ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart09d09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 351 bits (177), Expect = 1e-93 Identities = 281/315 (89%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 116 gccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgc 175 |||||| ||||| ||||| ||||| ||| |||||||||| ||||| |||||||||||||| Sbjct: 51 gccggcgaaggcgccgtccatcgacgacgccatcgagacctacatcggcgccaccggcgc 110 Query: 176 cctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggt 235 | |||||| ||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 111 cgggcagctgttcaaggcgatcctgctggccttcgcgtgggccttcgacgcgcagcaggt 170 Query: 236 gttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccg---gcgccgacgc 292 ||||||||| |||||||| ||||||||||| || ||||||||||||| |||||||| | Sbjct: 171 gttcatctccgtgttcacggacgccgagccgcgctggcactgcaccgcaggcgccgaccc 230 Query: 293 gtcctgctcggctgccacggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtggga 352 |||||||||| | | | |||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 231 gtcctgctcgccgggcgcggcctcgccgtgcgcgctcccgcccggcgcgtgggcgtggga 290 Query: 353 ccgcccggccgtgacgtcggtgatctcggagtggtcgctcaagtgcgccggcccggcgct 412 ||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||||| Sbjct: 291 ccgcccggccgagacgtcggtggtctccgagtgggcgctcaagtgcgccggcccggcgct 350 Query: 413 cgtctccctcccggc 427 |||||| |||||||| Sbjct: 351 cgtctcgctcccggc 365
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 351 bits (177), Expect = 1e-93 Identities = 281/315 (89%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 116 gccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgc 175 |||||| ||||| ||||| ||||| ||| |||||||||| ||||| |||||||||||||| Sbjct: 22373398 gccggcgaaggcgccgtccatcgacgacgccatcgagacctacatcggcgccaccggcgc 22373457 Query: 176 cctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggt 235 | |||||| ||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 22373458 cgggcagctgttcaaggcgatcctgctggccttcgcgtgggccttcgacgcgcagcaggt 22373517 Query: 236 gttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccg---gcgccgacgc 292 ||||||||| |||||||| ||||||||||| || ||||||||||||| |||||||| | Sbjct: 22373518 gttcatctccgtgttcacggacgccgagccgcgctggcactgcaccgcaggcgccgaccc 22373577 Query: 293 gtcctgctcggctgccacggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtggga 352 |||||||||| | | | |||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 22373578 gtcctgctcgccgggcgcggcctcgccgtgcgcgctcccgcccggcgcgtgggcgtggga 22373637 Query: 353 ccgcccggccgtgacgtcggtgatctcggagtggtcgctcaagtgcgccggcccggcgct 412 ||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||||| Sbjct: 22373638 ccgcccggccgagacgtcggtggtctccgagtgggcgctcaagtgcgccggcccggcgct 22373697 Query: 413 cgtctccctcccggc 427 |||||| |||||||| Sbjct: 22373698 cgtctcgctcccggc 22373712 Score = 339 bits (171), Expect = 5e-90 Identities = 319/368 (86%), Gaps = 9/368 (2%) Strand = Plus / Minus Query: 69 atggctgacacggccgccgccccgctcctgacaagccacaaaacaaggccggccaaggca 128 ||||| ||| ||||| || ||||||| ||||| ||||| || ||| |||||||||||| Sbjct: 22404950 atggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggcg 22404891 Query: 129 ccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcctc 188 ||||| ||||| ||| |||||||||| ||||| ||||||||||||||| |||||| || Sbjct: 22404890 ccgtccatcgacgacgccatcgagacctacatcggcgccaccggcgccgggcagctgttc 22404831 Query: 189 aaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggtg 248 ||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 22404830 aaggcgatcctgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctccgtg 22404771 Query: 249 ttcaccgacgccgagcctcggtggcactgca---ccggcgccgacgcgtcctgctcggct 305 ||||| ||||||||||| || |||||||||| ||||||||||| ||||||||||| | Sbjct: 22404770 ttcacggacgccgagccgcgctggcactgcaccgccggcgccgacccgtcctgctcgccg 22404711 Query: 306 gccacggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtg 365 | | |||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 22404710 ggcgcggcctcgccgtgcgcgctcccgcccggcgcgtgggcgtgggaccgcccggccgag 22404651 Query: 366 acgtcggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctcc 419 ||||||||| | ||||||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 22404650 acgtcggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctcc 22404591 Query: 420 ctcccggc 427 |||||||| Sbjct: 22404590 ctcccggc 22404583 Score = 186 bits (94), Expect = 4e-44 Identities = 187/218 (85%) Strand = Plus / Plus Query: 68 aatggctgacacggccgccgccccgctcctgacaagccacaaaacaaggccggccaaggc 127 |||||| ||| ||||| || ||||||| ||||| ||||| || ||| |||||||||||| Sbjct: 22421037 aatggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggc 22421096 Query: 128 accgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcct 187 || ||| ||||| ||| |||||||||||||||| |||||||||||||||| ||||| || Sbjct: 22421097 actgtccatcgacgacgccatcgagacgtacatcggcgccaccggcgcccgccagctgct 22421156 Query: 188 caaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggt 247 || |||| |||||||||||||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 22421157 cacggccatgttgctggccttcgcttgggctttcgaggcgcagcaggtgttcatgtccgt 22421216 Query: 248 gttcaccgacgccgagcctcggtggcactgcaccggcg 285 |||||| ||||| ||||| |||||||||||||||| Sbjct: 22421217 gttcacggacgcggagcccacatggcactgcaccggcg 22421254 Score = 121 bits (61), Expect = 2e-24 Identities = 108/124 (87%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| ||| |||||||||||||| ||||| |||||| ||||||||||||||||| ||||| Sbjct: 22421306 cggcttcggcgtgcgcgctcccgcccggcacgtgggagtgggaccgcccggccgagacgt 22421365 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||||||| ||||||||| ||| ||||||||||||||||||||||| Sbjct: 22421366 cggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctccctcc 22421425 Query: 424 cggc 427 |||| Sbjct: 22421426 cggc 22421429
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 351 bits (177), Expect = 1e-93 Identities = 281/315 (89%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 116 gccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgc 175 |||||| ||||| ||||| ||||| ||| |||||||||| ||||| |||||||||||||| Sbjct: 178644 gccggcgaaggcgccgtccatcgacgacgccatcgagacctacatcggcgccaccggcgc 178703 Query: 176 cctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggt 235 | |||||| ||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 178704 cgggcagctgttcaaggcgatcctgctggccttcgcgtgggccttcgacgcgcagcaggt 178763 Query: 236 gttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccg---gcgccgacgc 292 ||||||||| |||||||| ||||||||||| || ||||||||||||| |||||||| | Sbjct: 178764 gttcatctccgtgttcacggacgccgagccgcgctggcactgcaccgcaggcgccgaccc 178823 Query: 293 gtcctgctcggctgccacggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtggga 352 |||||||||| | | | |||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 178824 gtcctgctcgccgggcgcggcctcgccgtgcgcgctcccgcccggcgcgtgggcgtggga 178883 Query: 353 ccgcccggccgtgacgtcggtgatctcggagtggtcgctcaagtgcgccggcccggcgct 412 ||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||||| Sbjct: 178884 ccgcccggccgagacgtcggtggtctccgagtgggcgctcaagtgcgccggcccggcgct 178943 Query: 413 cgtctccctcccggc 427 |||||| |||||||| Sbjct: 178944 cgtctcgctcccggc 178958
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 351 bits (177), Expect = 1e-93 Identities = 281/315 (89%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 116 gccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgc 175 |||||| ||||| ||||| ||||| ||| |||||||||| ||||| |||||||||||||| Sbjct: 34465 gccggcgaaggcgccgtccatcgacgacgccatcgagacctacatcggcgccaccggcgc 34524 Query: 176 cctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggt 235 | |||||| ||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 34525 cgggcagctgttcaaggcgatcctgctggccttcgcgtgggccttcgacgcgcagcaggt 34584 Query: 236 gttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccg---gcgccgacgc 292 ||||||||| |||||||| ||||||||||| || ||||||||||||| |||||||| | Sbjct: 34585 gttcatctccgtgttcacggacgccgagccgcgctggcactgcaccgcaggcgccgaccc 34644 Query: 293 gtcctgctcggctgccacggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtggga 352 |||||||||| | | | |||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 34645 gtcctgctcgccgggcgcggcctcgccgtgcgcgctcccgcccggcgcgtgggcgtggga 34704 Query: 353 ccgcccggccgtgacgtcggtgatctcggagtggtcgctcaagtgcgccggcccggcgct 412 ||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||||| Sbjct: 34705 ccgcccggccgagacgtcggtggtctccgagtgggcgctcaagtgcgccggcccggcgct 34764 Query: 413 cgtctccctcccggc 427 |||||| |||||||| Sbjct: 34765 cgtctcgctcccggc 34779 Score = 339 bits (171), Expect = 5e-90 Identities = 319/368 (86%), Gaps = 9/368 (2%) Strand = Plus / Minus Query: 69 atggctgacacggccgccgccccgctcctgacaagccacaaaacaaggccggccaaggca 128 ||||| ||| ||||| || ||||||| ||||| ||||| || ||| |||||||||||| Sbjct: 66017 atggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggcg 65958 Query: 129 ccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcctc 188 ||||| ||||| ||| |||||||||| ||||| ||||||||||||||| |||||| || Sbjct: 65957 ccgtccatcgacgacgccatcgagacctacatcggcgccaccggcgccgggcagctgttc 65898 Query: 189 aaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggtg 248 ||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 65897 aaggcgatcctgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctccgtg 65838 Query: 249 ttcaccgacgccgagcctcggtggcactgca---ccggcgccgacgcgtcctgctcggct 305 ||||| ||||||||||| || |||||||||| ||||||||||| ||||||||||| | Sbjct: 65837 ttcacggacgccgagccgcgctggcactgcaccgccggcgccgacccgtcctgctcgccg 65778 Query: 306 gccacggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtg 365 | | |||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 65777 ggcgcggcctcgccgtgcgcgctcccgcccggcgcgtgggcgtgggaccgcccggccgag 65718 Query: 366 acgtcggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctcc 419 ||||||||| | ||||||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 65717 acgtcggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctcc 65658 Query: 420 ctcccggc 427 |||||||| Sbjct: 65657 ctcccggc 65650 Score = 186 bits (94), Expect = 4e-44 Identities = 187/218 (85%) Strand = Plus / Plus Query: 68 aatggctgacacggccgccgccccgctcctgacaagccacaaaacaaggccggccaaggc 127 |||||| ||| ||||| || ||||||| ||||| ||||| || ||| |||||||||||| Sbjct: 82104 aatggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggc 82163 Query: 128 accgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcct 187 || ||| ||||| ||| |||||||||||||||| |||||||||||||||| ||||| || Sbjct: 82164 actgtccatcgacgacgccatcgagacgtacatcggcgccaccggcgcccgccagctgct 82223 Query: 188 caaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggt 247 || |||| |||||||||||||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 82224 cacggccatgttgctggccttcgcttgggctttcgaggcgcagcaggtgttcatgtccgt 82283 Query: 248 gttcaccgacgccgagcctcggtggcactgcaccggcg 285 |||||| ||||| ||||| |||||||||||||||| Sbjct: 82284 gttcacggacgcggagcccacatggcactgcaccggcg 82321 Score = 121 bits (61), Expect = 2e-24 Identities = 108/124 (87%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| ||| |||||||||||||| ||||| |||||| ||||||||||||||||| ||||| Sbjct: 82373 cggcttcggcgtgcgcgctcccgcccggcacgtgggagtgggaccgcccggccgagacgt 82432 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||||||| ||||||||| ||| ||||||||||||||||||||||| Sbjct: 82433 cggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctccctcc 82492 Query: 424 cggc 427 |||| Sbjct: 82493 cggc 82496
>ref|XM_478722.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 339 bits (171), Expect = 5e-90 Identities = 319/368 (86%), Gaps = 9/368 (2%) Strand = Plus / Plus Query: 69 atggctgacacggccgccgccccgctcctgacaagccacaaaacaaggccggccaaggca 128 ||||| ||| ||||| || ||||||| ||||| ||||| || ||| |||||||||||| Sbjct: 1 atggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggcg 60 Query: 129 ccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcctc 188 ||||| ||||| ||| |||||||||| ||||| ||||||||||||||| |||||| || Sbjct: 61 ccgtccatcgacgacgccatcgagacctacatcggcgccaccggcgccgggcagctgttc 120 Query: 189 aaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggtg 248 ||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 121 aaggcgatcctgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctccgtg 180 Query: 249 ttcaccgacgccgagcctcggtggcactgca---ccggcgccgacgcgtcctgctcggct 305 ||||| ||||||||||| || |||||||||| ||||||||||| ||||||||||| | Sbjct: 181 ttcacggacgccgagccgcgctggcactgcaccgccggcgccgacccgtcctgctcgccg 240 Query: 306 gccacggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtg 365 | | |||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 241 ggcgcggcctcgccgtgcgcgctcccgcccggcgcgtgggcgtgggaccgcccggccgag 300 Query: 366 acgtcggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctcc 419 ||||||||| | ||||||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 301 acgtcggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctcc 360 Query: 420 ctcccggc 427 |||||||| Sbjct: 361 ctcccggc 368
