ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart09d01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 222 bits (112), Expect = 9e-55 Identities = 205/236 (86%) Strand = Plus / Minus Query: 140 cgacctggggaacatcggcgtgtgccacggccgcgtgggcggcaacctgccggcccctga 199 ||||| ||| || |||||| | |||||||||||||| ||| ||||||| || | || | Sbjct: 20638176 cgacccgggcaagatcggcatttgccacggccgcgtcggcagcaaccttccacctccggc 20638117 Query: 200 ggcggccgcggcgctgctgaggagtaacgggatcgccaaggcgcggctcttcctccccga 259 ||| || |||||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 20638116 ggccgcggcggcgttgctgaggcagaacgggatcaccaaggcgcggctcttcctccccga 20638057 Query: 260 cccggccgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgcccaa 319 |||||| ||||||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 20638056 cccggcggtgctcccggcgttcgccgccgccgggatcgacctcatggtcggcgtgcccaa 20637997 Query: 320 cgagaacctcaccttcctctccgcgtccgggcccgacggcgcgctgcagtggctgc 375 |||||||||||||||||||||||| | ||||||||||||||||| | |||||||| Sbjct: 20637996 cgagaacctcaccttcctctccgccgcggggcccgacggcgcgctccggtggctgc 20637941 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 420 tacctcgtcgtcggcaacgaggtgctctacaacaaccagttctacgcgccgcacctggtg 479 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20637899 tacctcgccgtcggcaacgaggtgctgtacaacaaccagttctacgcgccgcacctggtg 20637840 Query: 480 ccggccatgcggaacctgcacgccgcgctggcgtccctcgggctcg 525 || ||||||| ||||||||||||||||| | |||||||| |||| Sbjct: 20637839 cccgccatgcacaacctgcacgccgcgctcgtctccctcggcctcg 20637794
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 222 bits (112), Expect = 9e-55 Identities = 205/236 (86%) Strand = Plus / Minus Query: 140 cgacctggggaacatcggcgtgtgccacggccgcgtgggcggcaacctgccggcccctga 199 ||||| ||| || |||||| | |||||||||||||| ||| ||||||| || | || | Sbjct: 31787 cgacccgggcaagatcggcatttgccacggccgcgtcggcagcaaccttccacctccggc 31728 Query: 200 ggcggccgcggcgctgctgaggagtaacgggatcgccaaggcgcggctcttcctccccga 259 ||| || |||||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 31727 ggccgcggcggcgttgctgaggcagaacgggatcaccaaggcgcggctcttcctccccga 31668 Query: 260 cccggccgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgcccaa 319 |||||| ||||||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 31667 cccggcggtgctcccggcgttcgccgccgccgggatcgacctcatggtcggcgtgcccaa 31608 Query: 320 cgagaacctcaccttcctctccgcgtccgggcccgacggcgcgctgcagtggctgc 375 |||||||||||||||||||||||| | ||||||||||||||||| | |||||||| Sbjct: 31607 cgagaacctcaccttcctctccgccgcggggcccgacggcgcgctccggtggctgc 31552 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 420 tacctcgtcgtcggcaacgaggtgctctacaacaaccagttctacgcgccgcacctggtg 479 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 31510 tacctcgccgtcggcaacgaggtgctgtacaacaaccagttctacgcgccgcacctggtg 31451 Query: 480 ccggccatgcggaacctgcacgccgcgctggcgtccctcgggctcg 525 || ||||||| ||||||||||||||||| | |||||||| |||| Sbjct: 31450 cccgccatgcacaacctgcacgccgcgctcgtctccctcggcctcg 31405
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 222 bits (112), Expect = 9e-55 Identities = 205/236 (86%) Strand = Plus / Minus Query: 140 cgacctggggaacatcggcgtgtgccacggccgcgtgggcggcaacctgccggcccctga 199 ||||| ||| || |||||| | |||||||||||||| ||| ||||||| || | || | Sbjct: 103834 cgacccgggcaagatcggcatttgccacggccgcgtcggcagcaaccttccacctccggc 103775 Query: 200 ggcggccgcggcgctgctgaggagtaacgggatcgccaaggcgcggctcttcctccccga 259 ||| || |||||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 103774 ggccgcggcggcgttgctgaggcagaacgggatcaccaaggcgcggctcttcctccccga 103715 Query: 260 cccggccgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgcccaa 319 |||||| ||||||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 103714 cccggcggtgctcccggcgttcgccgccgccgggatcgacctcatggtcggcgtgcccaa 103655 Query: 320 cgagaacctcaccttcctctccgcgtccgggcccgacggcgcgctgcagtggctgc 375 |||||||||||||||||||||||| | ||||||||||||||||| | |||||||| Sbjct: 103654 cgagaacctcaccttcctctccgccgcggggcccgacggcgcgctccggtggctgc 103599 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 420 tacctcgtcgtcggcaacgaggtgctctacaacaaccagttctacgcgccgcacctggtg 479 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 103557 tacctcgccgtcggcaacgaggtgctgtacaacaaccagttctacgcgccgcacctggtg 103498 Query: 480 ccggccatgcggaacctgcacgccgcgctggcgtccctcgggctcg 525 || ||||||| ||||||||||||||||| | |||||||| |||| Sbjct: 103497 cccgccatgcacaacctgcacgccgcgctcgtctccctcggcctcg 103452
