>EF1D1_ORYSA (Q40680) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation|
           factor 1B-beta 1) (eEF-1B beta 1)
          Length = 228

 Score =  104 bits (260), Expect = 8e-23
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           NV++EAGLKKLD YLL+RSYISGYQAS DDLAVYS FS AP S+ TNVARW+ HIDALL+
Sbjct: 6   NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLR 65

Query: 433 LSGV 444
           LSGV
Sbjct: 66  LSGV 69

>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation|
           factor 1B-beta 1) (eEF-1B beta 1)
          Length = 231

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +1

Query: 238 MAATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           MAA  N+N++AGLKKLD +LL+RSYI+GYQASKDD+ V++  +  P S   N +RWYNHI
Sbjct: 1   MAAFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHI 60

Query: 418 DALLKLSGV 444
           DALL++SGV
Sbjct: 61  DALLRISGV 69

>EF1D_PIMBR (P93447) Elongation factor 1-delta (EF-1-delta) (Elongation factor|
           1B-beta) (eEF-1B beta)
          Length = 225

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 42/65 (64%), Positives = 56/65 (86%)
 Frame = +1

Query: 250 FNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALL 429
           +++++EAGL+KLD YLLSRSYISGYQASKDDLAV++  +  P S   NV+RWYNH++ALL
Sbjct: 5   YDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALL 64

Query: 430 KLSGV 444
           ++SGV
Sbjct: 65  RISGV 69

>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation|
           factor 1B-beta 2) (eEF-1B beta 2)
          Length = 231

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +1

Query: 238 MAATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           MAA  N+N+ +GLKKLD +LL+RSYI+GYQASKDD+ V++  S  P S   NV+RW+NHI
Sbjct: 1   MAAFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHI 60

Query: 418 DALLKLSGV 444
           DALL++SGV
Sbjct: 61  DALLRISGV 69

>EF1D2_ORYSA (Q40682) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation|
           factor 1B-beta 2) (eEF-1B beta 2)
          Length = 225

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           NVN+EAGL+KLD YLL+RSYISGYQASKDD+ V++    AP ++  NV RWY+HI ALL+
Sbjct: 6   NVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLR 65

Query: 433 LSGV 444
            SGV
Sbjct: 66  SSGV 69

>EF1D_BETVU (O81918) Elongation factor 1-delta (EF-1-delta) (Elongation factor|
           1B-beta) (eEF-1B beta)
          Length = 230

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = +1

Query: 241 AATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           A TF+ +++ AGL  LD YLLSRSYI+GYQASKDDL V+S    A  ++  NV+RWY HI
Sbjct: 1   AVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHI 60

Query: 418 DALLKLSGV 444
           DALL++SGV
Sbjct: 61  DALLRISGV 69

>EF1B_DROME (O96827) Probable elongation factor 1-beta (EF-1-beta)|
          Length = 221

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           +V    GLK+L+ +L   SYISGY  SK DL+V+     AP +   NVARWY HI
Sbjct: 4   DVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHI 58

>EF1B_XENLA (P30151) Elongation factor 1-beta (EF-1-beta) (p30)|
          Length = 226

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           ++ + AGLK L  +L  +SYI GY  S+ D+AV+   S APP+   +  RWYNHI +  K
Sbjct: 4   DLKSPAGLKVLKEFLADKSYIEGYVPSQADVAVFDALSAAPPADLFHALRWYNHIKSYEK 63

>EF1B_XENTR (Q6DET9) Elongation factor 1-beta (EF-1-beta)|
          Length = 227

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           ++ + AGLK L+ +L  +SYI GY  S+ D+AV+   S APP+   +  RWYNHI +  K
Sbjct: 4   DLKSPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPADLFHALRWYNHIKSYEK 63

>EF1B_HUMAN (P24534) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           ++ + AGL+ L+ YL  +SYI GY  S+ D+AV+   S  PP+   +  RWYNHI +  K
Sbjct: 4   DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSYEK 63

>EF1B_RABIT (P34826) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           ++ + AGL+ L+ YL  +SYI GY  S+ D+AV+   S  PP+   +  RWYNHI +  K
Sbjct: 4   DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63

>EF1B_BOVIN (Q5E983) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           ++ + AGL+ L+ YL  +SYI GY  S+ D+AV+   S  PP+   +  RWYNHI +  K
Sbjct: 4   DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63

>EF1B_MOUSE (O70251) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 25/60 (41%), Positives = 36/60 (60%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           ++   AGL+ L+ YL  +SYI GY  S+ D+AV+   S  PP+   +  RWYNHI +  K
Sbjct: 4   DLKTPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63

>EF1B_CHICK (Q9YGQ1) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 23/60 (38%), Positives = 36/60 (60%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 432
           ++ + AGL+ L+ +L  +SYI GY  S+ D+AV+      PP+   +  RWYNHI +  K
Sbjct: 4   DLKSAAGLRVLNDFLADKSYIEGYVPSQADIAVFEAVGAPPPADLFHALRWYNHIKSYEK 63

>EF1B_PIG (P29412) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 23/55 (41%), Positives = 33/55 (60%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           ++ + AGL+ L+ YL  +SYI GY  S+ D+AV+   S  PP+       WYNHI
Sbjct: 4   DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSXPPPAXLXXXXXWYNHI 58

>EF1B2_BOMMO (P29522) Elongation factor 1-beta'|
          Length = 221

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/58 (39%), Positives = 33/58 (56%)
 Frame = +1

Query: 244 ATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           A  +V    GL  L+ YL  +SY+SGY  S+ D+ V+ +   AP +   +V RWYN I
Sbjct: 1   AVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQI 58

>EF1B2_ARATH (Q9SCX3) Elongation factor 1-beta 2 (EF-1-beta 2) (Elongation|
           factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor
           1-beta' 2) (EF-1-beta' 2)
          Length = 224

