Clone Information

BLAST Search Result

Clone Name	bart09c01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulator...	233	2e-61
2	PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit...	152	4e-37
3	PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit...	152	4e-37
4	RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8	152	5e-37
5	PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit...	151	9e-37
6	RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8	146	4e-35
7	RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8	133	2e-31
8	RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8	130	2e-30
9	RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8	129	3e-30
10	IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 s...	81	1e-15
11	IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...	80	2e-15
12	IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 s...	80	4e-15
13	CSN6B_ARATH (Q8W1P0) COP9 signalosome complex subunit 6b (Signal...	59	6e-09
14	CSN6A_ARATH (Q8W206) COP9 signalosome complex subunit 6a (Signal...	59	8e-09
15	CSN6_XENLA (Q6NUC2) COP9 signalosome complex subunit 6 (Signalos...	56	6e-08
16	CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalos...	55	1e-07
17	CSN6_HUMAN (Q7L5N1) COP9 signalosome complex subunit 6 (Signalos...	54	2e-07
18	IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 s...	46	7e-05
19	CSN6_DROME (Q9VCY3) COP9 signalosome complex subunit 6 (Signalos...	45	1e-04
20	IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 s...	44	3e-04
21	IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 s...	44	3e-04
22	IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 s...	44	3e-04
23	CSN6_CAEEL (Q95PZ0) COP9 signalosome complex subunit 6 (Signalos...	44	3e-04
24	PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit...	37	0.031
25	CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-...	36	0.052
26	RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Pr...	34	0.26
27	CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-...	34	0.26
28	CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-...	34	0.26
29	YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III	33	0.34
30	CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-...	33	0.34
31	CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-...	33	0.34
32	RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11	33	0.44
33	CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-...	33	0.44
34	PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit...	32	0.75
35	EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyr...	32	0.98
36	EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor t...	32	0.98
37	PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit...	32	0.98
38	PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit...	32	0.98
39	PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit...	32	0.98
40	RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11	32	1.3
41	CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	31	1.7
42	RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MP...	31	1.7
43	CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	30	2.9
44	HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation prote...	30	2.9
45	CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	30	2.9
46	G3P_PSEAE (P27726) Glyceraldehyde-3-phosphate dehydrogenase (EC ...	30	3.7
47	CCA2_THEAC (Q9V302) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21...	30	3.7
48	CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4...	30	3.7
49	HPAB2_PSESM (Q8RSY1) Effector protein hopAB2 (Avirulence protein...	30	4.9
50	EFNA1_HUMAN (P20827) Ephrin-A1 precursor (EPH-related receptor t...	30	4.9
51	CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4...	30	4.9
52	REXO4_MOUSE (Q6PAQ4) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease...	29	6.4
53	AAA_STAS1 (Q49UX4) N-acetylmuramoyl-L-alanine amidase aaa precur...	29	6.4
54	C99A1_SORBI (O48957) Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Frag...	29	8.3

>PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulatory subunit 7|
           (26S proteasome regulatory subunit rpn8) (MOV34 protein)
          Length = 308

 Score =  233 bits (595), Expect = 2e-61
 Identities = 111/128 (86%), Positives = 118/128 (92%)
 Frame = +1

Query: 121 MDVVKAAQLSGRTLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNS 300
           MDV+K  Q+S RT+EKVVVHPLVLLSIVDHY RVA+D+ KRVVGVLLG+SSRGVVDVTNS
Sbjct: 1   MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60

Query: 301 YAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFT 480
           YAVPFEEDDKDP IWFLDHNYHESMF MFKRINA EHVVGWYSTGPKL+ENDLDVHALF 
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFN 120

Query: 481 NYVPNPVL 504
            YVPNPVL
Sbjct: 121 GYVPNPVL 128

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>PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40) (Mov34
           protein homolog)
          Length = 324

 Score =  152 bits (385), Expect = 4e-37
 Identities = 69/116 (59%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = +1

