>gb|U63085.1| Enterobacteria phage N15 primase (repA) gene, complete cds
          Length = 5353

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 141  ccggccatcttcgccagctcag 162
            ||||||||||||||||||||||
Sbjct: 5043 ccggccatcttcgccagctcag 5064

>gb|DQ391279.1| Cloning vector pJAZZ-KA, complete sequence
          Length = 14600

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 141  ccggccatcttcgccagctcag 162
            ||||||||||||||||||||||
Sbjct: 8958 ccggccatcttcgccagctcag 8979

>gb|AF064539.1|AF064539 Bacteriophage N15, complete genome
          Length = 46375

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 141   ccggccatcttcgccagctcag 162
             ||||||||||||||||||||||
Sbjct: 33760 ccggccatcttcgccagctcag 33781

>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    cagccaagctcgatccggtcg 180
              |||||||||||||||||||||
Sbjct: 800980 cagccaagctcgatccggtcg 801000

>gb|AE009553.1| Brucella melitensis 16M chromosome I, section 110 of 195 of the
            complete sequence
          Length = 11116

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 160  cagccaagctcgatccggtcg 180
            |||||||||||||||||||||
Sbjct: 8060 cagccaagctcgatccggtcg 8040

>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    cagccaagctcgatccggtcg 180
              |||||||||||||||||||||
Sbjct: 822660 cagccaagctcgatccggtcg 822680

>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence,
              strain 2308
          Length = 2121359

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    cagccaagctcgatccggtcg 180
              |||||||||||||||||||||
Sbjct: 818938 cagccaagctcgatccggtcg 818958

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 28      gccacatgccggccgtcagc 47
               ||||||||||||||||||||
Sbjct: 1048680 gccacatgccggccgtcagc 1048661

>emb|Y15036.1|MTANNEXIN Medicago truncatula mRNA for annexin
          Length = 1202

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 tccggccatcttcgccagct 159
           ||||||||||||||||||||
Sbjct: 449 tccggccatcttcgccagct 468

>emb|AJ312107.1|BTA312107 Bos taurus partial col1A1 gene for pro alpha 1(I) collagen, exon 2
          Length = 1828

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 84  tagccccgcccacgccatcccacc 107
           |||||||||||||||| |||||||
Sbjct: 966 tagccccgcccacgccgtcccacc 989

>emb|AJ307029.1|BTA307029 Bos taurus partial COL1A1 gene for pro alpha 1(I) collagen, exon 1
            and joined CDS
          Length = 5417

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 84   tagccccgcccacgccatcccacc 107
            |||||||||||||||| |||||||
Sbjct: 4897 tagccccgcccacgccgtcccacc 4920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 888,008
Number of Sequences: 3902068
Number of extensions: 888008
Number of successful extensions: 72911
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72587
Number of HSP's gapped (non-prelim): 324
length of query: 212
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 190
effective length of database: 17,147,199,772
effective search space: 3257967956680
effective search space used: 3257967956680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)