ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK109171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 90 9e-15
4emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 90 9e-15
5dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
6emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 82 2e-12
7dbj|AK107030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
8ref|XM_469081.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.47
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.47
10gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genom... 44 0.47
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
12dbj|AK120547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
13gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, com... 42 1.8
14ref|NM_188624.1| Oryza sativa (japonica cultivar-group), Ozsa822... 42 1.8
15gb|DQ213583.1| Taeniopygia guttata clone 0058P0019E05 laminin re... 42 1.8
16ref|NM_188839.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
17gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, com... 42 1.8
18dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.8
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
20dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
21dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
22dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
23gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.8
24gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 7.3
25gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 7.3
26gb|AC116668.6| Trypanosoma brucei chromosome 5 clone RPCI93-45E2... 40 7.3
27gb|AC159452.1| Trypanosoma brucei chromosome 5 clone RPCI93-5K5,... 40 7.3
28gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, co... 40 7.3
29gb|BC067653.1| Danio rerio hypothetical protein LOC407676, mRNA ... 40 7.3
30ref|XM_838238.1| Leishmania major strain Friedlin hypothetical p... 40 7.3
31ref|XM_750121.1| Aspergillus fumigatus Af293 amino acid permease... 40 7.3
32emb|AJ243886.1|PAM243886 Periplaneta americana mRNA for putative... 40 7.3
33emb|AJ243885.1|PAM243885 Periplaneta americana mRNA for putative... 40 7.3
34emb|AJ243884.1|PAM243884 Periplaneta americana mRNA for putative... 40 7.3
35emb|AL117350.12|HSJ803J11 Human DNA sequence from clone RP4-803J... 40 7.3
36emb|AJ237815.1|PAD237815 Porcine adenovirus serotype 3 complete ... 40 7.3
37gb|AC006831.2| Caenorhabditis elegans cosmid ZK121, complete seq... 40 7.3
38ref|XM_680020.1| PREDICTED: Danio rerio similar to fibropellin I... 40 7.3
39gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.3
40dbj|AK084929.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 40 7.3
41ref|NM_065741.1| Caenorhabditis elegans ZK121.2 (ZK121.2) mRNA, ... 40 7.3
42gb|BC094169.1| Xenopus laevis cDNA clone MGC:115330 IMAGE:694890... 40 7.3
43gb|AC012065.8| Homo sapiens BAC clone RP11-130L8 from 2, complet... 40 7.3
44gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.3
45gb|U82628.1|PAU82628 Porcine adenovirus 3 100K protein gene, com... 40 7.3
46gb|AF083132.1|AF083132 Porcine adenovirus 3 strain 6618, complet... 40 7.3
47gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, par... 40 7.3
48dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.3
49gb|BC039142.1| Mus musculus, clone IMAGE:4206343, mRNA 40 7.3
50dbj|AB026117.1| Porcine adenovirus 3 DNA, complete genome 40 7.3 
>dbj|AK109171.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-H06, full
           insert sequence
          Length = 739

 Score =  145 bits (73), Expect = 2e-31
 Identities = 208/254 (81%)
 Strand = Plus / Plus

                                                                       
Query: 184 agccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcctac 243
           ||||||||||||||| | ||| |||| || || || ||||||||||||||||||||||||
Sbjct: 153 agccacgccggcgacctgcacgtcctctccgccgcgttcctcttcgtcttctccgcctac 212

                                                                       
Query: 244 ctccccacgcagaacctgcagagcacactcaacaccgagggcaacctgggcgccgtctcc 303
             | || ||||||||||  ||||| |  |||||||||||||| |||||||| | || |||
Sbjct: 213 tgcgccgcgcagaacctcgagagctcggtcaacaccgagggcgacctgggcacggtgtcc 272

