ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.025
2ref|XM_479031.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.025
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
4dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
5dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
6dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
7ref|XM_479036.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
8ref|XM_479032.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
9ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group... 46 0.10
10ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group... 46 0.10
11dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
12dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
13dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
14dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
15gb|AY112347.1| Zea mays CL32321_1 mRNA sequence 46 0.10
16emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 42 1.6
17gb|U00065.1| Caenorhabditis elegans cosmid D1044, complete sequence 40 6.2
18gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.2
19ref|NM_065783.3| Caenorhabditis elegans D1044.6 (D1044.6) mRNA, ... 40 6.2
20gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 6.2
21emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 6.2

>ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.112
           mRNA
          Length = 1006

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 286 agcctgaagtgccacaccccgtggtgccggag 317
           ||||||| ||||||||||| ||||||||||||
Sbjct: 583 agcctgaggtgccacaccctgtggtgccggag 614



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ccggagctgccaaagcccga 184
           ||||||||||||||||||||
Sbjct: 366 ccggagctgccaaagcccga 385



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 195 caccctgccatgcccgagctgccgaagcctgaactaccgc 234
           ||||| ||| |||| ||||| |||||||||||||| ||||
Sbjct: 267 caccccgccgtgccggagcttccgaagcctgaactgccgc 306



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>ref|XM_479031.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1005

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 286 agcctgaagtgccacaccccgtggtgccggag 317
           ||||||| ||||||||||| ||||||||||||
Sbjct: 580 agcctgaggtgccacaccctgtggtgccggag 611



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ccggagctgccaaagcccga 184
           ||||||||||||||||||||
Sbjct: 363 ccggagctgccaaagcccga 382



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 195 caccctgccatgcccgagctgccgaagcctgaactaccgc 234
           ||||| ||| |||| ||||| |||||||||||||| ||||
Sbjct: 264 caccccgccgtgccggagcttccgaagcctgaactgccgc 303



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 286      agcctgaagtgccacaccccgtggtgccggag 317
                ||||||| ||||||||||| ||||||||||||
Sbjct: 24416953 agcctgaggtgccacaccctgtggtgccggag 24416922



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 282      aaggagcctgaagtgccacaccccgtggtgccgga 316
                |||| ||||||| |||||||||||| |||||||||
Sbjct: 24428069 aaggtgcctgaactgccacaccccgaggtgccgga 24428035



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 189      ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
                ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 24419282 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 24419244



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 165      ccggagctgccaaagcccgaaatcccgccgcaccctgccatgcccgagctgccgaagc 222
                ||||||||||| |||| ||||   ||||||||||||| | |||| |||||||| ||||
Sbjct: 24419348 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 24419291



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 78       ctgctctcatgcagctccatgagcagtgcagc 109
                ||||||||||| |||||||| ||||| |||||
Sbjct: 24428237 ctgctctcatggagctccatcagcagcgcagc 24428206



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 165      ccggagctgccaaagcccga 184
                ||||||||||||||||||||
Sbjct: 24428123 ccggagctgccaaagcccga 24428104



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 384      caccctgctatgcccgagctcccgaagcctga 415
                ||||||||  |||| |||||||||||||||||
Sbjct: 24428009 caccctgcggtgccggagctcccgaagcctga 24427978



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 195      caccctgccatgcccgagctgccgaagcctgaactaccgc 234
                ||||| ||| |||| ||||| |||||||||||||| ||||
Sbjct: 24417269 caccccgccgtgccggagcttccgaagcctgaactgccgc 24417230



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 165      ccggagctgccaaagcccga 184
                ||||||||||||||||||||
Sbjct: 24417170 ccggagctgccaaagcccga 24417151



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>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 286   agcctgaagtgccacaccccgtggtgccggag 317
             ||||||| ||||||||||| ||||||||||||
Sbjct: 42820 agcctgaggtgccacaccctgtggtgccggag 42789



