>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)|
          Length = 657

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 190 TSAAASD*SSWVRRTALGGPWSSEVVSRTR 101
           T+AA  + ++ VRRTA G   +S+VVS TR
Sbjct: 386 TAAALDELTATVRRTAAGARQASDVVSTTR 415

>DNAE2_COREF (Q8FRX6) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1073

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +3

Query: 306 GISHHRGAFSGPGEVRDHPAFDVVPTELAR 395
           G   H G  SG   + D P  DVVPTE AR
Sbjct: 525 GQPRHLGIHSGGMVICDRPIADVVPTEWAR 554

>SYS_HUMAN (P49591) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 513

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 111 ETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALLTPAVAVDEGVLRLPSHR 260
           E   DD+  P  VL   D  +DA A + +  +    + +DE +L+  + R
Sbjct: 71  EPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAER 120

>ZN446_HUMAN (Q9NWS9) Zinc finger protein 446|
          Length = 450

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 24/98 (24%), Positives = 31/98 (31%), Gaps = 16/98 (16%)
 Frame = +3

Query: 99  CRVLETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALLTPAVAVDEGVLRLPSHRRP---- 266
           CR L + ++ +GPP             AA   L    TPA  V  G   +P+   P    
Sbjct: 262 CRSLRSGNESEGPPGCPEAQPPQGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETR 321

Query: 267 ------------CXXXXXXXXXXXXGISHHRGAFSGPG 344
                       C             + HHR   SGPG
Sbjct: 322 LEPAATPRKPYTCEQCGRGFDWKSVFVIHHRTHTSGPG 359


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,728,000
Number of Sequences: 219361
Number of extensions: 550662
Number of successful extensions: 1658
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)