>ref|XM_478725.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1807 Score = 186 bits (94), Expect = 4e-44 Identities = 187/218 (85%) Strand = Plus / Plus Query: 68 aatggctgacacggccgccgccccgctcctgacaagccacaaaacaaggccggccaaggc 127 |||||| ||| ||||| || ||||||| ||||| ||||| || ||| |||||||||||| Sbjct: 58 aatggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggc 117 Query: 128 accgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcct 187 || ||| ||||| ||| |||||||||||||||| |||||||||||||||| ||||| || Sbjct: 118 actgtccatcgacgacgccatcgagacgtacatcggcgccaccggcgcccgccagctgct 177 Query: 188 caaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggt 247 || |||| |||||||||||||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 178 cacggccatgttgctggccttcgcttgggctttcgaggcgcagcaggtgttcatgtccgt 237 Query: 248 gttcaccgacgccgagcctcggtggcactgcaccggcg 285 |||||| ||||| ||||| |||||||||||||||| Sbjct: 238 gttcacggacgcggagcccacatggcactgcaccggcg 275 Score = 121 bits (61), Expect = 2e-24 Identities = 108/124 (87%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| ||| |||||||||||||| ||||| |||||| ||||||||||||||||| ||||| Sbjct: 327 cggcttcggcgtgcgcgctcccgcccggcacgtgggagtgggaccgcccggccgagacgt 386 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||||||| ||||||||| ||| ||||||||||||||||||||||| Sbjct: 387 cggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctccctcc 446 Query: 424 cggc 427 |||| Sbjct: 447 cggc 450
>dbj|AK072020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104C21, full insert sequence Length = 1807 Score = 186 bits (94), Expect = 4e-44 Identities = 187/218 (85%) Strand = Plus / Plus Query: 68 aatggctgacacggccgccgccccgctcctgacaagccacaaaacaaggccggccaaggc 127 |||||| ||| ||||| || ||||||| ||||| ||||| || ||| |||||||||||| Sbjct: 58 aatggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggc 117 Query: 128 accgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcct 187 || ||| ||||| ||| |||||||||||||||| |||||||||||||||| ||||| || Sbjct: 118 actgtccatcgacgacgccatcgagacgtacatcggcgccaccggcgcccgccagctgct 177 Query: 188 caaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggt 247 || |||| |||||||||||||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 178 cacggccatgttgctggccttcgcttgggctttcgaggcgcagcaggtgttcatgtccgt 237 Query: 248 gttcaccgacgccgagcctcggtggcactgcaccggcg 285 |||||| ||||| ||||| |||||||||||||||| Sbjct: 238 gttcacggacgcggagcccacatggcactgcaccggcg 275 Score = 121 bits (61), Expect = 2e-24 Identities = 108/124 (87%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| ||| |||||||||||||| ||||| |||||| ||||||||||||||||| ||||| Sbjct: 327 cggcttcggcgtgcgcgctcccgcccggcacgtgggagtgggaccgcccggccgagacgt 386 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||||||| ||||||||| ||| ||||||||||||||||||||||| Sbjct: 387 cggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctccctcc 446 Query: 424 cggc 427 |||| Sbjct: 447 cggc 450
>ref|NM_183862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 161 bits (81), Expect = 2e-36 Identities = 147/169 (86%) Strand = Plus / Plus Query: 117 ccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgcc 176 ||||||||||||||||| ||| | ||| |||||||| |||||| ||||||||||||||| Sbjct: 112 ccggccaaggcaccgtctatccacgacgccatcgaggtgtacatcggcgccaccggcgcc 171 Query: 177 ctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtg 236 | || || ||||||||| || ||||||||||||| ||||| |||||||||||||||||| Sbjct: 172 cgccaacttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtg 231 Query: 237 ttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| || |||||||| ||||| ||||| | |||||||||||||||| Sbjct: 232 ttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcg 280 Score = 81.8 bits (41), Expect = 2e-12 Identities = 103/124 (83%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| |||||||||||||||||| |||| |||||| ||||||||||| |||| ||||| Sbjct: 344 cggcttcgccgtgcgcgctcccgctcggcacgtgggagtgggaccgcctggccaagacgt 403 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||| ||| ||||||| | ||| |||||| |||||||||||||||| Sbjct: 404 cggtggtgtcggactgggcgctcaactgcagcggcggcggcccagcgctcgtctccctcc 463 Query: 424 cggc 427 |||| Sbjct: 464 cggc 467
