ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart09g07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479285.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1058 Score = 434 bits (219), Expect = e-118 Identities = 329/366 (89%) Strand = Plus / Plus Query: 121 ggaatcgaccatggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctc 180 |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 124 ggaatcgaccatggcgacccgtattcagtttgagaacaattgtgaagttggtgttttctc 183 Query: 181 caagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagtac 240 |||| | ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 184 caagttgacaaatgcctattgtcttgttgcaattggaggatcagagaacttctacagtgc 243 Query: 241 atttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactag 300 ||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 244 ctttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactag 303 Query: 301 aataattggccgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccac 360 ||||||||| || |||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 304 aataattggtcgtctctgtgtcggaaacaagaatggacttctcttgcctcacactaccac 363 Query: 361 tgatcaagagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcat 420 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 364 cgatcaagagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtat 423 Query: 421 cgatgaaaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcac 480 ||||||||||| ||||| ||||| |||| || | |||||||||||||| ||||| || Sbjct: 424 tgatgaaaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttac 483 Query: 481 acaccc 486 |||||| Sbjct: 484 acaccc 489
>ref|XM_506503.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1340_C08.131 mRNA Length = 1102 Score = 434 bits (219), Expect = e-118 Identities = 329/366 (89%) Strand = Plus / Plus Query: 121 ggaatcgaccatggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctc 180 |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 149 ggaatcgaccatggcgacccgtattcagtttgagaacaattgtgaagttggtgttttctc 208 Query: 181 caagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagtac 240 |||| | ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 209 caagttgacaaatgcctattgtcttgttgcaattggaggatcagagaacttctacagtgc 268 Query: 241 atttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactag 300 ||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 269 ctttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactag 328 Query: 301 aataattggccgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccac 360 ||||||||| || |||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 329 aataattggtcgtctctgtgtcggaaacaagaatggacttctcttgcctcacactaccac 388 Query: 361 tgatcaagagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcat 420 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 389 cgatcaagagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtat 448 Query: 421 cgatgaaaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcac 480 ||||||||||| ||||| ||||| |||| || | |||||||||||||| ||||| || Sbjct: 449 tgatgaaaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttac 508 Query: 481 acaccc 486 |||||| Sbjct: 509 acaccc 514
>dbj|AK104592.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B01, full insert sequence Length = 1058 Score = 434 bits (219), Expect = e-118 Identities = 329/366 (89%) Strand = Plus / Plus Query: 121 ggaatcgaccatggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctc 180 |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 124 ggaatcgaccatggcgacccgtattcagtttgagaacaattgtgaagttggtgttttctc 183 Query: 181 caagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagtac 240 |||| | ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 184 caagttgacaaatgcctattgtcttgttgcaattggaggatcagagaacttctacagtgc 243 Query: 241 atttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactag 300 ||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 244 ctttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactag 303 Query: 301 aataattggccgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccac 360 ||||||||| || |||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 304 aataattggtcgtctctgtgtcggaaacaagaatggacttctcttgcctcacactaccac 363 Query: 361 tgatcaagagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcat 420 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 364 cgatcaagagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtat 423 Query: 421 cgatgaaaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcac 480 ||||||||||| ||||| ||||| |||| || | |||||||||||||| ||||| || Sbjct: 424 tgatgaaaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttac 483 Query: 481 acaccc 486 |||||| Sbjct: 484 acaccc 489
>dbj|AK104739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D07, full insert sequence Length = 1058 Score = 434 bits (219), Expect = e-118 Identities = 329/366 (89%) Strand = Plus / Plus Query: 121 ggaatcgaccatggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctc 180 |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 124 ggaatcgaccatggcgacccgtattcagtttgagaacaattgtgaagttggtgttttctc 183 Query: 181 caagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagtac 240 |||| | ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 184 caagttgacaaatgcctattgtcttgttgcaattggaggatcagagaacttctacagtgc 243 Query: 241 atttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactag 300 ||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 244 ctttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactag 303 Query: 301 aataattggccgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccac 360 ||||||||| || |||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 304 aataattggtcgtctctgtgtcggaaacaagaatggacttctcttgcctcacactaccac 363 Query: 361 tgatcaagagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcat 420 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 364 cgatcaagagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtat 423 Query: 421 cgatgaaaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcac 480 ||||||||||| ||||| ||||| |||| || | |||||||||||||| ||||| || Sbjct: 424 tgatgaaaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttac 483 Query: 481 acaccc 486 |||||| Sbjct: 484 acaccc 489
>dbj|AK074012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074A21, full insert sequence Length = 1102 Score = 434 bits (219), Expect = e-118 Identities = 329/366 (89%) Strand = Plus / Plus Query: 121 ggaatcgaccatggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctc 180 |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 149 ggaatcgaccatggcgacccgtattcagtttgagaacaattgtgaagttggtgttttctc 208 Query: 181 caagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagtac 240 |||| | ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 209 caagttgacaaatgcctattgtcttgttgcaattggaggatcagagaacttctacagtgc 268 Query: 241 atttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactag 300 ||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 269 ctttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactag 328 Query: 301 aataattggccgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccac 360 ||||||||| || |||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 329 aataattggtcgtctctgtgtcggaaacaagaatggacttctcttgcctcacactaccac 388 Query: 361 tgatcaagagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcat 420 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 389 cgatcaagagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtat 448 Query: 421 cgatgaaaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcac 480 ||||||||||| ||||| ||||| |||| || | |||||||||||||| ||||| || Sbjct: 449 tgatgaaaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttac 508 Query: 481 acaccc 486 |||||| Sbjct: 509 acaccc 514
