>IF6_BETVU (O81920) Eukaryotic translation initiation factor 6 (eIF-6)|
           (Fragment)
          Length = 193

 Score =  207 bits (528), Expect = 9e-54
 Identities = 100/118 (84%), Positives = 109/118 (92%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           MATR+ FENNCEVGVFSKLTNAYCLVAIGGSENFYSTFE+ELAD IPVVKTSI GTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIG 60

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
                NKNGLL+PHTTTDQELQHLRNC+PD VVVQRI+E+LSALG+CI+CND+VALTH
Sbjct: 61  PNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTH 118

>IF6_MOUSE (O55135) Eukaryotic translation initiation factor 6 (eIF-6) (B4|
           integrin interactor) (CAB) (p27(BBP))
          Length = 245

 Score =  182 bits (462), Expect = 4e-46
 Identities = 84/118 (71%), Positives = 100/118 (84%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           MA R  FENNCEVG F+KLTNAYCLVAIGGSENFYS FE EL+D IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIG 60

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           R+CVGN++GLL+P+ TTDQELQH+RN +PD V ++R++ERLSALG+  +CND+VAL H
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVH 118

>IF6_HUMAN (P56537) Eukaryotic translation initiation factor 6 (eIF-6) (B4|
           integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog)
          Length = 245

 Score =  180 bits (456), Expect = 2e-45
 Identities = 82/118 (69%), Positives = 99/118 (83%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           MA R  FENNCE+G F+KLTN YCLVAIGGSENFYS FE EL+D IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           R+CVGN++GLL+P+ TTDQELQH+RN +PD V ++R++ERLSALG+  +CND+VAL H
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVH 118

>IF6_YEAST (Q12522) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 245

 Score =  177 bits (448), Expect = 2e-44
 Identities = 83/118 (70%), Positives = 98/118 (83%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           MATR  FEN+ E+GVFSKLTN YCLVA+GGSENFYS FE+EL D IP+V T+I GTRIIG
Sbjct: 1   MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIG 60

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           R+  GN+ GLL+P  TTDQELQHLRN +PD V +QR++ERLSALG+ I CND+VAL H
Sbjct: 61  RMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVH 118

>IF6_DROME (P56538) Probable eukaryotic translation initiation factor 6|
           (eIF-6)
          Length = 245

 Score =  175 bits (444), Expect = 5e-44
 Identities = 81/118 (68%), Positives = 100/118 (84%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           MA R+ FENN ++GVF+KLTN YCLVAIGGSE FYS FE+EL D IPVV  ++GG RIIG
Sbjct: 1   MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIG 60

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           RL VGN+NGLL+P++TTD+ELQHLRN +PD V + R++ERLSALG+ I+CND+VAL H
Sbjct: 61  RLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVH 118

>IF6_SCHPO (O94476) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 244

 Score =  174 bits (441), Expect = 1e-43
 Identities = 82/118 (69%), Positives = 99/118 (83%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           MA R  FEN+ E+GVFS LTN+Y LVA+GGSENFYS FE+EL DV+PVV T+IGGTRIIG
Sbjct: 1   MALRAQFENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIG 60

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           RL  GN+ GLL+P +TTD ELQHLRN +PD V +QR+DERLSALG+ ++CND+VAL H
Sbjct: 61  RLTCGNRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVH 118

>IF6_CAEEL (O62106) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 246

 Score =  169 bits (428), Expect = 4e-42
 Identities = 76/118 (64%), Positives = 100/118 (84%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           MA R+ +E + +VGVF  LTN+YCLV +GG++NFYS  E+EL+D+IPVV TSI  TRI+G
Sbjct: 1   MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVG 60

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           RL VGN++GLL+P+ TTDQELQHLRN +PD+V ++R+DERLSALG+ I+CNDHVA+ H
Sbjct: 61  RLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVH 118

>IF6_ARATH (O22290) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 247

 Score =  164 bits (414), Expect = 2e-40
 Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 2/120 (1%)
 Frame = +2