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 477 gtgccggccatgcggaacctgcacgccgcgctggcg 512 |||||||| ||||||||||||||||||||||||||| Sbjct: 19466849 gtgccggcgatgcggaacctgcacgccgcgctggcg 19466884
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 477 gtgccggccatgcggaacctgcacgccgcgctggcg 512 |||||||| ||||||||||||||||||||||||||| Sbjct: 85258 gtgccggcgatgcggaacctgcacgccgcgctggcg 85293
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 gtgccggccatgcggaacctgcacgccgcgctggc 511 |||||||||||||||||||||||||| |||||||| Sbjct: 56824 gtgccggccatgcggaacctgcacgcggcgctggc 56790
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 gtgccggccatgcggaacctgcacgccgcgctggc 511 |||||||||||||||||||||||||| |||||||| Sbjct: 34850711 gtgccggccatgcggaacctgcacgcggcgctggc 34850677
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 gtgccggccatgcggaacctgcacgccgcgctggc 511 |||||||||||||||||||||||||| |||||||| Sbjct: 30322 gtgccggccatgcggaacctgcacgcggcgctggc 30288
>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete sequence Length = 110682 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 477 gtgccggccatgcggaacctgcacgccgcgctggc 511 |||||||||||||||||||||||||| |||||||| Sbjct: 104398 gtgccggccatgcggaacctgcacgcggcgctggc 104364
>ref|XM_478552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1785 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 474 ctggtgccggccatgcggaacctgcacgccgcgctggcg 512 ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 459 ctggtgccggccatgaggaacgtgcacgcggcgctggcg 497
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 474 ctggtgccggccatgcggaacctgcacgccgcgctggcg 512 ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 21098169 ctggtgccggccatgaggaacgtgcacgcggcgctggcg 21098131
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 474 ctggtgccggccatgcggaacctgcacgccgcgctggcg 512 ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 19530 ctggtgccggccatgaggaacgtgcacgcggcgctggcg 19492
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 474 ctggtgccggccatgcggaacctgcacgccgcgctggcg 512 ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 141468 ctggtgccggccatgaggaacgtgcacgcggcgctggcg 141430
>dbj|AK102329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090M12, full insert sequence Length = 1982 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 474 ctggtgccggccatgcggaacctgcacgccgcgctggcg 512 ||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 459 ctggtgccggccatgaggaacgtgcacgcggcgctggcg 497
>ref|XM_364800.1| Magnaporthe grisea 70-15 hypothetical protein (MG09645.4) partial mRNA Length = 6354 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 487 tgcggaacctgcacgccgcgctggc 511 ||||||||||||||||||||||||| Sbjct: 5324 tgcggaacctgcacgccgcgctggc 5348
>ref|XM_480882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 264 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 gctcgccgcggcggccggcgccg 141 ||||||||||||||||||||||| Sbjct: 45 gctcgccgcggcggccggcgccg 67
>ref|XM_480883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 982 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 gctcgccgcggcggccggcgccg 141 ||||||||||||||||||||||| Sbjct: 60 gctcgccgcggcggccggcgccg 82
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 424 tcgtcgtcggcaacgaggtgctc 446 ||||||||||||||||||||||| Sbjct: 3492463 tcgtcgtcggcaacgaggtgctc 3492441 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 gctcgccgcggcggccggcgccgac 143 |||||||||| |||||||||||||| Sbjct: 3223732 gctcgccgcgccggccggcgccgac 3223756