>gb|BT016214.1| Zea mays clone Contig47 mRNA sequence Length = 1121 Score = 422 bits (213), Expect = e-115 Identities = 317/352 (90%) Strand = Plus / Plus Query: 123 aatcgaccatggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctcca 182 ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 106 aatcgaccatggctacccgtatccagtttgagaacaactgtgaaattggtgttttctcca 165 Query: 183 agctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagtacat 242 |||| |||||||| ||||||||||| || |||||||| |||||||| ||||||||| | | Sbjct: 166 agctgacaaatgcttactgtctggtagcgattggagggtcagagaacttctacagtgcct 225 Query: 243 ttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactagaa 302 ||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| Sbjct: 226 ttgaggctgagcttgcagatgccatccctgtggtcaagacctctattggtggcactagaa 285 Query: 303 taattggccgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccactg 362 |||| ||||| || |||||||||||||||||||||||||| |||||||| || || || | Sbjct: 286 taataggccgactttgtgttggaaacaagaatggacttctattgccacatactacaaccg 345 Query: 363 atcaagagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcg 422 | ||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||| | Sbjct: 346 accaagagcttcagcatctgaggaattgcttgcctgatcaagtggtggttcagcgcattg 405 Query: 423 atgaaaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgc 474 |||| ||| | ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 406 atgagaggttatctgcccttggcaattgcatagcctgcaatgaccatgttgc 457
>gb|AY104396.1| Zea mays PCO098475 mRNA sequence Length = 1233 Score = 422 bits (213), Expect = e-115 Identities = 317/352 (90%) Strand = Plus / Plus Query: 123 aatcgaccatggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctcca 182 ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 170 aatcgaccatggctacccgtatccagtttgagaacaactgtgaaattggtgttttctcca 229 Query: 183 agctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagtacat 242 |||| |||||||| ||||||||||| || |||||||| |||||||| ||||||||| | | Sbjct: 230 agctgacaaatgcttactgtctggtagcgattggagggtcagagaacttctacagtgcct 289 Query: 243 ttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactagaa 302 ||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| Sbjct: 290 ttgaggctgagcttgcagatgccatccctgtggtcaagacctctattggtggcactagaa 349 Query: 303 taattggccgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccactg 362 |||| ||||| || |||||||||||||||||||||||||| |||||||| || || || | Sbjct: 350 taataggccgactttgtgttggaaacaagaatggacttctattgccacatactacaaccg 409 Query: 363 atcaagagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcg 422 | ||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||| | Sbjct: 410 accaagagcttcagcatctgaggaattgcttgcctgatcaagtggtggttcagcgcattg 469 Query: 423 atgaaaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgc 474 |||| ||| | ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 470 atgagaggttatctgcccttggcaattgcatagcctgcaatgaccatgttgc 521
>ref|NM_115420.2| Arabidopsis thaliana EMB1624; translation initiation factor AT3G55620 (EMB1624) mRNA, complete cds Length = 1087 Score = 139 bits (70), Expect = 1e-29 Identities = 273/341 (80%) Strand = Plus / Plus Query: 131 atggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctccaagctcaca 190 |||||||| ||| | | ||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 156 atggcgactcgtcttcagtttgagaacaactgcgaagttggtgtcttttccaaactcact 215 Query: 191 aatgcctactgtctggttgcaattggaggatcagagaatttctacagtacatttgagtct 250 |||||||| || | || || || ||||| || ||||| || |||||| | |||||||| Sbjct: 216 aatgcctattgcttagtcgctataggaggctctgagaacttttacagtgcttttgagtcg 275 Query: 251 gagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactagaataattggc 310 ||| | |||||||| || ||| | || ||||||||||| || || || |||| ||||| Sbjct: 276 gagttagcagatgttatccctattgttaagacctctattggaggaacacgaattattggg 335 Query: 311 cgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccactgatcaagag 370 || || |||| ||||||||||||||| ||||| | || || ||||| ||||| |||||| Sbjct: 336 cgtctttgtgctggaaacaagaatgggcttcttgtacctcatacaacaactgaccaagag 395 Query: 371 cttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatgaaagg 430 ||||| || | |||||| | ||||||||||||| || || ||||| || |||||| | Sbjct: 396 cttcaacacttaaggaacagtctacctgatcaagttgtggtccagcgaattgatgaacgt 455 Query: 431 ctgtctgcccttgggcattgcatatcctgcaatgaccatgt 471 |||||||| ||||| ||||||| ||||||||||| |||| Sbjct: 456 ctgtctgctcttggaaattgcattgcctgcaatgactatgt 496
>gb|BT009656.1| Arabidopsis thaliana At3g55620 mRNA, complete cds Length = 738 Score = 139 bits (70), Expect = 1e-29 Identities = 273/341 (80%) Strand = Plus / Plus Query: 131 atggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctccaagctcaca 190 |||||||| ||| | | ||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 1 atggcgactcgtcttcagtttgagaacaactgcgaagttggtgtcttttccaaactcact 60 Query: 191 aatgcctactgtctggttgcaattggaggatcagagaatttctacagtacatttgagtct 250 |||||||| || | || || || ||||| || ||||| || |||||| | |||||||| Sbjct: 61 aatgcctattgcttagtcgctataggaggctctgagaacttttacagtgcttttgagtcg 120 Query: 251 gagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactagaataattggc 310 ||| | |||||||| || ||| | || ||||||||||| || || || |||| ||||| Sbjct: 121 gagttagcagatgttatccctattgttaagacctctattggaggaacacgaattattggg 180 Query: 311 cgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccactgatcaagag 370 || || |||| ||||||||||||||| ||||| | || || ||||| ||||| |||||| Sbjct: 181 cgtctttgtgctggaaacaagaatgggcttcttgtacctcatacaacaactgaccaagag 240 Query: 371 cttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatgaaagg 430 ||||| || | |||||| | ||||||||||||| || || ||||| || |||||| | Sbjct: 241 cttcaacacttaaggaacagtctacctgatcaagttgtggtccagcgaattgatgaacgt 300 Query: 431 ctgtctgcccttgggcattgcatatcctgcaatgaccatgt 471 |||||||| ||||| ||||||| ||||||||||| |||| Sbjct: 301 ctgtctgctcttggaaattgcattgcctgcaatgactatgt 341
>gb|AY128351.1| Arabidopsis thaliana eukaryotic translation initiation factor 6 (EIF-6)-like protein (At3g55620) mRNA, complete cds Length = 1010 Score = 139 bits (70), Expect = 1e-29 Identities = 273/341 (80%) Strand = Plus / Plus Query: 131 atggcgacccgtatccngtttgagaacaactgtgaagttggtgttttctccaagctcaca 190 |||||||| ||| | | ||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 125 atggcgactcgtcttcagtttgagaacaactgcgaagttggtgtcttttccaaactcact 184 Query: 191 aatgcctactgtctggttgcaattggaggatcagagaatttctacagtacatttgagtct 250 |||||||| || | || || || ||||| || ||||| || |||||| | |||||||| Sbjct: 185 aatgcctattgcttagtcgctataggaggctctgagaacttttacagtgcttttgagtcg 244 Query: 251 gagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactagaataattggc 310 ||| | |||||||| || ||| | || ||||||||||| || || || |||| ||||| Sbjct: 245 gagttagcagatgttatccctattgttaagacctctattggaggaacacgaattattggg 304 Query: 311 cgcctctgtgttggaaacaagaatggacttctcttgccacacacaaccactgatcaagag 370 || || |||| ||||||||||||||| ||||| | || || ||||| ||||| |||||| Sbjct: 305 cgtctttgtgctggaaacaagaatgggcttcttgtacctcatacaacaactgaccaagag 364 Query: 371 cttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatgaaagg 430 ||||| || | |||||| | ||||||||||||| || || ||||| || |||||| | Sbjct: 365 cttcaacacttaaggaacagtctacctgatcaagttgtggtccagcgaattgatgaacgt 424 Query: 431 ctgtctgcccttgggcattgcatatcctgcaatgaccatgt 471 |||||||| ||||| ||||||| ||||||||||| |||| Sbjct: 425 ctgtctgctcttggaaattgcattgcctgcaatgactatgt 465