                                                                       
Query: 304 atggggatcctgtacgcctccttcaccgtcttcacggcgacngcngcngccgtggtgcgg 363
           |||||||| |||||| ||||||||||  ||||| ||| | | ||  |  |||||||   |
Sbjct: 273 atggggattctgtacacctccttcacgctcttctcggtggccgcgtcgcccgtggtcacg 332

                                                                       
Query: 364 cggctggggtcgaggggcgcgctcgtcgtcggaaccagcggctacgcgctcttcatcctc 423
            |||| || || | | |||||||||||||||| |||||||||||||   |||||||||||
Sbjct: 333 tggctcggctccaagcgcgcgctcgtcgtcggcaccagcggctacgtcatcttcatcctc 392

                         
Query: 424 gccaacctcctccc 437
           ||||||||| ||||
Sbjct: 393 gccaacctcgtccc 406



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 ccgcgacgaggaggagcaggcggc 131
           |||||||||||||||| |||||||
Sbjct: 74  ccgcgacgaggaggaggaggcggc 97
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                            
Query: 280      gagggcaacctgggcgccgtctccatggggatcctgtacgcctccttcaccgtcttcacg 339
                |||||| |||||||| | || |||||||||||||||||| ||||||||||  ||||| ||
Sbjct: 23339544 gagggcgacctgggcacggtgtccatggggatcctgtacacctccttcacgctcttcgcg 23339485

                                                                            
Query: 340      gcgacngcngcngccgtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaacc 399
                | ||| ||  |  |||||||   | |||| || || | | |||||||||||||||| |||
Sbjct: 23339484 gtgaccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcacc 23339425

                                                      
Query: 400      agcggctacgcgctcttcatcctcgccaacctcctccc 437
                ||||||||||   ||||||||||||| |||||| ||||
Sbjct: 23339424 agcggctacgtcatcttcatcctcgctaacctcgtccc 23339387



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/158 (81%)
 Strand = Plus / Minus

                                                                            
Query: 280      gagggcaacctgggcgccgtctccatggggatcctgtacgcctccttcaccgtcttcacg 339
                |||||| |||||||| | || ||||||||||| |||||| ||||||||||  ||||| ||
Sbjct: 23345483 gagggcgacctgggcacggtgtccatggggattctgtacacctccttcacgctcttctcg 23345424

                                                                            
Query: 340      gcgacngcngcngccgtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaacc 399
                | | | ||  |  |||||||   | |||| || || | | |||||||||||||||| |||
Sbjct: 23345423 gtggccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcacc 23345364

                                                      
Query: 400      agcggctacgcgctcttcatcctcgccaacctcctccc 437
                ||||||||||   |||||||||||||||||||| ||||
Sbjct: 23345363 agcggctacgtcatcttcatcctcgccaacctcgtccc 23345326



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 184      agccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcctac 243
                ||||||||||||||| | ||| |||| || || || ||||||||||||||||||||||||
Sbjct: 23345693 agccacgccggcgacctgcacgtcctctccgccgcgttcctcttcgtcttctccgcctac 23345634

                                 
Query: 244      ctccccacgcagaacct 260
                  | || ||||||||||
Sbjct: 23345633 tgcgccgcgcagaacct 23345617



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 215      cggccttcctcttcgtcttctccgcctacctccccacgcagaacctgcagagcacactca 274
                ||||||||||||||||||||  |||||||| | || | |||||||||||||||||  |||
Sbjct: 23348902 cggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctgcagagcaccgtca 23348843

                    
Query: 275      acac 278
                ||||
Sbjct: 23348842 acac 23348839



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                            
Query: 182      ggagccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcct 241
                |||||||||| |||||| | ||| |||| || || || ||||||||| ||||||||||||
Sbjct: 23339742 ggagccacgcgggcgacctgcacgtcctctccgccgcgttcctcttcatcttctccgcct 23339683

                                                       
Query: 242      acctccccacgcagaacctgcagagcacactcaacaccg 280
                ||  | || |||||||||| |||||| |  |||||||||
Sbjct: 23339682 actgcgccgcgcagaacctccagagctcggtcaacaccg 23339644



