ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009306.1| Triticum aestivum clone wlm1.pk0017.b7:fis, full ... 737 0.0
2gb|BT016716.1| Zea mays clone Contig549 mRNA sequence 236 6e-59
3gb|AF461732.1| Zea mays uncoupling protein mRNA, complete cds; n... 236 6e-59
4gb|AY105357.1| Zea mays PCO091508 mRNA sequence 236 6e-59
5gb|AY644461.1| Saccharum officinarum mitochondrial uncoupling pr... 196 5e-47
6dbj|AK104090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
7dbj|AK061318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
8gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
11dbj|AB049998.1| Oryza sativa (japonica cultivar-group) OsUCP2 ge... 149 1e-32
12dbj|AB042429.1| Triticum aestivum WhUCP1b mRNA for uncoupling pr... 48 0.028
13dbj|AB042428.1| Triticum aestivum WhUCP1a mRNA for uncoupling pr... 48 0.028
14gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell ... 44 0.43
15gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell... 44 0.43
16ref|NM_132411.2| Drosophila melanogaster CG1628-RB (CG1628), mRNA 44 0.43
17gb|AY061222.1| Drosophila melanogaster LD16544 full length cDNA 44 0.43
18gb|BT021475.1| Drosophila melanogaster AT02876 full insert cDNA 44 0.43
19gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 ... 44 0.43
20dbj|AB088762.1| Helicodiceros muscivorus HmUCPa mRNA for mitocho... 44 0.43
21gb|AY644460.1| Saccharum officinarum mitochondrial uncoupling pr... 42 1.7
22gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 o... 42 1.7
23emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.7
24dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
25gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.8
26gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.8
27gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.8
28gb|AY233003.1| Antechinus flavipes uncoupling protein 2 mRNA, co... 40 6.8
29gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosyntheti... 40 6.8
30gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.8
31ref|XM_883491.1| Leishmania major strain Friedlin hypothetical p... 40 6.8
32emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4,... 40 6.8
33gb|AC034108.26| Mus musculus strain 129S6/SvEvTac clone rp22-70m... 40 6.8
34gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete... 40 6.8
35ref|NM_001033547.1| Mus musculus RIKEN cDNA 4922505E12 gene (492... 40 6.8
36gb|AC123567.8| Homo sapiens 12 BAC RP11-74K11 (Roswell Park Canc... 40 6.8
37gb|AE012308.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.8
38gb|AE012298.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.8
39gb|BC029934.1| Homo sapiens, clone IMAGE:5165874, mRNA 40 6.8
40dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.8
41dbj|AK132754.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.8
42gb|BC098032.1| Rattus norvegicus similar to hypothetical protein... 40 6.8
43gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.8
44dbj|AK077097.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.8
45ref|NM_005761.1| Homo sapiens plexin C1 (PLXNC1), mRNA 40 6.8
46dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.8
47ref|XM_223013.2| PREDICTED: Rattus norvegicus similar to hypothe... 40 6.8
48ref|XM_343200.2| PREDICTED: Rattus norvegicus plexin C1 (predict... 40 6.8
49dbj|BS000243.1| Pan troglodytes chromosome 22 clone:CH251-388O03... 40 6.8
50dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, ... 40 6.8
51emb|X01422.1|GGALBG3 Chicken ovalbumin gene 3' terminus (non-cod... 40 6.8
52dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.8
53emb|AJ012479.1|AEU012479 Alcaligenes eutrophus plasmid pHG1 nrdD... 40 6.8
54gb|AF030339.1|AF030339 Homo sapiens receptor for viral semaphori... 40 6.8
55gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromoso... 40 6.8
56gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromos... 40 6.8
57gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complet... 40 6.8
58gb|AC034109.24| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 6.8
59gb|AC024069.29| Mus musculus BAC Clone 402k12 RPCI-23, complete ... 40 6.8
60gb|AC024915.24| Mus musculus C57CL/6J RPCI-23, complete sequence 40 6.8
61dbj|AP000471.2| Homo sapiens genomic DNA, chromosome 21q22.3, cl... 40 6.8 
>gb|BT009306.1| Triticum aestivum clone wlm1.pk0017.b7:fis, full insert mRNA
           sequence
          Length = 1376

 Score =  737 bits (372), Expect = 0.0
 Identities = 420/437 (96%)
 Strand = Plus / Plus

                                                                       
Query: 65  tgggcggttgcatccacccgtcagccaagtcagccatggcgccggaccacggctccnagg 124
           ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||
Sbjct: 10  tgggcggttgcatccacccgtcagccaagccaagcatggcgccggaccacggctccaagg 69

                                                                       
Query: 125 tcgacatctccttcgccggccgcttcacagccagcgccatcgccgcctgcttcgccgaga 184
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 70  tcgacatctccttcgccggccgcttcaccgccagcgccatcgccgcctgcttcgccgaga 129

