Clone Name | bart09c01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C08, full insert sequence Length = 1325 Score = 547 bits (276), Expect = e-152 Identities = 361/390 (92%) Strand = Plus / Plus Query: 117 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 176 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 197 Query: 177 gcacccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccg 236 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 198 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 257 Query: 237 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 296 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 258 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 317 Query: 297 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 356 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 318 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 377 Query: 357 taattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggagcatgttgt 416 ||||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 378 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 437 Query: 417 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 476 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 438 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 497 Query: 477 taccaactatgttcctaatcctgtgctggt 506 | |||||||||||||| ||||| ||||| Sbjct: 498 caataactatgttcctaaccctgtcctggt 527
>dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F12, full insert sequence Length = 1431 Score = 547 bits (276), Expect = e-152 Identities = 361/390 (92%) Strand = Plus / Plus Query: 117 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 176 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 211 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 270 Query: 177 gcacccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccg 236 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 271 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 330 Query: 237 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 296 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 331 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 390 Query: 297 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 356 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 391 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 450 Query: 357 taattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggagcatgttgt 416 ||||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 451 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 510 Query: 417 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 476 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 511 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 570 Query: 477 taccaactatgttcctaatcctgtgctggt 506 | |||||||||||||| ||||| ||||| Sbjct: 571 caataactatgttcctaaccctgtcctggt 600
>dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D07, full insert sequence Length = 1373 Score = 547 bits (276), Expect = e-152 Identities = 361/390 (92%) Strand = Plus / Plus Query: 117 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 176 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 152 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 211 Query: 177 gcacccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccg 236 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 212 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 271 Query: 237 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 296 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 272 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 331 Query: 297 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 356 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 332 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 391 Query: 357 taattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggagcatgttgt 416 ||||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 392 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 451 Query: 417 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 476 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 452 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 511 Query: 477 taccaactatgttcctaatcctgtgctggt 506 | |||||||||||||| ||||| ||||| Sbjct: 512 caataactatgttcctaaccctgtcctggt 541
>ref|XM_474221.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 531 bits (268), Expect = e-148 Identities = 323/342 (94%) Strand = Plus / Plus Query: 121 atggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggtgcac 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 atggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggtgcac 60 Query: 181 ccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccggaag 240 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 61 ccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgcaag 120 Query: 241 cgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaactcc 300 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 121 cgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaactcc 180 Query: 301 tacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataat 360 ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 181 tacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataat 240 Query: 361 taccatgagtctatgttccccatgttcaagaggatcaacgccnaggagcatgttgttggc 420 ||||| || || ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 241 taccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgttggc 300 Query: 421 tggtacagcactggtccaaaactaaaggagaacgacttggat 462 ||||||||||| ||||||||||| | |||||||||||||||| Sbjct: 301 tggtacagcaccggtccaaaactcagggagaacgacttggat 342
>dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mRNA for 26S proteasome regulatory particle non-ATPase subunit8, complete cds Length = 1308 Score = 531 bits (268), Expect = e-148 Identities = 359/390 (92%) Strand = Plus / Plus Query: 117 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 176 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 123 ggagatggacgtggtgaaggcggcgcacgtctcggggcggacgctggagaaggtggtggt 182 Query: 177 gcacccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccg 236 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 183 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 242 Query: 237 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 296 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 243 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 302 Query: 297 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 356 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 303 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 362 Query: 357 taattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggagcatgttgt 416 ||||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 363 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 422 Query: 417 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 476 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 423 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 482 Query: 477 taccaactatgttcctaatcctgtgctggt 506 | |||||||||||||| ||||| ||||| Sbjct: 483 caataactatgttcctaaccctgtcctggt 512
>gb|AY109022.1| Zea mays PCO082032 mRNA sequence Length = 1409 Score = 488 bits (246), Expect = e-135 Identities = 346/380 (91%) Strand = Plus / Plus Query: 118 gagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggtg 177 ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct: 131 gagatggacgtggtgaaggcggcgcagttgtcggggcggacgctggaacgggtagtggtg 190 Query: 178 cacccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccgg 237 || || ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 191 catcccttggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgc 250 Query: 238 aagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaac 297 ||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||| Sbjct: 251 aagcgcgtcgtcggcgtcctcctcggcacctcatcccgcgggtccgtcgatgtcaccaac 310 Query: 298 tcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccat 357 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 311 tcctacgccgtgccgtttgaggaggatgacaaggatcctaggatctggttccttgaccac 370 Query: 358 aattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggagcatgttgtt 417 |||||||| ||||| |||||| |||||||||||||||| || ||| |||||||||||||| Sbjct: 371 aattaccacgagtcaatgttctccatgttcaagaggattaatgccaaggagcatgttgtt 430 Query: 418 ggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgttt 477 ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| || Sbjct: 431 ggctggtacagcactggcccaaaactaagggagaacgacttggatgtccatgcattattc 490 Query: 478 accaactatgttcctaatcc 497 | || |||||||||||||| Sbjct: 491 aacagttatgttcctaatcc 510
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 325 bits (164), Expect = 8e-86 Identities = 184/191 (96%) Strand = Plus / Plus Query: 117 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 176 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 23366 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 23425 Query: 177 gcacccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccg 236 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 23426 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 23485 Query: 237 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 296 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 23486 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 23545 Query: 297 ctcctacgccg 307 ||||||||||| Sbjct: 23546 ctcctacgccg 23556 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 307 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 366 ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 23786 gtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataattaccac 23845 Query: 367 gagtctatgttccccatgttcaagaggatcaacg 400 || || ||||| ||||||||||||||||||||| Sbjct: 23846 gaatcgatgttttccatgttcaagaggatcaacg 23879 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 400 gccnaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 459 ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 23962 gccaaggagcatgttgttggctggtacagcaccggtccaaaactcagggagaacgacttg 24021 Query: 460 gat 462 ||| Sbjct: 24022 gat 24024