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                            
Query: 355      gtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaaccagcggctacgcgctc 414
                |||||||||||| ||||||| ||| ||||||||||  |||| |||  |||||||   |||
Sbjct: 23348643 gtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctc 23348584

                                       
Query: 415      ttcatcctcgccaacctcctccc 437
                ||||||  |||||||||| ||||
Sbjct: 23348583 ttcatcgccgccaacctcgtccc 23348561



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 108      ccgcgacgaggaggagcaggcggc 131
                |||||||||||||||| |||||||
Sbjct: 23345772 ccgcgacgaggaggaggaggcggc 23345749
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                            
Query: 280      gagggcaacctgggcgccgtctccatggggatcctgtacgcctccttcaccgtcttcacg 339
                |||||| |||||||| | || |||||||||||||||||| ||||||||||  ||||| ||
Sbjct: 23267735 gagggcgacctgggcacggtgtccatggggatcctgtacacctccttcacgctcttcgcg 23267676

                                                                            
Query: 340      gcgacngcngcngccgtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaacc 399
                | ||| ||  |  |||||||   | |||| || || | | |||||||||||||||| |||
Sbjct: 23267675 gtgaccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcacc 23267616

                                                      
Query: 400      agcggctacgcgctcttcatcctcgccaacctcctccc 437
                ||||||||||   ||||||||||||| |||||| ||||
Sbjct: 23267615 agcggctacgtcatcttcatcctcgctaacctcgtccc 23267578



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/158 (81%)
 Strand = Plus / Minus

                                                                            
Query: 280      gagggcaacctgggcgccgtctccatggggatcctgtacgcctccttcaccgtcttcacg 339
                |||||| |||||||| | || ||||||||||| |||||| ||||||||||  ||||| ||
Sbjct: 23273674 gagggcgacctgggcacggtgtccatggggattctgtacacctccttcacgctcttctcg 23273615

                                                                            
Query: 340      gcgacngcngcngccgtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaacc 399
                | | | ||  |  |||||||   | |||| || || | | |||||||||||||||| |||
Sbjct: 23273614 gtggccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcacc 23273555

                                                      
Query: 400      agcggctacgcgctcttcatcctcgccaacctcctccc 437
                ||||||||||   |||||||||||||||||||| ||||
Sbjct: 23273554 agcggctacgtcatcttcatcctcgccaacctcgtccc 23273517



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 184      agccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcctac 243
                ||||||||||||||| | ||| |||| || || || ||||||||||||||||||||||||
Sbjct: 23273884 agccacgccggcgacctgcacgtcctctccgccgcgttcctcttcgtcttctccgcctac 23273825

                                 
Query: 244      ctccccacgcagaacct 260
                  | || ||||||||||
Sbjct: 23273824 tgcgccgcgcagaacct 23273808



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 215      cggccttcctcttcgtcttctccgcctacctccccacgcagaacctgcagagcacactca 274
                ||||||||||||||||||||  |||||||| | || | |||||||||||||||||  |||
Sbjct: 23277093 cggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctgcagagcaccgtca 23277034

                    
Query: 275      acac 278
                ||||
Sbjct: 23277033 acac 23277030



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                            
Query: 182      ggagccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcct 241
                |||||||||| |||||| | ||| |||| || || || ||||||||| ||||||||||||
Sbjct: 23267933 ggagccacgcgggcgacctgcacgtcctctccgccgcgttcctcttcatcttctccgcct 23267874

                                                       
Query: 242      acctccccacgcagaacctgcagagcacactcaacaccg 280
                ||  | || |||||||||| |||||| |  |||||||||
Sbjct: 23267873 actgcgccgcgcagaacctccagagctcggtcaacaccg 23267835



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                            
Query: 355      gtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaaccagcggctacgcgctc 414
                |||||||||||| ||||||| ||| ||||||||||  |||| |||  |||||||   |||
Sbjct: 23276834 gtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctc 23276775

