Clone Name | bart09c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YQJG_ECOLI (P42620) Hypothetical protein yqjG | 64 | 2e-10 | 2 | ECM4_YEAST (P36156) Extracellular matrix protein 4 | 51 | 2e-06 | 3 | YM85_YEAST (Q04806) Hypothetical 42.4 kDa protein in FAA4-HOR7 i... | 46 | 5e-05 | 4 | YK67_CAEEL (P34345) Hypothetical protein C29E4.7 in chromosome III | 33 | 0.53 | 5 | GSTO1_RAT (Q9Z339) Glutathione transferase omega-1 (EC 2.5.1.18)... | 31 | 2.0 | 6 | GSTO1_MOUSE (O09131) Glutathione transferase omega-1 (EC 2.5.1.1... | 30 | 2.7 | 7 | IN21_MAIZE (P49248) IN2-1 protein | 29 | 5.9 | 8 | GLRX2_SYNY3 (P73492) Probable glutaredoxin ssr2061 | 29 | 7.7 |
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>YQJG_ECOLI (P42620) Hypothetical protein yqjG| Length = 328 Score = 64.3 bits (155), Expect = 2e-10 Identities = 42/98 (42%), Positives = 52/98 (53%), Gaps = 7/98 (7%) Frame = +1 Query: 142 DEVTDTGAFDRTPSTFRSFVSSDGA------ARFPAVAGRYHLYVSYACPWASRCLAYLK 303 D + G F R+ S FR+++++DGA F A RYHLYVS ACPWA R L K Sbjct: 15 DTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRK 74 Query: 304 LKGLDHAISFSSGKP-VFERTRESDDHLGWVFPAAAGE 414 LKGL+ IS S P + E DD FP A G+ Sbjct: 75 LKGLEPFISVSVVNPLMLENGWTFDDS----FPGATGD 108
>ECM4_YEAST (P36156) Extracellular matrix protein 4| Length = 370 Score = 50.8 bits (120), Expect = 2e-06 Identities = 30/59 (50%), Positives = 32/59 (54%) Frame = +1 Query: 160 GAFDRTPSTFRSFVSSDGAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFS 336 GAF R S+FR +S PA GRY LYVS ACPWA R L LKGL I S Sbjct: 11 GAFKRQVSSFRETISKQHPIYKPA-KGRYWLYVSLACPWAHRTLITRALKGLTSVIGCS 68
>YM85_YEAST (Q04806) Hypothetical 42.4 kDa protein in FAA4-HOR7 intergenic| region Length = 366 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/57 (47%), Positives = 30/57 (52%) Frame = +1 Query: 166 FDRTPSTFRSFVSSDGAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFS 336 F R S FR +S+D PA GRY LYV+ CPWA R L LKGL I S Sbjct: 13 FKRQSSPFREIISADHPIYKPA-KGRYWLYVALPCPWAQRTLITRALKGLAPIIGCS 68
>YK67_CAEEL (P34345) Hypothetical protein C29E4.7 in chromosome III| Length = 250 Score = 32.7 bits (73), Expect = 0.53 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 211 GAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLD 318 G A P G + +Y CPWA R + Y+ KG++ Sbjct: 14 GDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIE 49
>GSTO1_RAT (Q9Z339) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (Glutathione-dependent dehydroascorbate reductase) Length = 241 Score = 30.8 bits (68), Expect = 2.0 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 226 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAI 327 P G+ +Y CP+A R L LK KG+ H I Sbjct: 18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI 51
>GSTO1_MOUSE (O09131) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (p28) Length = 240 Score = 30.4 bits (67), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 226 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAI 327 P G+ +Y CP+A R L LK KG+ H + Sbjct: 18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV 51
>IN21_MAIZE (P49248) IN2-1 protein| Length = 243 Score = 29.3 bits (64), Expect = 5.9 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +1 Query: 226 PAVAGRYHLYVSYACPWASRCLAYLKLKGL 315 P G LY+ Y CP+A R LKGL Sbjct: 27 PVFDGTTRLYICYFCPFAQRAWVTRNLKGL 56
>GLRX2_SYNY3 (P73492) Probable glutaredoxin ssr2061| Length = 88 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 229 AVAGRYHLYVSYACPWASRCLAYLKLKGLD 318 AV+ + +Y CP+ R LA LK KG++ Sbjct: 2 AVSAKIEIYTWSTCPFCMRALALLKRKGVE 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,304,558 Number of Sequences: 219361 Number of extensions: 522266 Number of successful extensions: 2274 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2272 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)