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 325 bits (164), Expect = 8e-86 Identities = 184/191 (96%) Strand = Plus / Plus Query: 117 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 176 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33811467 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 33811526 Query: 177 gcacccgctggtgctgctcagcatcgtcgaccactacnaccgcgtcgcccgcgacacccg 236 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 33811527 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 33811586 Query: 237 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 296 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 33811587 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 33811646 Query: 297 ctcctacgccg 307 ||||||||||| Sbjct: 33811647 ctcctacgccg 33811657 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 307 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 366 ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 33811887 gtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataattaccac 33811946 Query: 367 gagtctatgttccccatgttcaagaggatcaacg 400 || || ||||| ||||||||||||||||||||| Sbjct: 33811947 gaatcgatgttttccatgttcaagaggatcaacg 33811980 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 400 gccnaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 459 ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 33812063 gccaaggagcatgttgttggctggtacagcaccggtccaaaactcagggagaacgacttg 33812122 Query: 460 gat 462 ||| Sbjct: 33812123 gat 33812125
>ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV34) mRNA, complete cds Length = 1372 Score = 121 bits (61), Expect = 2e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 298 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 357 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || || || || ||||||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 358 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 417 Query: 409 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 468 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 418 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 477 Query: 469 gcattgtt 476 || ||||| Sbjct: 478 gcgttgtt 485
>gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA, RPN8a-2 allele, complete cds Length = 932 Score = 121 bits (61), Expect = 2e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 169 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 228 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || || || || ||||||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 229 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 288 Query: 409 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 468 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 289 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 348 Query: 469 gcattgtt 476 || ||||| Sbjct: 349 gcgttgtt 356
>gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mRNA, complete cds Length = 1367 Score = 121 bits (61), Expect = 2e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 297 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 356 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || || || || ||||||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 357 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 416 Query: 409 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 468 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 417 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 476 Query: 469 gcattgtt 476 || ||||| Sbjct: 477 gcgttgtt 484
>emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1302 Score = 121 bits (61), Expect = 2e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 277 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 336 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || || || || ||||||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 337 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 396 Query: 409 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 468 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 397 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 456 Query: 469 gcattgtt 476 || ||||| Sbjct: 457 gcgttgtt 464
>emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 121 bits (61), Expect = 2e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 274 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 333 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || || || || ||||||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 334 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 393 Query: 409 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 468 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 394 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 453 Query: 469 gcattgtt 476 || ||||| Sbjct: 454 gcgttgtt 461
>gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, complete cds Length = 927 Score = 121 bits (61), Expect = 2e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 169 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 228 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || || || || ||||||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 229 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 288 Query: 409 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 468 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 289 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 348 Query: 469 gcattgtt 476 || ||||| Sbjct: 349 gcgttgtt 356
>gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA, RPN8a-1 allele, complete cds Length = 1314 Score = 119 bits (60), Expect = 9e-24 Identities = 122/143 (85%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 229 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 288 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || ||||| || || |||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 289 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 348 Query: 409 catgttgttggctggtacagcac 431 |||||||| || ||||||||||| Sbjct: 349 catgttgtaggttggtacagcac 371
>gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete sequence Length = 1368 Score = 119 bits (60), Expect = 9e-24 Identities = 122/143 (85%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 298 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 357 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || ||||| || || |||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 358 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 417 Query: 409 catgttgttggctggtacagcac 431 |||||||| || ||||||||||| Sbjct: 418 catgttgtaggttggtacagcac 440
>gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasome subunit athMOV34 mRNA, complete cds Length = 1357 Score = 119 bits (60), Expect = 9e-24 Identities = 122/143 (85%) Strand = Plus / Plus Query: 289 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 348 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 260 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 319 Query: 349 ctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnaggag 408 || ||||| || || |||||||| ||||||| |||||||||||| || || ||| ||||| Sbjct: 320 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 379 Query: 409 catgttgttggctggtacagcac 431 |||||||| || ||||||||||| Sbjct: 380 catgttgtaggttggtacagcac 402
>ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 mRNA, complete cds Length = 1417 Score = 93.7 bits (47), Expect = 5e-16 Identities = 130/158 (82%) Strand = Plus / Plus Query: 286 gacgtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctgg 345 |||||||||||| |||||| ||||| ||||||||||||||||| ||| | || || ||| Sbjct: 265 gacgtcaccaacagctacgcagtgccttttgaggaggatgacaaagacacaagcatatgg 324 Query: 346 ttcctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnag 405 || || || || || ||||| ||||| ||||| | |||||||||||| || || || || Sbjct: 325 tttcttgatcacaactaccacgagtcgatgtttcacatgttcaagagaattaatgctaag 384 Query: 406 gagcatgttgttggctggtacagcactggtccaaaact 443 |||||| |||| || ||||||||||| ||||| ||||| Sbjct: 385 gagcatattgtgggttggtacagcacaggtcctaaact 422
>gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b (RPN8b) mRNA, partial cds Length = 930 Score = 93.7 bits (47), Expect = 5e-16 Identities = 130/158 (82%) Strand = Plus / Plus Query: 286 gacgtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctgg 345 |||||||||||| |||||| ||||| ||||||||||||||||| ||| | || || ||| Sbjct: 166 gacgtcaccaacagctacgcagtgccttttgaggaggatgacaaagacacaagcatatgg 225 Query: 346 ttcctcgaccataattaccatgagtctatgttccccatgttcaagaggatcaacgccnag 405 || || || || || ||||| ||||| ||||| | |||||||||||| || || || || Sbjct: 226 tttcttgatcacaactaccacgagtcgatgtttcacatgttcaagagaattaatgctaag 285 Query: 406 gagcatgttgttggctggtacagcactggtccaaaact 443 |||||| |||| || ||||||||||| ||||| ||||| Sbjct: 286 gagcatattgtgggttggtacagcacaggtcctaaact 323
>gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA Length = 1191 Score = 91.7 bits (46), Expect = 2e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 307 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 366 ||||| ||||||||||| |||| |||||| || || ||||| || |||||||| || ||| Sbjct: 187 gtgccctttgaggaggaggacagggaccctagtatttggtttcttgaccataactatcat 246 Query: 367 gagtctatgttccccatgttcaagaggatcaacgccnaggagcatgttgttggctggtac 426 || || ||||| |||||||| ||||| ||||| |||||||||||||||| ||||| Sbjct: 247 gaatcaatgttttccatgttccgtaggataaacgcaaaggagcatgttgttggttggtat 306 Query: 427 agcactggtccaaaact 443 ||||||||||| ||||| Sbjct: 307 agcactggtcccaaact 323
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3 Length = 87835 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 307 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 366 ||||| ||||||||||||||||| ||||| || |||||||| || || || || |||||| Sbjct: 57169 gtgccctttgaggaggatgacaaagacccaagcatctggtttcttgatcacaactaccat 57228 Query: 367 gagtctatgttccccatgttcaagag 392 ||||| ||||||| |||||||||||| Sbjct: 57229 gagtcaatgttccacatgttcaagag 57254 Score = 44.1 bits (22), Expect = 0.44 Identities = 63/77 (81%) Strand = Plus / Plus Query: 400 gccnaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 459 ||| ||||||||||||| || ||||||||||| || || ||||| ||||| || ||| Sbjct: 57345 gccaaggagcatgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttg 57404 Query: 460 gatgttcatgcattgtt 476 |||||||| || ||||| Sbjct: 57405 gatgttcacgcgttgtt 57421