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 148 gtttgagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggt 207 |||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||| || Sbjct: 26575716 gtttgagaacaattgtgaagttggtgttttctccaagttgacaaatgcctattgtcttgt 26575775 Query: 208 tgcaattggaggatcagagaatttctacag 237 ||||||||||||||||||||| |||||||| Sbjct: 26575776 tgcaattggaggatcagagaacttctacag 26575805 Score = 127 bits (64), Expect = 4e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 367 agagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatga 426 ||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||| Sbjct: 26576786 agagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtattgatga 26576845 Query: 427 aaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcacacaccc 486 |||||| ||||| ||||| |||| || | |||||||||||||| ||||| |||||||| Sbjct: 26576846 aaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttacacaccc 26576905 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 242 tttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactaga 301 ||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| |||||| Sbjct: 26575904 tttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactaga 26575963 Query: 302 ataattggccgcctctgtgt 321 |||||||| || |||||||| Sbjct: 26575964 ataattggtcgtctctgtgt 26575983 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 323 ggaaacaagaatggacttctcttgccacacacaaccactgatcaag 368 |||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 26576072 ggaaacaagaatggacttctcttgcctcacactaccaccgatcaag 26576117 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 121 ggaatcgaccatggcgacccgta 143 ||||||||||||||||||||||| Sbjct: 26575162 ggaatcgaccatggcgacccgta 26575184
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 148 gtttgagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggt 207 |||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||| || Sbjct: 120987 gtttgagaacaattgtgaagttggtgttttctccaagttgacaaatgcctattgtcttgt 121046 Query: 208 tgcaattggaggatcagagaatttctacag 237 ||||||||||||||||||||| |||||||| Sbjct: 121047 tgcaattggaggatcagagaacttctacag 121076 Score = 127 bits (64), Expect = 4e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 367 agagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatga 426 ||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||| Sbjct: 122057 agagcttcagcatctgaggaactgcttgcctgatcaagtggttgttcagcgtattgatga 122116 Query: 427 aaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcacacaccc 486 |||||| ||||| ||||| |||| || | |||||||||||||| ||||| |||||||| Sbjct: 122117 aaggctatctgcgcttggcaattgtgtagcttgcaatgaccatgtcgcgcttacacaccc 122176 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 242 tttgagtctgagcttgcagatgtcattcctgtggtcaagacctctatcggtggcactaga 301 ||||| |||||||| |||||||| |||||||| ||||||||||| || ||||| |||||| Sbjct: 121175 tttgaatctgagctcgcagatgttattcctgttgtcaagacctccataggtggtactaga 121234 Query: 302 ataattggccgcctctgtgt 321 |||||||| || |||||||| Sbjct: 121235 ataattggtcgtctctgtgt 121254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 323 ggaaacaagaatggacttctcttgccacacacaaccactgatcaag 368 |||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 121343 ggaaacaagaatggacttctcttgcctcacactaccaccgatcaag 121388 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 121 ggaatcgaccatggcgacccgta 143 ||||||||||||||||||||||| Sbjct: 120433 ggaatcgaccatggcgacccgta 120455
>gb|BT014333.1| Lycopersicon esculentum clone 133606F, mRNA sequence Length = 1071 Score = 87.7 bits (44), Expect = 3e-14 Identities = 182/228 (79%) Strand = Plus / Plus Query: 161 tgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgcaattggagga 220 |||||| |||| |||||||| ||||| || ||||| || || |||| || ||||| || Sbjct: 149 tgtgaaattggagttttctcaaagctgaccaatgcatattgcttggtagctattgggggt 208 Query: 221 tcagagaatttctacagtacatttgagtctgagcttgcagatgtcattcctgtggtcaag 280 || || || |||||||| ||||||||||||||||| ||| | || || ||| |||| Sbjct: 209 tctgaaaacttctacagcacatttgagtctgagctatcaggcattatcccagtgatcaaa 268 Query: 281 acctctatcggtggcactagaataattggccgcctctgtgttggaaacaagaatggactt 340 |||||||| || || || || |||||||| | ||||| | ||||||||| ||||| ||| Sbjct: 269 acctctattggaggaacaaggataattggaagactctgcgctggaaacaaaaatggtctt 328 Query: 341 ctcttgccacacacaaccactgatcaagagcttcagcatctgaggaac 388 |||||||| ||||| || || |||||||| |||||||| |||||||| Sbjct: 329 ctcttgcctcacactactacagatcaagaacttcagcacttgaggaac 376
>emb|AJ009737.1|BVU9737 Beta vulgaris mRNA for eukaryotic translation initiation factor 6, partial Length = 678 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 149 tttgagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggtt 208 |||||||| || ||||||||||| |||||||| ||| | || ||||| || ||| |||| Sbjct: 118 tttgagaataattgtgaagttggggttttctctaagttgaccaatgcgtattgtttggtc 177 Query: 209 gcaattggaggatcagagaatttctacagtacatttgagtctga 252 |||||||| || || |||||||||||||||||||||||| |||| Sbjct: 178 gcaattggtgggtcggagaatttctacagtacatttgagactga 221
>dbj|AB236812.1| Trifolium pratense RNA for putative eukaryotic translation initiation factor 6, complete cds, clone: C213 Length = 1003 Score = 87.7 bits (44), Expect = 3e-14 Identities = 254/324 (78%) Strand = Plus / Plus Query: 161 tgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgcaattggagga 220 ||||||||||| || ||||| || || || ||||| || ||| ||||||||||||| || Sbjct: 87 tgtgaagttggagtcttctcaaaactaaccaatgcttattgtttggttgcaattggtggt 146 Query: 221 tcagagaatttctacagtacatttgagtctgagcttgcagatgtcattcctgtggtcaag 280 || || |||||||||||| ||||||| ||||| | ||||||| || ||||| | | Sbjct: 147 tctgaaaatttctacagtgcatttgaagctgagttatcagatgttatccctgtcattaga 206 Query: 281 acctctatcggtggcactagaataattggccgcctctgtgttggaaacaagaatggactt 340 ||||| || ||||||||| | || |||| || || ||| ||||||||||||| || ||| Sbjct: 207 acctccattggtggcactcgtattgttggtcgtctttgtattggaaacaagaacgggctt 266 Query: 341 ctcttgccacacacaaccactgatcaagagcttcagcatctgaggaactgcatacctgat 400 || ||||| || || ||||| || ||||| ||||| ||| ||| ||| | |||||||| Sbjct: 267 cttttgccccataccaccacagaccaagaacttcaacatttgaaaaacagtttacctgat 326 Query: 401 caagtggttgttcagcgcatcgatgaaaggctgtctgcccttgggcattgcatatcctgc 460 ||||| |||||||||||| || |||| | | ||||| || || |||| ||| | || Sbjct: 327 caagttcgtgttcagcgcattgaagaaaagttatctgctctgggtaattgtatagcatgt 386 Query: 461 aatgaccatgttgcgctcacacac 484 ||||||||||| || ||||||||| Sbjct: 387 aatgaccatgtggccctcacacac 410
>dbj|AK103139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G02, full insert sequence Length = 1162 Score = 65.9 bits (33), Expect = 1e-07 Identities = 129/161 (80%) Strand = Plus / Plus Query: 326 aacaagaatggacttctcttgccacacacaaccactgatcaagagcttcagcatctgagg 385 |||||||| || || ||| |||| || || ||||| || |||||||| |||||||||| | Sbjct: 330 aacaagaacggcctcctcctgccgcataccaccacagaccaagagctccagcatctgaag 389 Query: 386 aactgcatacctgatcaagtggttgttcagcgcatcgatgaaaggctgtctgcccttggg 445 ||| || | |||||||| ||||| || ||||||||||| || | || || ||||| || Sbjct: 390 aacagcctgcctgatcaggtggtcgtccagcgcatcgaggagcgcctctccgccctgggc 449 Query: 446 cattgcatatcctgcaatgaccatgttgcgctcacacaccc 486 ||||| | ||||||| |||||||| || ||||||||||| Sbjct: 450 aattgcgttgcctgcaacgaccatgtcgccctcacacaccc 490