Query: 160 LEKVVVHPLVLLSIVDHYXRVAR-DTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 336
           ++KVVVHPLVLLS+VDH+ R+ +   +KRVVGVLLG+  + V+DV+NS+AVPF+EDDKD 
Sbjct: 6   VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65

Query: 337 RIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVL 504
            +WFLDH+Y E+M+ MFK++NA E +VGWY TGPKL +ND+ ++ L   Y PN VL
Sbjct: 66  SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVL 121

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>PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40) (Mov34
           protein)
          Length = 321

 Score =  152 bits (385), Expect = 4e-37
 Identities = 69/116 (59%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = +1

Query: 160 LEKVVVHPLVLLSIVDHYXRVAR-DTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 336
           ++KVVVHPLVLLS+VDH+ R+ +   +KRVVGVLLG+  + V+DV+NS+AVPF+EDDKD 
Sbjct: 6   VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65

Query: 337 RIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVL 504
            +WFLDH+Y E+M+ MFK++NA E +VGWY TGPKL +ND+ ++ L   Y PN VL
Sbjct: 66  SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVL 121

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>RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8|
          Length = 324

 Score =  152 bits (384), Expect = 5e-37
 Identities = 68/114 (59%), Positives = 92/114 (80%)
 Frame = +1

Query: 163 EKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 342
           ++V+VHPLVLLS VD Y R A+ T++RVVG+LLG ++  VV+V NSYA+PFEED+K+  +
Sbjct: 15  QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASV 74

Query: 343 WFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVL 504
           WFLDHN+ ESM  MFK+INA E +VGWY TGP+L+ +DL+++ L   Y+PNPVL
Sbjct: 75  WFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVL 128

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>PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40)
           (Proteasome subunit p39B) (Protein Mov34)
          Length = 337

 Score =  151 bits (382), Expect = 9e-37
 Identities = 71/118 (60%), Positives = 94/118 (79%), Gaps = 2/118 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVAR-DTRKRVVGVLLGT-SSRGVVDVTNSYAVPFEEDDK 330
           ++ KV+VHPLVLLS+VDH+ R+ +   +KRVVGVLLG   S+GV+DV+NS+AVPF+EDDK
Sbjct: 6   SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDK 65

Query: 331 DPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVL 504
           D  +WFLDH+Y E+M+ MFK++NA E VVGWY TGPKL +ND+ ++ L   Y PN VL
Sbjct: 66  DKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVL 123

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>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8|
          Length = 352

 Score =  146 bits (368), Expect = 4e-35
 Identities = 70/114 (61%), Positives = 86/114 (75%), Gaps = 2/114 (1%)
 Frame = +1

Query: 169 VVVHPLVLLSIVDHYXRVA--RDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 342
           V V PLVLLS+VDHY R    +   KRVVGVLLG +    V V+NS+AVPFEEDDKDP +
Sbjct: 16  VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSV 75

Query: 343 WFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVL 504
           WFLDHNY ESM  MFK++NA E ++GWY +GPKL+ +DLD++ LF  Y PNP+L
Sbjct: 76  WFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLL 129

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>RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8|
          Length = 326

 Score =  133 bits (335), Expect = 2e-31
 Identities = 61/108 (56%), Positives = 81/108 (75%)
 Frame = +1

Query: 163 EKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 342
           E+V V PLVLLS++DHY R+     KR VGVLLG +S   + VTNS+A+PFEED+K+P +
Sbjct: 6   EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDV 65

Query: 343 WFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNY 486
           WFLDHNY E+M  M K+INA E ++GWY +GPKL+ +DL ++ LF  Y
Sbjct: 66  WFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKY 113

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>RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8|
          Length = 337

 Score =  130 bits (327), Expect = 2e-30
 Identities = 59/111 (53%), Positives = 79/111 (71%)
 Frame = +1

Query: 163 EKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 342
           EKV + PLVLLS +DHY R      KR VGV+LG ++   + VTNS+A+PFEED+K+  +
Sbjct: 5   EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDV 64

Query: 343 WFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPN 495
           WFLDHNY E+M  M K+INA E ++GWY +GPKL+ +DL ++ LF  Y  N
Sbjct: 65  WFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQN 115

