||||||||||||||||||| |||||
Sbjct: 37620 ttgggaaggatgagcaaaggcccagttcc 37592
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>emb|AL357519.19| Human DNA sequence from clone RP11-367G18 on chromosome 6 Contains a
             putative novel gene and a ubiquitin/ ribosomal protein
             S27A (RPS27A) fusion protein pseudogene, complete sequence
          Length = 157021

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   gaagaaagcaagagatatcttg 160
             ||||||||||||||||||||||
Sbjct: 24753 gaagaaagcaagagatatcttg 24732
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>dbj|AK107864.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B12, full
           insert sequence
          Length = 450

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 100 aaggatgagcaaaggcccggttccgttccctatctttgggaagaaagcaa 149
           |||||||||||||||||| | ||||||||  | | ||||||||| |||||
Sbjct: 144 aaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaa 193
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>gb|AY316741.1| Lotus corniculatus var. japonicus VDAC3.1 mRNA, complete cds
          Length = 1210

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 146 gcaagagatatcttgtacaaggactacaattttgaccaaaagttt 190
           ||||||||  ||||||||||||| || || ||||| |||||||||
Sbjct: 182 gcaagagacctcttgtacaaggattataactttgatcaaaagttt 226
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>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25,
             complete sequence
          Length = 169168

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    cgcgccccggccgcagccccc 44
             |||||||||||||||||||||
Sbjct: 71397 cgcgccccggccgcagccccc 71417
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 241     gaagtttgatgaactcttcatcggt 265
               |||| ||||||||||||||||||||
Sbjct: 2926602 gaagcttgatgaactcttcatcggt 2926578
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>gb|AC123697.19| Mus musculus chromosome 5, clone RP23-329M7, complete sequence
          Length = 183171

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   aaagttttcatggtcaacaa 203
             ||||||||||||||||||||
Sbjct: 19690 aaagttttcatggtcaacaa 19671
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>ref|XM_466319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 552

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   acgccgtcgccgtcgccgtt 20
           ||||||||||||||||||||
Sbjct: 466 acgccgtcgccgtcgccgtt 447
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>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map
              near E1419S, complete sequence
          Length = 133421

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      tcgccgtcgccgttcatcgc 26
              ||||||||||||||||||||
Sbjct: 102184 tcgccgtcgccgttcatcgc 102203
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 2       cgccgtcgccgtcgccgttc 21
               ||||||||||||||||||||
Sbjct: 1380273 cgccgtcgccgtcgccgttc 1380254
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>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      cgccgtcgccgtcgccgttc 21
              ||||||||||||||||||||
Sbjct: 124856 cgccgtcgccgtcgccgttc 124875
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 2       cgccgtcgccgtcgccgttc 21
               ||||||||||||||||||||
Sbjct: 2605061 cgccgtcgccgtcgccgttc 2605042
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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     cgccgtcgccgtcgccgttc 21
             ||||||||||||||||||||
Sbjct: 62806 cgccgtcgccgtcgccgttc 62787
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>emb|AL445225.9| Human DNA sequence from clone RP11-4D11 on chromosome 13, complete
             sequence
          Length = 171764

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   gttgatgtcacaatagattg 321
             ||||||||||||||||||||
Sbjct: 44857 gttgatgtcacaatagattg 44876
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 2       cgccgtcgccgtcgccgttc 21
               ||||||||||||||||||||
Sbjct: 2493144 cgccgtcgccgtcgccgttc 2493163
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 2       cgccgtcgccgtcgccgttc 21
               ||||||||||||||||||||
Sbjct: 1777091 cgccgtcgccgtcgccgttc 1777110
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     cgcgccccggccgcagcccc 43
              ||||||||||||||||||||
Sbjct: 284913 cgcgccccggccgcagcccc 284894
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>gb|AC091976.2| Homo sapiens chromosome 5 clone RP11-528F16, complete sequence
          Length = 175529

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ccgcagcccccctccacccc 53
             ||||||||||||||||||||
Sbjct: 74622 ccgcagcccccctccacccc 74603
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>emb|BX663611.13| Zebrafish DNA sequence from clone DKEY-148N20 in linkage group 14,
              complete sequence
          Length = 213131

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    gactacaattttgaccaaaa 186
              ||||||||||||||||||||
Sbjct: 101691 gactacaattttgaccaaaa 101710
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 2        cgccgtcgccgtcgccgttc 21
                ||||||||||||||||||||
Sbjct: 26411431 cgccgtcgccgtcgccgttc 26411450
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        acgccgtcgccgtcgccgtt 20
                ||||||||||||||||||||
Sbjct: 21645032 acgccgtcgccgtcgccgtt 21645013
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>emb|BX284689.6| Zebrafish DNA sequence from clone CH211-106B10 in linkage group 14,
             complete sequence
          Length = 164905

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gactacaattttgaccaaaa 186
             ||||||||||||||||||||
Sbjct: 58520 gactacaattttgaccaaaa 58539
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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      acgccgtcgccgtcgccgtt 20
              ||||||||||||||||||||
Sbjct: 133982 acgccgtcgccgtcgccgtt 133963
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>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0025F02
          Length = 156545

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acgccgtcgccgtcgccgtt 20
             ||||||||||||||||||||
Sbjct: 26429 acgccgtcgccgtcgccgtt 26410
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>dbj|AK099948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D13, full
           insert sequence
          Length = 1956

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   tcgccgtcgccgttcatcgc 26
           ||||||||||||||||||||
Sbjct: 796 tcgccgtcgccgttcatcgc 777
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>emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 in linkage group 18,
              complete sequence
          Length = 183462

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    ggtttgaagacttctttcgg 387
              ||||||||||||||||||||
Sbjct: 118661 ggtttgaagacttctttcgg 118642
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>emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 in linkage group 18,
             complete sequence
          Length = 150831

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   ggtttgaagacttctttcgg 387
             ||||||||||||||||||||
Sbjct: 14176 ggtttgaagacttctttcgg 14157
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>gb|AY112607.1| Zea mays CL50534_1 mRNA sequence
          Length = 567

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   cgccgtcgccgtcgccgttc 21
           ||||||||||||||||||||
Sbjct: 442 cgccgtcgccgtcgccgttc 423
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 2        cgccgtcgccgtcgccgttc 21
                ||||||||||||||||||||
Sbjct: 26737282 cgccgtcgccgtcgccgttc 26737301
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>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete
             sequence
          Length = 194045

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ttccctatctttgggaagaa 144
             ||||||||||||||||||||
Sbjct: 34465 ttccctatctttgggaagaa 34484


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,627,578
Number of Sequences: 3902068
Number of extensions: 3627578
Number of successful extensions: 88777
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87895
Number of HSP's gapped (non-prelim): 879
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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