>gb|BC024442.1| Mus musculus integrin beta 4 binding protein, mRNA (cDNA clone MGC:37280 IMAGE:4973875), complete cds Length = 1263 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 242 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 301 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 302 atcggaggctcagagaacttctacagt 328
>gb|BC015274.1| Mus musculus integrin beta 4 binding protein, mRNA (cDNA clone MGC:18715 IMAGE:4219358), complete cds Length = 1526 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 514 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 573 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 574 atcggaggctcagagaacttctacagt 600
>ref|NM_010579.1| Mus musculus integrin beta 4 binding protein (Itgb4bp), mRNA Length = 1526 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 514 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 573 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 574 atcggaggctcagagaacttctacagt 600
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 148 gtttgagaacaactgtgaagttggtgttttctccaagctcacaaatgccta 198 ||||||||||||||| ||||||||||| || ||||| ||||| |||||||| Sbjct: 22774 gtttgagaacaactgcgaagttggtgtcttttccaaactcactaatgccta 22824 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 393 tacctgatcaagtggttgttcagcgcatcgatgaaaggctgtctgcccttgggcattgca 452 ||||||||||||| || || ||||| || |||||| | |||||||| ||||| |||||| Sbjct: 23586 tacctgatcaagttgtggtccagcgaattgatgaacgtctgtctgctcttggaaattgca 23645 Query: 453 tatcctgcaatgaccatgt 471 | ||||||||||| |||| Sbjct: 23646 ttgcctgcaatgactatgt 23664
>dbj|AK168257.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730073F17 product:integrin beta 4 binding protein, full insert sequence Length = 1269 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 289 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 348 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 349 atcggaggctcagagaacttctacagt 375
>dbj|AK088707.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430024C20 product:integrin beta 4 binding protein, full insert sequence Length = 1257 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 277 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 336 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 337 atcggaggctcagagaacttctacagt 363
>gb|AF047046.1|AF047046 Mus musculus translation initiation factor eIF6 mRNA, complete cds Length = 1257 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 253 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 312 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 313 atcggaggctcagagaacttctacagt 339
>ref|NM_188140.1| Oryza sativa (japonica cultivar-group), Ozsa8572 predicted mRNA Length = 711 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 326 aacaagaatggacttctcttgccacacacaaccactgatcaagagcttcagcatctgagg 385 |||||||| || || ||| |||| || || ||||| || |||||||| |||||||||| | Sbjct: 196 aacaagaacggcctcctcctgccgcataccaccacagaccaagagctccagcatctgaag 255 Query: 386 aactgcatacctgatcaagtggttgttcagcgcatcga 423 ||| || | |||||||| ||||| || ||||||||||| Sbjct: 256 aacagcctgcctgatcaggtggtcgtccagcgcatcga 293
>dbj|AK156874.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830104F12 product:unclassifiable, full insert sequence Length = 2735 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 270 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 211 Query: 212 attggaggatcagagaatttctacag 237 || ||||| |||||||| |||||||| Sbjct: 210 atcggaggctcagagaacttctacag 185
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 367 agagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatga 426 |||||| |||||||||| |||| || | |||||||| ||||| || ||||||||||| || Sbjct: 9967178 agagctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgagga 9967119 Query: 427 aaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcacacaccc 486 | || || ||||| || ||||| | ||||||| |||||||| || ||||||||||| Sbjct: 9967118 gcgcctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacaccc 9967059
>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 367 agagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatga 426 |||||| |||||||||| |||| || | |||||||| ||||| || ||||||||||| || Sbjct: 47460 agagctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgagga 47401 Query: 427 aaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcacacaccc 486 | || || ||||| || ||||| | ||||||| |||||||| || ||||||||||| Sbjct: 47400 gcgcctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacaccc 47341
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 367 agagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatga 426 |||||| |||||||||| |||| || | |||||||| ||||| || ||||||||||| || Sbjct: 102944 agagctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgagga 102885 Query: 427 aaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcacacaccc 486 | || || ||||| || ||||| | ||||||| |||||||| || ||||||||||| Sbjct: 102884 gcgcctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacaccc 102825
>dbj|AK114785.1| Ciona intestinalis cDNA, clone:cieg017c20, full insert sequence Length = 1302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 179 tccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 ||||| || |||||| ||||||||| ||||||||||| || || || |||||||||||| Sbjct: 124 tccaaactgacaaatcgctactgtcttgttgcaattggcggttccgaaaatttctacagt 183 Query: 239 acatttgagtctgagcttgcagatgtcattcc 270 ||||| || |||||||| ||||| ||||| Sbjct: 184 gtttttgaatcggagcttgctgatgtaattcc 215
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 367 agagcttcagcatctgaggaactgcatacctgatcaagtggttgttcagcgcatcgatga 426 |||||| |||||||||| |||| || | |||||||| ||||| || ||||||||||| || Sbjct: 61671 agagctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgagga 61612 Query: 427 aaggctgtctgcccttgggcattgcatatcctgcaatgaccatgttgcgctcacacaccc 486 | || || ||||| || ||||| | ||||||| |||||||| || ||||||||||| Sbjct: 61611 gcgcctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacaccc 61552
>ref|XM_514603.1| PREDICTED: Pan troglodytes similar to Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog) (OK/SW-cl.27) (LOC458200), mRNA Length = 853 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 66 ccaagctcaccaacacctactgtctggtggcgatcggaggctcagagaacttctacagt 124
>gb|BT019757.1| Synthetic construct Homo sapiens integrin beta 4 binding protein mRNA, partial cds Length = 738 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 50 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 108
>gb|BC001119.2| Homo sapiens integrin beta 4 binding protein, transcript variant 1, mRNA (cDNA clone MGC:1959 IMAGE:2989973), complete cds Length = 1109 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 119 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 177
>gb|BC019305.1| Homo sapiens integrin beta 4 binding protein, transcript variant 1, mRNA (cDNA clone MGC:4200 IMAGE:2823211), complete cds Length = 1060 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 79 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 137
>ref|NM_181467.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 5, mRNA Length = 938 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 121 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 179