                                                                       
Query: 185 tcaccacaatccccctcgacacggccaaggtcaggctgcagctgcagaagaaggccgtcg 244
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 130 tcaccacgatccccctcgacacggccaaggtcaggctgcagctgcagaagaaggccatcg 189

                                                                       
Query: 245 ccggggatctcgctgggcccaagtaccgcggtctgctcggcactgccgccaccatcgccn 304
           |||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| 
Sbjct: 190 ccggggatctcgctgggcccaagtaccgtggcctgctcggcaccgccgccaccatcgcca 249

                                                                       
Query: 305 aggaggaaggcgccgccgcgctctggaagggcatcgtccctggcctccaccgccngtgca 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 250 aggaggaaggcgccgccgcgctctggaagggcatcgtccctggcctccaccgccagtgca 309

                                                                       
Query: 365 tctacgggggtctccgcattggtctctatgaacccgtcaaagccttctatgttggtgaga 424
           ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 310 tctacggcggtctccgcattggtctctatgagcccgtcaaatccttctatgttggtgaga 369

                                                                       
Query: 425 accatgttggggatgtacctttgtccaagaagatagccgctggcttcaccactggtgctc 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 370 accatgttggggatgtacctttgtccaagaagatagccgctggcttcaccactggtgccc 429

                            
Query: 485 ttgcaattgctgtggcc 501
           ||||||| |||||||||
Sbjct: 430 ttgcaatcgctgtggcc 446
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>gb|BT016716.1| Zea mays clone Contig549 mRNA sequence
          Length = 1326

 Score =  236 bits (119), Expect = 6e-59
 Identities = 195/221 (88%)
 Strand = Plus / Plus

                                                                       
Query: 262 cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
           |||||||||||||| |||||||| |||||||||||||||||   ||||||||| ||||| 
Sbjct: 264 cccaagtaccgcggcctgctcggaactgccgccaccatcgctagggaggaaggggccgca 323

                                                                       
Query: 322 gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
           ||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||
Sbjct: 324 gcgctctggaagggcatcgtcccgggcctccaccgacagtgcatctacggggggctccgc 383

                                                                       
Query: 382 attggtctctatgaacccgtcaaagccttctatgttggtgagaaccatgttggggatgta 441
           ||||| ||||| || || |||||| ||||||| || ||  |  |||| ||||||||||| 
Sbjct: 384 attggcctctacgagcctgtcaaatccttctacgtcggcaaagaccacgttggggatgtc 443

                                                    
Query: 442 cctttgtccaagaagatagccgctggcttcaccactggtgc 482
           ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 444 cctttgtccaagaagatagccgccggcttcacaactggtgc 484



 Score =  153 bits (77), Expect = 7e-34
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggaccacggctccnaggtcgacatctccttcgccggccgcttcacagccagcgccatcgc 167
           ||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 92  ggaccacggctccaagggcgacatctccttcgccggacgcttcacggccagcgccatcgc 151

                                                                       
Query: 168 cgcctgcttcgccgagatcaccacaatccccctcgacacggccaaggtcaggctgcagct 227
            || |||||||| |||||    || ||||| ||||||||||||||||||||||| |||||
Sbjct: 152 agcatgcttcgcagagatatgtaccatcccgctcgacacggccaaggtcaggctccagct 211

                               
Query: 228 gcagaagaaggccgtcgccg 247
           ||||||||| | ||||||||
Sbjct: 212 gcagaagaacgtcgtcgccg 231
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>gb|AF461732.1| Zea mays uncoupling protein mRNA, complete cds; nuclear gene for
           mitochondrial product
          Length = 1243

 Score =  236 bits (119), Expect = 6e-59
 Identities = 195/221 (88%)
 Strand = Plus / Plus

                                                                       
Query: 262 cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
           |||||||||||||| |||||||| |||||||||||||||||   ||||||||| ||||| 
Sbjct: 239 cccaagtaccgcggcctgctcggaactgccgccaccatcgctagggaggaaggggccgca 298

                                                                       
Query: 322 gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
           ||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||
Sbjct: 299 gcgctctggaagggcatcgtcccgggcctccaccgacagtgcatctacggggggctccgc 358

                                                                       
Query: 382 attggtctctatgaacccgtcaaagccttctatgttggtgagaaccatgttggggatgta 441
           ||||| ||||| || || |||||| ||||||| || ||  |  |||| ||||||||||| 
Sbjct: 359 attggcctctacgagcctgtcaaatccttctacgtcggcaaagaccacgttggggatgtc 418

                                                    
Query: 442 cctttgtccaagaagatagccgctggcttcaccactggtgc 482
           ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 419 cctttgtccaagaagatagccgccggcttcacaactggtgc 459



 Score =  153 bits (77), Expect = 7e-34
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggaccacggctccnaggtcgacatctccttcgccggccgcttcacagccagcgccatcgc 167
           ||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 67  ggaccacggctccaagggcgacatctccttcgccggacgcttcacggccagcgccatcgc 126