Query: 131 MATRIXFENN-CEVGVFSKLTNAYCLV-AIGGSENFYSTFESELADVIPVVKTSIGGTRI 304
           MATR+ ++NN CE+GVFSKLTNAYCLV A   S NF++ +ES+L  VIP+V TSIGG+  
Sbjct: 1   MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGT 60

Query: 305 IGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           IG LCVGNKNGLLL HT TDQELQHLR+ +PD+VVVQRI+E + ALG+ I+CND+VAL H
Sbjct: 61  IGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVH 120

>IF6_PYRKO (Q5JGT4) Translation initiation factor 6 (aIF-6)|
          Length = 229

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
 Frame = +2

Query: 140 RIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 319
           R+ FEN+  +GV+ + T+   L+  G  E         L   +P+++TSI  +RI+G   
Sbjct: 5   RLDFENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFA 62

Query: 320 VGNKNGLLLPHTTTDQELQHLRNCIPD---QVVVQRIDERLSALGHCISCNDHVAL 478
            GN N +++P    D EL+ ++  + +    + V     RL+ALG+ I  ND  AL
Sbjct: 63  AGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAAL 118



 Score = 28.5 bits (62), Expect = 9.9
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 251 ELADVIPVVKTSIGGTRIIGRL-CVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDE 427
           E+  V  V +  I   R +G +  V NK GL+ P  T D+EL+ L +     + V   + 
Sbjct: 133 EILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEAT-DEELEWLSDLFGVDIYVGTANM 191

Query: 428 RLSALGHCISCNDH 469
            +  +G C+  N +
Sbjct: 192 GVPFVGSCMLANSY 205

>IF6_PYRHO (O58264) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 58.9 bits (141), Expect = 7e-09
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = +2

Query: 140 RIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 319
           R+ FEN+  +GVF   T+   L+  G  E         L   +PV++ S+  +RIIG L 
Sbjct: 5   RLDFENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLA 62

Query: 320 VGNKNGLLLPHTTTDQELQHLRNCIPD---QVVVQRIDERLSALGHCISCNDHVAL 478
            GN N ++LP    D E++ ++  + +    + V     + +ALG+ I  ND  AL
Sbjct: 63  TGNSNAIILPWYVWDAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAAL 118

>IF6_PYRAB (Q9UYI6) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = +2

Query: 140 RIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 319
           R+ FEN+  +GVF   T+   LV  G  E         L   +PV++ SI  +RIIG L 
Sbjct: 5   RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLA 62

Query: 320 VGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRI---DERLSALGHCISCNDHVAL 478
            GN N +L+P    D E++ +++   +  +   I     + +ALG+ I  ND  AL
Sbjct: 63  TGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAAL 118



 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 248 SELADVIPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCI 394
           SEL  V   V T+  G   +G   + N NG+++ H TT  E+  +   +
Sbjct: 176 SELFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIEEAL 224

>IF6_METTH (O27648) Translation initiation factor 6 (aIF-6)|
          Length = 222

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 36/116 (31%), Positives = 58/116 (50%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           M  RI    N  +GV+  +T++  L+     E F       L   + V+K SI G+ + G
Sbjct: 1   MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNG 58

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVAL 478
            L VGN NG ++ +   D+E+  L     + V   RI ER +A+G+ +  ND+ A+
Sbjct: 59  ALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAV 111



 Score = 28.5 bits (62), Expect = 9.9
 Identities = 23/76 (30%), Positives = 29/76 (38%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 346
           VG     TN   L+    S       E  L  V   V T   G  +IG   V N NG+L+
Sbjct: 143 VGSMGAATNRGALLNPQASSEEIGIIEDTLG-VEADVGTVNHGVTLIGACSVANSNGVLV 201

Query: 347 PHTTTDQELQHLRNCI 394
              TT  EL  +   +
Sbjct: 202 GEETTGPELARIEEAL 217

>IF6_PYRFU (Q8U3S8) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = +2

Query: 140 RIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 319
           ++ FEN+  +GVF   T+   L+  G  E         L   +PVV+ S+  +RIIG L 
Sbjct: 5   KLDFENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLG 62