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 282   aaggagcctgaagtgccacaccccgtggtgccgga 316
             |||| ||||||| |||||||||||| |||||||||
Sbjct: 53936 aaggtgcctgaactgccacaccccgaggtgccgga 53902



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 189   ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
             ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 45149 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 45111



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 165   ccggagctgccaaagcccgaaatcccgccgcaccctgccatgcccgagctgccgaagc 222
             ||||||||||| |||| ||||   ||||||||||||| | |||| |||||||| ||||
Sbjct: 45215 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 45158



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 78    ctgctctcatgcagctccatgagcagtgcagc 109
             ||||||||||| |||||||| ||||| |||||
Sbjct: 54104 ctgctctcatggagctccatcagcagcgcagc 54073



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   ccggagctgccaaagcccga 184
             ||||||||||||||||||||
Sbjct: 53990 ccggagctgccaaagcccga 53971



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 384   caccctgctatgcccgagctcccgaagcctga 415
             ||||||||  |||| |||||||||||||||||
Sbjct: 53876 caccctgcggtgccggagctcccgaagcctga 53845



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 195   caccctgccatgcccgagctgccgaagcctgaactaccgc 234
             ||||| ||| |||| ||||| |||||||||||||| ||||
Sbjct: 43136 caccccgccgtgccggagcttccgaagcctgaactgccgc 43097



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   ccggagctgccaaagcccga 184
             ||||||||||||||||||||
Sbjct: 43037 ccggagctgccaaagcccga 43018



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>dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B01, full
           insert sequence
          Length = 1005

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 286 agcctgaagtgccacaccccgtggtgccggag 317
           ||||||| ||||||||||| ||||||||||||
Sbjct: 580 agcctgaggtgccacaccctgtggtgccggag 611



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ccggagctgccaaagcccga 184
           ||||||||||||||||||||
Sbjct: 363 ccggagctgccaaagcccga 382



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 195 caccctgccatgcccgagctgccgaagcctgaactaccgc 234
           ||||| ||| |||| ||||| |||||||||||||| ||||
Sbjct: 264 caccccgccgtgccggagcttccgaagcctgaactgccgc 303



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>dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162L16, full
           insert sequence
          Length = 1006

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 286 agcctgaagtgccacaccccgtggtgccggag 317
           ||||||| ||||||||||| ||||||||||||
Sbjct: 583 agcctgaggtgccacaccctgtggtgccggag 614



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ccggagctgccaaagcccga 184
           ||||||||||||||||||||
Sbjct: 366 ccggagctgccaaagcccga 385



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 195 caccctgccatgcccgagctgccgaagcctgaactaccgc 234
           ||||| ||| |||| ||||| |||||||||||||| ||||
Sbjct: 267 caccccgccgtgccggagcttccgaagcctgaactgccgc 306



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>ref|XM_479036.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 678

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 282 aaggagcctgaagtgccacaccccgtggtgccgga 316
           |||| ||||||| |||||||||||| |||||||||
Sbjct: 289 aaggtgcctgaactgccacaccccgaggtgccgga 323



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 384 caccctgctatgcccgagctcccgaagcctga 415
           ||||||||  |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ccggagctgccaaagcccga 184
           ||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 78  ctgctctcatgcagctccatgagcagtgcagc 109
           ||||||||||| |||||||| ||||| |||||
Sbjct: 121 ctgctctcatggagctccatcagcagcgcagc 152



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>ref|XM_479032.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 994

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 189 ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
           ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 719 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 757



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 165 ccggagctgccaaagcccgaaatcccgccgcaccctgccatgcccgagctgccgaagc 222
           ||||||||||| |||| ||||   ||||||||||||| | |||| |||||||| ||||
Sbjct: 653 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 710



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>ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
           mRNA
          Length = 1071

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 189 ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
           ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 718 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 756



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 165 ccggagctgccaaagcccgaaatcccgccgcaccctgccatgcccgagctgccgaagc 222
           ||||||||||| |||| ||||   ||||||||||||| | |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



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>ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
           mRNA
          Length = 1071

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 189 ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
           ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 718 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 756