                                                                       
Query: 168 cgcctgcttcgccgagatcaccacaatccccctcgacacggccaaggtcaggctgcagct 227
            || |||||||| |||||    || ||||| ||||||||||||||||||||||| |||||
Sbjct: 127 agcatgcttcgcagagatatgtaccatcccgctcgacacggccaaggtcaggctccagct 186

                               
Query: 228 gcagaagaaggccgtcgccg 247
           ||||||||| | ||||||||
Sbjct: 187 gcagaagaacgtcgtcgccg 206
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>gb|AY105357.1| Zea mays PCO091508 mRNA sequence
          Length = 1422

 Score =  236 bits (119), Expect = 6e-59
 Identities = 195/221 (88%)
 Strand = Plus / Plus

                                                                       
Query: 262 cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
           |||||||||||||| |||||||| |||||||||||||||||   ||||||||| ||||| 
Sbjct: 241 cccaagtaccgcggcctgctcggaactgccgccaccatcgctagggaggaaggggccgca 300

                                                                       
Query: 322 gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
           ||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||
Sbjct: 301 gcgctctggaagggcatcgtcccgggcctccaccgacagtgcatctacggggggctccgc 360

                                                                       
Query: 382 attggtctctatgaacccgtcaaagccttctatgttggtgagaaccatgttggggatgta 441
           ||||| ||||| || || |||||| ||||||| || ||  |  |||| ||||||||||| 
Sbjct: 361 attggcctctacgagcctgtcaaatccttctacgtcggcaaagaccacgttggggatgtc 420

                                                    
Query: 442 cctttgtccaagaagatagccgctggcttcaccactggtgc 482
           ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 421 cctttgtccaagaagatagccgccggcttcacaactggtgc 461



 Score =  153 bits (77), Expect = 7e-34
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggaccacggctccnaggtcgacatctccttcgccggccgcttcacagccagcgccatcgc 167
           ||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 69  ggaccacggctccaagggcgacatctccttcgccggacgcttcacggccagcgccatcgc 128

                                                                       
Query: 168 cgcctgcttcgccgagatcaccacaatccccctcgacacggccaaggtcaggctgcagct 227
            || |||||||| |||||    || ||||| ||||||||||||||||||||||| |||||
Sbjct: 129 agcatgcttcgcagagatatgtaccatcccgctcgacacggccaaggtcaggctccagct 188

                               
Query: 228 gcagaagaaggccgtcgccg 247
           ||||||||| | ||||||||
Sbjct: 189 gcagaagaacgtcgtcgccg 208
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>gb|AY644461.1| Saccharum officinarum mitochondrial uncoupling protein 2 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1468

 Score =  196 bits (99), Expect = 5e-47
 Identities = 190/221 (85%)
 Strand = Plus / Plus

                                                                       
Query: 262 cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
           |||||||||||||| |||||||| || ||||||||||||||   ||||||||| ||||| 
Sbjct: 315 cccaagtaccgcggcctgctcggaaccgccgccaccatcgctagggaggaaggggccgca 374

                                                                       
Query: 322 gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
           ||||| ||||||||||||||||| |||||||| || | |||||| ||||| || ||||||
Sbjct: 375 gcgctatggaagggcatcgtcccgggcctccatcggcagtgcatttacggcggcctccgc 434

                                                                       
Query: 382 attggtctctatgaacccgtcaaagccttctatgttggtgagaaccatgttggggatgta 441
           ||||| ||||| || || |||||| ||||||| || ||  |  |||||||||| ||||| 
Sbjct: 435 attggcctctacgagcctgtcaaatccttctacgtcggcaaagaccatgttggagatgtc 494

                                                    
Query: 442 cctttgtccaagaagatagccgctggcttcaccactggtgc 482
           ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 495 cctttgtccaagaagatagccgccggcttcacaactggtgc 535



 Score =  168 bits (85), Expect = 1e-38
 Identities = 126/140 (90%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggaccacggctccnaggtcgacatctccttcgccggccgcttcacagccagcgccatcgc 167
           ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 146 ggaccacggctccaaggtcgacatctccttcgccggccgcttcaccgccagcgccatcgc 205

                                                                       
Query: 168 cgcctgcttcgccgagatcaccacaatccccctcgacacggccaaggtcaggctgcagct 227
            || |||||||| |||||   ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 206 agcatgcttcgcagagatatgcaccatcccgctcgacaccgccaaggtcaggctccagct 265

                               
Query: 228 gcagaagaaggccgtcgccg 247
           ||||||||| | ||||||||
Sbjct: 266 gcagaagaacgtcgtcgccg 285
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>dbj|AK104090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B06, full
           insert sequence
          Length = 1179

 Score =  188 bits (95), Expect = 1e-44
 Identities = 189/221 (85%)
 Strand = Plus / Plus

                                                                       
Query: 262 cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
           |||||||||||||| || |||||||| ||||||||||||||    |||||||||||||||
Sbjct: 221 cccaagtaccgcggcctcctcggcaccgccgccaccatcgcgcgcgaggaaggcgccgcc 280