>ref|NM_190897.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 873 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cctcgctgctcgccgcggcggcc 134 ||||||||||||||||||||||| Sbjct: 839 cctcgctgctcgccgcggcggcc 861
>ref|NM_190895.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 297 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cctcgctgctcgccgcggcggcc 134 ||||||||||||||||||||||| Sbjct: 263 cctcgctgctcgccgcggcggcc 285
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 65 cacagcggcagcggcgtcgccaa 87 ||||||||||||||||||||||| Sbjct: 1950980 cacagcggcagcggcgtcgccaa 1950958 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tcgccgcggcggccggcgcc 140 |||||||||||||||||||| Sbjct: 2936562 tcgccgcggcggccggcgcc 2936581
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 gctcgccgcggcggccggcgccg 141 ||||||||||||||||||||||| Sbjct: 8405770 gctcgccgcggcggccggcgccg 8405792
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cctcgctgctcgccgcggcggcc 134 ||||||||||||||||||||||| Sbjct: 33702259 cctcgctgctcgccgcggcggcc 33702281 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cctcgctgctcgccgcggcggcc 134 ||||||||||||||||||||||| Sbjct: 33692691 cctcgctgctcgccgcggcggcc 33692713
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 gctcgccgcggcggccggcgccg 141 ||||||||||||||||||||||| Sbjct: 21487 gctcgccgcggcggccggcgccg 21509
>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699H05 Length = 144850 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cctcgctgctcgccgcggcggcc 134 ||||||||||||||||||||||| Sbjct: 55329 cctcgctgctcgccgcggcggcc 55351 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cctcgctgctcgccgcggcggcc 134 ||||||||||||||||||||||| Sbjct: 45761 cctcgctgctcgccgcggcggcc 45783
>dbj|AK111059.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-D05, full insert sequence Length = 555 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cctcgctgctcgccgcggcggcc 134 ||||||||||||||||||||||| Sbjct: 306 cctcgctgctcgccgcggcggcc 328
>dbj|AK059758.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E06, full insert sequence Length = 980 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 119 gctcgccgcggcggccggcgccg 141 ||||||||||||||||||||||| Sbjct: 60 gctcgccgcggcggccggcgccg 82
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 109 tggcctcgctgctcgccgcggcggccggcgccgac 143 ||||| |||||| |||||||||||||| ||||||| Sbjct: 3451514 tggccgcgctgcgcgccgcggcggccgacgccgac 3451480 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcggcggccggcgccgacc 144 |||||||||||||||||||| Sbjct: 4349097 cgcggcggccggcgccgacc 4349116 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 114 tcgctgctcgccgcggcggccggcgccg 141 |||||||| ||||| ||||||||||||| Sbjct: 2188537 tcgctgctggccgccgcggccggcgccg 2188510 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgccgcggcggccggcgccg 141 |||||||||||||||||||| Sbjct: 1926791 cgccgcggcggccggcgccg 1926772
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 ctcgccgcggcggccggcgccg 141 |||||||||||||||||||||| Sbjct: 93417 ctcgccgcggcggccggcgccg 93396 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgctcgccgcggcggccggcg 138 ||||||||||||||||||||| Sbjct: 75116 tgctcgccgcggcggccggcg 75096
>gb|AY047606.1| Sorghum bicolor beta-1,3-glucanase mRNA, partial cds Length = 939 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 482 ggccatgcggaacctgcacgccgcgctggcgtcc 515 |||||||| |||| ||||||||||||| |||||| Sbjct: 393 ggccatgcagaacgtgcacgccgcgctcgcgtcc 426
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 ctcgccgcggcggccggcgccg 141 |||||||||||||||||||||| Sbjct: 9656260 ctcgccgcggcggccggcgccg 9656281 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tgctcgccgcggcggccggcg 138 ||||||||||||||||||||| Sbjct: 9674561 tgctcgccgcggcggccggcg 9674581