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>RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8|
          Length = 329

 Score =  129 bits (325), Expect = 3e-30
 Identities = 61/115 (53%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
 Frame = +1

Query: 163 EKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 342
           + V + PLVLLS++DHY R      KR VGV+LG S    + VTNS+A+PFEED+K+  +
Sbjct: 6   DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSFALPFEEDEKNSDV 65

Query: 343 WFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVP-NPVL 504
           WFLDHNY ESM  M K+INA E ++GWY +GPKL+ +DL ++ LF  Y   NP+L
Sbjct: 66  WFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQGNPLL 120

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>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 357

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 38/111 (34%), Positives = 68/111 (61%)
 Frame = +1

Query: 169 VVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 348
           V +HP++L SIVD Y R   +   RV+G LLGT  +  V+VTN ++VP  E + +  +  
Sbjct: 92  VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV-- 148

Query: 349 LDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPV 501
            D  + ++M+ + K+++  E ++GWY+TG  + E+ + +H  ++   PNP+
Sbjct: 149 -DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPI 198

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>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 38/111 (34%), Positives = 68/111 (61%)
 Frame = +1

Query: 169 VVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 348
           V +HP++L SIVD Y R   +   RV+G LLGT  +  V+VTN ++VP  E + +  +  
Sbjct: 96  VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV-- 152

Query: 349 LDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPV 501
            D  + ++M+ + K+++  E ++GWY+TG  + E+ + +H  ++   PNP+
Sbjct: 153 -DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPI 202

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>IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f)
          Length = 293

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = +1

Query: 175 VHPLVLLSIVDHYXRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKDPRIWFL 351
           +HPLV+ ++ D + R   D+ +RV+G LLG+    G VD+ NSYAVP  E      +   
Sbjct: 30  IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV--- 85

Query: 352 DHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPV 501
           D +YH +M     ++N+ E +VGWYSTG  +      +H  +   VPNP+
Sbjct: 86  DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPI 135

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>CSN6B_ARATH (Q8W1P0) COP9 signalosome complex subunit 6b (Signalosome subunit|
           6b) (AtCSN6b)
          Length = 317

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
 Frame = +1

Query: 175 VHPLVLLSIVDHYXRVARDTRK----------------------RVVGVLLGTSSRGVVD 288
           +HPLV+L+I DH+ RV                            RV G ++G      V+
Sbjct: 13  LHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIGLQRGRTVE 72

Query: 289 VTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVH 468
           + NS+ + F     DP +  LD ++ E    ++K++    +V+GWYSTG    E+D+ +H
Sbjct: 73  IFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIH 127

Query: 469 ALFTNYVPNPV 501
               +   +PV
Sbjct: 128 KALMDINESPV 138

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>CSN6A_ARATH (Q8W206) COP9 signalosome complex subunit 6a (Signalosome subunit|
           6a) (AtCSN6a)
          Length = 317

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
 Frame = +1

Query: 175 VHPLVLLSIVDHYXRVARDTRK----------------------RVVGVLLGTSSRGVVD 288
           +HPLV+++I DHY RV                            RV G ++G      V+
Sbjct: 13  LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVE 72

Query: 289 VTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVH 468
           + NS+ + +     DP    LD ++ E    ++K++    +++GWYSTG   +E+D+ +H
Sbjct: 73  IFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIH 127

Query: 469 ALFTNYVPNPV 501
               +   +PV
Sbjct: 128 KALMDINESPV 138

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>CSN6_XENLA (Q6NUC2) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
          Length = 318

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
 Frame = +1

Query: 112 GEEMDVVKAAQLSGRTLE---KVVVHPLVLLSIVDHYXRVARDTRK--RVVGVLLGTSSR 276
           G E+DV     +  + +     V +HPLV+L+I DH+ R+     +  +V+G L+G    
Sbjct: 10  GMEVDVAALPSVMAQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 69

Query: 277 GVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKEND 456
             ++V NS+ +  + +D+   I   +  Y+ +    FK++      +GWY+TG     +D
Sbjct: 70  RNIEVMNSFELLSQINDEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSD 126