                                                                       
Query: 322 gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
           || |||||||||||||||||||| || |||||||||| |||||||||||| || ||||||
Sbjct: 281 gctctctggaagggcatcgtcccgggactccaccgccagtgcatctacggcggcctccgc 340

                                                                       
Query: 382 attggtctctatgaacccgtcaaagccttctatgttggtgagaaccatgttggggatgta 441
           || || ||||| || ||||| ||| ||||||| |||||  |  ||||||| |||||||| 
Sbjct: 341 atcggcctctacgagcccgtgaaatccttctacgttggcaaagaccatgtcggggatgtg 400

                                                    
Query: 442 cctttgtccaagaagatagccgctggcttcaccactggtgc 482
           ||| |  |||||||||| || || |||||||||||||||||
Sbjct: 401 cctctcaccaagaagatcgctgccggcttcaccactggtgc 441



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                       
Query: 126 cgacatctccttcgccggccgcttcacagccagcgccatcgccgcctgcttcgccgagat 185
           |||||||||||||||| |||||||||| || ||||||||||| || |||||||| ||| |
Sbjct: 91  cgacatctccttcgccagccgcttcaccgcaagcgccatcgctgcatgcttcgctgaggt 150

                                                              
Query: 186 caccacaatccccctcgacacggccaaggtcaggctgcagctgcagaagaa 236
              ||| |||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 151 gtgcacgatccccctggatacggccaaggtgaggcttcagctgcagaagaa 201
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>dbj|AK061318.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D12, full
           insert sequence
          Length = 1263

 Score =  188 bits (95), Expect = 1e-44
 Identities = 189/221 (85%)
 Strand = Plus / Plus

                                                                       
Query: 262 cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
           |||||||||||||| || |||||||| ||||||||||||||    |||||||||||||||
Sbjct: 223 cccaagtaccgcggcctcctcggcaccgccgccaccatcgcgcgcgaggaaggcgccgcc 282

                                                                       
Query: 322 gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
           || |||||||||||||||||||| || |||||||||| |||||||||||| || ||||||
Sbjct: 283 gctctctggaagggcatcgtcccgggactccaccgccagtgcatctacggcggcctccgc 342

                                                                       
Query: 382 attggtctctatgaacccgtcaaagccttctatgttggtgagaaccatgttggggatgta 441
           || || ||||| || ||||| ||| ||||||| |||||  |  ||||||| |||||||| 
Sbjct: 343 atcggcctctacgagcccgtgaaatccttctacgttggcaaagaccatgtcggggatgtg 402

                                                    
Query: 442 cctttgtccaagaagatagccgctggcttcaccactggtgc 482
           ||| |  |||||||||| || || |||||||||||||||||
Sbjct: 403 cctctcaccaagaagatcgctgccggcttcaccactggtgc 443



 Score =  109 bits (55), Expect = 9e-21
 Identities = 97/111 (87%)
 Strand = Plus / Plus

                                                                       
Query: 126 cgacatctccttcgccggccgcttcacagccagcgccatcgccgcctgcttcgccgagat 185
           ||||||||||||||||||||||||||| || ||||||||||| || |||||||| ||| |
Sbjct: 93  cgacatctccttcgccggccgcttcaccgcaagcgccatcgctgcatgcttcgctgaggt 152

                                                              
Query: 186 caccacaatccccctcgacacggccaaggtcaggctgcagctgcagaagaa 236
              ||| |||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 153 gtgcacgatccccctggatacggccaaggtgaggcttcagctgcagaagaa 203
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  149 bits (75), Expect = 1e-32
 Identities = 124/141 (87%)
 Strand = Plus / Plus

                                                                         
Query: 262   cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
             |||||||||||||| || |||||||| ||||||||||||||    |||||||||||||||
Sbjct: 57578 cccaagtaccgcggcctcctcggcaccgccgccaccatcgcgcgcgaggaaggcgccgcc 57637

                                                                         
Query: 322   gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
             || |||||||||||||||||||| || |||||||||| |||||||||||| || ||||||
Sbjct: 57638 gctctctggaagggcatcgtcccgggactccaccgccagtgcatctacggcggcctccgc 57697

                                  
Query: 382   attggtctctatgaacccgtc 402
             || || ||||| || ||||||
Sbjct: 57698 atcggcctctacgagcccgtc 57718



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 126   cgacatctccttcgccggccgcttcacagccagcgccatcgccgcctgcttcgc 179
             ||||||||||||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 57326 cgacatctccttcgccggccgcttcaccgcaagcgccatcgctgcatgcttcgc 57379



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 193   atccccctcgacacggccaaggtcaggctgcagctgcagaagaa 236
             |||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 57515 atccccctggatacggccaaggtgaggcttcagctgcagaagaa 57558



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 425   accatgttggggatgtacctttgtccaagaagatagccgctggcttcaccactggtgctc 484
             ||||||| |||||||| ||| |  |||||||||| || || ||||||||||||||| |||
Sbjct: 57829 accatgtcggggatgtgcctctcaccaagaagatcgctgccggcttcaccactggtactc 57888