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 107 cctggcctcgctgctcgccgcggcggccggcgcc 140 ||||||| |||||||||||||||||||| |||| Sbjct: 3497311 cctggcccggctgctcgccgcggcggccgacgcc 3497344 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 gctcgccgcggcggccggcgccgacctgg 147 |||||||||||||| ||| |||||||||| Sbjct: 2444120 gctcgccgcggcgggcggtgccgacctgg 2444092 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 gctgctcgccgcggcggccggcgc 139 ||||||||||||||| |||||||| Sbjct: 127379 gctgctcgccgcggccgccggcgc 127356
>dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G07, full insert sequence Length = 938 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 ctcgccgcggcggccggcgccg 141 |||||||||||||||||||||| Sbjct: 49 ctcgccgcggcggccggcgccg 70
>dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100O03, full insert sequence Length = 896 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 ctcgccgcggcggccggcgccg 141 |||||||||||||||||||||| Sbjct: 64 ctcgccgcggcggccggcgccg 85
>dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071C10, full insert sequence Length = 954 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 ctcgccgcggcggccggcgccg 141 |||||||||||||||||||||| Sbjct: 53 ctcgccgcggcggccggcgccg 74
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 ctcgccgcggcggccggcgccg 141 |||||||||||||||||||||| Sbjct: 9727957 ctcgccgcggcggccggcgccg 9727978 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tgctcgccgcggcggccggcg 138 ||||||||||||||||||||| Sbjct: 9746258 tgctcgccgcggcggccggcg 9746278
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 tcaccgtcggcgtgcccaacg 321 ||||||||||||||||||||| Sbjct: 2104246 tcaccgtcggcgtgcccaacg 2104226
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 ggcccgacggcgcgctgcagt 369 ||||||||||||||||||||| Sbjct: 282976 ggcccgacggcgcgctgcagt 282956 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tgctcgccgcggcggccggc 137 |||||||||||||||||||| Sbjct: 2262683 tgctcgccgcggcggccggc 2262664
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 gctcgccgcgggcccagtcgccggacggc 414 ||||||||| |||||||||||||| |||| Sbjct: 978407 gctcgccgccggcccagtcgccgggcggc 978379
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 ccttcgccgcggccggcatcg 297 ||||||||||||||||||||| Sbjct: 63971 ccttcgccgcggccggcatcg 63991
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 tcgccgcggcggccggcgccg 141 ||||||||||||||||||||| Sbjct: 277127 tcgccgcggcggccggcgccg 277147
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 ggcccgacggcgcgctgcagt 369 ||||||||||||||||||||| Sbjct: 1608771 ggcccgacggcgcgctgcagt 1608751
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctgctcgccgcggcggccggcgccg 141 ||||||||||||||||||| ||||| Sbjct: 48222 ctgctcgccgcggcggccgccgccg 48246
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 cctcgtcgtcggcaacgaggt 442 ||||||||||||||||||||| Sbjct: 3565306 cctcgtcgtcggcaacgaggt 3565286
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cggccggcatcgacctcaccg 306 ||||||||||||||||||||| Sbjct: 1322952 cggccggcatcgacctcaccg 1322972
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 ctccgcgtccgggcccgacgg 358 ||||||||||||||||||||| Sbjct: 7173179 ctccgcgtccgggcccgacgg 7173159 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ctcccggccttcgccgcggc 289 |||||||||||||||||||| Sbjct: 4527298 ctcccggccttcgccgcggc 4527279
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 ctcgccgcggcggccggcgccgacc 144 ||||||||||| ||||||||||||| Sbjct: 3550478 ctcgccgcggccgccggcgccgacc 3550454 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ccgggcccgacggcgcgctgc 366 ||||||||||||||||||||| Sbjct: 2154749 ccgggcccgacggcgcgctgc 2154729 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 tcgtcgtcggcaacgaggtgctct 447 ||||||||||||||||||| |||| Sbjct: 1973795 tcgtcgtcggcaacgaggtcctct 1973772 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 ctgctcgccgcggcggccggcgccgacc 144 |||| |||||| |||||||||||||||| Sbjct: 1836569 ctgcgcgccgccgcggccggcgccgacc 1836542 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgccgcggcggccggcgccg 141 |||||||||||||||||||| Sbjct: 1325837 cgccgcggcggccggcgccg 1325856
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ccggccttcgccgcggccggcatcg 297 |||| |||||||||||||||||||| Sbjct: 5760544 ccggtcttcgccgcggccggcatcg 5760568
