Clone Name | bart09g09 |
---|---|
Clone Library Name | barley_pub |
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 30.0 bits (66), Expect = 2.7 Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Frame = +2 Query: 53 LFPFPFRLALHPRPHAL--------------PAMCGGAILSDIIPPPRRAAGGRLWQADR 190 LFP P+R AL P AL A CGG D P P AAGGRL+ Sbjct: 849 LFPVPWRPALMFDPRALASIAARCAGPAPAAQAACGGGD-DDDNPHPHGAAGGRLF---G 904 Query: 191 KKRRAGPRR 217 R +GP R Sbjct: 905 PLRASGPLR 913
>K0220_HUMAN (Q92617) Protein KIAA0220 (Fragment)| Length = 884 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = +2 Query: 14 HQPPRLVSSRSVSLFPFPFRLALHPR----PHALPAMCGG 121 H P ++S S+ PF LHP+ LP++CGG Sbjct: 454 HHQPMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGG 493
>ARGC2_LACPL (O08318) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC| 1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde dehydrogenase 2) (NAGSA dehydrogenase 2) Length = 341 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +2 Query: 335 RSGFSGDGLKATAAGEYDCASGSAKRKRKNQFRGIP 442 +SG SG G +ATAA Y + + + NQ + IP Sbjct: 174 KSGLSGAGKRATAASHYVAVNDNLSLYKLNQHQHIP 209
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.5 bits (62), Expect = 7.7 Identities = 22/57 (38%), Positives = 24/57 (42%) Frame = +2 Query: 2 SSHTHQPPRLVSSRSVSLFPFPFRLALHPRPHALPAMCGGAILSDIIPPPRRAAGGR 172 S H PP + L P P AL PRP ALP A+L PPP G R Sbjct: 271 SIHVSIPPSGLRREEPDLQPQPASDALRPRP-ALPPPSKSALL----PPPSPRVGKR 322
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%) Frame = +2 Query: 86 PRPHALPAMCGGAILSDII-PPPRRAAGGRLWQADRKKRRAGPRR 217 P PH P GG + ++ PPP G W R GP R Sbjct: 652 PGPHGGPGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMR 696
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.5 bits (62), Expect = 7.7 Identities = 22/57 (38%), Positives = 24/57 (42%) Frame = +2 Query: 2 SSHTHQPPRLVSSRSVSLFPFPFRLALHPRPHALPAMCGGAILSDIIPPPRRAAGGR 172 S H PP + L P P AL PRP ALP A+L PPP G R Sbjct: 271 SIHVSIPPSGLHREEPDLQPQPASDALRPRP-ALPPPSKSALL----PPPSPRVGKR 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,456,456 Number of Sequences: 219361 Number of extensions: 579022 Number of successful extensions: 1734 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1733 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)