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 161 bits (81), Expect = 2e-36 Identities = 147/169 (86%) Strand = Plus / Plus Query: 117 ccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgcc 176 ||||||||||||||||| ||| | ||| |||||||| |||||| ||||||||||||||| Sbjct: 12739865 ccggccaaggcaccgtctatccacgacgccatcgaggtgtacatcggcgccaccggcgcc 12739924 Query: 177 ctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtg 236 | || || ||||||||| || ||||||||||||| ||||| |||||||||||||||||| Sbjct: 12739925 cgccaacttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtg 12739984 Query: 237 ttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| || |||||||| ||||| ||||| | |||||||||||||||| Sbjct: 12739985 ttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcg 12740033 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 129 ccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcctc 188 ||||| ||||| ||| ||||||| ||||||| |||||||||||||||| ||||| ||| Sbjct: 12741448 ccgtccatcgacgacgtcatcgaggcgtacatcggcgccaccggcgcccgccagcttctc 12741507 Query: 189 aaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggtg 248 |||||| || ||||||||||||| ||||| ||||||||||||||||||||||| || ||| Sbjct: 12741508 aaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtg 12741567 Query: 249 ttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| ||||| ||||| | |||||||||||||||| Sbjct: 12741568 ttcacggacgcggagccgccatggcactgcaccggcg 12741604 Score = 109 bits (55), Expect = 8e-21 Identities = 99/113 (87%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 315 tcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgtcggtg 374 |||||||||||||||||| | ||| |||||| ||||||||||||||||| |||||||||| Sbjct: 12741673 tcgccgtgcgcgctcccgcctggcacgtgggagtgggaccgcccggccgagacgtcggtg 12741732 Query: 375 atctcggagtggtcgctcaagtgcgccggcccggcgctcgtctccctcccggc 427 | ||||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 12741733 gtgtcggactgggcactcaactg---cggcccggcgctcgtctccctcccggc 12741782 Score = 81.8 bits (41), Expect = 2e-12 Identities = 103/124 (83%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| |||||||||||||||||| |||| |||||| ||||||||||| |||| ||||| Sbjct: 12740097 cggcttcgccgtgcgcgctcccgctcggcacgtgggagtgggaccgcctggccaagacgt 12740156 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||| ||| ||||||| | ||| |||||| |||||||||||||||| Sbjct: 12740157 cggtggtgtcggactgggcgctcaactgcagcggcggcggcccagcgctcgtctccctcc 12740216 Query: 424 cggc 427 |||| Sbjct: 12740217 cggc 12740220 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 403 gcccggcgctcgtctccctcccggc 427 ||||||||||||||||||||||||| Sbjct: 35836570 gcccggcgctcgtctccctcccggc 35836546 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cggcccggcgctcgtctccctcccggc 427 ||||||||||||| ||||||||||||| Sbjct: 5386039 cggcccggcgctcatctccctcccggc 5386065 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Plus Query: 347 gtgggaccgcccggccgtgacgtcggtgatctcggagtggtcgctcaagtgcgccggc 404 ||||||||||||||||| || || ||| | | ||||||| |||||||||||| |||| Sbjct: 5385976 gtgggaccgcccggccgggatgttggttgtgttggagtggacgctcaagtgcggcggc 5386033