              
Query: 485   t 485
             |
Sbjct: 57889 t 57889
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  149 bits (75), Expect = 1e-32
 Identities = 124/141 (87%)
 Strand = Plus / Plus

                                                                            
Query: 262      cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
                |||||||||||||| || |||||||| ||||||||||||||    |||||||||||||||
Sbjct: 28330840 cccaagtaccgcggcctcctcggcaccgccgccaccatcgcgcgcgaggaaggcgccgcc 28330899

                                                                            
Query: 322      gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
                || |||||||||||||||||||| || |||||||||| |||||||||||| || ||||||
Sbjct: 28330900 gctctctggaagggcatcgtcccgggactccaccgccagtgcatctacggcggcctccgc 28330959

                                     
Query: 382      attggtctctatgaacccgtc 402
                || || ||||| || ||||||
Sbjct: 28330960 atcggcctctacgagcccgtc 28330980



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 126      cgacatctccttcgccggccgcttcacagccagcgccatcgccgcctgcttcgc 179
                ||||||||||||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 28330588 cgacatctccttcgccggccgcttcaccgcaagcgccatcgctgcatgcttcgc 28330641



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 193      atccccctcgacacggccaaggtcaggctgcagctgcagaagaa 236
                |||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 28330777 atccccctggatacggccaaggtgaggcttcagctgcagaagaa 28330820



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 425      accatgttggggatgtacctttgtccaagaagatagccgctggcttcaccactggtgctc 484
                ||||||| |||||||| ||| |  |||||||||| || || ||||||||||||||| |||
Sbjct: 28331091 accatgtcggggatgtgcctctcaccaagaagatcgctgccggcttcaccactggtactc 28331150

                 
Query: 485      t 485
                |
Sbjct: 28331151 t 28331151
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  149 bits (75), Expect = 1e-32
 Identities = 124/141 (87%)
 Strand = Plus / Plus

                                                                            
Query: 262      cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
                |||||||||||||| || |||||||| ||||||||||||||    |||||||||||||||
Sbjct: 28313289 cccaagtaccgcggcctcctcggcaccgccgccaccatcgcgcgcgaggaaggcgccgcc 28313348

                                                                            
Query: 322      gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
                || |||||||||||||||||||| || |||||||||| |||||||||||| || ||||||
Sbjct: 28313349 gctctctggaagggcatcgtcccgggactccaccgccagtgcatctacggcggcctccgc 28313408

                                     
Query: 382      attggtctctatgaacccgtc 402
                || || ||||| || ||||||
Sbjct: 28313409 atcggcctctacgagcccgtc 28313429



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 126      cgacatctccttcgccggccgcttcacagccagcgccatcgccgcctgcttcgc 179
                ||||||||||||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 28313037 cgacatctccttcgccggccgcttcaccgcaagcgccatcgctgcatgcttcgc 28313090



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 193      atccccctcgacacggccaaggtcaggctgcagctgcagaagaa 236
                |||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 28313226 atccccctggatacggccaaggtgaggcttcagctgcagaagaa 28313269



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 425      accatgttggggatgtacctttgtccaagaagatagccgctggcttcaccactggtgctc 484
                ||||||| |||||||| ||| |  |||||||||| || || ||||||||||||||| |||
Sbjct: 28313540 accatgtcggggatgtgcctctcaccaagaagatcgctgccggcttcaccactggtactc 28313599

                 
Query: 485      t 485
                |
Sbjct: 28313600 t 28313600
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>dbj|AB049998.1| Oryza sativa (japonica cultivar-group) OsUCP2 gene for uncoupling
           protein, complete cds
          Length = 3939

 Score =  149 bits (75), Expect = 1e-32
 Identities = 124/141 (87%)
 Strand = Plus / Plus

                                                                       
Query: 262 cccaagtaccgcggtctgctcggcactgccgccaccatcgccnaggaggaaggcgccgcc 321
           |||||||||||||| || |||||||| ||||||||||||||    |||||||||||||||
Sbjct: 608 cccaagtaccgcggcctcctcggcaccgccgccaccatcgcgcgcgaggaaggcgccgcc 667

                                                                       
Query: 322 gcgctctggaagggcatcgtccctggcctccaccgccngtgcatctacgggggtctccgc 381
           || |||||||||||||||||||| || |||||||||| |||||||||||| || ||||||
Sbjct: 668 gctctctggaagggcatcgtcccgggactccaccgccagtgcatctacggcggcctccgc 727

                                
Query: 382 attggtctctatgaacccgtc 402
           || || ||||| || ||||||
Sbjct: 728 atcggcctctacgagcccgtc 748



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 126 cgacatctccttcgccggccgcttcacagccagcgccatcgccgcctgcttcgc 179
           ||||||||||||||||||||||||||| || ||||||||||| || ||||||||
Sbjct: 356 cgacatctccttcgccggccgcttcaccgcaagcgccatcgctgcatgcttcgc 409