>ref|NM_181469.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 3, mRNA Length = 1083 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 266 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 324
>ref|NM_181468.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 2, mRNA Length = 1259 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 266 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 324
>ref|NM_002212.2| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 1, mRNA Length = 1114 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 121 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 179
>gb|BC014403.1| Homo sapiens cDNA clone IMAGE:3507239, partial cds Length = 3579 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 2744 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 2686
>ref|XM_965019.1| PREDICTED: Tribolium castaneum similar to integrin beta 4 binding protein (LOC658655), mRNA Length = 928 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 197 tactgtctggttgcaattggaggatcagagaatttctacagtacatttgag 247 |||||| ||||||||||||| || || || ||||||||||| ||||||||| Sbjct: 117 tactgtttggttgcaattggcgggtctgaaaatttctacagcacatttgag 167
>emb|Y11435.1|HSB4INTIN H.sapiens mRNA for b4 integrin interactor Length = 1108 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 88 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 146
>emb|CR619745.1| full-length cDNA clone CS0DH006YN03 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1045 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 84 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 142
>emb|CR608963.1| full-length cDNA clone CS0DI034YJ11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1052 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 88 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 146
>emb|CR607452.1| full-length cDNA clone CS0DI014YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1043 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 95 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 153
>emb|CR602132.1| full-length cDNA clone CS0DB008YD21 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1024 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 105 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 163
>emb|CR599682.1| full-length cDNA clone CS0DF025YH05 of Fetal brain of Homo sapiens (human) Length = 1223 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 274 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 332
>emb|CR598892.1| full-length cDNA clone CS0DL005YE18 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1057 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 81 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 139
>emb|CR592531.1| full-length cDNA clone CS0DL011YB12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1023 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 89 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 147
>dbj|AK134364.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030445C18 product:integrin beta 4 binding protein, full insert sequence Length = 1258 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 281 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 340 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 341 atcggaggctcagagaacttcta 363
>dbj|AK151089.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022N06 product:integrin beta 4 binding protein, full insert sequence Length = 1269 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 289 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 348 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 349 atcggaggctcagagaacttcta 371
>dbj|AK150931.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018G20 product:integrin beta 4 binding protein, full insert sequence Length = 1269 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 289 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 348 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 349 atcggaggctcagagaacttcta 371
>dbj|AK152093.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830047I20 product:integrin beta 4 binding protein, full insert sequence Length = 1253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 273 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 332 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 333 atcggaggctcagagaacttcta 355
>dbj|AK150720.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830014A06 product:integrin beta 4 binding protein, full insert sequence Length = 1267 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 287 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 346 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 347 atcggaggctcagagaacttcta 369
>dbj|AK152832.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830087B02 product:integrin beta 4 binding protein, full insert sequence Length = 1253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 273 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 332 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 333 atcggaggctcagagaacttcta 355
>dbj|AK151644.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032J08 product:integrin beta 4 binding protein, full insert sequence Length = 1268 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 288 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 347 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 348 atcggaggctcagagaacttcta 370
>dbj|AK151559.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031L18 product:integrin beta 4 binding protein, full insert sequence Length = 1248 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 268 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 327 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 328 atcggaggctcagagaacttcta 350
>dbj|AK159157.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420005M24 product:integrin beta 4 binding protein, full insert sequence Length = 1253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 273 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 332 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 333 atcggaggctcagagaacttcta 355
>dbj|AK150400.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006L18 product:integrin beta 4 binding protein, full insert sequence Length = 1268 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 288 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 347 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 348 atcggaggctcagagaacttcta 370
>dbj|AK167422.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530012M21 product:integrin beta 4 binding protein, full insert sequence Length = 1248 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 268 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 327 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 328 atcggaggctcagagaacttcta 350
>emb|CR456764.1| Homo sapiens full open reading frame cDNA clone RZPDo834D044D for gene ITGB4BP, integrin beta 4 binding protein; complete cds, incl. stopcodon Length = 738 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 50 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 108
