ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_520144.1| PREDICTED: Pan troglodytes similar to coronin, ... 48 0.023
2ref|NM_052820.2| Homo sapiens coronin, actin binding protein, 2A... 48 0.023
3emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on ch... 48 0.023
4gb|BC011690.2| Homo sapiens coronin, actin binding protein, 2A, ... 48 0.023
5dbj|AB209809.1| Homo sapiens mRNA for coronin, actin binding pro... 48 0.023
6ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predic... 44 0.36
7ref|NM_001038220.1| Bos taurus coronin, actin binding protein, 2... 44 0.36
8gb|BC109477.1| Bos taurus cDNA clone MGC:128280 IMAGE:7929071, c... 44 0.36
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
10dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
11gb|AY106084.1| Zea mays PCO072275 mRNA sequence 44 0.36
12ref|XM_473683.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
13gb|AE009375.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.4
14gb|AE008239.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.4
15gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome... 42 1.4
16gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosom... 42 1.4
17emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
18emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306... 42 1.4
22gb|AF049880.1|AF049880 Mus musculus TGFb inducible early protein... 42 1.4
23gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
24emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.4
25gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 1.4
26ref|XM_550500.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
27ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
28gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genom... 40 5.6
29gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.6
30gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.6
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.6
32ref|XM_810226.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.6
33gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.6
34emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.6
35emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.6
36dbj|AK152490.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.6
37dbj|AK154247.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.6
38dbj|AK153134.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.6
39dbj|AK170184.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.6
40dbj|AK045728.1| Mus musculus adult male corpora quadrigemina cDN... 40 5.6
41dbj|AK030971.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 5.6
42dbj|AK044060.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 5.6
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
44dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
45gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.6
46ref|XM_575819.1| PREDICTED: Rattus norvegicus coronin, actin bin... 40 5.6
47dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
48dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
49ref|XM_317614.2| Anopheles gambiae str. PEST ENSANGP00000010000 ... 40 5.6
50dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
51ref|XM_308333.2| Anopheles gambiae str. PEST ENSANGP00000009390 ... 40 5.6
52emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on ch... 40 5.6
53gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 5.6
54gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.6

>ref|XM_520144.1| PREDICTED: Pan troglodytes similar to coronin, actin binding
           protein, 2A; coronin, actin-binding protein, 2A; coronin
           2A; coronin-like protein B; WD protein IR10; WD-repeat
           protein 2 (LOC464607), mRNA
          Length = 1501

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||||||||||||||||||||
Sbjct: 25  cgccgccaccgccacctgcgcggc 48



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>ref|NM_052820.2| Homo sapiens coronin, actin binding protein, 2A (CORO2A),
           transcript variant 2, mRNA
          Length = 2265

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||||||||||||||||||||
Sbjct: 49  cgccgccaccgccacctgcgcggc 72



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>emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on chromosome 9p23-24.1
              Contains a novel gene encoding a protein similar to
              bacterial N-acetylneuraminic acid condensing enzyme (NEUB)
              and 3' end of the TBCID2 gene, a TRIM14 gene encoding
              tripartite motif-containing 14 (KIAA0129), the CORO2A gene
              encoding Coronin 2A (actin-binding protein), TBC1D2 gene
              encoding TBC1 domain family, member 2 (PARIS1,
              PARIS-1,DKFZP761D1823, DKFZp761D1823), and 4 CpG islands,
              complete sequence
          Length = 201300

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 327    cgccgccaccgccacctgcgcggc 350
              ||||||||||||||||||||||||
Sbjct: 171764 cgccgccaccgccacctgcgcggc 171741



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>gb|BC011690.2| Homo sapiens coronin, actin binding protein, 2A, transcript variant
           2, mRNA (cDNA clone MGC:19551 IMAGE:3350035), complete
           cds
          Length = 2265

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||||||||||||||||||||
Sbjct: 49  cgccgccaccgccacctgcgcggc 72



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>dbj|AB209809.1| Homo sapiens mRNA for coronin, actin binding protein, 2A variant
           protein
          Length = 1679