                                       
Query: 415      ttcatcctcgccaacctcctccc 437
                ||||||  |||||||||| ||||
Sbjct: 23276774 ttcatcgccgccaacctcgtccc 23276752



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 108      ccgcgacgaggaggagcaggcggc 131
                |||||||||||||||| |||||||
Sbjct: 23273963 ccgcgacgaggaggaggaggcggc 23273940
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                          
Query: 280    gagggcaacctgggcgccgtctccatggggatcctgtacgcctccttcaccgtcttcacg 339
              |||||| |||||||| | || |||||||||||||||||| ||||||||||  ||||| ||
Sbjct: 152662 gagggcgacctgggcacggtgtccatggggatcctgtacacctccttcacgctcttcgcg 152603

                                                                          
Query: 340    gcgacngcngcngccgtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaacc 399
              | ||| ||  |  |||||||   | |||| || || | | |||||||||||||||| |||
Sbjct: 152602 gtgaccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcacc 152543

                                                    
Query: 400    agcggctacgcgctcttcatcctcgccaacctcctccc 437
              ||||||||||   ||||||||||||| |||||| ||||
Sbjct: 152542 agcggctacgtcatcttcatcctcgctaacctcgtccc 152505



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/158 (81%)
 Strand = Plus / Minus

                                                                          
Query: 280    gagggcaacctgggcgccgtctccatggggatcctgtacgcctccttcaccgtcttcacg 339
              |||||| |||||||| | || ||||||||||| |||||| ||||||||||  ||||| ||
Sbjct: 158601 gagggcgacctgggcacggtgtccatggggattctgtacacctccttcacgctcttctcg 158542

                                                                          
Query: 340    gcgacngcngcngccgtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaacc 399
              | | | ||  |  |||||||   | |||| || || | | |||||||||||||||| |||
Sbjct: 158541 gtggccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcacc 158482

                                                    
Query: 400    agcggctacgcgctcttcatcctcgccaacctcctccc 437
              ||||||||||   |||||||||||||||||||| ||||
Sbjct: 158481 agcggctacgtcatcttcatcctcgccaacctcgtccc 158444



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                          
Query: 184    agccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcctac 243
              ||||||||||||||| | ||| |||| || || || ||||||||||||||||||||||||
Sbjct: 158811 agccacgccggcgacctgcacgtcctctccgccgcgttcctcttcgtcttctccgcctac 158752

                               
Query: 244    ctccccacgcagaacct 260
                | || ||||||||||
Sbjct: 158751 tgcgccgcgcagaacct 158735



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                          
Query: 215    cggccttcctcttcgtcttctccgcctacctccccacgcagaacctgcagagcacactca 274
              ||||||||||||||||||||  |||||||| | || | |||||||||||||||||  |||
Sbjct: 162020 cggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctgcagagcaccgtca 161961

                  
Query: 275    acac 278
              ||||
Sbjct: 161960 acac 161957



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                          
Query: 182    ggagccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcct 241
              |||||||||| |||||| | ||| |||| || || || ||||||||| ||||||||||||
Sbjct: 152860 ggagccacgcgggcgacctgcacgtcctctccgccgcgttcctcttcatcttctccgcct 152801

                                                     
Query: 242    acctccccacgcagaacctgcagagcacactcaacaccg 280
              ||  | || |||||||||| |||||| |  |||||||||
Sbjct: 152800 actgcgccgcgcagaacctccagagctcggtcaacaccg 152762



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                          
Query: 355    gtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaaccagcggctacgcgctc 414
              |||||||||||| ||||||| ||| ||||||||||  |||| |||  |||||||   |||
Sbjct: 161761 gtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctc 161702

                                     
Query: 415    ttcatcctcgccaacctcctccc 437
              ||||||  |||||||||| ||||
Sbjct: 161701 ttcatcgccgccaacctcgtccc 161679