>emb|AJ719835.1| Gallus gallus partial mRNA for hypothetical protein, clone 7b3 Length = 1038 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 169 gtggtggtgcacccgctggtgctgctcagcatcgtcgaccact 211 |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 96 gtggtggtgcacccgctggtgctgctcagcgtcgtcgatcact 138
>gb|DQ216029.1| Taeniopygia guttata clone 0064P0001A12 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1062 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 168 ggtggtggtgcacccgctggtgctgctcagcatcgt 203 ||||||||||||||||||||||||||||||| |||| Sbjct: 58 ggtggtggtgcacccgctggtgctgctcagcgtcgt 93
>gb|DQ216028.1| Taeniopygia guttata clone 0058P0011D07 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1121 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 168 ggtggtggtgcacccgctggtgctgctcagcatcgt 203 ||||||||||||||||||||||||||||||| |||| Sbjct: 117 ggtggtggtgcacccgctggtgctgctcagcgtcgt 152
>gb|DQ216027.1| Taeniopygia guttata clone 0063P0033E11 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1068 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 168 ggtggtggtgcacccgctggtgctgctcagcatcgt 203 ||||||||||||||||||||||||||||||| |||| Sbjct: 65 ggtggtggtgcacccgctggtgctgctcagcgtcgt 100
>gb|DQ216026.1| Taeniopygia guttata clone 0061P0027A07 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1090 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 168 ggtggtggtgcacccgctggtgctgctcagcatcgt 203 ||||||||||||||||||||||||||||||| |||| Sbjct: 73 ggtggtggtgcacccgctggtgctgctcagcgtcgt 108
>gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete sequence Length = 28951 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 aggagcatgttgttggctggtacagcactggtccaaaact 443 |||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 24807 aggagcatgttgttggttggtatagcactggtcccaaact 24846 Score = 42.1 bits (21), Expect = 1.7 Identities = 66/81 (81%) Strand = Plus / Plus Query: 307 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 366 ||||| ||||||||||| || | |||||| | |||||||| || |||||||| || ||| Sbjct: 24615 gtgccctttgaggaggaggagagggaccctggtatctggtttcttgaccataactatcat 24674 Query: 367 gagtctatgttccccatgttc 387 || || ||||| |||||||| Sbjct: 24675 gaatcgatgttttccatgttc 24695
>ref|XM_511103.1| PREDICTED: Pan troglodytes similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog) (LOC454240), mRNA Length = 1890 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 380 agaaggtggtggtccaccccctggtgctgctcag 413
>ref|NM_002811.3| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) (PSMD7), mRNA Length = 1678 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 152 agaaggtggtggtccaccccctggtgctgctcag 185
>gb|BC012606.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone MGC:13607 IMAGE:4334058), complete cds Length = 1175 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 141 agaaggtggtggtccaccccctggtgctgctcag 174
>gb|BC013513.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, mRNA (cDNA clone IMAGE:4235236), with apparent retained intron Length = 1036 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 132 agaaggtggtggttcaccccctggtgctgctcag 165
>gb|AY126304.1| Mus musculus isolate 0126.HH59 M-MuLV retroviral integration site Length = 453 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 172 agaaggtggtggttcaccccctggtgctgctcag 139
>gb|BC000338.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone IMAGE:2822691), partial cds Length = 1107 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 147 agaaggtggtggtccaccccctggtgctgctcag 180
>gb|BC103437.1| Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone MGC:128537 IMAGE:7985023), complete cds Length = 1135 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 128 agaaggtggtggtccaccccctggtgctgctcag 161
>emb|CR620737.1| full-length cDNA clone CS0DF037YG19 of Fetal brain of Homo sapiens (human) Length = 1568 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 104 agaaggtggtggtccaccccctggtgctgctcag 137
>emb|CR616820.1| full-length cDNA clone CS0DG002YN14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1599 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 93 agaaggtggtggtccaccccctggtgctgctcag 126
>emb|CR601507.1| full-length cDNA clone CS0DI083YB17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 994 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 80 agaaggtggtggtccaccccctggtgctgctcag 113
>emb|CR600117.1| full-length cDNA clone CS0DH004YP16 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1588 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 88 agaaggtggtggtccaccccctggtgctgctcag 121
>emb|CR599542.1| full-length cDNA clone CS0DA004YM20 of Neuroblastoma of Homo sapiens (human) Length = 1597 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 102 agaaggtggtggtccaccccctggtgctgctcag 135
>emb|CR597005.1| full-length cDNA clone CS0DA004YG14 of Neuroblastoma of Homo sapiens (human) Length = 1585 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 91 agaaggtggtggtccaccccctggtgctgctcag 124
>emb|CR595724.1| full-length cDNA clone CS0DJ012YF02 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1584 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 91 agaaggtggtggtccaccccctggtgctgctcag 124