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 165 ccggagctgccaaagcccgaaatcccgccgcaccctgccatgcccgagctgccgaagc 222
           ||||||||||| |||| ||||   ||||||||||||| | |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



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>dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G11, full
           insert sequence
          Length = 1071

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 189 ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
           ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 718 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 756



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 165 ccggagctgccaaagcccgaaatcccgccgcaccctgccatgcccgagctgccgaagc 222
           ||||||||||| |||| ||||   ||||||||||||| | |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



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>dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H12, full
           insert sequence
          Length = 1071

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 189 ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
           ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 718 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 756



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 165 ccggagctgccaaagcccgaaatcccgccgcaccctgccatgcccgagctgccgaagc 222
           ||||||||||| |||| ||||   ||||||||||||| | |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709



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>dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069L14, full
           insert sequence
          Length = 988

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 189 ccgccgcaccctgccatgcccgagctgccgaagcctgaa 227
           ||||||||||| | | |||| ||||||||||||||||||
Sbjct: 713 ccgccgcaccccgtcgtgccggagctgccgaagcctgaa 751



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>dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G06, full
           insert sequence
          Length = 678

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 282 aaggagcctgaagtgccacaccccgtggtgccgga 316
           |||| ||||||| |||||||||||| |||||||||
Sbjct: 289 aaggtgcctgaactgccacaccccgaggtgccgga 323



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 384 caccctgctatgcccgagctcccgaagcctga 415
           ||||||||  |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ccggagctgccaaagcccga 184
           ||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 78  ctgctctcatgcagctccatgagcagtgcagc 109
           ||||||||||| |||||||| ||||| |||||
Sbjct: 121 ctgctctcatggagctccatcagcagcgcagc 152



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>gb|AY112347.1| Zea mays CL32321_1 mRNA sequence
          Length = 636

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 55/65 (84%), Gaps = 3/65 (4%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccggagctgccaaagcccgaaatcccgccgcaccctgc---catgcccgagctgccgaag 221
           ||||||||||| ||||||||  | | ||||||||| ||   | |||||||||||||||||
Sbjct: 596 ccggagctgcccaagcccgagctgcagccgcacccggcggccgtgcccgagctgccgaag 537

                
Query: 222 cctga 226
           |||||
Sbjct: 536 cctga 532



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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 156   ccgatcatcccggagctgccaaagc 180
             |||||||||||||||||||| ||||
Sbjct: 98966 ccgatcatcccggagctgccgaagc 98942



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>gb|U00065.1| Caenorhabditis elegans cosmid D1044, complete sequence
          Length = 40301

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 269   gccggagacgccnaaggagcctg 291
             |||||||||||| ||||||||||
Sbjct: 32946 gccggagacgcccaaggagcctg 32924



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 311   gccggagacgccnaaggagcctg 333
             |||||||||||| ||||||||||
Sbjct: 32946 gccggagacgcccaaggagcctg 32924



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     ggttgtgccgaagaaggagt 144
               ||||||||||||||||||||
Sbjct: 2419917 ggttgtgccgaagaaggagt 2419898



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>ref|NM_065783.3| Caenorhabditis elegans D1044.6 (D1044.6) mRNA, complete cds
          Length = 3558

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 311 gccggagacgccnaaggagcctg 333
           |||||||||||| ||||||||||
Sbjct: 849 gccggagacgcccaaggagcctg 871



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 269 gccggagacgccnaaggagcctg 291
           |||||||||||| ||||||||||
Sbjct: 849 gccggagacgcccaaggagcctg 871



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     catgcccgagctgccgaagc 222
               ||||||||||||||||||||
Sbjct: 1025909 catgcccgagctgccgaagc 1025928



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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    gagcctgaagtgtcacaccc 346
              ||||||||||||||||||||
Sbjct: 235701 gagcctgaagtgtcacaccc 235682


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,692,978
Number of Sequences: 3902068
Number of extensions: 2692978
Number of successful extensions: 54721
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54403
Number of HSP's gapped (non-prelim): 317
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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