Clone Name | bart09c02 |
---|---|
Clone Library Name | barley_pub |
>UN93L_ARATH (Q94AA1) UNC93-like protein| Length = 464 Score = 129 bits (324), Expect = 5e-30 Identities = 63/119 (52%), Positives = 85/119 (71%) Frame = +1 Query: 181 RSHAGDVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXXXXX 360 + + DVH+LS +FL +F AY QNL++T+N + LG +S+GILY S Sbjct: 25 KCYTRDVHILSISFLLIFLAYGAAQNLETTVNKD--LGTISLGILYVSFMFCSMVASLVV 82 Query: 361 RRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSAAIS 537 R +GS+ ALV+GT+GY LF+ ANL P+W+TMVPAS+YLGF +S++WVGQGTYLTS A S Sbjct: 83 RLMGSKNALVLGTTGYWLFVAANLKPSWFTMVPASLYLGFAASIIWVGQGTYLTSIARS 141
>UN93A_MOUSE (Q710D3) UNC93 homolog A (UNC-93A protein)| Length = 458 Score = 75.9 bits (185), Expect = 7e-14 Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Frame = +1 Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXX-XXXRRLG 372 +V ++S FL +F+AY QNLQS+L +E LG ++ LYAS ++ G Sbjct: 7 NVLVVSCGFLLLFTAYGGLQNLQSSLYSEQGLGVATLSTLYASVLLSSMFLPPILIKKCG 66 Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTS 525 + +V Y +F L N WYT++P S+ LG ++ +W QGTYLT+ Sbjct: 67 CKWTIVGSMCCYVVFSLGNFHANWYTLIPTSILLGLGAAPLWSAQGTYLTT 117
>UN93A_HUMAN (Q86WB7) UNC93 homolog A (UNC-93A protein) (HmUNC-93A)| Length = 457 Score = 75.9 bits (185), Expect = 7e-14 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 1/110 (0%) Frame = +1 Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXX-XXXRRLG 372 +V ++S FL +F+AY Q+LQS+L +E LG ++ LY RLG Sbjct: 7 NVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPLLIERLG 66 Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522 +G +++ GY F + N +WYT++P S+ LG ++ +W Q TYLT Sbjct: 67 CKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLT 116
>UNC93_CAEEL (Q93380) Putative potassium channel regulatory protein unc-93| (Uncoordinated protein 93) Length = 705 Score = 73.9 bits (180), Expect = 3e-13 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Frame = +1 Query: 175 LRRSHAGDVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXX-X 351 ++R ++ +LS AFLF+F+A+ QNLQ+++N G+LG+ S+ LY S Sbjct: 242 IKRKIMSNLWILSVAFLFLFTAFNGLQNLQTSVN--GDLGSDSLVALYLSLAISSLFVPS 299 Query: 352 XXXRRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSAA 531 RLG + ++ Y L+I+ NL PT+ +M+PAS++ G +S +W + Y+T Sbjct: 300 FMINRLGCKLTFLIAIFVYFLYIVINLRPTYSSMIPASIFCGIAASCIWGAKCAYITEMG 359 Query: 532 I 534 I Sbjct: 360 I 360
>UN93A_XENLA (Q6DDL7) UNC93 homolog A| Length = 460 Score = 72.4 bits (176), Expect = 7e-13 Identities = 34/112 (30%), Positives = 63/112 (56%), Gaps = 1/112 (0%) Frame = +1 Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXXX-XXXRRLG 372 ++ ++S FL +F+A+ Q+LQS+LN++ LG S+ ++YA+ +++G Sbjct: 6 NILIVSFGFLLLFTAFGGLQSLQSSLNSDEGLGVASLSVIYAALIVSSVFVPPIVIKKIG 65 Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSA 528 + +V Y + L N +WYT++P S+ LGF + +W + TYLT + Sbjct: 66 CKWTIVASMCCYITYSLGNFYASWYTLIPTSLILGFGGAPLWAAKCTYLTES 117
>UN93L_DROME (Q9Y115) UNC93-like protein| Length = 538 Score = 72.0 bits (175), Expect = 1e-12 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 1/110 (0%) Frame = +1 Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXX-XXXXRRLG 372 ++ ++S AF+ F+A+ T NLQS++N + LG VS+ +YA+ R+L Sbjct: 45 NISIISIAFMVQFTAFQGTANLQSSINAKDGLGTVSLSAIYAALVVSCIFLPTLIIRKLT 104 Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522 + LV YA +I L P +YT+VPA + +G ++ MW + TYLT Sbjct: 105 VKWTLVCSMLCYAPYIAFQLFPRFYTLVPAGILVGMGAAPMWASKATYLT 154
>UN93A_BRARE (Q5SPF7) UNC93 homolog A| Length = 465 Score = 67.8 bits (164), Expect = 2e-11 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = +1 Query: 196 DVHLLSAAFLFVFSAYLPTQNLQSTLNTEGNLGAVSMGILYASXXXXXXXX-XXXXRRLG 372 +V ++S FL +F+AY Q+LQS+LN E +G +S+ ++YA+ + LG Sbjct: 7 NVLVVSFGFLLLFTAYGGLQSLQSSLNAEEGMGVISLSVIYAAIILSSMFLPPIMIKNLG 66 Query: 373 SRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522 + +VV Y + NL P W +++ S LG S +W + TYLT Sbjct: 67 CKWTIVVSMGCYVAYSFGNLAPGWASLMSTSAILGMGGSPLWSAKCTYLT 116