>dbj|AK146128.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730007F24 product:Warning: possibly chimeric clone, full insert sequence Length = 2324 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 98 agaaggtggtggttcaccccctggtgctgctcag 131
>dbj|AK159825.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420032C16 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 1090 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 102 agaaggtggtggttcaccccctggtgctgctcag 135
>dbj|AK158379.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930111J18 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 861 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 127 agaaggtggtggttcaccccctggtgctgctcag 160
>dbj|AK012463.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700060P05 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 850 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 115 agaaggtggtggttcaccccctggtgctgctcag 148
>dbj|AK031013.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830490F08 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 1017 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 101 agaaggtggtggttcaccccctggtgctgctcag 134
>gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484E3, complete sequence Length = 195342 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 166162 agaaggtggtggtccaccccctggtgctgctcag 166195
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 307 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 366 ||||| ||||||||||||||||| ||| | || || ||||| || || || || ||||| Sbjct: 66731 gtgccttttgaggaggatgacaaagacacaagcatatggtttcttgatcacaactaccac 66790 Query: 367 gagtctatgttccccatgttcaagag 392 ||||| ||||| | |||||||||||| Sbjct: 66791 gagtcgatgtttcacatgttcaagag 66816 Score = 40.1 bits (20), Expect = 6.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 404 aggagcatgttgttggctggtacagcactggtccaaaact 443 |||||||| |||| || ||||||||||| ||||| ||||| Sbjct: 66908 aggagcatattgtgggttggtacagcacaggtcctaaact 66947
>ref|XM_320392.2| Anopheles gambiae str. PEST ENSANGP00000013949 (ENSANGG00000011460), partial mRNA Length = 977 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 166 aaggtggtggtgcacccgctggtgctgctcagcatcgtcgaccact 211 |||||| | |||||||||||||||||||||||| | || ||||||| Sbjct: 150 aaggtgatcgtgcacccgctggtgctgctcagcgtggtggaccact 195
>dbj|D50063.1|HUMP40MOV Homo sapiens mRNA for proteasome subunit p40 / Mov34 protein, complete cds Length = 1602 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 103 agaaggtggtggtccaccccctggtgctgctcag 136
>gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, complete sequence Length = 142427 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 79152 agaaggtggtggttcaccccctggtgctgctcag 79185
>ref|NM_010817.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Psmd7), mRNA Length = 1599 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 150 agaaggtggtggttcaccccctggtgctgctcag 183
>ref|NM_001034423.1| Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) (PSMD7), mRNA Length = 1135 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 128 agaaggtggtggtccaccccctggtgctgctcag 161
>gb|M64634.1|MUSMOV341 Mouse Mov-34 36 kD protein gene, exon 1 Length = 852 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 441 agaaggtggtggttcaccccctggtgctgctcag 474
>gb|M64641.1|MUSMOV34 Mouse Mov-34 protein mRNA, complete cds Length = 1547 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 ||||||||||||| ||||| |||||||||||||| Sbjct: 98 agaaggtggtggttcaccccctggtgctgctcag 131
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148, complete sequence Length = 106000 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 163 gagaaggtggtggtgcacccgctggtgct 191 |||||||||||||| |||||||||||||| Sbjct: 66609 gagaaggtggtggttcacccgctggtgct 66581
>gb|AY609436.1| Sus scrofa clone Clu_11484.scr.msk.p1.Contig1, mRNA sequence Length = 1608 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgct 194 ||||||||||||| ||||| ||||||||||| Sbjct: 105 agaaggtggtggtccaccccctggtgctgct 135
>ref|NM_196387.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0044A10.3), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 ggaggagaggggaggagatgga 125 |||||||||||||||||||||| Sbjct: 87 ggaggagaggggaggagatgga 66
>ref|XM_468697.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 1206 gtcgtcggcgtcctcctcggctcctcctcc 1177
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 65894 gtcgtcggcgtcctcctcggctcctcctcc 65865
>ref|XM_458621.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D04235g) partial mRNA Length = 963 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 457 ttggatgttcatgcattgtttaccaa 482 ||||| |||||||||||||||||||| Sbjct: 801 ttggaggttcatgcattgtttaccaa 826
>gb|DQ196343.1| Homo sapiens prostate cancer antigen-1 (DEPC1) gene, complete cds Length = 43337 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 gctggagaaggtggtggtgcac 180 |||||||||||||||||||||| Sbjct: 20626 gctggagaaggtggtggtgcac 20605
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 17099496 gtcgtcggcgtcctcctcggctcctcctcc 17099467
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 130242 gtcgtcggcgtcctcctcggctcctcctcc 130213
