Clone Name | bart09f03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor | 48 | 2e-05 | 2 | UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor | 47 | 3e-05 | 3 | UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein... | 43 | 5e-04 |
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>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor| Length = 287 Score = 47.8 bits (112), Expect = 2e-05 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 4/113 (3%) Frame = +1 Query: 154 SGVDAIGTYCAK---NGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 321 S D + T+C K N TS T +++ +L+ L V G+ Sbjct: 24 SDPDDMETFCMKSSRNTTSNTTYNKNLNTLLSTLSNQSSFANYYNLTTGLASDTVHGMFL 83 Query: 322 CRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAXFIGLADT 480 C GDV R C+ C+ A E+A +C + ++ C++RYS F+ +T Sbjct: 84 CTGDVNRTTCNACVKNATIEIAKNCTNHREAIIYNVDCMVRYSDKFFLTTLET 136 Score = 30.0 bits (66), Expect = 3.5 Identities = 11/47 (23%), Positives = 23/47 (48%) Frame = +1 Query: 313 LAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYST 453 + QC D+ ++C+ CL A +E+ C ++ C++ + T Sbjct: 197 IVQCTPDLDPRNCTTCLKLALQELTECCGNQVWAFIYTPNCMVSFDT 243
>UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor| Length = 286 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = +1 Query: 304 VWGLAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAXFIGLADT 480 V G+ C GDV R C+ C+ A E+A +C + ++Y C++RYS F+ +T Sbjct: 79 VHGMFLCIGDVNRTTCNACVKNATIEIAKNCTNHREAIIYYFSCMVRYSDKFFLSTLET 137 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/48 (25%), Positives = 23/48 (47%) Frame = +1 Query: 313 LAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTA 456 + QC + ++C+ CL A +E+ C +F CL+ + T+ Sbjct: 198 VVQCSPHLDPKNCTTCLKLALQELTQCCGDQLWAFIFTPKCLVSFDTS 245
>UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein 3 precursor| Length = 287 Score = 42.7 bits (99), Expect = 5e-04 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%) Frame = +1 Query: 154 SGVDAIGTYC---AKNGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 321 S D + T+C ++N T T +++ +L+ V+G+ Sbjct: 28 SETDHMDTFCIDSSRNTTGNTTYNKNLNTMLSTFRNQSSIVNNYNLTTGLASDTVYGMFL 87 Query: 322 CRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAXFI 465 C GDV C+ C+ A E+ +C + ++Y C++RYS F+ Sbjct: 88 CTGDVNITTCNNCVKNATIEIVKNCTNHREAIIYYIDCMVRYSDKFFL 135 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/45 (26%), Positives = 21/45 (46%) Frame = +1 Query: 313 LAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRY 447 L QC + ++C++CL A +E+ C +F C + Y Sbjct: 201 LVQCSPHLNPENCTICLEYALQEIIDCCSDKFWAMIFTPNCFVNY 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,695,825 Number of Sequences: 219361 Number of extensions: 339153 Number of successful extensions: 883 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 872 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 883 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)