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 108    ccgcgacgaggaggagcaggcggc 131
              |||||||||||||||| |||||||
Sbjct: 158890 ccgcgacgaggaggaggaggcggc 158867
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>dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H05, full
           insert sequence
          Length = 1754

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Plus

                                                                       
Query: 355 gtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaaccagcggctacgcgctc 414
           |||||||||||| ||||||| ||| ||||||||||  |||| |||  |||||||   |||
Sbjct: 348 gtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctc 407

                                                                       
Query: 415 ttcatcctcgccaacctcctcccaacgtggtacactatggtgccggcttcagtctacctg 474
           ||||||  |||||||||| ||||  | |||||||| |||||||| || ||  | || |||
Sbjct: 408 ttcatcgccgccaacctcgtcccctcctggtacacaatggtgccagcctccctgtatctg 467

                                                                    
Query: 475 ggttttacttcttccctcatgtgggtcggccagggcacgtatctcacgtccgctgcc 531
           ||||||||| | ||  |||| ||||| || ||||| || ||||||||||| ||||||
Sbjct: 468 ggttttactgcatcgatcatctgggttgggcagggtacatatctcacgtctgctgcc 524



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 215 cggccttcctcttcgtcttctccgcctacctccccacgcagaacctgcagagcacactca 274
           ||||||||||||||||||||  |||||||| | || | |||||||||||||||||  |||
Sbjct: 208 cggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctgcagagcaccgtca 267

               
Query: 275 acac 278
           ||||
Sbjct: 268 acac 271
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/158 (81%)
 Strand = Plus / Plus

                                                                          
Query: 280    gagggcaacctgggcgccgtctccatggggatcctgtacgcctccttcaccgtcttcacg 339
              |||||| |||||||| | || ||||||||||| |||||| ||||||||||  ||||| ||
Sbjct: 156676 gagggcgacctgggcacggtgtccatggggattctgtacacctccttcacgctcttctcg 156735

                                                                          
Query: 340    gcgacngcngcngccgtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaacc 399
              | | | ||  |  |||||||   | |||| || || | | |||||||||||||||| |||
Sbjct: 156736 gtggccgcgtcgcccgtggtcacgtggctcggctccaagcgcgcgctcgtcgtcggcacc 156795

                                                    
Query: 400    agcggctacgcgctcttcatcctcgccaacctcctccc 437
              ||||||||||   |||||||||||||||||||| ||||
Sbjct: 156796 agcggctacgtcatcttcatcctcgccaacctcgtccc 156833



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                          
Query: 184    agccacgccggcgacgttcacctcctgtcggcggccttcctcttcgtcttctccgcctac 243
              ||||||||||||||| | ||| |||| || || || ||||||||||||||||||||||||
Sbjct: 156466 agccacgccggcgacctgcacgtcctctccgccgcgttcctcttcgtcttctccgcctac 156525

                               
Query: 244    ctccccacgcagaacct 260
                | || ||||||||||
Sbjct: 156526 tgcgccgcgcagaacct 156542



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                          
Query: 215    cggccttcctcttcgtcttctccgcctacctccccacgcagaacctgcagagcacactca 274
              ||||||||||||||||||||  |||||||| | || | |||||||||||||||||  |||
Sbjct: 153257 cggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctgcagagcaccgtca 153316

                  
Query: 275    acac 278
              ||||
Sbjct: 153317 acac 153320



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                          
Query: 355    gtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaaccagcggctacgcgctc 414
              |||||||||||| ||||||| ||| ||||||||||  |||| |||  |||||||   |||
Sbjct: 153516 gtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctc 153575

                                     
Query: 415    ttcatcctcgccaacctcctccc 437
              ||||||  |||||||||| ||||
Sbjct: 153576 ttcatcgccgccaacctcgtccc 153598



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    ccgcgacgaggaggagcaggcggc 131
              |||||||||||||||| |||||||
Sbjct: 156387 ccgcgacgaggaggaggaggcggc 156410
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>dbj|AK107030.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A11, full
           insert sequence
          Length = 805

