ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NNP1_DROME (Q9VJZ7) NNP-1 protein homolog 31 2.5
2ZN690_HUMAN (Q8IWY8) Zinc finger protein 690 30 3.2
3DLG1_DROME (P31007) Discs large 1 tumor suppressor protein 29 7.2
4ZNF31_HUMAN (P17040) Zinc finger protein 31 (Zinc finger protein... 29 9.3
5YRO6_CAEEL (Q09423) Hypothetical protein R07G3.6 29 9.3
6K6PL_HUMAN (P17858) 6-phosphofructokinase, liver type (EC 2.7.1.... 29 9.3

>NNP1_DROME (Q9VJZ7) NNP-1 protein homolog|
          Length = 687

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = +3

Query: 174 QPWSHGDTMHLIDVYXDRWTKLRRGQLKAHQWEDVAAEVTHLCGGQR--KTGTQCRHKLE 347
           QP S G TMH +DV+ +   K   G++ A Q              QR  K   QCR ++ 
Sbjct: 188 QPKSRGMTMHYLDVFFEELAKAANGEITAAQVNMFLRPFVTYIATQRDAKLVAQCRTRV- 246

Query: 348 KLRKRYRTEAARPVTSLWPFFRRM 419
                Y+++  R  +  +  +++M
Sbjct: 247 LYHLMYQSDLGRQYSEKYNAWKQM 270



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>ZN690_HUMAN (Q8IWY8) Zinc finger protein 690|
          Length = 851

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
 Frame = +3

Query: 171 GQPWSHGDTMHLIDVYXDR--WTKLRRGQLKAHQWEDVAAEVTHLCGGQRKTGTQCRHKL 344
           G  W + +T  L+ +      +  LR     +  +  VA  +     G  +T  QCR K 
Sbjct: 244 GVHWGYEETRTLLAILSQTEFYEALRNCHRNSQVYGAVAERLREY--GFLRTLEQCRTKF 301

Query: 345 EKLRKRYRTEAARPVTSLWPFFRRMERL 428
           + L+K YR   +       PFF  ME L
Sbjct: 302 KGLQKSYRKVKSGHPPETCPFFEEMEAL 329



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>DLG1_DROME (P31007) Discs large 1 tumor suppressor protein|
          Length = 970

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 171 GQPWSHGDTMHLIDVYXDRWTKLRR 245
           G P+ HGD +H+ +   D W + RR
Sbjct: 643 GLPFKHGDILHVTNASDDEWWQARR 667



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>ZNF31_HUMAN (P17040) Zinc finger protein 31 (Zinc finger protein KOX29) (Zinc|
           finger and SCAN domain-containing protein 20) (Zinc
           finger protein 360)
          Length = 977

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
 Frame = +3

Query: 126 PRGIHAMEAARKSAPGQPWSHGDTMHLIDVYXDR--WTKLRRGQLKAHQWEDVAAEVTHL 299
           PR   A    +    G  W + +T   + +  +     KLR     +  +  +A  +  L
Sbjct: 402 PRIAGAPALFQSRIAGVHWGYEETKAFLAILSESPFSEKLRTCHQNSQVYRAIAERLCAL 461

Query: 300 CGGQRKTGTQCRHKLEKLRKRYRTEAARPVTSLWPFFRRMERLER 434
             G  +T  QCR++ + L + YR   +       PF+  ++ L R
Sbjct: 462 --GFLRTLEQCRYRFKNLLRSYRKAKSSHPPGTCPFYEELDSLMR 504



 Score = 28.9 bits (63), Expect = 9.3
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +3

Query: 171 GQPWSHGDTMHLIDVYXDR--WTKLRRGQLKAHQWEDVAAEVTHLCGGQRKTGTQCRHKL 344
           G  W + +T   + +  +     KLR        +  +A ++     G  +T  QCR+++
Sbjct: 257 GVHWGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAIAEQLR--ARGFLRTLEQCRYRV 314

Query: 345 EKLRKRYRTEAARPVTSLWPFFRRMERLER 434
           + L + YR   +       PF+  +E L R
Sbjct: 315 KNLLRNYRKAKSSHPPGTCPFYEELEALVR 344



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>YRO6_CAEEL (Q09423) Hypothetical protein R07G3.6|
          Length = 304

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +3

Query: 309 QRKTGTQCRHKLEKLRKRYRTEAARPVTSLWPFFRRMERLERGPVPTATNS 461
           Q K   + R + EK+RK           SLW  F+R++R    P  T T +
Sbjct: 52  QMKENQRARDQAEKIRKDREDHPLSTSRSLWEMFQRLQR----PTTTTTEA 98



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>K6PL_HUMAN (P17858) 6-phosphofructokinase, liver type (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase)
           (Phosphofructo-1-kinase isozyme B) (PFK-B)
          Length = 779

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 144 MEAARKSAPGQPWSHGDTMHLIDVYXDRWTKLRRGQLKAHQWEDVA 281
           M AA +SA     SHG T++++    D +  L +GQ++   W DVA
Sbjct: 413 MNAAVRSAVRTGISHGHTVYVVH---DGFEGLAKGQVQEVGWHDVA 455


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.131    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,273,827
Number of Sequences: 219361
Number of extensions: 542690
Number of successful extensions: 1782
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1782
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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