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 161 bits (81), Expect = 2e-36 Identities = 147/169 (86%) Strand = Plus / Plus Query: 117 ccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgcc 176 ||||||||||||||||| ||| | ||| |||||||| |||||| ||||||||||||||| Sbjct: 20264 ccggccaaggcaccgtctatccacgacgccatcgaggtgtacatcggcgccaccggcgcc 20323 Query: 177 ctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtg 236 | || || ||||||||| || ||||||||||||| ||||| |||||||||||||||||| Sbjct: 20324 cgccaacttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtg 20383 Query: 237 ttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| || |||||||| ||||| ||||| | |||||||||||||||| Sbjct: 20384 ttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcg 20432 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 129 ccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcctc 188 ||||| ||||| ||| ||||||| ||||||| |||||||||||||||| ||||| ||| Sbjct: 21847 ccgtccatcgacgacgtcatcgaggcgtacatcggcgccaccggcgcccgccagcttctc 21906 Query: 189 aaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggtg 248 |||||| || ||||||||||||| ||||| ||||||||||||||||||||||| || ||| Sbjct: 21907 aaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtg 21966 Query: 249 ttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| ||||| ||||| | |||||||||||||||| Sbjct: 21967 ttcacggacgcggagccgccatggcactgcaccggcg 22003 Score = 109 bits (55), Expect = 8e-21 Identities = 99/113 (87%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 315 tcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgtcggtg 374 |||||||||||||||||| | ||| |||||| ||||||||||||||||| |||||||||| Sbjct: 22072 tcgccgtgcgcgctcccgcctggcacgtgggagtgggaccgcccggccgagacgtcggtg 22131 Query: 375 atctcggagtggtcgctcaagtgcgccggcccggcgctcgtctccctcccggc 427 | ||||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 22132 gtgtcggactgggcactcaactg---cggcccggcgctcgtctccctcccggc 22181 Score = 81.8 bits (41), Expect = 2e-12 Identities = 103/124 (83%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| |||||||||||||||||| |||| |||||| ||||||||||| |||| ||||| Sbjct: 20496 cggcttcgccgtgcgcgctcccgctcggcacgtgggagtgggaccgcctggccaagacgt 20555 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||| ||| ||||||| | ||| |||||| |||||||||||||||| Sbjct: 20556 cggtggtgtcggactgggcgctcaactgcagcggcggcggcccagcgctcgtctccctcc 20615 Query: 424 cggc 427 |||| Sbjct: 20616 cggc 20619
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 161 bits (81), Expect = 2e-36 Identities = 147/169 (86%) Strand = Plus / Plus Query: 117 ccggccaaggcaccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgcc 176 ||||||||||||||||| ||| | ||| |||||||| |||||| ||||||||||||||| Sbjct: 106894 ccggccaaggcaccgtctatccacgacgccatcgaggtgtacatcggcgccaccggcgcc 106953 Query: 177 ctgcagctcctcaaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtg 236 | || || ||||||||| || ||||||||||||| ||||| |||||||||||||||||| Sbjct: 106954 cgccaacttctcaaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtg 107013 Query: 237 ttcatctcggtgttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| || |||||||| ||||| ||||| | |||||||||||||||| Sbjct: 107014 ttcatgtccgtgttcacggacgcggagccgccatggcactgcaccggcg 107062 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 129 ccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcctc 188 ||||| ||||| ||| ||||||| ||||||| |||||||||||||||| ||||| ||| Sbjct: 108477 ccgtccatcgacgacgtcatcgaggcgtacatcggcgccaccggcgcccgccagcttctc 108536 Query: 189 aaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggtg 248 |||||| || ||||||||||||| ||||| ||||||||||||||||||||||| || ||| Sbjct: 108537 aaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtg 108596 Query: 249 ttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| ||||| ||||| | |||||||||||||||| Sbjct: 108597 ttcacggacgcggagccgccatggcactgcaccggcg 108633 Score = 109 bits (55), Expect = 8e-21 Identities = 99/113 (87%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 315 tcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgtcggtg 374 |||||||||||||||||| | ||| |||||| ||||||||||||||||| |||||||||| Sbjct: 108702 tcgccgtgcgcgctcccgcctggcacgtgggagtgggaccgcccggccgagacgtcggtg 108761 Query: 375 atctcggagtggtcgctcaagtgcgccggcccggcgctcgtctccctcccggc 427 | ||||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 108762 gtgtcggactgggcactcaactg---cggcccggcgctcgtctccctcccggc 108811 Score = 81.8 bits (41), Expect = 2e-12 Identities = 103/124 (83%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 310 cggcatcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgt 369 |||| |||||||||||||||||| |||| |||||| ||||||||||| |||| ||||| Sbjct: 107126 cggcttcgccgtgcgcgctcccgctcggcacgtgggagtgggaccgcctggccaagacgt 107185 Query: 370 cggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctccctcc 423 ||||| | ||||| ||| ||||||| | ||| |||||| |||||||||||||||| Sbjct: 107186 cggtggtgtcggactgggcgctcaactgcagcggcggcggcccagcgctcgtctccctcc 107245 Query: 424 cggc 427 |||| Sbjct: 107246 cggc 107249