Query: 320 VGNKNGLLLPHTTTDQELQHLRNCIPDQVV---VQRIDERLSALGHCISCNDHVAL 478
            GN N +++P    D EL+ ++N   +  +   V     + +ALG+ I  ND  AL
Sbjct: 63  AGNSNAIIVPWYVWDSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGAL 118

>IF6_METMA (Q8PYQ3) Translation initiation factor 6 (aIF-6)|
          Length = 219

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 35/106 (33%), Positives = 56/106 (52%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 346
           +GVF+  T    LV         +  E  L   + VV+T I G+ ++G L  GN NG LL
Sbjct: 13  IGVFATCTEDLALVPPLTKPEVCTILEEALD--VRVVETLINGSTVVGALSRGNSNGFLL 70

Query: 347 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           P+ ++ +E+Q  R  +P  +    + +RL+A+G+ +  ND  AL H
Sbjct: 71  PYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVH 111

>IF6_METJA (Q60357) Translation initiation factor 6 (aIF-6)|
          Length = 228

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = +2

Query: 128 TMATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPV--VKTSIGGTR 301
           TM  R  F     +GV +  T    L+ I   ++  +    E+++V+    ++T+IGG+ 
Sbjct: 2   TMIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVN----EVSEVLETKCLQTNIGGSS 57

Query: 302 IIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPD---QVVVQRIDERLSALGHCISCNDHV 472
           ++G L V NK GLLLP    D+EL  ++N + +    + V+ I  + +ALG+ I  ND  
Sbjct: 58  LVGSLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKG 117

Query: 473 AL 478
           AL
Sbjct: 118 AL 119

>IF6_METMP (Q6M156) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           M  +  F     +GV S  T  Y    +   +      ++ L   IP  + +I  + +IG
Sbjct: 1   MIMKTYFSGVSTLGVHSLATEDYGFFPLSVDQKTMERMKNVLD--IPATQLNISNSSLIG 58

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPD---QVVVQRIDERLSALGHCISCND 466
            LCVGN NGLL+P+ TT++EL+ ++  + +    V ++R+  + +A G+ I  N+
Sbjct: 59  SLCVGNSNGLLVPNITTEKELELIKMFLKENSLDVNLERLKAKNTAFGNLILTNN 113

>IF6_METKA (Q8TUY5) Translation initiation factor 6 (aIF-6)|
          Length = 221

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 28/106 (26%), Positives = 53/106 (50%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 346
           +G +   +  Y +VA    ++     +  L   + VV+T++ G+ ++G L   N NG L 
Sbjct: 14  IGAWIAASEEYAVVAPKVPDDIVERVKEALD--VEVVRTTVAGSNLVGALLAVNSNGALF 71

Query: 347 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           P    + E++ +R      V V  +  +++A+G+ +  NDH AL H
Sbjct: 72  PRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVH 114

>IF6_AERPE (Q9YD27) Translation initiation factor 6 (aIF-6)|
          Length = 233

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +2

Query: 140 RIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIP-VVKTSIGGTRIIGRL 316
           ++    N  +GV+   +++Y L       +   T    L   +  VV+  + G R++G L
Sbjct: 11  KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVL 70

Query: 317 CVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVAL 478
             GN  G+LLP    D+E++ +R  + + V V  +  R +ALG+ I CND   L
Sbjct: 71  TTGNSRGILLPE-GVDREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACL 122

>IF6_PICTO (Q6L2L0) Translation initiation factor 6 (aIF-6)|
          Length = 217

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 32/118 (27%), Positives = 58/118 (49%)
 Frame = +2

Query: 131 MATRIXFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 310
           M  ++   N+  +GV+++  N    + +  S+     FE  L     V K SIG + +IG
Sbjct: 1   MIKKVSILNSNFIGVYARTWNDVTFLPVNISDEEKRIFEETLKT--EVYKISIGNSFLIG 58

Query: 311 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
            +   N NG+++     D  + +L++   +   +  I+ +L+A G+ I  NDH AL H
Sbjct: 59  SMLSMNSNGIVV----ADHGIDNLKSLNINGRNILSINNKLNAAGNNIIANDHAALIH 112

>IF6_SULSO (Q980G0) Translation initiation factor 6 (aIF-6)|
          Length = 223