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 193 atccccctcgacacggccaaggtcaggctgcagctgcagaagaa 236
           |||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 545 atccccctggatacggccaaggtgaggcttcagctgcagaagaa 588



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 425 accatgttggggatgtacctttgtccaagaagatagccgctggcttcaccactggtgctc 484
           ||||||| |||||||| ||| |  |||||||||| || || ||||||||||||||| |||
Sbjct: 859 accatgtcggggatgtgcctctcaccaagaagatcgctgccggcttcaccactggtactc 918

            
Query: 485 t 485
           |
Sbjct: 919 t 919
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>dbj|AB042429.1| Triticum aestivum WhUCP1b mRNA for uncoupling protein, complete cds
          Length = 971

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 306 ggaggaaggcgccgccgcgctctggaagggcatcgtccctggcctccaccgccngtgcat 365
           ||||||||||| |  ||| || |||||||||||| |||||||| | ||||||| |||| |
Sbjct: 246 ggaggaaggcgtcagcgcactttggaagggcatcatccctggctttcaccgccagtgcct 305

              
Query: 366 cta 368
           |||
Sbjct: 306 cta 308



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 156 cagcgccatcgccgcctgcttcgc 179
           ||||||||||||| ||||||||||
Sbjct: 105 cagcgccatcgcctcctgcttcgc 128
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>dbj|AB042428.1| Triticum aestivum WhUCP1a mRNA for uncoupling protein, complete cds
          Length = 974

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 306 ggaggaaggcgccgccgcgctctggaagggcatcgtccctggcctccaccgccngtgcat 365
           ||||||||||| | |||| || |||||||||||| |||||||| | || |||| |||| |
Sbjct: 249 ggaggaaggcgtcaccgcactttggaagggcatcatccctggctttcatcgccagtgcct 308

              
Query: 366 cta 368
           |||
Sbjct: 309 cta 311



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 156 cagcgccatcgccgcctgcttcgc 179
           ||||||||||||| ||||||||||
Sbjct: 108 cagcgccatcgcctcctgcttcgc 131
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>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179363

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 196   cccctcgacacggccaaggtcaggctgcag 225
             ||||||||||||| |||||||| |||||||
Sbjct: 30040 cccctcgacacggtcaaggtcaagctgcag 30069
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>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163710

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 196    cccctcgacacggccaaggtcaggctgcag 225
              ||||||||||||| |||||||| |||||||
Sbjct: 128087 cccctcgacacggtcaaggtcaagctgcag 128116
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>ref|NM_132411.2| Drosophila melanogaster CG1628-RB (CG1628), mRNA
          Length = 2032

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 196 cccctcgacacggccaaggtcaggctgcag 225
           ||||||||||||| |||||||| |||||||
Sbjct: 717 cccctcgacacggtcaaggtcaagctgcag 746
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>gb|AY061222.1| Drosophila melanogaster LD16544 full length cDNA
          Length = 1505

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 196 cccctcgacacggccaaggtcaggctgcag 225
           ||||||||||||| |||||||| |||||||
Sbjct: 175 cccctcgacacggtcaaggtcaagctgcag 204
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>gb|BT021475.1| Drosophila melanogaster AT02876 full insert cDNA
          Length = 1759

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 196 cccctcgacacggccaaggtcaggctgcag 225
           ||||||||||||| |||||||| |||||||
Sbjct: 718 cccctcgacacggtcaaggtcaagctgcag 747
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>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete
              sequence
          Length = 285729

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 196    cccctcgacacggccaaggtcaggctgcag 225
              ||||||||||||| |||||||| |||||||
Sbjct: 114659 cccctcgacacggtcaaggtcaagctgcag 114630
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>dbj|AB088762.1| Helicodiceros muscivorus HmUCPa mRNA for mitochondrial uncoupling
           protein, complete cds
          Length = 1209

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 382 attggtctctatgaacccgtcaaagccttctatgttggtgag 423
           ||||| || |||||||| |||||  |||||||||||||||||
Sbjct: 299 attgggctttatgaaccagtcaagtccttctatgttggtgag 340
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>gb|AY644460.1| Saccharum officinarum mitochondrial uncoupling protein 1 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1240

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 70/87 (80%)
 Strand = Plus / Plus

                                                                       
Query: 297 catcgccnaggaggaaggcgccgccgcgctctggaagggcatcgtccctggcctccaccg 356
           |||||||  ||||||||| |  || ||||||||||||||  || | ||||| || |||||
Sbjct: 265 catcgccagggaggaaggggttgctgcgctctggaagggtgtcattcctggtcttcaccg 324

                                      
Query: 357 ccngtgcatctacgggggtctccgcat 383
           || || | ||||||| || ||||||||
Sbjct: 325 ccagttcctctacggtggcctccgcat 351



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 156 cagcgccatcgccgcctgcttcgc 179
           ||||||| ||||||||||||||||
Sbjct: 115 cagcgccttcgccgcctgcttcgc 138
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>gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 of the complete genome
          Length = 16268