>dbj|AK165946.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730022I23 product:integrin beta 4 binding protein, full insert sequence Length = 1052 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 72 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 131 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 132 atcggaggctcagagaacttcta 154
>dbj|AK151102.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025C18 product:integrin beta 4 binding protein, full insert sequence Length = 1252 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 272 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 331 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 332 atcggaggctcagagaacttcta 354
>dbj|AK003447.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110004P11 product:integrin beta 4 binding protein, full insert sequence Length = 1249 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 270 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 329 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 330 atcggaggctcagagaacttcta 352
>dbj|AK012218.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700008E01 product:integrin beta 4 binding protein, full insert sequence Length = 1261 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 280 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 339 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 340 atcggaggctcagagaacttcta 362
>dbj|AK005384.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500041G22 product:integrin beta 4 binding protein, full insert sequence Length = 1298 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 281 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 340 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 341 atcggaggctcagagaacttcta 363
>dbj|AK018313.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530402L05 product:integrin beta 4 binding protein, full insert sequence Length = 1383 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 253 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 312 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 313 atcggaggctcagagaacttcta 335
>dbj|AK007594.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810023N17 product:integrin beta 4 binding protein, full insert sequence Length = 1262 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 281 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 340 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 341 atcggaggctcagagaacttcta 363
>gb|BC095465.1| Homo sapiens cDNA clone IMAGE:30559307 Length = 927 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 95 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 153
>gb|AF108462.2| Mus musculus b4 integrin interactor homolog mRNA, complete cds Length = 1304 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 299 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 358 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 359 atcggaggctcagagaacttcta 381
>gb|BC039466.1| Homo sapiens, Similar to integrin beta 4 binding protein, clone IMAGE:3902946, mRNA Length = 1401 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 558 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 616
>gb|AF047433.1| Homo sapiens b(2)gcn homolog mRNA, complete cds Length = 1112 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 120 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 178
>gb|AY890841.1| Synthetic construct Homo sapiens clone FLH020433.01L integrin beta 4 binding protein (ITGB4BP) mRNA, partial cds Length = 738 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 50 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 108
>gb|BC011845.2| Homo sapiens integrin beta 4 binding protein, transcript variant 1, mRNA (cDNA clone MGC:20289 IMAGE:4120463), complete cds Length = 1087 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 97 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 155
>emb|AL845445.14| Mouse DNA sequence from clone RP23-380B10 on chromosome 2, complete sequence Length = 126636 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 1760 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 1701 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 1700 atcggaggctcagagaacttcta 1678
>gb|AF022229.1|AF022229 Homo sapiens translation initiation factor 6 (eIF6) mRNA, complete cds Length = 1096 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 135 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 193
>emb|BX004872.6| Mouse DNA sequence from clone RP23-464N1 on chromosome 2, complete sequence Length = 3994 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 3754 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 3695 Query: 212 attggaggatcagagaatttcta 234 || ||||| |||||||| ||||| Sbjct: 3694 atcggaggctcagagaacttcta 3672
>dbj|AB062289.1| Homo sapiens OK/SW-cl.27 mRNA for integrin beta 4 binding protein, complete cds Length = 1068 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacagt 238 |||||||||| || ||||||||||||| || || ||||| |||||||| ||||||||| Sbjct: 79 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacagt 137
>ref|NM_181466.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 4, mRNA Length = 1057 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacag 237 |||||||||| || ||||||||||||| || || ||||| |||||||| |||||||| Sbjct: 121 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacag 178
>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12 Contains the C20orf127 locus for a metallothionein protein pseudogene, the MMP24 gene for matrix metalloproteinase 24 (membrane-inserted), a novel gene, the ITGB4BP gene for integrin beta 4 binding protein, the C20orf120 gene for chromosome 20 open reading frame 120, the C20orf128 gene for chromosome 20 open reading frame 128, the 3' end of the C20orf44 gene for chromosome 20 open reading frame 44 and three CpG islands, complete sequence Length = 150481 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacag 237 |||||||||| || ||||||||||||| || || ||||| |||||||| |||||||| Sbjct: 93911 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacag 93854
>dbj|AK152416.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830069K17 product:integrin beta 4 binding protein, full insert sequence Length = 1275 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 295 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 354 Query: 212 attggaggatcagagaatttct 233 || ||||| |||||||| |||| Sbjct: 355 atcggaggctcagagaacttct 376
>dbj|AK152215.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830055D22 product:integrin beta 4 binding protein, full insert sequence Length = 1253 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 273 gagaacaactgtgaggtcggttgttttgccaaactcacaaacgcctactgcctggtggcc 332 Query: 212 attggaggatcagagaatttct 233 || ||||| |||||||| |||| Sbjct: 333 atcggaggctcagagaacttct 354
>gb|AF289540.1|AF289540S1 Homo sapiens p27BBP protein (ITGB4BP) gene, exons 2 and 3 Length = 312 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacag 237 |||||||||| || ||||||||||||| || || ||||| |||||||| |||||||| Sbjct: 50 ccaagctcaccaacacctactgtctggtagcgatcggaggctcagagaacttctacag 107
>gb|AC163761.3| Pan troglodytes BAC clone CH251-214O19 from chromosome unknown, complete sequence Length = 193316 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 180 ccaagctcacaaatgcctactgtctggttgcaattggaggatcagagaatttctacag 237 |||||||||| || ||||||||||||| || || ||||| |||||||| |||||||| Sbjct: 70010 ccaagctcaccaacacctactgtctggtggcgatcggaggctcagagaacttctacag 69953
