Clone Name | bart09c04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SRS1_ORYSA (P83649) Salt-stress root protein RS1 | 157 | 1e-38 | 2 | XGPT_NITWN (Q3SQJ9) Xanthine phosphoribosyltransferase (EC 2.4.2... | 30 | 2.8 | 3 | MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A | 29 | 8.1 | 4 | DNAK_MYCHJ (Q4AAR4) Chaperone protein dnaK (Heat shock protein 7... | 29 | 8.1 | 5 | DNAK_MYCH7 (Q4A8U5) Chaperone protein dnaK (Heat shock protein 7... | 29 | 8.1 |
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>SRS1_ORYSA (P83649) Salt-stress root protein RS1| Length = 204 Score = 157 bits (398), Expect = 1e-38 Identities = 85/130 (65%), Positives = 93/130 (71%), Gaps = 1/130 (0%) Frame = +2 Query: 107 MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 286 MTSVWKTKVL GL+ EFLKSFN TELEPKVVE +E+S Sbjct: 1 MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60 Query: 287 PPEIKGLIKDKKT-SQIKKNSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSPAIVF 463 PPEIK L+KDKKT S+IKKN AV KFL+E+AKI FPGAK VSDAV KSGTTPLSPAI F Sbjct: 61 PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF 120 Query: 464 ILDXVAPFVP 493 IL+ VAPFVP Sbjct: 121 ILEKVAPFVP 130
>XGPT_NITWN (Q3SQJ9) Xanthine phosphoribosyltransferase (EC 2.4.2.22)| (Xanthine-guanine phosphoribosyltransferase) (XGPRT) Length = 168 Score = 30.4 bits (67), Expect = 2.8 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = -3 Query: 444 RGVVPDLTTASLTSLAPGKPILAISSRNLMTAAEFFLIWDVFLSFIKPLISG 289 RG++PD A++ + GKP++ + + WD+ L+F PL G Sbjct: 115 RGMIPDAHFATVYAKPLGKPLVDTFITEVSQDTWIYFPWDLDLAFAPPLRDG 166
>MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A| Length = 329 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 94 EGEEYDERMEDQGSPRAQQVLRQGWQEGRRRR 189 EG E R G QQ+L+QGWQ+ +R R Sbjct: 198 EGGELFRRHHVSGEVIRQQLLQQGWQQQQRAR 229
>DNAK_MYCHJ (Q4AAR4) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 600 Score = 28.9 bits (63), Expect = 8.1 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +2 Query: 248 ELEPKVVETIEASPPEIKGLIKDKKTSQIK 337 +++PK E +E E+K L+K++KT ++K Sbjct: 528 KIDPKQKELLEKQIQELKDLLKEEKTDELK 557
>DNAK_MYCH7 (Q4A8U5) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 600 Score = 28.9 bits (63), Expect = 8.1 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +2 Query: 248 ELEPKVVETIEASPPEIKGLIKDKKTSQIK 337 +++PK E +E E+K L+K++KT ++K Sbjct: 528 KIDPKQKELLEKQIQELKDLLKEEKTDELK 557 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,969,456 Number of Sequences: 219361 Number of extensions: 870410 Number of successful extensions: 2900 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2849 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2899 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)