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 154   gccagcgccatcgccgcctgc 174
             |||||||||||||||||||||
Sbjct: 10429 gccagcgccatcgccgcctgc 10449
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 163     atcgccgcctgcttcgccgag 183
               |||||||||||||||||||||
Sbjct: 1384786 atcgccgcctgcttcgccgag 1384806
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>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete
              sequence
          Length = 191270

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 417    tggtgagaaccatgttgggga 437
              |||||||||||||||||||||
Sbjct: 147839 tggtgagaaccatgttgggga 147819
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      ggtggtgccggtgctgggcg 70
               ||||||||||||||||||||
Sbjct: 3443658 ggtggtgccggtgctgggcg 3443639
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 477     tggtgctcttgcaattgctg 496
               ||||||||||||||||||||
Sbjct: 3006200 tggtgctcttgcaattgctg 3006219
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 314     gcgccgccgcgctctggaag 333
               ||||||||||||||||||||
Sbjct: 5393133 gcgccgccgcgctctggaag 5393152
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>gb|AY233003.1| Antechinus flavipes uncoupling protein 2 mRNA, complete cds;
           nuclear gene for mitochondrial product
          Length = 1576

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 194 tccccctcgacacggccaaggtcaggctgcag 225
           ||||||| ||||| ||||| ||||||||||||
Sbjct: 488 tccccctggacacagccaaagtcaggctgcag 519
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>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster,
             complete sequence
          Length = 135638

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   tcgccgcctgcttcgccgag 183
             ||||||||||||||||||||
Sbjct: 77338 tcgccgcctgcttcgccgag 77357
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 48      cgcggtggtgccggtgctgg 67
               ||||||||||||||||||||
Sbjct: 3577388 cgcggtggtgccggtgctgg 3577369
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>ref|XM_883491.1| Leishmania major strain Friedlin hypothetical protein (L2969.06)
            partial mRNA
          Length = 9039

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 114  cggctccnaggtcgacatctccttcgccggc 144
            |||| || ||||||||||| |||||||||||
Sbjct: 4998 cggcaccaaggtcgacatcaccttcgccggc 5028
to top
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                             
Query: 114    cggctccnaggtcgacatctccttcgccggc 144
              |||| || ||||||||||| |||||||||||
Sbjct: 195114 cggcaccaaggtcgacatcaccttcgccggc 195084
to top
>gb|AC034108.26| Mus musculus strain 129S6/SvEvTac clone rp22-70m05 map 1, complete
             sequence
          Length = 175231

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    gcacttgtgacagaagagag 30
             ||||||||||||||||||||
Sbjct: 34226 gcacttgtgacagaagagag 34245
to top
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence
          Length = 452156

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    cggtctgctcggcactgccg 292
              ||||||||||||||||||||
Sbjct: 254402 cggtctgctcggcactgccg 254421
to top
>ref|NM_001033547.1| Mus musculus RIKEN cDNA 4922505E12 gene (4922505E12Rik), mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  caggctgcagctgcagaaga 235
            ||||||||||||||||||||
Sbjct: 1238 caggctgcagctgcagaaga 1257
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>gb|AC123567.8| Homo sapiens 12 BAC RP11-74K11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114800

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   ggaggaaggcgccgccgcgc 325
             ||||||||||||||||||||
Sbjct: 20759 ggaggaaggcgccgccgcgc 20778
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>gb|AE012308.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 216
            of 460 of the complete genome
          Length = 11019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   tcgcggtggtgccggtgctg 66
            ||||||||||||||||||||
Sbjct: 1410 tcgcggtggtgccggtgctg 1429
to top
>gb|AE012298.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 206
            of 460 of the complete genome
          Length = 12693

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  catcgccgcctgcttcgccg 181
            ||||||||||||||||||||
Sbjct: 9104 catcgccgcctgcttcgccg 9123
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>gb|BC029934.1| Homo sapiens, clone IMAGE:5165874, mRNA
          Length = 965

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 ggaggaaggcgccgccgcgc 325
           ||||||||||||||||||||
Sbjct: 38  ggaggaaggcgccgccgcgc 57
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 52      gtggtgccggtgctgggcgg 71
               ||||||||||||||||||||
Sbjct: 4247456 gtggtgccggtgctgggcgg 4247475
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>dbj|AK132754.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4922505E12 product:Hypothetical beta
            tubulin containing protein (Fragment), full insert
            sequence
          Length = 2055

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  caggctgcagctgcagaaga 235
            ||||||||||||||||||||
Sbjct: 1238 caggctgcagctgcagaaga 1257
to top
>gb|BC098032.1| Rattus norvegicus similar to hypothetical protein FLJ35728, mRNA
            (cDNA clone IMAGE:7456462), partial cds
          Length = 2057

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  caggctgcagctgcagaaga 235
            ||||||||||||||||||||
Sbjct: 1213 caggctgcagctgcagaaga 1232
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     catcgccgcctgcttcgccg 181
               ||||||||||||||||||||
Sbjct: 2700518 catcgccgcctgcttcgccg 2700499



