ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart09e03 |
|---|---|
| Clone Library Name | barley_pub |
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 31.2 bits (69), Expect = 0.77 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Frame = +2 Query: 2 PSVRAHDCAPHAGRQPVQLPRRPRAQLI--------APPTPSHRSFARADPADQSGHLRQ 157 P + A P + Q Q+P +PR L+ APPT H A P++Q Sbjct: 449 PQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAP 508 Query: 158 LSQA 169 LS++ Sbjct: 509 LSKS 512
>CD2_MACFA (Q6SZ61) T-cell surface antigen CD2 precursor| Length = 351 Score = 30.8 bits (68), Expect = 1.0 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +2 Query: 8 VRAHDCAPHA-GRQPVQLP----RRPRAQLIAPPTPSHRSFARADPADQSGH 148 +RAH A GR+P Q+P + P A PP P HRS A + GH Sbjct: 251 IRAHRVATEERGRKPHQIPASTPQNPAASQHPPPPPGHRSQAPSHRPLPPGH 302
>ATG13_EMENI (Q5BBK4) Autophagy-related protein 13| Length = 974 Score = 30.4 bits (67), Expect = 1.3 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Frame = +2 Query: 17 HDCAPHAGRQPV---QLPRRPRAQLIAPPTPSHR---SFARADPADQSGHLRQLSQARSG 178 H P G P+ + R RA +PPT SHR + ARA P ++ L + Sbjct: 374 HHVGPTTGASPISALRAAREARASSPSPPTSSHRNSFAAARASPVGRAATLANDTNPNVA 433 Query: 179 RRHGV 193 RR + Sbjct: 434 RRPSI 438
>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30| Length = 782 Score = 30.0 bits (66), Expect = 1.7 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +3 Query: 3 RPSALTTARHMPAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQ 131 RPS +T + P+VS A P PSL PRP P R P Q Sbjct: 507 RPSPITLFQ--PSVSSTGPVAVPPPSLTPRPSLPPQRFSGPSQ 547
>LACTB_HUMAN (P83111) Serine beta-lactamase-like protein LACTB| Length = 547 Score = 30.0 bits (66), Expect = 1.7 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 57 SPAGPEPSL*PRPRHPTARSLAPIQPISPA 146 SPA P+P P P +SLAP P +PA Sbjct: 68 SPAAPDPEASPLAEPPQEQSLAPWSPQTPA 97
>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte receptor) (Rosette receptor) Length = 351 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = +2 Query: 11 RAHDCAPHA-GRQPVQLP----RRPRAQLIAPPTPSHRSFARADPADQSGH 148 RAH A GR+P Q+P + P PP P HRS A + GH Sbjct: 252 RAHRVATEERGRKPQQIPASTPQNPATSQHPPPPPGHRSQAPSHRPPPPGH 302
>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein| Length = 1729 Score = 29.3 bits (64), Expect = 2.9 Identities = 21/70 (30%), Positives = 28/70 (40%) Frame = +3 Query: 3 RPSALTTARHMPAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQPISPAIFASSAKLDPVA 182 +P AL +PA P GP P P P+AR + P P + S + P A Sbjct: 43 KPRALPAKPALPAKPSLLVPVGPRPPRGPLAELPSARKMN--MPAGPQPYGGSKRPLPFA 100 Query: 183 GMGCGFSSTG 212 +STG Sbjct: 101 PRPAVEASTG 110
>NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK) (Divergent of neuregulin-1) (DON-1)] Length = 850 Score = 29.3 bits (64), Expect = 2.9 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 9 SALTTARHMPAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQPISPAIFASSAKLDPVAG 185 S+ ++ + ++SR +P P P P+PR P AR A S A A + DP G Sbjct: 45 SSSRSSSNNSSISRPAAPPEPRPQQQPQPRSPAARRAA---ARSRAAAAGGMRRDPAPG 100