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVI--PVVKTSIGGTRIIGRLCVGNKNGL 340
           +GV+    N Y ++  G      S  +  +A V+   +++  I  + ++G    GN NG+
Sbjct: 14  IGVYIYTNNKYTIIPRG----LDSETKENIAQVLGTELLEAEISRSFLLGIFISGNDNGI 69

Query: 341 LLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           LLP +T D E + L+  + D   V+ ++ +++ALG+ I  N+  AL +
Sbjct: 70  LLPKSTIDDEFRFLKENLRD-CRVEILNSKVTALGNTILANNKAALIY 116

>IF6_METAC (Q8TIN4) Translation initiation factor 6 (aIF-6)|
          Length = 218

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 33/106 (31%), Positives = 54/106 (50%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 346
           +GVF+  T    LV         +  E E+ DV  V++T + G+ ++G L  GN NG +L
Sbjct: 13  IGVFATCTEDVVLVPPLTKPEVCALLE-EVLDV-RVIETLVNGSIVVGALSRGNSNGFML 70

Query: 347 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           P+     E+Q   +     + V  + +RL+A+G+ +  ND  AL H
Sbjct: 71  PYGAR-AEMQRFTD-----IPVGILPDRLNAVGNIVFANDSAALVH 110

>IF6_SULTO (Q971I4) Translation initiation factor 6 (aIF-6)|
          Length = 223

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVA----IGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKN 334
           +G++    + Y +V     +   +    TF++E      +++T+I  + +IG    GN N
Sbjct: 14  IGIYIFTNDKYTIVPKNLDVETIQKIQETFKTE------IIQTTIAKSFLIGIFVAGNNN 67

Query: 335 GLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
            +LLP    D+E++ +++   D V V+ +D R +ALG+ I  N + AL +
Sbjct: 68  VILLPRNVDDEEVKKIKDIARD-VRVEILDIRPTALGNIILTNSYGALIY 116

>IF6_THEAC (Q9HM16) Translation initiation factor 6 (aIF-6)|
          Length = 216

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 28/106 (26%), Positives = 55/106 (51%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 346
           +G+++K  +    + +   E   + F+  L   + V + SI  + +IG + V N NGL++
Sbjct: 13  IGIYAKAWDDVAFITMMADEKTVADFQEVLQ--VDVRRISIDNSSLIGTMMVMNSNGLIV 70

Query: 347 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           P+ +    L  L     D   V ++ ++++A+G+ I  NDH A+ H
Sbjct: 71  PYGSEITGLGDL-----DGRNVLQLKDKINAIGNDIIANDHGAIIH 111

>IF6_THEVO (Q97CU0) Translation initiation factor 6 (aIF-6)|
          Length = 218

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 26/106 (24%), Positives = 52/106 (49%)
 Frame = +2

Query: 167 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 346
           +G+++K  +    +     E   + F   L   + + + SI G+ +IG +   N NG++L
Sbjct: 15  IGIYAKAWDDVAFITKMADEKTVNEFREVLQ--VDIKRISIDGSTLIGTMIAVNSNGIVL 72

Query: 347 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHCISCNDHVALTH 484
           P+ +    L  +     D   V  + ++++A+G+ I  NDH A+ H
Sbjct: 73  PYGSNIDGLDGI-----DGRNVLYLKDKINAVGNDIIANDHGAIIH 113



 Score = 30.0 bits (66), Expect = 3.4
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 230 FYSTFESELADVIPV--VKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRN 388
           F +    E+ D + V  ++TSIG    +G   V    G+L+   T D EL+ L++
Sbjct: 116 FSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKD 170

>IF6_SULAC (P38619) Translation initiation factor 6 (aIF-6)|
          Length = 223

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 24/71 (33%), Positives = 42/71 (59%)
 Frame = +2

Query: 272 VVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGHC 451
           +++T+I  + ++G L  GN + +LLP T    E++ ++    D V V+ +D R +ALG+ 
Sbjct: 47  IIQTTISKSVLVGILVTGNNDVILLPRTALADEIKVIKEQAKD-VRVEVVDIRPTALGNI 105