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 355 gtggtgcggcggctggggtcgaggggcgcgctcgtcgtcggaaccagcggctacgcgctc 414
           |||||||||||| ||||||| ||| ||||||||||  |||| |||  |||||||   |||
Sbjct: 226 gtggtgcggcggatggggtccaggcgcgcgctcgtgctcggcacctccggctacctcctc 167

                                  
Query: 415 ttcatcctcgccaacctcctccc 437
           ||||||  |||||||||| ||||
Sbjct: 166 ttcatcgccgccaacctcgtccc 144



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 215 cggccttcctcttcgtcttctccgcctacctccccacgcagaacctg 261
           ||||||||||||||||||||  |||||||| | || | |||||||||
Sbjct: 336 cggccttcctcttcgtcttcctcgcctaccacgccgcccagaacctg 290
to top
>ref|XM_469081.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2836

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 117  ggaggagcaggcggctgccgtg 138
            ||||||||||||||||||||||
Sbjct: 1647 ggaggagcaggcggctgccgtg 1668
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 117      ggaggagcaggcggctgccgtg 138
                ||||||||||||||||||||||
Sbjct: 25353837 ggaggagcaggcggctgccgtg 25353816
to top
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete
             sequence
          Length = 152828

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 117   ggaggagcaggcggctgccgtg 138
             ||||||||||||||||||||||
Sbjct: 89523 ggaggagcaggcggctgccgtg 89544
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 117      ggaggagcaggcggctgccgtg 138
                ||||||||||||||||||||||
Sbjct: 25445146 ggaggagcaggcggctgccgtg 25445125
to top
>dbj|AK120547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129M03, full
            insert sequence
          Length = 2975

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 117  ggaggagcaggcggctgccgtg 138
            ||||||||||||||||||||||
Sbjct: 1809 ggaggagcaggcggctgccgtg 1830
to top
>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence
          Length = 235823

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 257    acctgcagagcacactcaaca 277
              |||||||||||||||||||||
Sbjct: 200184 acctgcagagcacactcaaca 200164
to top
>ref|NM_188624.1| Oryza sativa (japonica cultivar-group), Ozsa8227 predicted mRNA
          Length = 756

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 ccttcctcttcgtcttctccg 238
           |||||||||||||||||||||
Sbjct: 83  ccttcctcttcgtcttctccg 103
to top
>gb|DQ213583.1| Taeniopygia guttata clone 0058P0019E05 laminin receptor 1-like
           mRNA, complete sequence
          Length = 1038

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aggaggagcaggcggctgccg 136
           |||||||||||||||||||||
Sbjct: 716 aggaggagcaggcggctgccg 736
to top
>ref|NM_188839.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 477

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 217 gccttcctcttcgtcttctcc 237
           |||||||||||||||||||||
Sbjct: 450 gccttcctcttcgtcttctcc 430
to top
>gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, complete sequence
          Length = 199219

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 257  acctgcagagcacactcaaca 277
            |||||||||||||||||||||
Sbjct: 2795 acctgcagagcacactcaaca 2775
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    tgcagagcacactcaacaccg 280
              |||||||||||||||||||||
Sbjct: 757526 tgcagagcacactcaacaccg 757546
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 217      gccttcctcttcgtcttctcc 237
                |||||||||||||||||||||
Sbjct: 26731444 gccttcctcttcgtcttctcc 26731464
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 218     ccttcctcttcgtcttctccg 238
               |||||||||||||||||||||
Sbjct: 7296863 ccttcctcttcgtcttctccg 7296883
to top
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   ccttcctcttcgtcttctccg 238
             |||||||||||||||||||||
Sbjct: 98293 ccttcctcttcgtcttctccg 98313
to top
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1003_C06
          Length = 143168