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 29.3 bits (64), Expect = 2.9 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = +3 Query: 36 PAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQPI----SPAIFASSAKLDPVAGMGCGFS 203 P + NS PE L P P HP + AP P+ PA+ A+ LD A + Sbjct: 1569 PPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYD 1628 Query: 204 S 206 S Sbjct: 1629 S 1629
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.9 bits (63), Expect = 3.8 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +3 Query: 36 PAVSRFNSPAGPEPSL*PRPRHPT-ARSLAPIQPISPAIFASSAKLDPVA 182 P R + P L RP+ P A++LAP P P IF + DP A Sbjct: 2055 PLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYA 2104
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 28.9 bits (63), Expect = 3.8 Identities = 22/57 (38%), Positives = 27/57 (47%) Frame = +3 Query: 6 PSALTTARHMPAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQPISPAIFASSAKLDP 176 P+ + A PA SPA P PS P P P+ S AP P SPA + S + P Sbjct: 106 PAPPSPAPPSPAPPSPPSPAPPSPSP-PAPPSPSPPSPAPPLPPSPAPPSPSPPVPP 161 Score = 28.5 bits (62), Expect = 5.0 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +3 Query: 36 PAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQPISPA 146 P V +P P P + P P P+ S AP P SPA Sbjct: 196 PPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPA 232
>MLE_DROME (P24785) Dosage compensation regulator (EC 3.6.1.-) (ATP-dependent| RNA helicase mle) (Protein male-less) (Protein no action potential) Length = 1293 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 47 PVQLPRRPRAQLIAPPTPSHRSFARADPADQSGHLRQLS 163 PV PR + +L PP P + +R D + Q G RQ S Sbjct: 285 PVVNPRNIKIELDGPPIPLIVNLSRIDSSQQDGEKRQES 323
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 28.9 bits (63), Expect = 3.8 Identities = 22/63 (34%), Positives = 24/63 (38%) Frame = +2 Query: 2 PSVRAHDCAPHAGRQPVQLPRRPRAQLIAPPTPSHRSFARADPADQSGHLRQLSQARSGR 181 PS + AP A RQ P APP R P +G RQ SQA G Sbjct: 552 PSPQRQAGAPQATRQASISGPAPTKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPGP 611 Query: 182 RHG 190 R G Sbjct: 612 RTG 614
>ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)| Length = 860 Score = 28.5 bits (62), Expect = 5.0 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -2 Query: 145 AGLIGWIGASERAVGWRGRGYKLGSGPAG 59 AGL+G GA +G G G LG+ PAG Sbjct: 74 AGLLGTFGAGPGGLGGAGPGAGLGAFPAG 102
>GCSP_BRAJA (Q89I86) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 955 Score = 28.5 bits (62), Expect = 5.0 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +3 Query: 60 PAGPEPSL*P-RPRHPTARSLAPIQPISPAIFASSAKL 170 P G + L P P HP R AP+ P+S A F S++ L Sbjct: 717 PIGVKAHLAPFLPGHPATRGDAPVGPVSAAPFGSASIL 754
>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid| hormone receptor-associated protein complex 240 kDa component-like) Length = 2207 Score = 28.5 bits (62), Expect = 5.0 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +3 Query: 54 NSPAGP-EPSL*PRPRHPTARSL-APIQPISPAIFASSAKLDPVA 182 +SP P P+L P+PR A SL P P++PA++ + L ++ Sbjct: 544 HSPISPLPPTLSPQPRGQEAESLDPPSVPVNPALYGNGLDLQQLS 588
>MAST1_RAT (Q810W7) Microtubule-associated serine/threonine-protein kinase 1| (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1570 Score = 28.1 bits (61), Expect = 6.5 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 11 RAHDCAP-HAGRQPVQLPRRPRAQLIAPPTPSHRSFARADPAD 136 R H P H G P+ PR +P TP+H SFA + AD Sbjct: 48 RPHSPLPGHLGSSPLDSPRN-----FSPNTPAHFSFASSRRAD 85
>MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-protein kinase 1| (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1570 Score = 28.1 bits (61), Expect = 6.5 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 11 RAHDCAP-HAGRQPVQLPRRPRAQLIAPPTPSHRSFARADPAD 136 R H P H G P+ PR +P TP+H SFA + AD Sbjct: 48 RPHSPLPGHLGSSPLDSPRN-----FSPNTPAHFSFASSRRAD 85
>FINC_HUMAN (P02751) Fibronectin precursor (FN) (Cold-insoluble globulin) (CIG)| Length = 2386 Score = 28.1 bits (61), Expect = 6.5 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -2 Query: 190 PMPATGSSLAELAKMAGLIGWIGASERAVGWR 95 P+ AT S+ E+ + ++ W+ AS+ G+R Sbjct: 720 PLVATSESVTEITASSFVVSWVSASDTVSGFR 751
>EGR1_POEGU (O73693) Early growth response protein 1 (EGR-1) (Zinc finger| protein ZENK) (Fragment) Length = 193 Score = 28.1 bits (61), Expect = 6.5 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = +3 Query: 6 PSALTTARHMPAVSRFNSPAGPEPSL*PRPRHPT--ARSLAPIQPISPAIF 152 PS++TT P + ++SPA PS P P H T + S+A P A F Sbjct: 106 PSSITTTYPSPVRTAYSSPA---PSSYPSPVHTTFPSPSIATTYPSGTATF 153
>YGGA_AERHY (P52047) Putative amino acid transporter yggA| Length = 225 Score = 28.1 bits (61), Expect = 6.5 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -2 Query: 136 IGWIGASERAVGWRGRGYKLGSGP 65 +GW G WRG+G KL P Sbjct: 80 LGWFGIRSLRSAWRGQGAKLADSP 103
>UCP8_SCHPO (O94685) UBA domain-containing protein 8| Length = 884 Score = 28.1 bits (61), Expect = 6.5 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Frame = +3 Query: 18 TTARHMPAVSRFNSPAGPEPSL*PRPRH-----PTARSLAPIQPISPAIFASSA 164 T A + PA+ +PA P P+ P +H P S++P P +P A+S+ Sbjct: 715 TGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSS 768
>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 28.1 bits (61), Expect = 6.5 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +3 Query: 36 PAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQPISPAIFASS--AKLDPVA 182 P+ + F +P GP P+ P + S AP +P + ++ A PVA Sbjct: 109 PSSTTFQAPLGPSPTTPPAAERTSTTSQAPTRPAPTTLSTTTGPAPTTPVA 159
>LIFO2_BURCE (Q9ZEM5) Lipase chaperone (Lipase foldase) (Lipase helper protein)| (Lipase activator protein) (Lipase modulator) Length = 344 Score = 28.1 bits (61), Expect = 6.5 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 166 LAELAKMAGLIGWIGASERAVGWRGRGYKLGSGPAGEL 53 LA A + G++G + A W G G+ G+G AGEL Sbjct: 10 LARCAVVYGVVG-LAAIAGVAMWSGAGWHRGTGTAGEL 46
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 28.1 bits (61), Expect = 6.5 Identities = 14/56 (25%), Positives = 23/56 (41%) Frame = +3 Query: 9 SALTTARHMPAVSRFNSPAGPEPSL*PRPRHPTARSLAPIQPISPAIFASSAKLDP 176 +++ + H P +SP GP+P P P P ++ P+ F S P Sbjct: 292 TSMVSPSHPPPAPPLSSPPGPKPGFAPPPAPPPPPPMSVPPPLPSMGFGSPGTPPP 347
>MAST1_MOUSE (Q9R1L5) Microtubule-associated serine/threonine-protein kinase 1| (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1566 Score = 28.1 bits (61), Expect = 6.5 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 11 RAHDCAP-HAGRQPVQLPRRPRAQLIAPPTPSHRSFARADPAD 136 R H P H G P+ PR +P TP+H SFA + AD Sbjct: 48 RPHSPLPGHLGSSPLDSPRN-----FSPNTPAHFSFASSRRAD 85