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||||||||||||||||||||
Sbjct: 54  cgccgccaccgccacctgcgcggc 77



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>ref|NM_190071.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1275

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 280 tcggccaactccaccgacggcagcaacccgctgtccccggtctcattcgccgcc 333
           ||||| ||| ||||||||||||  |||||||| | |||||| || |||||||||
Sbjct: 409 tcggcgaacgccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 462



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>ref|NM_001038220.1| Bos taurus coronin, actin binding protein, 2A (CORO2A), mRNA
          Length = 4559

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 329 ccgccaccgccacctgcgcggc 350
           ||||||||||||||||||||||
Sbjct: 57  ccgccaccgccacctgcgcggc 78



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>gb|BC109477.1| Bos taurus cDNA clone MGC:128280 IMAGE:7929071, complete cds
          Length = 4559

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 329 ccgccaccgccacctgcgcggc 350
           ||||||||||||||||||||||
Sbjct: 57  ccgccaccgccacctgcgcggc 78



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                      
Query: 280      tcggccaactccaccgacggcagcaacccgctgtccccggtctcattcgccgcc 333
                ||||| ||| ||||||||||||  |||||||| | |||||| || |||||||||
Sbjct: 41132580 tcggcgaacgccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 41132527



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 290      ccaccgacggcagcaacccgctgtccccggtc 321
                ||||| |||||||||||||||| | |||||||
Sbjct: 41126918 ccaccaacggcagcaacccgctctacccggtc 41126887



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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 280   tcggccaactccaccgacggcagcaacccgctgtccccggtctcattcgccgcc 333
             ||||| ||| ||||||||||||  |||||||| | |||||| || |||||||||
Sbjct: 29635 tcggcgaacgccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 29582



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 290   ccaccgacggcagcaacccgctgtccccggtc 321
             ||||| |||||||||||||||| | |||||||
Sbjct: 23973 ccaccaacggcagcaacccgctctacccggtc 23942



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>gb|AY106084.1| Zea mays PCO072275 mRNA sequence
          Length = 1307

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 274 acgctctcggccaactccaccgacggcagcaacccgctgtccccggtctc 323
           ||||| || |||||| |||||||||||   |||||||||| |||||||||
Sbjct: 305 acgctatccgccaacgccaccgacggccagaacccgctgttcccggtctc 354



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>ref|XM_473683.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 567

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 92  tgctcctcctgctcgccgcctccac 116
           |||||||||| ||||||||||||||
Sbjct: 41  tgctcctcctactcgccgcctccac 65



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>gb|AE009375.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 145 of
            187 of the complete sequence
          Length = 10493

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   cctgctcgccgcctccacggt 119
            |||||||||||||||||||||
Sbjct: 3382 cctgctcgccgcctccacggt 3362



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>gb|AE008239.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 43 of
            187 of the complete sequence
          Length = 11603

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 99   cctgctcgccgcctccacggt 119
            |||||||||||||||||||||
Sbjct: 9110 cctgctcgccgcctccacggt 9130



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>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence
          Length = 181742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    ctcctcctgctcgccgcctcc 114
             |||||||||||||||||||||
Sbjct: 19571 ctcctcctgctcgccgcctcc 19591



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>gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosome 15, complete sequence
          Length = 156807

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 94     ctcctcctgctcgccgcctcc 114
              |||||||||||||||||||||
Sbjct: 151703 ctcctcctgctcgccgcctcc 151723



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>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16,
             complete sequence
          Length = 133113

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 92    tgctcctcctgctcgccgcctccac 116
             |||||||||| ||||||||||||||
Sbjct: 14546 tgctcctcctactcgccgcctccac 14570



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>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
              complete sequence
          Length = 145739

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 92     tgctcctcctgctcgccgcctccac 116
              |||||||||| ||||||||||||||
Sbjct: 130015 tgctcctcctactcgccgcctccac 130039



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 92       tgctcctcctgctcgccgcctccac 116
                |||||||||| ||||||||||||||
Sbjct: 29627326 tgctcctcctactcgccgcctccac 29627350