Query: 452 ISCNDHVALTH 484
           I  N H AL +
Sbjct: 106 ILSNTHGALIY 116

>YPOB_STYLE (P14289) Hypothetical 22 kDa protein in overamplified macronuclear|
           DNA POB4
          Length = 204

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 284 SIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRI 421
           ++GG R  GR+C+G+     +P TTT     H  N    QV+ Q++
Sbjct: 93  AMGGRRSGGRICLGDPGAAAIPTTTTAPTATHQPNQQRQQVIPQQM 138

>MSRA1_LACLA (Q9CFC8) Peptide methionine sulfoxide reductase msrA 1 (EC 1.8.4.6)|
           (Protein-methionine-S-oxide reductase 1) (Peptide Met(O)
           reductase 1)
          Length = 183

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = +3

Query: 195 PTVWLQLEDQRISTVHLSLSLQMSFLWSRPLSVALE 302
           P ++++ E+QRI+     ++L+ S +W +P+ V +E
Sbjct: 97  PVIFVESEEQRIAAQKSKIALEKSGIWDKPIVVPIE 132

>PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2)|
          Length = 623

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 263 HLQAQTQMYCRNSLILQ--LQPDSRHL*AWRKHQLHSCSQTGYGSPWSIPLXRLSRFSSA 90
           H   Q     + SL+LQ   Q   +H      HQ     Q GYGS   +P  RLS  S+ 
Sbjct: 100 HTMQQQLQQQQQSLLLQHPQQQQQQH-----SHQSQQQQQHGYGSSAQLPHHRLSGGSTG 154

Query: 89  ATST 78
           +T+T
Sbjct: 155 STTT 158

>SGCB_HUMAN (Q16585) Beta-sarcoglycan (Beta-SG) (43 kDa dystrophin-associated|
           glycoprotein) (43DAG) (A3b)
          Length = 318

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +2

Query: 248 SELADVIPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDE 427
           S++  + P+ K+++GG R    +  GN   ++    TT   +++ +  I   + +Q  D 
Sbjct: 114 SDMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVENNKTSITSDIGMQFFDP 173

Query: 428 R 430
           R
Sbjct: 174 R 174

>VGLM_BUNGE (P12430) M polyprotein precursor [Contains: Glycoprotein G2;|
           Nonstructural protein NS-M; Glycoprotein G1]
          Length = 1437

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 390 AYLIKWLFSASMKGCLPLGIAYPAMTMLRSH 482
           AYL  WL++ S K C+  G+AY   T   S+
Sbjct: 244 AYLYGWLYNRSCKKCICCGLAYHPFTNCGSY 274

>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
          Length = 1875

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 382 QMLKLLISGCVWQEKSILVSNTEAANYSSATDRG-LDHRNDICKLR 248
           Q L LL S   W EK +   N +  +Y   TD+  LD RN++ +LR
Sbjct: 202 QELTLLQSNNDWLEKELRSKNEQYLSYRQKTDKVILDIRNELNRLR 247

>SGCB_MOUSE (P82349) Beta-sarcoglycan (Beta-SG) (43 kDa dystrophin-associated|
           glycoprotein) (43DAG)
          Length = 320

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +2

Query: 248 SELADVIPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDE 427
           S++  + P+ K+++GG R    +  GN   ++    TT   ++  +  I   + +Q  D 
Sbjct: 116 SDMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVEKNKTSITSDIGMQFFDP 175

Query: 428 R 430
           R
Sbjct: 176 R 176

>SGCB_MESAU (Q60538) Beta-sarcoglycan (Beta-SG) (43 kDa dystrophin-associated|
           glycoprotein) (43DAG)
          Length = 320

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +2

Query: 248 SELADVIPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDE 427
           S++  + P+ K+++GG R    +  GN   ++    TT   ++  +  I   + +Q  D 
Sbjct: 116 SDMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVEKNKTSITSDIGMQFFDP 175

Query: 428 R 430
           R
Sbjct: 176 R 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,126,727
Number of Sequences: 219361
Number of extensions: 1288717
Number of successful extensions: 3558
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3546
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)