Query: 457 LDVHALFTNYVPNPV 501
           + VH      + +P+
Sbjct: 127 IHVHKQVCEIIESPL 141

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>CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (SGN6) (JAB1-containing signalosome subunit 6)
          Length = 324

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
 Frame = +1

Query: 112 GEEMDV-VKAAQLSGRTLE-KVVVHPLVLLSIVDHYXRVARDTRK--RVVGVLLGTSSRG 279
           G E+D  V +   SG T    V +HPLV+L+I DH+ R+     +  +V+G L+G     
Sbjct: 17  GMEVDAAVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGR 76

Query: 280 VVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDL 459
            ++V NS+ +     ++      +D  Y+ +    FK++      +GWY+TG     +D+
Sbjct: 77  NIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDI 133

Query: 460 DVHALFTNYVPNPV 501
            VH      + +P+
Sbjct: 134 HVHKQVCEIIESPL 147

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>CSN6_HUMAN (Q7L5N1) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (SGN6) (JAB1-containing signalosome subunit 6)
           (Vpr-interacting protein) (hVIP) (MOV34 homolog)
          Length = 327

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
 Frame = +1

Query: 112 GEEMD--VVKAAQLSGRTLE-KVVVHPLVLLSIVDHYXRVARDTRK--RVVGVLLGTSSR 276
           G E+D  VV +    G T    V +HPLV+L+I DH+ R+     +  +V+G L+G    
Sbjct: 19  GMEVDAAVVPSVMACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEG 78

Query: 277 GVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKEND 456
             ++V NS+ +     ++      +D  Y+ +    FK++      +GWY+TG     +D
Sbjct: 79  RNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 135

Query: 457 LDVHALFTNYVPNPV 501
           + VH      + +P+
Sbjct: 136 IHVHKQVCEIIESPL 150

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>IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h)
          Length = 337

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 31/112 (27%), Positives = 48/112 (42%)
 Frame = +1

Query: 160 LEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 339
           L  V +  L +L I+ H    +      V G LLG     V++VTN +  P  +DD++  
Sbjct: 22  LRVVQIEGLAVLKIIKHCKEFSPTL---VTGQLLGLDVGSVLEVTNCFPFPVRDDDEE-- 76

Query: 340 IWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPN 495
           I     NY   M    + +N   + VGWY +        +++   F NY  N
Sbjct: 77  IEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQEN 128

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>CSN6_DROME (Q9VCY3) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (Dch6)
          Length = 341

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
 Frame = +1

Query: 124 DVVKAAQLSGRTLEKVVVHPLVLLSIVDHYXR--VARDTRKRVVGVLLGTSSRGVVDVTN 297
           +++ AA  SG     + +HPLV+++I +H+ R        ++V G L+G      +++ N
Sbjct: 41  NIMAAAGTSGSVT--ISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMN 98

Query: 298 SYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPKLKENDLDV 465
           S+ +  +    +  I   + +Y+      +K++ +    +GWY+TG     +D+ +
Sbjct: 99  SFELKTDVIGDETVI---NKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKI 151

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>IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +1

Query: 160 LEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 336
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 337 RIWFLDHNYHESMFPMFKRINAXEHVVGWYST 432
              F +  Y   M    + +N     VGWY +
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122

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>IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +1

Query: 160 LEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 336
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 337 RIWFLDHNYHESMFPMFKRINAXEHVVGWYST 432
              F +  Y   M    + +N     VGWY +
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122

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>IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma)
          Length = 352

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +1

Query: 160 LEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 336
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 337 RIWFLDHNYHESMFPMFKRINAXEHVVGWYST 432
              F +  Y   M    + +N     VGWY +
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122

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>CSN6_CAEEL (Q95PZ0) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
          Length = 426

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
 Frame = +1

Query: 148 SGRTLEKVVVHPLVLLSIVDHYXRV---ARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFE 318
           SG    KV++HPLV++ + +HY R       T K+V G +LG  +   V+  NS+ +  E
Sbjct: 7   SGSCSSKVLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSFVLKME 66