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      cattcgccgccaccgccacct 343
                |||||||||||||||||||||
Sbjct: 25042150 cattcgccgccaccgccacct 25042170



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>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121563

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   cattcgccgccaccgccacct 343
             |||||||||||||||||||||
Sbjct: 89329 cattcgccgccaccgccacct 89309



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>gb|AF049880.1|AF049880 Mus musculus TGFb inducible early protein and hypothetical TGFb
            inducible early protein splice variant genes, complete
            cds
          Length = 7228

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 94   ctcctcctgctcgccgcctcc 114
            |||||||||||||||||||||
Sbjct: 1882 ctcctcctgctcgccgcctcc 1862



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 323      cattcgccgccaccgccacct 343
                |||||||||||||||||||||
Sbjct: 24970355 cattcgccgccaccgccacct 24970375



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>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146686

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   cattcgccgccaccgccacct 343
             |||||||||||||||||||||
Sbjct: 65018 cattcgccgccaccgccacct 64998



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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 327     cgccgccaccgccacctgcgc 347
               |||||||||||||||||||||
Sbjct: 2975367 cgccgccaccgccacctgcgc 2975347



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>ref|XM_550500.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1164

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  tgctcctcctgctcgccgcctcca 115
           ||||| ||||||||||||||||||
Sbjct: 773 tgctcatcctgctcgccgcctcca 796



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>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 290 ccaccgacggcagcaacccgctgtccccggtc 321
           ||||| |||||||||||||||| | |||||||
Sbjct: 425 ccaccaacggcagcaacccgctctacccggtc 456



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>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete
              sequence
          Length = 145714

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 327    cgccgccaccgccacctgc-gcggcggc 353
              ||||||||||||||||||| ||||||||
Sbjct: 108108 cgccgccaccgccacctgctgcggcggc 108135



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 230     cgccgtccatcacgacgccgtgca 253
               ||||| ||||||||||||||||||
Sbjct: 1298997 cgccgcccatcacgacgccgtgca 1299020



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    ccgcgccgtccatcacgacg 246
              ||||||||||||||||||||
Sbjct: 912195 ccgcgccgtccatcacgacg 912176



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 230     cgccgtccatcacgacgccgtgca 253
               ||||| ||||||||||||||||||
Sbjct: 2159893 cgccgcccatcacgacgccgtgca 2159870



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 227     ccgcgccgtccatcacgacg 246
               ||||||||||||||||||||
Sbjct: 1954794 ccgcgccgtccatcacgacg 1954775



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                            
Query: 327      cgccgccaccgccacctgc-gcggcggc 353
                ||||||||||||||||||| ||||||||
Sbjct: 16476225 cgccgccaccgccacctgctgcggcggc 16476198



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>ref|XM_810226.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509153.10) partial mRNA
          Length = 4236

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 gcgctctacacggcgcccct 194
           ||||||||||||||||||||
Sbjct: 324 gcgctctacacggcgcccct 343



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     ccaccgccacctgcgcggcg 351
               ||||||||||||||||||||
Sbjct: 4387612 ccaccgccacctgcgcggcg 4387593



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>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 325   ttcgccgccaccgccacctgcgcg 348
             ||||||||||||||||||| ||||
Sbjct: 52208 ttcgccgccaccgccaccttcgcg 52231



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     ccgcgccgtccatcacgacg 246
               ||||||||||||||||||||
Sbjct: 2422042 ccgcgccgtccatcacgacg 2422061



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 230     cgccgtccatcacgacgccgtgca 253
               ||||| ||||||||||||||||||
Sbjct: 2214798 cgccgcccatcacgacgccgtgca 2214821



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>dbj|AK152490.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830076E18 product:coronin,
           actin binding protein 2A, full insert sequence
          Length = 3695

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 69  cgccgccgccgccacctgcgcggc 92



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>dbj|AK154247.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630011O17
           product:coronin, actin binding protein 2A, full insert
           sequence
          Length = 1832

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 37  cgccgccgccgccacctgcgcggc 60



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>dbj|AK153134.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830124C10 product:coronin,
           actin binding protein 2A, full insert sequence
          Length = 3695