>UN93B_HUMAN (Q9H1C4) UNC93 homolog B1 (UNC-93B protein) (hUNC93B1)| Length = 597 Score = 42.4 bits (98), Expect = 8e-04 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +1 Query: 361 RRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLTSAA 531 R G++ + + YALF+ N +YT+VP++V LG +W G Y+T A Sbjct: 131 RFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMA 187
>UN93B_MOUSE (Q8VCW4) UNC93 homolog B1 (UNC-93B protein)| Length = 598 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +1 Query: 361 RRLGSRGALVVGTSGYALFILANLLPTWYTMVPASVYLGFTSSLMWVGQGTYLT 522 R G++ + + YALF+ N +YT+VP++V LG +W G Y+T Sbjct: 131 RFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYIT 184
>SH2P1_XENLA (Q4QR29) SH2 domain-binding protein 1| Length = 1157 Score = 33.1 bits (74), Expect = 0.50 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = -2 Query: 441 RWEEVGEDEERVAAGSDDERAPRPQPPHHGXXXRREDGEGGVQDPHGD 298 R ++ GE EE V SD+E APR + G E GEGG + G+ Sbjct: 910 RSKKNGEFEEFVNDDSDEELAPRKKKRKKGGSSSGEQGEGGDEGEGGE 957
>T2EA_MOUSE (Q9D0D5) Transcription initiation factor IIE alpha subunit| (TFIIE-alpha) (General transcription factor IIE 56 kDa subunit) Length = 440 Score = 32.3 bits (72), Expect = 0.86 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Frame = -2 Query: 495 HEGRSKTQVD*SRHHSVPRWEEVGEDEERVAAGSDDERAPRP---QPPHHGXXXRREDGE 325 HE ++ + S + P G D E + SDD+ PRP PPHH ED E Sbjct: 328 HEKKTSSVTAGSVGAAAPVTAANGSDSESETSESDDDSPPRPAAAAPPHHHRDEDEEDEE 387
>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170) Length = 1214 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/74 (27%), Positives = 29/74 (39%) Frame = -2 Query: 519 EIRALADPHEGRSKTQVD*SRHHSVPRWEEVGEDEERVAAGSDDERAPRPQPPHHGXXXR 340 ++ ADP G + + + R EE G DE RV + DE+ +P G Sbjct: 724 KVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIE 783 Query: 339 REDGEGGVQDPHGD 298 E E + P D Sbjct: 784 EEAKEKTSEAPKKD 797
>VNUC_EBOSB (Q9QP77) Nucleoprotein (Nucleocapsid protein)| Length = 738 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 393 DDERAPRPQPPHHGXXXRREDGEGGVQDPHGDGAQ 289 DD+ RP PP G R G+QDP DGA+ Sbjct: 490 DDDDDSRPGPPDRGQNKERAARTYGLQDPTLDGAK 524
>HANG_DROME (Q9VXG1) Zinc finger protein hangover| Length = 1959 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -2 Query: 435 EEVGEDEERVAAGSDDERAPRPQPPHHGXXXRREDGEGGVQDPHGDGAQ 289 EE +D + ++G DD+ + EDGEG +D GDG + Sbjct: 1641 EEDSDDLDEDSSGDDDDSSGTGDDDDDDDSDDDEDGEGEDEDEEGDGGE 1689
>GLYG4_SOYBN (P02858) Glycinin G4 precursor [Contains: Glycinin A5 subunit;| Glycinin A4 subunit; Glycinin B3 subunit] Length = 562 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = -2 Query: 444 PRWEEVGEDEERVAAGSDDERAPR--PQPPHHGXXXRREDGEGGVQDP 307 P+W+E +++E +DE+ P P+ P HG + ED + P Sbjct: 274 PKWQEQQDEDEDEDEDDEDEQIPSHPPRRPSHGKREQDEDEDEDEDKP 321
>WDR43_HUMAN (Q15061) WD-repeat protein 43| Length = 720 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = -2 Query: 192 GVAPSQAARSXIGRR*EGHGSRLLLLVAAGAHCHPAAKLSLPC 64 G AP +A GR G+R + G C P A +PC Sbjct: 20 GAAPPRAGAPAHGRTRGCSGARAAMAAGGGGSCDPLAPAGVPC 62
>IE68_PRVKA (P24827) Immediate-early protein RSP40| Length = 364 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 Query: 435 EEVGEDEERVAAGSDDERAPRPQPPHHGXXXRREDGEGGVQDPHGDG 295 EE G+D + + G DD +PP G DGEG D GDG Sbjct: 261 EEDGDDFDGASVGDDDVF----EPPEDGS-----DGEGSGSDDGGDG 298
>IP3KC_HUMAN (Q96DU7) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (InsP 3-kinase C) (IP3K-C) Length = 683 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -2 Query: 390 DERAPRPQPPHHGXXXRREDGEGGVQDPHGDGAQVALGVECAL 262 D A R QP G + +D +G P DG+Q A G +C L Sbjct: 254 DTEAARKQPGTGGFQIQ-QDTDGSWTQPSTDGSQTAPGTDCLL 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,360,625 Number of Sequences: 219361 Number of extensions: 1001873 Number of successful extensions: 2969 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2845 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2953 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)