Query: 319 -EDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTG--PKLKENDLDVHALFTNYV 489
            E+  +P  +  +H    +    +  +     V+G Y  G    L   +  + +  TN V
Sbjct: 67  TEEMAEPVTFSTEHLLQRA--DQYLEVFPELQVIGLYCAGEDDNLTPEEKPLLSKLTNAV 124

Query: 490 PN 495
            N
Sbjct: 125 RN 126

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>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 308

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 333
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 26  TSEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDEYTVRVVDVFAMP--QSGTG 80

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +DH +  +M  M K+    E VVGWY + P
Sbjct: 81  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 115

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>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (Dch5) (JAB1 homolog)
          Length = 327

 Score = 36.2 bits (82), Expect = 0.052
 Identities = 22/90 (24%), Positives = 38/90 (42%)
 Frame = +1

Query: 169 VVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 348
           + +  L LL +V H           V+G++LG      + V +++A+P E  +       
Sbjct: 52  IKISALALLKMVMH---ARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQA 108

Query: 349 LDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             + Y  +     K +   EH VGWY + P
Sbjct: 109 QAYEYMTAYMEAAKEVGRMEHAVGWYHSHP 138

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>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)|
          Length = 308

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
 Frame = +1

Query: 163 EKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKDPR 339
           E V +  L LL ++ H       T   V+G++LG       V V + +A+P  +      
Sbjct: 28  ECVYISSLALLKMLRHGRH---GTPMEVMGLMLGEFVDDFTVRVVDVFAMP--QSGTGVS 82

Query: 340 IWFLDHNYHESMFPMFKRINAXEHVVGWYSTGPK----LKENDLDVHALFTNYVPNPV 501
           +  +D  + ++M  M K+    E VVGWY + P     L   D++    F    P  V
Sbjct: 83  VEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAV 140

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>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 21/88 (23%), Positives = 38/88 (43%)
 Frame = +1

Query: 175 VHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 354
           V  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 57  VSALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 113

Query: 355 HNYHESMFPMFKRINAXEHVVGWYSTGP 438
           + Y  +     K++   E+ +GWY + P
Sbjct: 114 YEYMAAYIENAKQVGRLENAIGWYHSHP 141

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>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 332

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 21/88 (23%), Positives = 38/88 (43%)
 Frame = +1

Query: 175 VHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 354
           V  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 55  VSALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 111

Query: 355 HNYHESMFPMFKRINAXEHVVGWYSTGP 438
           + Y  +     K++   E+ +GWY + P
Sbjct: 112 YEYMAAYIENAKQVGRLENAIGWYHSHP 139

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>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III|
          Length = 319

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 333
           T E V +  L LL ++ H           V+G++LG       ++VT+ +A+P  +    
Sbjct: 25  TSETVNISSLALLKMLRH---ARSGIPLEVMGLMLGDFVDDYTINVTDVFAMP--QSGTS 79

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  Y      + K +   E+VVGWY + P
Sbjct: 80  VTVESVDPVYQTKHMDLLKLVGRTENVVGWYHSHP 114

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>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1) (Kip1 C-terminus-interacting
           protein 2)
          Length = 333

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +1

Query: 175 VHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 354
           +  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 56  ISALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 112

Query: 355 HNYHESMFPMFKRINAXEHVVGWYSTGP 438
           + Y  +     K++   E+ +GWY + P
Sbjct: 113 YEYMAAYIENAKQVGRLENAIGWYHSHP 140

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>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1)
          Length = 333

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +1

Query: 175 VHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 354
           +  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 56  ISALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 112

Query: 355 HNYHESMFPMFKRINAXEHVVGWYSTGP 438
           + Y  +     K++   E+ +GWY + P
Sbjct: 113 YEYMAAYIENAKQVGRLENAIGWYHSHP 140

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>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11|
          Length = 311

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 333
           T E V +  L LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 28  TKETVYISSLALLKMLKHSRA---GVPMEVMGLMLGDFVDEYTVNVVDVFAMP--QSGTG 82