>gb|AY441170.1| Armigeres subalbatus ASAP ID: 41865 translation initiation factor mRNA sequence Length = 745 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 182 aagctcacaaatgcctactgtctggttgcaattggaggatc 222 ||||| |||||| |||||||| ||||||||||||| ||||| Sbjct: 181 aagctgacaaattcctactgtttggttgcaattggtggatc 221
>gb|AC145766.1| Cicer arietinum strain FLIP84-92C clone gl1-4m10, complete sequence Length = 10565 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 258 cagatgtcattcctgtggtcaagacctctatcggtggcact 298 ||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 9761 cagatgttatccctgtggtcaaaacctccatcggtggcact 9801 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 191 aatgcctactgtctggttgcaattggaggatcagagaatttctacag 237 |||||||| ||| ||||||| |||||||| || || ||||||||||| Sbjct: 9601 aatgcctattgtttggttgccattggaggttctgaaaatttctacag 9647 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 323 ggaaacaagaatggacttctcttgcc 348 |||||||||||||| ||||||||||| Sbjct: 9902 ggaaacaagaatgggcttctcttgcc 9927
>ref|XM_392115.2| PREDICTED: Apis mellifera similar to GA14578-PA (LOC408573), mRNA Length = 1205 Score = 48.1 bits (24), Expect = 0.027 Identities = 63/76 (82%) Strand = Plus / Plus Query: 163 tgaagttggtgttttctccaagctcacaaatgcctactgtctggttgcaattggaggatc 222 ||||||||| |||||||||||| | |||||| | || || || || |||||||| || || Sbjct: 182 tgaagttggagttttctccaagttgacaaattcttattgcctcgtagcaattggtggttc 241 Query: 223 agagaatttctacagt 238 |||||||| |||||| Sbjct: 242 cgagaatttttacagt 257
>gb|BC105764.1| Rattus norvegicus integrin beta 4 binding protein, mRNA (cDNA clone MGC:124669 IMAGE:7929717), complete cds Length = 1254 Score = 46.1 bits (23), Expect = 0.11 Identities = 71/87 (81%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| ||||| || ||||||| ||||| || Sbjct: 247 gagaacaactgtgaggtcggttgttttgccaaactcactaacacctactgcctggtggcc 306 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 307 atcggagggtcagagaacttctacagt 333
>ref|NM_001037352.1| Rattus norvegicus integrin beta 4 binding protein (Itgb4bp), mRNA Length = 1254 Score = 46.1 bits (23), Expect = 0.11 Identities = 71/87 (81%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggtgttttctccaagctcacaaatgcctactgtctggttgca 211 |||||||||||||| || ||| ||| |||| ||||| || ||||||| ||||| || Sbjct: 247 gagaacaactgtgaggtcggttgttttgccaaactcactaacacctactgcctggtggcc 306 Query: 212 attggaggatcagagaatttctacagt 238 || ||||| |||||||| ||||||||| Sbjct: 307 atcggagggtcagagaacttctacagt 333
>ref|XM_504489.1| Yarrowia lipolytica CLIB122, YALI0E27940g predicted mRNA Length = 741 Score = 44.1 bits (22), Expect = 0.42 Identities = 58/70 (82%) Strand = Plus / Plus Query: 168 ttggtgttttctccaagctcacaaatgcctactgtctggttgcaattggaggatcagaga 227 ||||||| || ||||||||||| || ||||||||||||| || |||| || || |||| Sbjct: 38 ttggtgtcttttccaagctcaccaactcctactgtctggtggctgttggcggctccgaga 97 Query: 228 atttctacag 237 | |||||||| Sbjct: 98 acttctacag 107
>emb|CT032309.1| Platynereis dumerilii EST IB0AAA40DH10EM1 Length = 929 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 gaataattggccgcctctgtgttggaaaca 329 ||||||||||||| ||||| |||||||||| Sbjct: 316 gaataattggccgtctctgcgttggaaaca 345
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 44.1 bits (22), Expect = 0.42 Identities = 58/70 (82%) Strand = Plus / Minus Query: 168 ttggtgttttctccaagctcacaaatgcctactgtctggttgcaattggaggatcagaga 227 ||||||| || ||||||||||| || ||||||||||||| || |||| || || |||| Sbjct: 3308184 ttggtgtcttttccaagctcaccaactcctactgtctggtggctgttggcggctccgaga 3308125 Query: 228 atttctacag 237 | |||||||| Sbjct: 3308124 acttctacag 3308115
>gb|AC161212.9| Mus musculus chromosome 3, clone RP24-267M11, complete sequence Length = 147921 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 gagaacaactgtgaagttggt 172 ||||||||||||||||||||| Sbjct: 86471 gagaacaactgtgaagttggt 86491
>ref|XM_426073.1| PREDICTED: Gallus gallus similar to A-kinase anchor protein 7 isoform gamma (Protein kinase A anchoring protein 7 isoform gamma) (A-kinase anchoring protein 18) (LOC428519), mRNA Length = 2649 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 cgcatccctcccctcccggtg 77 ||||||||||||||||||||| Sbjct: 2423 cgcatccctcccctcccggtg 2403 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 cgcatccctcccctcccggtg 77 ||||||||||||||||||||| Sbjct: 2148 cgcatccctcccctcccggtg 2128
>ref|XM_567447.1| Cryptococcus neoformans var. neoformans JEC21 eukaryotic translation initiation factor 6 (eif-6) (CNJ00650) partial mRNA Length = 961 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 168 ttggtgttttctccaagctcacaaatgcctactgtct 204 ||||||| |||||||||||||| || |||||||||| Sbjct: 83 ttggtgtcttctccaagctcaccaactcctactgtct 119
>gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chromosome 16, complete sequence Length = 158303 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 112990 cctgatcaagtggttgttcag 112970
>ref|XM_625897.1| Cryptosporidium parvum Iowa II putative eIF6, translation initiation factor 6 (cgd4_3130), partial mRNA Length = 759 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 actgatcaagagcttcagcatctgaggaa 387 ||||||||||||||||| || |||||||| Sbjct: 229 actgatcaagagcttcaacacctgaggaa 257
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccaaaccctagctcccaccgc 47 ||||||||||||||||||||| Sbjct: 79556 ccaaaccctagctcccaccgc 79576
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccaaaccctagctcccaccgc 47 ||||||||||||||||||||| Sbjct: 21764873 ccaaaccctagctcccaccgc 21764893
>gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, complete sequence Length = 172705 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 153030 cctgatcaagtggttgttcag 153050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 146993 cctgatcaagtggttgttcag 147013
>gb|AC018892.8| Homo sapiens BAC clone RP11-499E14 from 2, complete sequence Length = 191055 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 128204 cctgatcaagtggttgttcag 128224 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 122197 cctgatcaagtggttgttcag 122217
>gb|AC004902.2|AC004902 Homo sapiens PAC clone RP5-823F17 from 7q36, complete sequence Length = 104154 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 75462 cctgatcaagtggttgttcag 75482 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 69453 cctgatcaagtggttgttcag 69473
>gb|AC160020.1| Homo sapiens BAC clone RP11-540L21 from 2, complete sequence Length = 202084 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 71675 cctgatcaagtggttgttcag 71695 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 65667 cctgatcaagtggttgttcag 65687
>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence Length = 180019 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cctgatcaagtggttgttcag 415 ||||||||||||||||||||| Sbjct: 90926 cctgatcaagtggttgttcag 90946
>dbj|AK072487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131J20, full insert sequence Length = 1418 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccaaaccctagctcccaccgc 47 ||||||||||||||||||||| Sbjct: 87 ccaaaccctagctcccaccgc 107
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccaaaccctagctcccaccgc 47 ||||||||||||||||||||| Sbjct: 21776536 ccaaaccctagctcccaccgc 21776556