>ref|NM_183863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1626 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 129 ccgtcgatcgatgacaccatcgagacgtacatgggcgccaccggcgccctgcagctcctc 188 ||||| ||||| ||| ||||||| ||||||| |||||||||||||||| ||||| ||| Sbjct: 52 ccgtccatcgacgacgtcatcgaggcgtacatcggcgccaccggcgcccgccagcttctc 111 Query: 189 aaggccgtgttgctggccttcgcgtgggccttcgacgcgcagcaggtgttcatctcggtg 248 |||||| || ||||||||||||| ||||| ||||||||||||||||||||||| || ||| Sbjct: 112 aaggccatgctgctggccttcgcttgggctttcgacgcgcagcaggtgttcatgtccgtg 171 Query: 249 ttcaccgacgccgagcctcggtggcactgcaccggcg 285 ||||| ||||| ||||| | |||||||||||||||| Sbjct: 172 ttcacggacgcggagccgccatggcactgcaccggcg 208 Score = 109 bits (55), Expect = 8e-21 Identities = 99/113 (87%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 315 tcgccgtgcgcgctcccgtccggcgcgtgggcgtgggaccgcccggccgtgacgtcggtg 374 |||||||||||||||||| | ||| |||||| ||||||||||||||||| |||||||||| Sbjct: 277 tcgccgtgcgcgctcccgcctggcacgtgggagtgggaccgcccggccgagacgtcggtg 336 Query: 375 atctcggagtggtcgctcaagtgcgccggcccggcgctcgtctccctcccggc 427 | ||||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 337 gtgtcggactgggcactcaactg---cggcccggcgctcgtctccctcccggc 386
>ref|NM_190486.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 403 gcccggcgctcgtctccctcccggc 427 ||||||||||||||||||||||||| Sbjct: 713 gcccggcgctcgtctccctcccggc 737
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 403 gcccggcgctcgtctccctcccggc 427 ||||||||||||||||||||||||| Sbjct: 101028 gcccggcgctcgtctccctcccggc 101004
>ref|NM_188270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cggcccggcgctcgtctccctcccggc 427 ||||||||||||| ||||||||||||| Sbjct: 846 cggcccggcgctcatctccctcccggc 872 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Plus Query: 347 gtgggaccgcccggccgtgacgtcggtgatctcggagtggtcgctcaagtgcgccggc 404 ||||||||||||||||| || || ||| | | ||||||| |||||||||||| |||| Sbjct: 783 gtgggaccgcccggccgggatgttggttgtgttggagtggacgctcaagtgcggcggc 840
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cggcccggcgctcgtctccctcccggc 427 |||||||| |||||||||||||||||| Sbjct: 49694 cggcccggtgctcgtctccctcccggc 49720
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.094 Identities = 55/66 (83%), Gaps = 6/66 (9%) Strand = Plus / Plus Query: 365 gacgtcggtgatctcggagtggtcgctcaagtg------cgccggcccggcgctcgtctc 418 |||||||||| | ||||||||| |||||||||| || |||||| ||||||||||| Sbjct: 4674908 gacgtcggtggtgtcggagtgggcgctcaagtgcagcggcggcggccccgcgctcgtctc 4674967 Query: 419 cctccc 424 |||||| Sbjct: 4674968 cctccc 4674973
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cggcccggcgctcgtctccctcccggc 427 |||||||| |||||||||||||||||| Sbjct: 14102139 cggcccggtgctcgtctccctcccggc 14102165
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cggcccggcgctcgtctccctcccggc 427 ||||||||||||| ||||||||||||| Sbjct: 137383 cggcccggcgctcatctccctcccggc 137409 Score = 44.1 bits (22), Expect = 0.37 Identities = 49/58 (84%) Strand = Plus / Plus Query: 347 gtgggaccgcccggccgtgacgtcggtgatctcggagtggtcgctcaagtgcgccggc 404 ||||||||||||||||| || || ||| | | ||||||| |||||||||||| |||| Sbjct: 137320 gtgggaccgcccggccgggatgttggttgtgttggagtggacgctcaagtgcggcggc 137377
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.094 Identities = 55/66 (83%), Gaps = 6/66 (9%) Strand = Plus / Plus Query: 365 gacgtcggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctc 418 |||||||||| | ||||||||| ||||||||| ||| |||||| ||||||||||| Sbjct: 4674889 gacgtcggtggtgtcggagtgggcgctcaagtgcagcggcggcggccccgcgctcgtctc 4674948 Query: 419 cctccc 424 |||||| Sbjct: 4674949 cctccc 4674954
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 46.1 bits (23), Expect = 0.094 Identities = 55/66 (83%), Gaps = 6/66 (9%) Strand = Plus / Minus Query: 365 gacgtcggtgatctcggagtggtcgctcaagt------gcgccggcccggcgctcgtctc 418 |||||||||| | ||||||||| ||||||||| ||| |||||| ||||||||||| Sbjct: 77219 gacgtcggtggtgtcggagtgggcgctcaagtgcagcggcggcggccccgcgctcgtctc 77160 Query: 419 cctccc 424 |||||| Sbjct: 77159 cctccc 77154