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  +   M  M K+    + VVGWY + P
Sbjct: 83  VSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHP 117

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>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 20/85 (23%), Positives = 37/85 (43%)
 Frame = +1

Query: 184 LVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNY 363
           L LL +V H           V+G++LG      + + +S+A+P E  +         + Y
Sbjct: 58  LALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEY 114

Query: 364 HESMFPMFKRINAXEHVVGWYSTGP 438
             +     K++   E+ +GWY + P
Sbjct: 115 MAAYIENAKQVGRLENAIGWYHSHP 139

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>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S proteasome
           regulatory complex subunit p37B) (Yippee-interacting
           protein 5)
          Length = 308

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 333
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 25  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVQVIDVFAMP--QTGTG 79

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 80  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 114

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>EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 400 AXEHVVGWYSTGPKLKENDLDVHALFTNYV 489
           A  H+V W S+ PK +E D  VH    +Y+
Sbjct: 18  ADRHIVFWNSSNPKFREEDYTVHVQLNDYL 47

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>EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 400 AXEHVVGWYSTGPKLKENDLDVHALFTNYV 489
           A  H+V W S+ PK +E D  VH    +Y+
Sbjct: 18  ADRHIVFWNSSNPKFREEDYTVHVQLNDYL 47

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>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 312

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 333
           T E V +  L LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 29  TSETVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVNVIDVFAMP--QSGTG 83

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 84  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 118

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>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (MAD1)
          Length = 310

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 333
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 27  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTG 81

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 82  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 116

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>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S
           proteasome-associated PAD1 homolog 1)
          Length = 310

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 333
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 27  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTG 81

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 82  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 116

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>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11|
          Length = 306

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 333
           T E V +  + LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 23  TKETVYISSIALLKMLKHGRA---GVPMEVMGLMLGEFVDEYTVNVVDVFAMP--QSGTG 77

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  +   M  M K+    + VVGWY + P
Sbjct: 78  VSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHP 112

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>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 469

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +1

Query: 244 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGW 423
           V+G++ G   +  + V + Y +P E  +         + Y        K++   E++VGW
Sbjct: 85  VMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENLKQVGRDENIVGW 144

Query: 424 YSTGP 438
           Y + P
Sbjct: 145 YHSHP 149

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>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)|
          Length = 306

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 157 TLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 333
           T E V +  + LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 23  TKETVYISSIALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVNVVDVFAMP--QSGTG 77

Query: 334 PRIWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
             +  +D  +   M  M K+    + VVGWY + P
Sbjct: 78  VSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHP 112

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>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 336

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/65 (23%), Positives = 30/65 (46%)
 Frame = +1

Query: 244 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHVVGW 423
           V+G++ G      + +T++Y +P E  +         + Y      + +  N  E+V+GW
Sbjct: 66  VMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIGW 125

Query: 424 YSTGP 438
           Y + P
Sbjct: 126 YHSHP 130

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>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 332 SLSSSSNGTA*ELVTSTTPREEVPRSTPTT 243
           S SSSS+ T  +   STTP   VP +TP T
Sbjct: 213 SSSSSSSSTTPKTSASTTPESSVPATTPNT 242

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>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 299

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/90 (22%), Positives = 39/90 (43%)
 Frame = +1

Query: 169 VVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 348
           V +  + LL ++ H   V++     V+G + G      + + +S+A+P E  +       
Sbjct: 35  VKISAVALLKMLRH---VSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHE 91

Query: 349 LDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
               Y      + K +   E+V+GWY + P
Sbjct: 92  EAQEYSVQYHTLCKSVYRHENVIGWYHSHP 121

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>G3P_PSEAE (P27726) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH)
          Length = 334

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 142 QLSGRTLEKVVVHPLVLLSIVDHYXRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFE 318
           +L+G+     V  P++ +S+VD   +VARDT    V  LL  +S G  V   N+  +   
Sbjct: 224 ELAGKLTGLAVRVPVINVSLVDLTVQVARDTSVDEVNRLLREASEGSPVLGYNTQPLVSV 283