>ref|XM_381155.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG00979.1) partial mRNA Length = 1479 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 146 tgtcggggcggacgctggagaaggtggtgg 175 |||||||||||||| |||||||| |||||| Sbjct: 1165 tgtcggggcggacgttggagaagatggtgg 1136
>ref|XM_858060.1| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein), transcript variant 2 (LOC479671), mRNA Length = 525 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 |||||||||| || ||||| |||||||||||||| Sbjct: 67 agaaggtggtcgttcaccccctggtgctgctcag 100
>ref|XM_536802.2| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein), transcript variant 1 (LOC479671), mRNA Length = 1547 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 |||||||||| || ||||| |||||||||||||| Sbjct: 91 agaaggtggtcgttcaccccctggtgctgctcag 124
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 457 ttggatgttcatgcattgtttaccaa 482 ||||| |||||||||||||||||||| Sbjct: 302320 ttggaggttcatgcattgtttaccaa 302295
>gb|AC087521.10| Homo sapiens chromosome 11, clone RP11-613D13, complete sequence Length = 188967 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 gctggagaaggtggtggtgcac 180 |||||||||||||||||||||| Sbjct: 64198 gctggagaaggtggtggtgcac 64219
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0044A10, from chromosome 10, complete sequence Length = 169270 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 ggaggagaggggaggagatgga 125 |||||||||||||||||||||| Sbjct: 4590 ggaggagaggggaggagatgga 4569
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 ggaggagaggggaggagatgga 125 |||||||||||||||||||||| Sbjct: 13049071 ggaggagaggggaggagatgga 13049050
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 17093065 gtcgtcggcgtcctcctcggctcctcctcc 17093036
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 37294022 gtcgtcggcgtcctcctcggctcctcctcc 37293993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatgg 124 ||||||||||||||||||||| Sbjct: 22238451 ggaggagaggggaggagatgg 22238471
>ref|XM_226439.3| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (predicted) (Psmd7_predicted), mRNA Length = 1668 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Plus Query: 164 agaaggtggtggtgcacccgctggtgctgctcag 197 |||| |||||||| ||||| |||||||||||||| Sbjct: 230 agaaagtggtggtccaccccctggtgctgctcag 263
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 6056 gtcgtcggcgtcctcctcggctcctcctcc 6027
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 131011 gtcgtcggcgtcctcctcggctcctcctcc 130982
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 ggaggagaggggaggagatgga 125 |||||||||||||||||||||| Sbjct: 13056411 ggaggagaggggaggagatgga 13056390
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gtcgtcggcgtgctcctcggcacctcctcc 273 ||||||||||| ||||||||| |||||||| Sbjct: 1931959 gtcgtcggcgtcctcctcggctcctcctcc 1931930 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 17370244 gaggagaggggaggagatgg 17370263
>gb|AC132249.3| Mus musculus BAC clone RP24-434O21 from chromosome 6, complete sequence Length = 180332 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatgg 124 ||||||||||||||||||||| Sbjct: 166233 ggaggagaggggaggagatgg 166253
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 ggagaaggtggtggtgcacccgctg 186 ||||||||||||||||||| ||||| Sbjct: 81958 ggagaaggtggtggtgcacgcgctg 81934
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 ggagaaggtggtggtgcacccgctg 186 ||||||||||||||||||| ||||| Sbjct: 37788 ggagaaggtggtggtgcacgcgctg 37812
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatgg 124 ||||||||||||||||||||| Sbjct: 20403 ggaggagaggggaggagatgg 20423
>gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, complete sequence Length = 139560 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 ggaggagaggggaggagatgg 124 ||||||||||||||||||||| Sbjct: 30172 ggaggagaggggaggagatgg 30152
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatgg 124 ||||||||||||||||||||| Sbjct: 20930 ggaggagaggggaggagatgg 20950
>gb|AC154024.2| Mus musculus 6 BAC RP24-137K15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173257 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatgg 124 ||||||||||||||||||||| Sbjct: 32722 ggaggagaggggaggagatgg 32742
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 gtggtgaaggcggcgcagctgtcgg 151 ||||||| ||||||||||||||||| Sbjct: 172371 gtggtgacggcggcgcagctgtcgg 172347
>emb|AL806521.9| Mouse DNA sequence from clone RP23-385N7 on chromosome 4, complete sequence Length = 187066 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 cgccggaggagaggggaggag 120 ||||||||||||||||||||| Sbjct: 159337 cgccggaggagaggggaggag 159317
>gb|AC134792.9| Mus musculus chromosome 3, clone RP24-458L6, complete sequence Length = 166417 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 ctatgttccccatgttcaag 390 |||||||||||||||||||| Sbjct: 11296 ctatgttccccatgttcaag 11315
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 5316 gaggagaggggaggagatgg 5335
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 31298 gaggagaggggaggagatgg 31317
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cgtcgcccgcgacacccgga 238 |||||||||||||||||||| Sbjct: 2482322 cgtcgcccgcgacacccgga 2482303
