>UN93L_ARATH (Q94AA1) UNC93-like protein|
          Length = 464

 Score =  129 bits (324), Expect = 5e-30
 Identities = 63/119 (52%), Positives = 85/119 (71%)
 Frame = +1

Query: 181 RSHAGDVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXXXXX 360
           + +  DVH+LS +FL +F AY   QNL++T+N +  LG +S+GILY S            
Sbjct: 25  KCYTRDVHILSISFLLIFLAYGAAQNLETTVNKD--LGTISLGILYVSFMFCSMVASLVV 82

Query: 361 RRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSAAIS 537
           R +GS+ ALV+GT+GY LF+ ANL P+W+TMVPAS+YLGF +S++WVGQGTYLTS A S
Sbjct: 83  RLMGSKNALVLGTTGYWLFVAANLKPSWFTMVPASLYLGFAASIIWVGQGTYLTSIARS 141

>UN93A_MOUSE (Q710D3) UNC93 homolog A (UNC-93A protein)|
          Length = 458

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = +1

Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXX-XXXRRLG 372
           +V ++S  FL +F+AY   QNLQS+L +E  LG  ++  LYAS             ++ G
Sbjct: 7   NVLVVSCGFLLLFTAYGGLQNLQSSLYSEQGLGVATLSTLYASVLLSSMFLPPILIKKCG 66

Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTS 525
            +  +V     Y +F L N    WYT++P S+ LG  ++ +W  QGTYLT+
Sbjct: 67  CKWTIVGSMCCYVVFSLGNFHANWYTLIPTSILLGLGAAPLWSAQGTYLTT 117

>UN93A_HUMAN (Q86WB7) UNC93 homolog A (UNC-93A protein) (HmUNC-93A)|
          Length = 457

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = +1

Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXX-XXXRRLG 372
           +V ++S  FL +F+AY   Q+LQS+L +E  LG  ++  LY                RLG
Sbjct: 7   NVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPLLIERLG 66

Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522
            +G +++   GY  F + N   +WYT++P S+ LG  ++ +W  Q TYLT
Sbjct: 67  CKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLT 116

>UNC93_CAEEL (Q93380) Putative potassium channel regulatory protein unc-93|
           (Uncoordinated protein 93)
          Length = 705

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
 Frame = +1

Query: 175 LRRSHAGDVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXX-X 351
           ++R    ++ +LS AFLF+F+A+   QNLQ+++N  G+LG+ S+  LY S          
Sbjct: 242 IKRKIMSNLWILSVAFLFLFTAFNGLQNLQTSVN--GDLGSDSLVALYLSLAISSLFVPS 299

Query: 352 XXXRRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSAA 531
               RLG +   ++    Y L+I+ NL PT+ +M+PAS++ G  +S +W  +  Y+T   
Sbjct: 300 FMINRLGCKLTFLIAIFVYFLYIVINLRPTYSSMIPASIFCGIAASCIWGAKCAYITEMG 359

Query: 532 I 534
           I
Sbjct: 360 I 360

>UN93A_XENLA (Q6DDL7) UNC93 homolog A|
          Length = 460

 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 34/112 (30%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = +1

Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXX-XXXRRLG 372
           ++ ++S  FL +F+A+   Q+LQS+LN++  LG  S+ ++YA+             +++G
Sbjct: 6   NILIVSFGFLLLFTAFGGLQSLQSSLNSDEGLGVASLSVIYAALIVSSVFVPPIVIKKIG 65

Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSA 528
            +  +V     Y  + L N   +WYT++P S+ LGF  + +W  + TYLT +
Sbjct: 66  CKWTIVASMCCYITYSLGNFYASWYTLIPTSLILGFGGAPLWAAKCTYLTES 117

>UN93L_DROME (Q9Y115) UNC93-like protein|
          Length = 538

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +1

Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXX-XXXXRRLG 372
           ++ ++S AF+  F+A+  T NLQS++N +  LG VS+  +YA+             R+L 
Sbjct: 45  NISIISIAFMVQFTAFQGTANLQSSINAKDGLGTVSLSAIYAALVVSCIFLPTLIIRKLT 104

Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522
            +  LV     YA +I   L P +YT+VPA + +G  ++ MW  + TYLT
Sbjct: 105 VKWTLVCSMLCYAPYIAFQLFPRFYTLVPAGILVGMGAAPMWASKATYLT 154

>UN93A_BRARE (Q5SPF7) UNC93 homolog A|
          Length = 465

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +1

Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXX-XXXXRRLG 372
           +V ++S  FL +F+AY   Q+LQS+LN E  +G +S+ ++YA+             + LG
Sbjct: 7   NVLVVSFGFLLLFTAYGGLQSLQSSLNAEEGMGVISLSVIYAAIILSSMFLPPIMIKNLG 66

Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522
            +  +VV    Y  +   NL P W +++  S  LG   S +W  + TYLT
Sbjct: 67  CKWTIVVSMGCYVAYSFGNLAPGWASLMSTSAILGMGGSPLWSAKCTYLT 116

