>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)|
           (SE)
          Length = 497

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 161 EEEEQRHGCPGHPHGRFLDSCGALC 87
           EE+E+ HG  G  HGRFL +  A+C
Sbjct: 139 EEDEREHGV-GFVHGRFLQNLRAIC 162

>RPC1_TRYBB (P08968) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)|
          Length = 1530

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 22/82 (26%), Positives = 31/82 (37%)
 Frame = -1

Query: 466  NG*ISNRRDGKEAPSAARSLPSPGAAARKWKKSDSGQEACLSSE*XAAMEPRR*CASRVM 287
            +G I+N+R  K APS        G    + +  +  Q   L             CAS+ +
Sbjct: 1076 SGPIANKRTKKRAPSLKVKDSKEGGRVSELRDLEMLQTELLPLTRGMVTRFIAQCASKYL 1135

Query: 286  AMCTSPGSHTPAAAADGAGHPS 221
                 PG+   A AA   G PS
Sbjct: 1136 RKACEPGTPCGAIAAQSVGEPS 1157

>DBP7_KLULA (Q6CK32) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)|
          Length = 740

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 303 HYLRGSMAAIYSLLRHASCPESLFFHFLAAAPGDGKLRAALG 428
           HY  GS + +   +   SC +S+ FH+   +  DG  R  +G
Sbjct: 419 HYKEGSKSDVTRTIVFLSCSDSVDFHYEVFSSHDGNHRGLVG 460

>MMP24_HUMAN (Q9Y5R2) Matrix metalloproteinase-24 precursor (EC 3.4.24.-)|
           (MMP-24) (Membrane-type matrix metalloproteinase 5)
           (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase)
           (MT5-MMP)
          Length = 645

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
 Frame = -1

Query: 445 RDGKEAPSAARSLPSPGAAAR--KWKKSDSGQEACLSSE*XAAMEPRR*CASRVMAMCTS 272
           R G+ AP      P PG A R  +W+                   P R     + A+C  
Sbjct: 5   RGGRAAPGPPPPPPPPGQAPRWSRWRV------------------PGRLLLLLLPALCCL 46

Query: 271 PGSHTPAAAADGAGH 227
           PG+   AAAA GAG+
Sbjct: 47  PGAARAAAAAAGAGN 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,420,935
Number of Sequences: 219361
Number of extensions: 522521
Number of successful extensions: 1883
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)