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 69  cgccgccgccgccacctgcgcggc 92



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>dbj|AK170184.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630025I05
           product:coronin, actin binding protein 2A, full insert
           sequence
          Length = 3635

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 38  cgccgccgccgccacctgcgcggc 61



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>dbj|AK045728.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230308E04
           product:Mus musculus endogenous mouse mammary tumor
           virus like fragment, full insert sequence
          Length = 4631

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 21  cgccgccgccgccacctgcgcggc 44



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>dbj|AK030971.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830472M12 product:CORONIN, ACTIN-BINDING
           PROTEIN, 2A (UNKNOWN) (PROTEIN FOR MGC:19551) homolog
           [Homo sapiens], full insert sequence
          Length = 3640

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 36  cgccgccgccgccacctgcgcggc 59



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>dbj|AK044060.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830085G19 product:CORONIN,
           ACTIN-BINDING PROTEIN, 2A (UNKNOWN) (PROTEIN FOR
           MGC:19551) [Homo sapiens], full insert sequence
          Length = 1389

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 42  cgccgccgccgccacctgcgcggc 65



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     tgctcctcctgctcgccgcctcca 115
              ||||| ||||||||||||||||||
Sbjct: 825329 tgctcatcctgctcgccgcctcca 825352



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                            
Query: 327      cgccgccaccgccacctgc-gcggcggc 353
                ||||||||||||||||||| ||||||||
Sbjct: 16469858 cgccgccaccgccacctgctgcggcggc 16469831



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 184     acggcgcccctcagcgccgg 203
               ||||||||||||||||||||
Sbjct: 1894874 acggcgcccctcagcgccgg 1894855



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>ref|XM_575819.1| PREDICTED: Rattus norvegicus coronin, actin binding protein 2A
           (predicted) (Coro2a_predicted), mRNA
          Length = 3576

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 cgccgccaccgccacctgcgcggc 350
           ||||||| ||||||||||||||||
Sbjct: 80  cgccgccgccgccacctgcgcggc 103



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>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0541H01
          Length = 157519

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     tgctcctcctgctcgccgcctcca 115
              ||||| ||||||||||||||||||
Sbjct: 108463 tgctcatcctgctcgccgcctcca 108486



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>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0019F11
          Length = 123673

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 92   tgctcctcctgctcgccgcctcca 115
            ||||| ||||||||||||||||||
Sbjct: 6224 tgctcatcctgctcgccgcctcca 6247



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>ref|XM_317614.2| Anopheles gambiae str. PEST ENSANGP00000010000
           (ENSANGG00000007511), partial mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  tgctcctcctgctcgccgcc 111
           ||||||||||||||||||||
Sbjct: 437 tgctcctcctgctcgccgcc 418



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>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
           insert sequence
          Length = 1405

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 290 ccaccgacggcagcaacccgctgtccccggtc 321
           ||||| |||||||||||||||| | |||||||
Sbjct: 346 ccaccaacggcagcaacccgctctacccggtc 377



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>ref|XM_308333.2| Anopheles gambiae str. PEST ENSANGP00000009390
           (ENSANGG00000007026), partial mRNA
          Length = 3987

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 caccaaggtaaccaagggcg 163
           ||||||||||||||||||||
Sbjct: 297 caccaaggtaaccaagggcg 316



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>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete
              sequence
          Length = 227816

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    cgccgccaccgccacctgcgcggc 350
              ||||||| ||||||||||||||||
Sbjct: 213044 cgccgccgccgccacctgcgcggc 213021



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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 286     aactccaccgacggcagcaa 305
               ||||||||||||||||||||
Sbjct: 1329087 aactccaccgacggcagcaa 1329068



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     ccgcgccgtccatcacgacg 246
               ||||||||||||||||||||
Sbjct: 3057858 ccgcgccgtccatcacgacg 3057877


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,395,611
Number of Sequences: 3902068
Number of extensions: 2395611
Number of successful extensions: 60435
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 59321
Number of HSP's gapped (non-prelim): 1117
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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