>UN93B_HUMAN (Q9H1C4) UNC93 homolog B1 (UNC-93B protein) (hUNC93B1)|
          Length = 597

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +1

Query: 361 RRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSAA 531
           R  G++  + +    YALF+  N    +YT+VP++V LG     +W   G Y+T  A
Sbjct: 131 RFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMA 187

>UN93B_MOUSE (Q8VCW4) UNC93 homolog B1 (UNC-93B protein)|
          Length = 598

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 361 RRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522
           R  G++  + +    YALF+  N    +YT+VP++V LG     +W   G Y+T
Sbjct: 131 RFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYIT 184

>SH2P1_XENLA (Q4QR29) SH2 domain-binding protein 1|
          Length = 1157

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -2

Query: 441  RWEEVGEDEERVAAGSDDERAPRPQPPHHGXXXRREDGEGGVQDPHGD 298
            R ++ GE EE V   SD+E APR +    G     E GEGG +   G+
Sbjct: 910  RSKKNGEFEEFVNDDSDEELAPRKKKRKKGGSSSGEQGEGGDEGEGGE 957

>T2EA_MOUSE (Q9D0D5) Transcription initiation factor IIE alpha subunit|
           (TFIIE-alpha) (General transcription factor IIE 56 kDa
           subunit)
          Length = 440

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = -2

Query: 495 HEGRSKTQVD*SRHHSVPRWEEVGEDEERVAAGSDDERAPRP---QPPHHGXXXRREDGE 325
           HE ++ +    S   + P     G D E   + SDD+  PRP    PPHH      ED E
Sbjct: 328 HEKKTSSVTAGSVGAAAPVTAANGSDSESETSESDDDSPPRPAAAAPPHHHRDEDEEDEE 387

>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 2 (SWI/SNF
           complex 170 kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/74 (27%), Positives = 29/74 (39%)
 Frame = -2

Query: 519 EIRALADPHEGRSKTQVD*SRHHSVPRWEEVGEDEERVAAGSDDERAPRPQPPHHGXXXR 340
           ++   ADP  G   + +  +      R EE G DE RV   + DE+    +P   G    
Sbjct: 724 KVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIE 783

Query: 339 REDGEGGVQDPHGD 298
            E  E   + P  D
Sbjct: 784 EEAKEKTSEAPKKD 797

>VNUC_EBOSB (Q9QP77) Nucleoprotein (Nucleocapsid protein)|
          Length = 738

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 393 DDERAPRPQPPHHGXXXRREDGEGGVQDPHGDGAQ 289
           DD+   RP PP  G    R     G+QDP  DGA+
Sbjct: 490 DDDDDSRPGPPDRGQNKERAARTYGLQDPTLDGAK 524

>HANG_DROME (Q9VXG1) Zinc finger protein hangover|
          Length = 1959

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -2

Query: 435  EEVGEDEERVAAGSDDERAPRPQPPHHGXXXRREDGEGGVQDPHGDGAQ 289
            EE  +D +  ++G DD+ +              EDGEG  +D  GDG +
Sbjct: 1641 EEDSDDLDEDSSGDDDDSSGTGDDDDDDDSDDDEDGEGEDEDEEGDGGE 1689

>GLYG4_SOYBN (P02858) Glycinin G4 precursor [Contains: Glycinin A5 subunit;|
           Glycinin A4 subunit; Glycinin B3 subunit]
          Length = 562

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 444 PRWEEVGEDEERVAAGSDDERAPR--PQPPHHGXXXRREDGEGGVQDP 307
           P+W+E  +++E      +DE+ P   P+ P HG   + ED +     P
Sbjct: 274 PKWQEQQDEDEDEDEDDEDEQIPSHPPRRPSHGKREQDEDEDEDEDKP 321

>WDR43_HUMAN (Q15061) WD-repeat protein 43|
          Length = 720

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -2

Query: 192 GVAPSQAARSXIGRR*EGHGSRLLLLVAAGAHCHPAAKLSLPC 64
           G AP +A     GR     G+R  +    G  C P A   +PC
Sbjct: 20  GAAPPRAGAPAHGRTRGCSGARAAMAAGGGGSCDPLAPAGVPC 62

>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -2

Query: 435 EEVGEDEERVAAGSDDERAPRPQPPHHGXXXRREDGEGGVQDPHGDG 295
           EE G+D +  + G DD      +PP  G      DGEG   D  GDG
Sbjct: 261 EEDGDDFDGASVGDDDVF----EPPEDGS-----DGEGSGSDDGGDG 298

>IP3KC_HUMAN (Q96DU7) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (InsP 3-kinase C)
           (IP3K-C)
          Length = 683

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 390 DERAPRPQPPHHGXXXRREDGEGGVQDPHGDGAQVALGVECAL 262
           D  A R QP   G   + +D +G    P  DG+Q A G +C L
Sbjct: 254 DTEAARKQPGTGGFQIQ-QDTDGSWTQPSTDGSQTAPGTDCLL 295


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,360,625
Number of Sequences: 219361
Number of extensions: 1001873
Number of successful extensions: 2969
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2953
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)