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   gccttcctcttcgtcttctcc 237
             |||||||||||||||||||||
Sbjct: 78301 gccttcctcttcgtcttctcc 78321
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    tgcagagcacactcaacaccg 280
              |||||||||||||||||||||
Sbjct: 789166 tgcagagcacactcaacaccg 789186
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    gacgaggaggagcaggcggc 131
              ||||||||||||||||||||
Sbjct: 917832 gacgaggaggagcaggcggc 917813
to top
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     gccttcctcttcgtcttctc 236
               ||||||||||||||||||||
Sbjct: 1305716 gccttcctcttcgtcttctc 1305697
to top
>gb|AC116668.6| Trypanosoma brucei chromosome 5 clone RPCI93-45E22, complete sequence
          Length = 141628

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    gccttcctcttcgtcttctc 236
              ||||||||||||||||||||
Sbjct: 120833 gccttcctcttcgtcttctc 120814
to top
>gb|AC159452.1| Trypanosoma brucei chromosome 5 clone RPCI93-5K5, complete sequence
          Length = 158740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  gccttcctcttcgtcttctc 236
            ||||||||||||||||||||
Sbjct: 7939 gccttcctcttcgtcttctc 7920
to top
>gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, complete sequence
          Length = 202071

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    gggatcctgtacgcctcctt 326
              ||||||||||||||||||||
Sbjct: 146769 gggatcctgtacgcctcctt 146750
to top
>gb|BC067653.1| Danio rerio hypothetical protein LOC407676, mRNA (cDNA clone
            IMAGE:6963366), partial cds
          Length = 1310

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 267  cacactcaacaccgagggcaacct 290
            |||||||||||||||| |||||||
Sbjct: 980  cacactcaacaccgagagcaacct 1003
to top
>ref|XM_838238.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1155)
            partial mRNA
          Length = 8865

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  gacgaggaggagcaggcggc 131
            ||||||||||||||||||||
Sbjct: 5549 gacgaggaggagcaggcggc 5530
to top
>ref|XM_750121.1| Aspergillus fumigatus Af293 amino acid permease Dip5 (Afu2g08800)
            partial mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  tcctcttcgtcttctccgcc 240
            ||||||||||||||||||||
Sbjct: 1022 tcctcttcgtcttctccgcc 1041
to top
>emb|AJ243886.1|PAM243886 Periplaneta americana mRNA for putative transcription factor
           (Pa-en2.b gene)
          Length = 745

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 ccgcgacgaggaggagcaggcggc 131
           |||||| |||||||||||||||||
Sbjct: 562 ccgcgaggaggaggagcaggcggc 585
to top
>emb|AJ243885.1|PAM243885 Periplaneta americana mRNA for putative transcription factor
           (Pa-en2.a gene)
          Length = 1050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 ccgcgacgaggaggagcaggcggc 131
           |||||| |||||||||||||||||
Sbjct: 867 ccgcgaggaggaggagcaggcggc 890
to top
>emb|AJ243884.1|PAM243884 Periplaneta americana mRNA for putative transcription factor (Pa-en2
            gene)
          Length = 1824

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 108  ccgcgacgaggaggagcaggcggc 131
            |||||| |||||||||||||||||
Sbjct: 1528 ccgcgaggaggaggagcaggcggc 1551
to top
>emb|AL117350.12|HSJ803J11 Human DNA sequence from clone RP4-803J11 on chromosome 1 Contains the
             3' end of the RAB4A gene for RAB4A, member RAS oncogene
             family, a  novel gene, a novel gene (LOC126731) and a CpG
             island, complete sequence
          Length = 106441

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   gctggggtcgaggggcgcgc 385
             ||||||||||||||||||||
Sbjct: 68401 gctggggtcgaggggcgcgc 68420
to top
>emb|AJ237815.1|PAD237815 Porcine adenovirus serotype 3 complete genome, strain IAF
          Length = 34094