>dbj|AK104657.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D03, full insert sequence Length = 1036 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tgctcgccgcggcggccggcg 138 ||||||||||||||||||||| Sbjct: 68 tgctcgccgcggcggccggcg 88
>dbj|AK059739.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-F02, full insert sequence Length = 1044 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tgctcgccgcggcggccggcg 138 ||||||||||||||||||||| Sbjct: 68 tgctcgccgcggcggccggcg 88
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gctcgccgcggcggccggcgc 139 ||||||||||||||||||||| Sbjct: 2008551 gctcgccgcggcggccggcgc 2008531
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgccgcggcggccggcgccg 141 |||||||||||||||||||| Sbjct: 113593 cgccgcggcggccggcgccg 113612
>ref|XM_463110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1329 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgccgcggcggccggcgccg 141 |||||||||||||||||||| Sbjct: 216 cgccgcggcggccggcgccg 235
>ref|XM_470403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 tacctcgtcgtcggcaacgaggtgctct 447 |||||| |||||||||||||||| |||| Sbjct: 340 tacctcttcgtcggcaacgaggtcctct 367
>ref|NM_184593.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1224 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 cctgaggcggccgcggcgctgctg 218 |||| ||||||||||||||||||| Sbjct: 783 cctgcggcggccgcggcgctgctg 760
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cgtcggcaacgaggtgctct 447 |||||||||||||||||||| Sbjct: 110861 cgtcggcaacgaggtgctct 110842
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence Length = 130987 Score = 40.1 bits (20), Expect = 7.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 266 cgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgccc 317 |||||||| |||||||||| |||| ||||| ||||||||||||||||| Sbjct: 64375 cgtgctccgcgccttcgccggctccggggtcgacttcaccgtcggcgtgccc 64324
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cgtcggcaacgaggtgctct 447 |||||||||||||||||||| Sbjct: 150088 cgtcggcaacgaggtgctct 150069
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ccgtgctcccggccttcgccgcgg 288 |||||||| ||||||||||||||| Sbjct: 477992 ccgtgctcacggccttcgccgcgg 478015
>gb|AY626367.1| Edwardsiella ictaluri clone pBK195CD hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 5094 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gctcgccgcggcggccggcg 138 |||||||||||||||||||| Sbjct: 3921 gctcgccgcggcggccggcg 3940
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 tacctcgtcgtcggcaacgaggtgctct 447 |||||| |||||||||||||||| |||| Sbjct: 35256954 tacctcttcgtcggcaacgaggtcctct 35256927 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgccgcggcggccggcgccg 141 |||||||||||||||||||| Sbjct: 22554553 cgccgcggcggccggcgccg 22554534 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cctgaggcggccgcggcgctgctg 218 |||| ||||||||||||||||||| Sbjct: 14376994 cctgcggcggccgcggcgctgctg 14377017
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 tacctcgtcgtcggcaacgaggtgctct 447 |||||| |||||||||||||||| |||| Sbjct: 135715 tacctcttcgtcggcaacgaggtcctct 135688
>gb|AF152394.2| Mycobacterium avium hypothetical protein, beta-lactamase-like protein (bllp), F420-dependent glucose-6-phosphate dehydrogenase (fgd), phospotransacetylase (pta), acetate kinase (ack), and hypothetical proteins genes, complete cds; and unknown gene Length = 7849 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcggcggccggcgccgacc 144 |||||||||||||||||||| Sbjct: 5909 cgcggcggccggcgccgacc 5928
>ref|XM_816837.1| Trypanosoma cruzi strain CL Brener serine/threonine protein phosphatase (Tc00.1047053506529.380) partial mRNA Length = 2772 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ctcgtcgtcggcaacgaggt 442 |||||||||||||||||||| Sbjct: 2073 ctcgtcgtcggcaacgaggt 2054