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 47      tcgcggtggtgccggtgctg 66
               ||||||||||||||||||||
Sbjct: 2591499 tcgcggtggtgccggtgctg 2591480
to top
>dbj|AK077097.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933404O04 product:hypothetical Beta
           tubulin containing protein, full insert sequence
          Length = 1361

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 caggctgcagctgcagaaga 235
           ||||||||||||||||||||
Sbjct: 546 caggctgcagctgcagaaga 565
to top
>ref|NM_005761.1| Homo sapiens plexin C1 (PLXNC1), mRNA
          Length = 5121

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 ggaggaaggcgccgccgcgc 325
           ||||||||||||||||||||
Sbjct: 263 ggaggaaggcgccgccgcgc 282
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 159     cgccatcgccgcctgcttcg 178
               ||||||||||||||||||||
Sbjct: 8963974 cgccatcgccgcctgcttcg 8963955
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>ref|XM_223013.2| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ35728
            (LOC289334), mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  caggctgcagctgcagaaga 235
            ||||||||||||||||||||
Sbjct: 1200 caggctgcagctgcagaaga 1219
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>ref|XM_343200.2| PREDICTED: Rattus norvegicus plexin C1 (predicted)
           (Plxnc1_predicted), mRNA
          Length = 4815

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 ggaggaaggcgccgccgcgc 325
           ||||||||||||||||||||
Sbjct: 14  ggaggaaggcgccgccgcgc 33
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>dbj|BS000243.1| Pan troglodytes chromosome 22 clone:CH251-388O03, map 22, complete
             sequences
          Length = 182350

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ggccaaggtcaggctgcagc 226
             ||||||||||||||||||||
Sbjct: 29828 ggccaaggtcaggctgcagc 29809
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>dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, map 22, complete
              sequences
          Length = 224098

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    ggccaaggtcaggctgcagc 226
              ||||||||||||||||||||
Sbjct: 170963 ggccaaggtcaggctgcagc 170944
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>emb|X01422.1|GGALBG3 Chicken ovalbumin gene 3' terminus (non-coding strand)
          Length = 1829

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 gctgcagctgcagaagaagg 238
           ||||||||||||||||||||
Sbjct: 736 gctgcagctgcagaagaagg 755
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>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    ggccaaggtcaggctgcagc 226
              ||||||||||||||||||||
Sbjct: 333647 ggccaaggtcaggctgcagc 333628
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>emb|AJ012479.1|AEU012479 Alcaligenes eutrophus plasmid pHG1 nrdD and nrdG genes
          Length = 3300

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  cggtctgctcggcactgccg 292
            ||||||||||||||||||||
Sbjct: 1369 cggtctgctcggcactgccg 1350
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>gb|AF030339.1|AF030339 Homo sapiens receptor for viral semaphorin protein (VESPR) mRNA,
           complete cds
          Length = 5121

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 ggaggaaggcgccgccgcgc 325
           ||||||||||||||||||||
Sbjct: 263 ggaggaaggcgccgccgcgc 282
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>gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromosome unknown, complete
              sequence
          Length = 207137

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    gctgcagctgcagaagaagg 238
              ||||||||||||||||||||
Sbjct: 196810 gctgcagctgcagaagaagg 196829
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>gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromosome unknown, complete
             sequence
          Length = 205302

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   gctgcagctgcagaagaagg 238
             ||||||||||||||||||||
Sbjct: 73573 gctgcagctgcagaagaagg 73592
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>gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complete sequence
          Length = 204175

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    caggctgcagctgcagaaga 235
              ||||||||||||||||||||
Sbjct: 143837 caggctgcagctgcagaaga 143818
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>gb|AC034109.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-88k7, complete
              sequence
          Length = 227773

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     gcacttgtgacagaagagag 30
              ||||||||||||||||||||
Sbjct: 193705 gcacttgtgacagaagagag 193686
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>gb|AC024069.29| Mus musculus BAC Clone 402k12 RPCI-23, complete sequence
          Length = 242808

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     gcacttgtgacagaagagag 30
              ||||||||||||||||||||
Sbjct: 105699 gcacttgtgacagaagagag 105718
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>gb|AC024915.24| Mus musculus C57CL/6J RPCI-23, complete sequence
          Length = 225646

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     gcacttgtgacagaagagag 30
              ||||||||||||||||||||
Sbjct: 105698 gcacttgtgacagaagagag 105717
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>dbj|AP000471.2| Homo sapiens genomic DNA, chromosome 21q22.3, clone:B2308H15
          Length = 75008

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ggccaaggtcaggctgcagc 226
             ||||||||||||||||||||
Sbjct: 48051 ggccaaggtcaggctgcagc 48032


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,437,207
Number of Sequences: 3902068
Number of extensions: 3437207
Number of successful extensions: 74825
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73875
Number of HSP's gapped (non-prelim): 943
length of query: 501
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 479
effective length of database: 17,147,199,772
effective search space: 8213508690788
effective search space used: 8213508690788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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