>gb|AC139673.9| Mus musculus chromosome 1, clone RP23-280I2, complete sequence Length = 263505 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ggtgttttctccaagctcacaaat 193 |||||||||||||| ||||||||| Sbjct: 189339 ggtgttttctccaaactcacaaat 189362
>gb|AC126264.3| Mus musculus BAC clone RP23-376F13 from chromosome 14, complete sequence Length = 169909 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 cttcagcatctgaggaactg 390 |||||||||||||||||||| Sbjct: 64074 cttcagcatctgaggaactg 64055
>gb|AC091316.2| Sus scrofa clone RP44-479G12, complete sequence Length = 155724 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gagcttgcagatgtcattcctgtg 274 |||| ||||||||||||||||||| Sbjct: 104300 gagcctgcagatgtcattcctgtg 104277
>gb|AC095558.10| Rattus norvegicus 18 BAC CH230-8D7 (Children's Hospital Oakland Research Institute) complete sequence Length = 226956 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gtgagtgcttgttgctgcag 94 |||||||||||||||||||| Sbjct: 196433 gtgagtgcttgttgctgcag 196414
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete sequence Length = 235135 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 146011 gcattgcatatcctgcaatg 146030
>gb|BC011464.1| Mus musculus hydroxysteroid (17-beta) dehydrogenase 7, mRNA (cDNA clone MGC:11432 IMAGE:3966186), complete cds Length = 4528 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggtgttttctccaagctcacaaat 193 |||||||||||||| ||||||||| Sbjct: 2517 ggtgttttctccaaactcacaaat 2494
>emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in linkage group 13, complete sequence Length = 242350 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 27853 gcattgcatatcctgcaatg 27872
>emb|CR751563.13| Zebrafish DNA sequence from clone CH211-203C10 in linkage group 13, complete sequence Length = 72720 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 46324 gcattgcatatcctgcaatg 46305
>emb|BX511084.9| Zebrafish DNA sequence from clone DKEY-265C15 in linkage group 13, complete sequence Length = 156524 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 5402 gcattgcatatcctgcaatg 5383
>emb|BX510349.5| Zebrafish DNA sequence from clone CH211-69E13 in linkage group 7, complete sequence Length = 152064 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cattgcatatcctgcaatga 465 |||||||||||||||||||| Sbjct: 103305 cattgcatatcctgcaatga 103324
>emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in linkage group 5, complete sequence Length = 188618 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ttgagaacaactgtgaagtt 169 |||||||||||||||||||| Sbjct: 170384 ttgagaacaactgtgaagtt 170365
>emb|CR391933.10| Zebrafish DNA sequence from clone DKEY-208M12 in linkage group 22, complete sequence Length = 80745 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tgttttctccaagctcacaaatgc 195 |||||||||||||| ||||||||| Sbjct: 24003 tgttttctccaagcgcacaaatgc 23980
>emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in linkage group 14, complete sequence Length = 227326 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 207214 gcattgcatatcctgcaatg 207195
>emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 in linkage group 9, complete sequence Length = 174884 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 44647 gcattgcatatcctgcaatg 44666
>emb|BX323465.7| Zebrafish DNA sequence from clone DKEYP-9C6 in linkage group 14, complete sequence Length = 174182 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 151401 gcattgcatatcctgcaatg 151382
>ref|NM_010476.3| Mus musculus hydroxysteroid (17-beta) dehydrogenase 7 (Hsd17b7), mRNA Length = 4574 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggtgttttctccaagctcacaaat 193 |||||||||||||| ||||||||| Sbjct: 2552 ggtgttttctccaaactcacaaat 2529
>dbj|AK050211.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730027E05 product:hydroxysteroid (17-beta) dehydrogenase 7, full insert sequence Length = 4198 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggtgttttctccaagctcacaaat 193 |||||||||||||| ||||||||| Sbjct: 2509 ggtgttttctccaaactcacaaat 2486
>dbj|AK028380.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830431B16 product:hydroxysteroid 17-beta dehydrogenase 7, full insert sequence Length = 4019 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggtgttttctccaagctcacaaat 193 |||||||||||||| ||||||||| Sbjct: 2508 ggtgttttctccaaactcacaaat 2485
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ctcccaaaccctagctcccaccgc 47 ||||||||||||||||||| |||| Sbjct: 6978666 ctcccaaaccctagctccccccgc 6978689
>gb|AC013480.12| Homo sapiens BAC clone RP11-564O16 from 2, complete sequence Length = 128466 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tgtctgcccttgggcattgc 451 |||||||||||||||||||| Sbjct: 64992 tgtctgcccttgggcattgc 64973
>gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, complete sequence Length = 163408 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gcaattggaggatcagagaa 228 |||||||||||||||||||| Sbjct: 9920 gcaattggaggatcagagaa 9901
>gb|AC120024.22| Homo sapiens chromosome 17, clone CTD-2526A2, complete sequence Length = 136002 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccaccgcatccctcccctcc 72 |||||||||||||||||||| Sbjct: 53281 ccaccgcatccctcccctcc 53300
>gb|AC009803.17| Homo sapiens 12 BAC RP11-1028N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186044 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 atttgagtctgagcttgcag 260 |||||||||||||||||||| Sbjct: 146226 atttgagtctgagcttgcag 146207
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ctcccaaaccctagctcccaccgc 47 ||||||||||||||||||| |||| Sbjct: 72288 ctcccaaaccctagctccccccgc 72311
>emb|BX571879.8| Zebrafish DNA sequence from clone DKEY-238C7 in linkage group 18, complete sequence Length = 252198 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 51983 gcattgcatatcctgcaatg 52002
>emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in linkage group 18, complete sequence Length = 263615 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 10607 gcattgcatatcctgcaatg 10626
>emb|BX901977.10| Zebrafish DNA sequence from clone DKEY-1H1 in linkage group 22, complete sequence Length = 86957 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tgttttctccaagctcacaaatgc 195 |||||||||||||| ||||||||| Sbjct: 50433 tgttttctccaagcgcacaaatgc 50410
>emb|BX470218.10| Zebrafish DNA sequence from clone DKEY-30C15 in linkage group 18, complete sequence Length = 197774 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcattgcatatcctgcaatg 464 |||||||||||||||||||| Sbjct: 80201 gcattgcatatcctgcaatg 80220
>emb|AJ291466.1|MMU291466 Mus musculus partial HSD17B7 gene for 17beta-hydroxysteroid dehydrogenase type 7, exon 9 Length = 4683 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggtgttttctccaagctcacaaat 193 |||||||||||||| ||||||||| Sbjct: 1738 ggtgttttctccaaactcacaaat 1715 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,847,746 Number of Sequences: 3902068 Number of extensions: 3847746 Number of successful extensions: 66992 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 66613 Number of HSP's gapped (non-prelim): 376 length of query: 486 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 464 effective length of database: 17,147,199,772 effective search space: 7956300694208 effective search space used: 7956300694208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