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   cccgccgcgacgaggaggagcagg 127
             ||||||| ||||||||||||||||
Sbjct: 24311 cccgccgggacgaggaggagcagg 24334
to top
>gb|AC006831.2| Caenorhabditis elegans cosmid ZK121, complete sequence
          Length = 7878

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   taaaactatttgctgtctct 44
            ||||||||||||||||||||
Sbjct: 4934 taaaactatttgctgtctct 4915
to top
>ref|XM_680020.1| PREDICTED: Danio rerio similar to fibropellin Ia (LOC557044), mRNA
          Length = 2439

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 267 cacactcaacaccgagggcaacct 290
           |||||||||||||||| |||||||
Sbjct: 219 cacactcaacaccgagagcaacct 242
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     caccgagggcaacctgggcg 295
               ||||||||||||||||||||
Sbjct: 4838339 caccgagggcaacctgggcg 4838320



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     caccgagggcaacctgggcg 295
               ||||||||||||||||||||
Sbjct: 4837511 caccgagggcaacctgggcg 4837492
to top
>dbj|AK084929.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430013O20 product:hypothetical protein,
            full insert sequence
          Length = 2364

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 307  gggatcctgtacgcctcctt 326
            ||||||||||||||||||||
Sbjct: 2159 gggatcctgtacgcctcctt 2140
to top
>ref|NM_065741.1| Caenorhabditis elegans ZK121.2 (ZK121.2) mRNA, complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   taaaactatttgctgtctct 44
            ||||||||||||||||||||
Sbjct: 1600 taaaactatttgctgtctct 1581
to top
>gb|BC094169.1| Xenopus laevis cDNA clone MGC:115330 IMAGE:6948906, complete cds
          Length = 4388

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  cgcctccttcaccgtcttca 337
            ||||||||||||||||||||
Sbjct: 1284 cgcctccttcaccgtcttca 1303
to top
>gb|AC012065.8| Homo sapiens BAC clone RP11-130L8 from 2, complete sequence
          Length = 206021

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    aggaggagcaggcggctgcc 135
              ||||||||||||||||||||
Sbjct: 142948 aggaggagcaggcggctgcc 142967
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    gcgccgtctccatggggatc 312
              ||||||||||||||||||||
Sbjct: 632249 gcgccgtctccatggggatc 632268
to top
>gb|U82628.1|PAU82628 Porcine adenovirus 3 100K protein gene, complete cds
          Length = 2517

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 cccgccgcgacgaggaggagcagg 127
           ||||||| ||||||||||||||||
Sbjct: 260 cccgccgggacgaggaggagcagg 283
to top
>gb|AF083132.1|AF083132 Porcine adenovirus 3 strain 6618, complete genome
          Length = 34094

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   cccgccgcgacgaggaggagcagg 127
             ||||||| ||||||||||||||||
Sbjct: 24315 cccgccgggacgaggaggagcagg 24338
to top
>gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, partial cds
          Length = 193824

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    cctccccacgcagaacctgc 262
              ||||||||||||||||||||
Sbjct: 161099 cctccccacgcagaacctgc 161080
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     ccgagggcaacctgggcgcc 297
               ||||||||||||||||||||
Sbjct: 2739258 ccgagggcaacctgggcgcc 2739277
to top
>gb|BC039142.1| Mus musculus, clone IMAGE:4206343, mRNA
          Length = 985

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 408 cgcgctcttcatcctcgccaacctcctc 435
           ||||||||||||| |||||| |||||||
Sbjct: 228 cgcgctcttcatcttcgccatcctcctc 255
to top
>dbj|AB026117.1| Porcine adenovirus 3 DNA, complete genome
          Length = 34094

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   cccgccgcgacgaggaggagcagg 127
             ||||||| ||||||||||||||||
Sbjct: 24311 cccgccgggacgaggaggagcagg 24334


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,214,400
Number of Sequences: 3902068
Number of extensions: 3214400
Number of successful extensions: 67807
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66918
Number of HSP's gapped (non-prelim): 889
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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