Query: 319 EDDKDPRIWFLDHNY 363
           + + DPR    D N+
Sbjct: 284 DFNHDPRSSIFDANH 298

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>CCA2_THEAC (Q9V302) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA|
           nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
           transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT)
           (Fragment)
          Length = 222

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 388 KRINAXEHVVGWYSTGPKLKENDLDVHALFTNYVPNPVL 504
           +R+ A   +VG Y+ G  L++ DLD+   F    P  ++
Sbjct: 39  RRLRAEAVIVGSYAKGTNLRDGDLDIFIAFDRDYPEEII 77

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>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)|
           (Signalosome subunit 5b) (Jun activation domain-binding
           homolog 1)
          Length = 357

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +1

Query: 163 EKVVVHPLVLLSIVDHYXRVARDTRK-RVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 339
           ++V +  L LL +V H    AR      ++G++ G +    + V +++A+P E  +    
Sbjct: 57  KRVHISALALLKMVVH----ARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVN 112

Query: 340 IWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
                + Y        K     E+VVGWY + P
Sbjct: 113 AQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHP 145

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>HPAB2_PSESM (Q8RSY1) Effector protein hopAB2 (Avirulence protein avrPtoB)|
           [Includes: E3 ubiquitin-protein ligase (EC 6.3.2.-)]
          Length = 553

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 335 GSLSSSSNGTA*ELVTSTTPREEVPRSTPTTRFRVSRAT 219
           GS +SSSN    +   S TP    P   PT R R+SR+T
Sbjct: 31  GSGASSSNSPQVQPRPSNTPPSNAPAPPPTGRERLSRST 69

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>EFNA1_HUMAN (P20827) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61) (Tumor necrosis factor, alpha-induced protein 4)
          Length = 205

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 400 AXEHVVGWYSTGPKLKENDLDVHALFTNYV 489
           A  H V W S+ PK +  D  +H    +YV
Sbjct: 18  ADRHTVFWNSSNPKFRNEDYTIHVQLNDYV 47

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>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)|
           (Signalosome subunit 5a) (Jun activation domain-binding
           homolog 2)
          Length = 358

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +1

Query: 163 EKVVVHPLVLLSIVDHYXRVARDTRK-RVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 339
           ++V +  L LL +V H    AR      ++G++ G +    + V +++A+P E  +    
Sbjct: 57  KRVKISALALLKMVVH----ARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVN 112

Query: 340 IWFLDHNYHESMFPMFKRINAXEHVVGWYSTGP 438
                + Y        K     E+VVGWY + P
Sbjct: 113 AQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHP 145

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>REXO4_MOUSE (Q6PAQ4) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease XPMC2)|
           (Prevents mitotic catastrophe 2 protein homolog)
          Length = 432

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 112 GEEMDVVK---AAQLSGRTLEKVVVHPLVLLSIVDHYXRVARDTRK 240
           GEE +VVK   A  L GR L    +H  + +  +DH  +  RDT+K
Sbjct: 314 GEEFEVVKKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQK 359

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>AAA_STAS1 (Q49UX4) N-acetylmuramoyl-L-alanine amidase aaa precursor (EC|
           3.5.1.28)
          Length = 327

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +1

Query: 235 RKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFPMFKRINAXEHV 414
           RK+++  ++GTS+   V  TN+ A    +      +W + + Y+ S+  +    N   +V
Sbjct: 2   RKKIIATVIGTSALAAVTWTNADAATTYKVKSGDSLWSIANKYNMSVAKLKSLNNLTSNV 61

Query: 415 V 417
           +
Sbjct: 62  I 62

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>C99A1_SORBI (O48957) Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment)|
          Length = 519

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 232 TRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 354
           T +  +G L G     VVDV   Y   F   D  P +WF+D
Sbjct: 189 TGRATLGKLCGDEIMSVVDVAVLYGSGFCAGDLFPSLWFVD 229


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,027,415
Number of Sequences: 219361
Number of extensions: 686021
Number of successful extensions: 2072
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2050
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result