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ggcccggcgctcgtctccctcccggc 427 ||||||||||||||||||||| |||| Sbjct: 4171131 ggcccggcgctcgtctccctctcggc 4171156 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cgtccggcgcgtgggcgtggg 351 ||||||||||||||||||||| Sbjct: 11546842 cgtccggcgcgtgggcgtggg 11546862
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ggcccggcgctcgtctccctcccggc 427 ||||||||||||||||||||| |||| Sbjct: 16352 ggcccggcgctcgtctccctctcggc 16377
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ggcccggcgctcgtctccctcccggc 427 ||||||||||||||||||||| |||| Sbjct: 104390 ggcccggcgctcgtctccctctcggc 104415
>dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynthetic gene cluster, complete cds Length = 27448 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 atctcggtgttcaccgacgcc 260 ||||||||||||||||||||| Sbjct: 17527 atctcggtgttcaccgacgcc 17547
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 cggtgttcaccgacgccgagc 264 ||||||||||||||||||||| Sbjct: 940397 cggtgttcaccgacgccgagc 940377
>dbj|AP006054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417E03 Length = 133019 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cgtccggcgcgtgggcgtggg 351 ||||||||||||||||||||| Sbjct: 116085 cgtccggcgcgtgggcgtggg 116105
>dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0414E10 Length = 141760 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cgtccggcgcgtgggcgtggg 351 ||||||||||||||||||||| Sbjct: 24728 cgtccggcgcgtgggcgtggg 24748
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cacggccgccgccccgctcc 96 |||||||||||||||||||| Sbjct: 2362699 cacggccgccgccccgctcc 2362718
>ref|NM_187740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2655 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 1747 gcgccgacgcgtcctgctcg 1728
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 3496514 gcgccgacgcgtcctgctcg 3496533
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 13861 gcgccgacgcgtcctgctcg 13842
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 3496625 gcgccgacgcgtcctgctcg 3496644
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tcccgtccggcgcgtgggcg 347 |||||||||||||||||||| Sbjct: 362729 tcccgtccggcgcgtgggcg 362710
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 14167 gcgccgacgcgtcctgctcg 14186
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cccggccgtgacgtcggtga 375 |||||||||||||||||||| Sbjct: 5224984 cccggccgtgacgtcggtga 5225003
>emb|BX005320.4| Zebrafish DNA sequence from clone DKEY-27P3, complete sequence Length = 142827 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgccctgcagctcctcaagg 192 |||||||||||||||||||| Sbjct: 81401 cgccctgcagctcctcaagg 81420
>dbj|AK105752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C01, full insert sequence Length = 2414 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 1169 gcgccgacgcgtcctgctcg 1150
>dbj|AK099829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D06, full insert sequence Length = 2698 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 1411 gcgccgacgcgtcctgctcg 1392
>dbj|AK068034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131E13, full insert sequence Length = 2636 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcgccgacgcgtcctgctcg 302 |||||||||||||||||||| Sbjct: 1349 gcgccgacgcgtcctgctcg 1330
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cttcgcgtgggccttcgacg 225 |||||||||||||||||||| Sbjct: 2324574 cttcgcgtgggccttcgacg 2324555
>gb|L12157.1|SOYIDH Glycine max NADP-specific isocitrate dehydrogenase (idh1) mRNA, 3' end Length = 1560 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gctcggctgccacggcatcg 317 |||||||||||||||||||| Sbjct: 1305 gctcggctgccacggcatcg 1286 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,340,379 Number of Sequences: 3902068 Number of extensions: 2340379 Number of successful extensions: 51604 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50244 Number of HSP's gapped (non-prelim): 1342 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
