Clone Name | bart09e06 |
---|---|
Clone Library Name | barley_pub |
>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 85.1 bits (209), Expect = 6e-17 Identities = 56/114 (49%), Positives = 58/114 (50%), Gaps = 5/114 (4%) Frame = +1 Query: 97 MEDERSTQSYQGAEA-DQVEVTDRXXXXXXXXXXXXXXXXXXXXXXVTGMXXXXXXX--- 264 MEDERSTQSYQG EA +QVEVTDR VTGM Sbjct: 1 MEDERSTQSYQGGEAAEQVEVTDRGLLGNLLGKKKAEEDKEKEEELVTGMEKVSVEEPEV 60 Query: 265 -XXXXXDGEKKETLFSKLHRXXXXXXXXXXXXXXXXVIDENGEVIKRKKKKGLK 423 DGEKKETLFSKLHR VID+NGEVIKRKKKKGLK Sbjct: 61 KKEEHEDGEKKETLFSKLHR-SSSSSSSSSDEEEEEVIDDNGEVIKRKKKKGLK 113
>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44| Length = 258 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +1 Query: 292 KETLFSKLHRXXXXXXXXXXXXXXXXVIDENGEVIKRKKKKGLK 423 K +L KLHR ++E GE K+K+KKGLK Sbjct: 72 KPSLLEKLHRSGSSSSSSSSDEE----VEEGGEKKKKKEKKGLK 111
>RDRP_IBDV (Q9Q6Q5) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein| VP1) Length = 881 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 6/36 (16%) Frame = -1 Query: 93 RDRSVQLK----TRGS*RKQRIS--KDYWFLACGFL 4 R+ S LK T+GS +K+ +S DYW+L+CG L Sbjct: 283 RELSTLLKQGAGTKGSNKKKLLSMLSDYWYLSCGLL 318
>RDRP_IBDVA (P12918) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein| VP1) Length = 878 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 6/36 (16%) Frame = -1 Query: 93 RDRSVQLK----TRGS*RKQRIS--KDYWFLACGFL 4 R+ S LK T+GS +K+ +S DYW+L+CG L Sbjct: 282 RELSALLKQGAGTKGSNKKKLLSMLSDYWYLSCGLL 317
>ETBR2_HUMAN (O60883) Endothelin B receptor-like protein 2 precursor (ETBR-LP-2)| (G-protein coupled receptor 37-like 1) Length = 481 Score = 28.9 bits (63), Expect = 5.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 47 CFL*LPRVFSCTDRSRSWRMRGAPSHTRELR 139 C+ LP +F+ T + +WR+RG P E R Sbjct: 316 CYFCLPILFTVTCQLVTWRVRGPPGRKSECR 346
>ETBR2_RAT (Q9QYC5) Endothelin B receptor-like protein 2 precursor (ETBR-LP-2)| (G-protein coupled receptor 37-like 1) (G-protein coupled receptor CNS2) Length = 481 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 47 CFL*LPRVFSCTDRSRSWRMRGAPSHTRELR 139 C+ LP +F+ T + +WR+RG P E R Sbjct: 316 CYFCLPILFTVTCQLVTWRVRGPPGRKPECR 346
>ETBR2_MOUSE (Q99JG2) Endothelin B receptor-like protein 2 precursor (ETBR-LP-2)| (G-protein coupled receptor 37-like 1) Length = 481 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 47 CFL*LPRVFSCTDRSRSWRMRGAPSHTRELR 139 C+ LP +F+ T + +WR+RG P E R Sbjct: 316 CYFCLPILFTVTCQLVTWRVRGPPGRKPECR 346 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,567,629 Number of Sequences: 219361 Number of extensions: 358624 Number of successful extensions: 723 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 720 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 720 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)