>gb|AC137988.2| Trypanosoma cruzi strain Brener chromosome 3 clone cosmids 1o17, 1m17, 1b21, 2n11, complete sequence Length = 105864 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ctcgtcgtcggcaacgaggt 442 |||||||||||||||||||| Sbjct: 85051 ctcgtcgtcggcaacgaggt 85032
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gccgcggcggccggcgccga 142 |||||||||||||||||||| Sbjct: 58686 gccgcggcggccggcgccga 58667
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 106 tcctggcctcgctgctcgccgcggcggccggc 137 |||||||||||||||| || |||| ||||||| Sbjct: 197032 tcctggcctcgctgctggcggcggtggccggc 197063
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gccgcggcggccggcgccga 142 |||||||||||||||||||| Sbjct: 11490 gccgcggcggccggcgccga 11471
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 106 tcctggcctcgctgctcgccgcggcggccggc 137 |||||||||||||||| || |||| ||||||| Sbjct: 321077 tcctggcctcgctgctggcggcggtggccggc 321108
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gccgcggcggccggcgccga 142 |||||||||||||||||||| Sbjct: 128691 gccgcggcggccggcgccga 128672
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggcagcggcgtcgccaatgcgttt 94 ||||||||||||| |||||||||| Sbjct: 1447876 ggcagcggcgtcggcaatgcgttt 1447899
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gccacggccgcgtgggcggc 182 |||||||||||||||||||| Sbjct: 59692 gccacggccgcgtgggcggc 59673
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 gctgctcgccgcggcggccggcgc 139 |||||||||| ||||||||||||| Sbjct: 213586 gctgctcgccccggcggccggcgc 213609
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ctgctcgccgcggcggccgg 136 |||||||||||||||||||| Sbjct: 139729 ctgctcgccgcggcggccgg 139748
>gb|AE012451.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 359 of 460 of the complete genome Length = 10291 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 gctgcagtggctgcgctcgaacgg 385 |||||||||||||||| ||||||| Sbjct: 5488 gctgcagtggctgcgcccgaacgg 5511
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ggcgcgctgcagtggctgcg 376 |||||||||||||||||||| Sbjct: 1545010 ggcgcgctgcagtggctgcg 1545029
>gb|DQ360292.1| Mus musculus strain CAST/Ei C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 200011 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tcctcctggcctcgctgctc 122 |||||||||||||||||||| Sbjct: 176191 tcctcctggcctcgctgctc 176210
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cctgaggcggccgcggcgctgctg 218 |||| ||||||||||||||||||| Sbjct: 126223 cctgcggcggccgcggcgctgctg 126246
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 487 tgcggaacctgcacgccgcgctggcgtc 514 |||| ||||||| ||||||||||||||| Sbjct: 2360322 tgcgcaacctgcgcgccgcgctggcgtc 2360295
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 gctgcagtggctgcgctcgaacgg 385 |||||||||||||||| ||||||| Sbjct: 996598 gctgcagtggctgcgcccgaacgg 996575
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tgctcgccgcggcggccggc 137 |||||||||||||||||||| Sbjct: 1564351 tgctcgccgcggcggccggc 1564370
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cgtcggcaacgaggtgctct 447 |||||||||||||||||||| Sbjct: 21557005 cgtcggcaacgaggtgctct 21556986
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 tacctcgtcgtcggcaacgaggtgctct 447 |||||| |||||||||||||||| |||| Sbjct: 35347026 tacctcttcgtcggcaacgaggtcctct 35346999 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgccgcggcggccggcgccg 141 |||||||||||||||||||| Sbjct: 22547582 cgccgcggcggccggcgccg 22547563 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cctgaggcggccgcggcgctgctg 218 |||| ||||||||||||||||||| Sbjct: 14371969 cctgcggcggccgcggcgctgctg 14371992
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 tacctcgtcgtcggcaacgaggtgctct 447 |||||| |||||||||||||||| |||| Sbjct: 111500 tacctcttcgtcggcaacgaggtcctct 111527
>gb|AE004684.1| Pseudomonas aeruginosa PAO1, section 245 of 529 of the complete genome Length = 9788 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 acctgcacgccgcgctggcg 512 |||||||||||||||||||| Sbjct: 6870 acctgcacgccgcgctggcg 6851
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ccttcgccgcggccggcatc 296 |||||||||||||||||||| Sbjct: 2928836 ccttcgccgcggccggcatc 2928817
>gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the complete genome Length = 11487 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cggcatcgacctcaccgtcg 309 |||||||||||||||||||| Sbjct: 5581 cggcatcgacctcaccgtcg 5562
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 101 cgtcctcctggcctcgctgctcgccgcg 128 ||||||||||||| |||||||| ||||| Sbjct: 21173 cgtcctcctggccgcgctgctctccgcg 21146
>dbj|AK109814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H05, full insert sequence Length = 1631 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 tacctcgtcgtcggcaacgaggtgctct 447 |||||| |||||||||||||||| |||| Sbjct: 340 tacctcttcgtcggcaacgaggtcctct 367
>dbj|AK072943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148N05, full insert sequence Length = 2634 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgtcggcaacgaggtgctct 447 |||||||||||||||||||| Sbjct: 479 cgtcggcaacgaggtgctct 498
>dbj|AK067284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100P21, full insert sequence Length = 2768 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgtcggcaacgaggtgctct 447 |||||||||||||||||||| Sbjct: 423 cgtcggcaacgaggtgctct 442
>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence Length = 222792 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tcctcctggcctcgctgctc 122 |||||||||||||||||||| Sbjct: 131692 tcctcctggcctcgctgctc 131711
>gb|AY106757.1| Zea mays PCO140977 mRNA sequence Length = 450 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgtcctcctggcctcgctgc 120 |||||||||||||||||||| Sbjct: 220 cgtcctcctggcctcgctgc 239
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 cgacccggccgtgctcccggcctt 280 ||||||||||||||||| |||||| Sbjct: 1608682 cgacccggccgtgctccaggcctt 1608659
>dbj|AB089611.1| Serratia marcescens comF, bioH, ORFX, ORF1, ORF2, feoB genes, partial and complete cds Length = 2837 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cagcggcagcggcgtcgcca 86 |||||||||||||||||||| Sbjct: 1909 cagcggcagcggcgtcgcca 1928
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcgccgcggcggccggcgcc 140 |||||||||||||||||||| Sbjct: 2347352 tcgccgcggcggccggcgcc 2347333
>emb|AJ628421.2| Micromonospora olivasterospora fortimicin biosynthesis gene cluster, strain DSM 43868 Length = 47238 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cttcgccgcggccggcatcg 297 |||||||||||||||||||| Sbjct: 8053 cttcgccgcggccggcatcg 8072
>emb|AJ271430.1|SSP271430 Shanorella spirotricha 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain CBS 305.56 Length = 617 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 gcggcgtcgccaatgcgtttcggc 98 |||||||||||| ||||||||||| Sbjct: 474 gcggcgtcgccactgcgtttcggc 451
>gb|M96938.1|BLYGLCNHI Hordeum vulgare glucan endo-1,3-beta-glucosidase (isoenzyme I) mRNA, 3' end Length = 1025 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gtgccggccatgcggaacct 496 |||||||||||||||||||| Sbjct: 304 gtgccggccatgcggaacct 323
>gb|M68877.1|SMASMFEFG Serratia marcescens adhesin (smfE, smfF, and smfG) genes, complete cds Length = 2251 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ctggcctcgctgctcgccgc 127 |||||||||||||||||||| Sbjct: 1096 ctggcctcgctgctcgccgc 1077
>dbj|AB070946.1| Streptomyces avermitilis polyketide-8 biosynthetic gene cluster Length = 24790 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ctcccggccttcgccgcggc 289 |||||||||||||||||||| Sbjct: 17368 ctcccggccttcgccgcggc 17387 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,390,156 Number of Sequences: 3902068 Number of extensions: 3390156 Number of successful extensions: 88261 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79382 Number of HSP's gapped (non-prelim): 8876 length of query: 531 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 508 effective length of database: 17,143,297,704 effective search space: 8708795233632 effective search space used: 8708795233632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