>UL49_HHV11 (P10233) Tegument protein UL49| Length = 301 Score = 27.7 bits (60), Expect = 8.5 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = +2 Query: 35 AGRQPVQLPRRPRAQLIAPPTPSHRSFARADPADQSGHLRQLSQARS 175 AGR P PR PR Q +A P A PA ++ R+ +Q S Sbjct: 111 AGRTPTTAPRAPRTQRVATKAP-------AAPAAETTRGRKSAQPES 150
>Y2205_ARCFU (O28078) Hypothetical protein AF2205| Length = 508 Score = 27.7 bits (60), Expect = 8.5 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 7/52 (13%) Frame = -2 Query: 136 IGWIGASERAVGWRG-------RGYKLGSGPAGELNRLTAGMWRAVVSADGR 2 I W G S R +GWR RG +LG G + + G R VV DG+ Sbjct: 266 INWDGKSLR-LGWRAEYQTGEQRGGRLGKGSGSTPSLMNCGEDRFVVITDGQ 316
>SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)| Length = 608 Score = 27.7 bits (60), Expect = 8.5 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +2 Query: 65 RPRAQLIAPPTPSHRSFARADP 130 RP A L APPT +H + A+P Sbjct: 508 RPEASLYAPPTHTHNALVPANP 529
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 27.7 bits (60), Expect = 8.5 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +3 Query: 60 PAGPEPSL*PRPRHPTARSLAPIQPISPAIFAS 158 P GP P L PRP HP++ + + + + A+ Sbjct: 3003 PTGPTPGLFPRPCHPSSTTSTALSTNATVMLAA 3035
>FINC_BOVIN (P07589) Fibronectin (FN)| Length = 2265 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -2 Query: 190 PMPATGSSLAELAKMAGLIGWIGASERAVGWR 95 P+ AT S+ E+ + ++ W+ AS+ G+R Sbjct: 689 PVVATSESVTEITASSFVVSWVSASDTVSGFR 720
>BAZ1A_XENLA (Q8UVR5) Bromodomain adjacent to zinc finger domain 1A| (ATP-utilizing chromatin assembly and remodely factor 1) (xACF1) (Fragment) Length = 627 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +2 Query: 44 QPVQLPRRPRAQLIAPPTPSHRSFARADPADQSGHLRQLSQARSGRRHGVRLL 202 +P R+PR+Q + P + + + L Q ++ SGR HGV L Sbjct: 455 EPTPPGRKPRSQSLLPSQAEPKGKGKKRLSGDISSLEQGNRRSSGRHHGVHEL 507
>SPTN5_HUMAN (Q9NRC6) Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta| chain 4) (Beta-V spectrin) (BSPECV) Length = 3674 Score = 27.7 bits (60), Expect = 8.5 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = +2 Query: 29 PHAGRQPV----QLPRRPRAQLIAPPTPSHRSFARADPADQSGHLRQLSQAR 172 PH+ R+ + RRP +L PP+PS D ++GH+R+L QAR Sbjct: 5 PHSPRELLGAAGHRSRRPSTELRVPPSPS----LTMDSQYETGHIRKL-QAR 51
>FINC_RAT (P04937) Fibronectin precursor (FN)| Length = 2477 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -2 Query: 190 PMPATGSSLAELAKMAGLIGWIGASERAVGWR 95 P+ AT S+ E+ + ++ W+ AS+ G+R Sbjct: 719 PVVATSESVTEITASSFVVSWVSASDTVSGFR 750
>FINC_MOUSE (P11276) Fibronectin precursor (FN)| Length = 2477 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -2 Query: 190 PMPATGSSLAELAKMAGLIGWIGASERAVGWR 95 P+ AT S+ E+ + ++ W+ AS+ G+R Sbjct: 719 PVVATSESVTEITASSFVVSWVSASDTVSGFR 750
>IRX1_HUMAN (P78414) Iroquois-class homeodomain protein IRX-1 (Iroquois| homeobox protein 1) (Homeodomain protein IRXA1) Length = 480 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 54 NSPAGPEPSL*PRPRHPTARSLAPIQPI 137 +SP PE L PRP P + +P QP+ Sbjct: 432 SSPTLPERDLVPRPDSPAQQLKSPFQPV 459 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,216,062 Number of Sequences: 219361 Number of extensions: 514468 Number of successful extensions: 2735 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2519 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2722 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