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = +1

Query: 238 MAATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNH 414
           MA TF+ ++ E G+K ++ +L  ++YISG Q S DD+ VY+   V P     N ++WY  
Sbjct: 1   MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60

Query: 415 IDALLKLS 438
           + + L  S
Sbjct: 61  VASQLAKS 68

>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)|
          Length = 206

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 20/60 (33%), Positives = 38/60 (63%)
 Frame = +1

Query: 244 ATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDA 423
           A  ++ AE G ++L+  L ++SY+ GY+ S++D+A +++ + AP      + RWY HI +
Sbjct: 1   ANIDLKAEKGQEQLNELLANKSYLQGYEPSQEDVAAFNQLNKAPSDKFPYLLRWYKHISS 60

>SYC_MOUSE (Q9ER72) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 831

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +1

Query: 268 AGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAP-PSTCTNVARWYNHIDALL 429
           A ++ LD +L +RSYI GY  S+ D+ V+ + S  P  S   +VARW+ HI+ALL
Sbjct: 23  ARVQALDQHLSTRSYIQGYSLSQADVDVFRQLSAPPADSRLFHVARWFRHIEALL 77

>EF1B_SCHPO (O74173) Elongation factor 1-beta (EF-1-beta)|
          Length = 214

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPST-CTNVARWYNHI 417
           ++ ++AGLK+L+ +LL +S+I GY+ S+ D  V+    VAP +    N ARWY  I
Sbjct: 5   DLTSDAGLKQLNDFLLDKSFIEGYEPSQADAVVFKAVGVAPDTAKYPNGARWYKQI 60

>EF1B1_ARATH (Q84WM9) Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation|
           factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor
           1-beta' 1) (EF-1-beta' 1)
          Length = 228

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = +1

Query: 238 MAATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNH 414
           MA TF+ ++ E GLK L+ +L  ++YISG Q S DD+ VY+     P     N ++WY+ 
Sbjct: 1   MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60

Query: 415 IDALLKLS 438
           + + L  S
Sbjct: 61  VASHLAKS 68

>EF1B_ORYSA (P29545) Elongation factor 1-beta (EF-1-beta) (Elongation factor|
           1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta')
           (EF-1-beta')
          Length = 223

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +1

Query: 241 AATF-NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           A TF +++   GLK L+ +L  ++Y+SG   SKDD+ V++     P +   N ARWY+ +
Sbjct: 1   AVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTV 60

Query: 418 DALL 429
            A L
Sbjct: 61  AAAL 64

>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor|
           1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta')
           (EF-1-beta')
          Length = 215

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = +1

Query: 241 AATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 417
           A TF+ ++   GLK L+ +L  ++YISG   +KDD+ V++   + P +   N ARWY+ +
Sbjct: 1   AVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTV 60

Query: 418 DA 423
            A
Sbjct: 61  AA 62

>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1|
           (EF-1-beta/delta 1)
          Length = 213

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +1

Query: 253 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAP-PSTCTNVARWYNHI 417
           +V + AGL   +  L  +++ +G+  S +D  +++    AP  ST  NVARWY ++
Sbjct: 4   DVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANV 59

>Y183_TREPA (O83213) Hypothetical protein TP0183 precursor|
          Length = 281

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 136 RGVRSDALCVLFVKFGHASHASVKISCF 219
           +GVRS  L +LFV F HA HA+ ++  +
Sbjct: 3   KGVRSSRLLILFVLFAHAVHAAPRVGVY 30

>GSTT3_DROME (Q9VG97) Glutathione S-transferase D3 (EC 2.5.1.18) (DmGST22)|
          Length = 199

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
 Frame = +1

Query: 283 LDGYLLSRSYISGYQASKDDLAVY---SEFSVA--PPSTCTNVARWYNHI 417
           L+ +L  + Y++G Q +  D+A+    S F V     S   NVARWY+H+
Sbjct: 121 LNTFLEGQDYVAGDQYTVADIAILANVSNFDVVGFDISKYPNVARWYDHV 170

>YHJ1_YEAST (P38766) Hypothetical ATP-dependent helicase YHR031C (EC 3.6.1.-)|
          Length = 723

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 105 RPITEICSNTRQLTTYKRLQIEDQSSRRTTAQER 4
           R +T + SN+RQL+    + IED S + +T  ER
Sbjct: 152 REVTSVKSNSRQLSFTSTINIEDSSMKLSTDSER 185

>THM2_THADA (P02884) Thaumatin-2 precursor (Thaumatin II)|
          Length = 235

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 174 QIWSRVACFSEDQLFSILLRQD-GGYLQC*R*GRP 275
           +IW+R  C+ +D    I    D GG LQC R GRP
Sbjct: 71  KIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRP 105

>MYPC3_CHICK (Q90688) Myosin-binding protein C, cardiac-type (Cardiac MyBP-C)|
           (C-protein, cardiac muscle isoform)
          Length = 1271

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 256 VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHID 420
           +N  A LKK D +L + +   G   S+ D+ V+     APPS    +A  Y   D
Sbjct: 288 LNFSALLKKRDSFLRTANRGDGKSDSQPDVDVWEILRKAPPSEYEKIAFQYGITD 342

>HLYA_PROMI (P16466) Hemolysin precursor|
          Length = 1577

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 232 GKMAATFNVNAEAGLKKLDGYLLSRSYISGYQAS 333
           GK  A FN   EAG  +L G+L + S ++G  AS
Sbjct: 74  GKPGAVFNNALEAGQSQLAGHLNANSNLNGQAAS 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,614,532
Number of Sequences: 219361
Number of extensions: 1273892
Number of successful extensions: 3279
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3278
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)