>gb|AC141927.3| Mus musculus BAC clone RP23-237F16 from chromosome 6, complete sequence Length = 186452 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccggaggagaggggaggagatgg 124 |||||||||||||||||| ||||| Sbjct: 57269 gccggaggagaggggaggtgatgg 57292
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gctgtcggggcggacgctgg 163 |||||||||||||||||||| Sbjct: 924626 gctgtcggggcggacgctgg 924607 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gctgtcggggcggacgctgg 163 |||||||||||||||||||| Sbjct: 897841 gctgtcggggcggacgctgg 897822
>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence Length = 221436 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 70996 gaggagaggggaggagatgg 71015
>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene, partial cds Length = 2020 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 gcggcgcagctgtcggggcggacg 159 |||||||||||| ||||||||||| Sbjct: 1800 gcggcgcagctgccggggcggacg 1823
>ref|XM_390914.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10738.1) partial mRNA Length = 1035 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gaggaggatgacaaggaccc 335 |||||||||||||||||||| Sbjct: 196 gaggaggatgacaaggaccc 215
>gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosome 15, complete sequence Length = 193321 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 59692 gaggagaggggaggagatgg 59673
>emb|AJ621049.1| Bos taurus partial mRNA for L-type voltage-gated calcium channel alpha 1S subunit (caV1.1 gene) Length = 489 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 acccgaggatctggttcctc 351 |||||||||||||||||||| Sbjct: 130 acccgaggatctggttcctc 111
>ref|XM_503049.1| Yarrowia lipolytica CLIB122, YALI0D19910g predicted mRNA Length = 1014 Score = 40.1 bits (20), Expect = 6.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 381 catgttcaagaggatcaacgccnagga 407 ||||||||||| |||||||||| |||| Sbjct: 294 catgttcaagaagatcaacgccaagga 320
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cgtcgcccgcgacacccgga 238 |||||||||||||||||||| Sbjct: 60206 cgtcgcccgcgacacccgga 60187
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gctgtcggggcggacgctgg 163 |||||||||||||||||||| Sbjct: 2243349 gctgtcggggcggacgctgg 2243330 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gctgtcggggcggacgctgg 163 |||||||||||||||||||| Sbjct: 2216498 gctgtcggggcggacgctgg 2216479
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cgtcgcccgcgacacccgga 238 |||||||||||||||||||| Sbjct: 259192 cgtcgcccgcgacacccgga 259173
>gb|AE006017.1| Caulobacter crescentus CB15 section 343 of 359 of the complete genome Length = 10135 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 agcgcgtcgtcggcgtgctcctcg 262 ||||||||||||||||| |||||| Sbjct: 3724 agcgcgtcgtcggcgtgatcctcg 3701
>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence Length = 206320 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatg 123 |||||||||||||||||||| Sbjct: 202786 ggaggagaggggaggagatg 202805
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gctgtcggggcggacgctgg 163 |||||||||||||||||||| Sbjct: 1789922 gctgtcggggcggacgctgg 1789903
>gb|AC148659.1| Macaca mulatta Major Histocompatibility Complex BAC MMU005H07, complete sequence Length = 174766 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 gctcctcggcacctcctcccgcgg 278 ||||||||||||| |||||||||| Sbjct: 144645 gctcctcggcaccccctcccgcgg 144622
>gb|AC161938.2| Mus musculus 6 BAC RP24-162E3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163330 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gccggaggagaggggaggagatgg 124 |||||||||||||||||| ||||| Sbjct: 59502 gccggaggagaggggaggtgatgg 59479
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 cctcctcccgcggcgtcgtcgacg 289 |||||||||||||||||| ||||| Sbjct: 10256429 cctcctcccgcggcgtcgacgacg 10256406
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 17276598 gaggagaggggaggagatgg 17276617
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 6043639 gaggagaggggaggagatgg 6043620
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gagaggggaggagatggacg 127 |||||||||||||||||||| Sbjct: 868713 gagaggggaggagatggacg 868732
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatg 123 |||||||||||||||||||| Sbjct: 19597036 ggaggagaggggaggagatg 19597055
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gctcctcggcacctcctcccgcgg 278 ||||||||||||| |||||||||| Sbjct: 1740961 gctcctcggcaccccctcccgcgg 1740984
>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence Length = 203200 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 166859 gaggagaggggaggagatgg 166840
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gctggagaaggtggtggtgc 178 |||||||||||||||||||| Sbjct: 1169319 gctggagaaggtggtggtgc 1169338
>gb|AC132808.2| Homo sapiens chromosome 3 clone RP11-794P9, complete sequence Length = 195741 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggaggagaggggaggagatg 123 |||||||||||||||||||| Sbjct: 123254 ggaggagaggggaggagatg 123235
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gagaggggaggagatggacg 127 |||||||||||||||||||| Sbjct: 151847 gagaggggaggagatggacg 151866
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aaggcggcgcagctgtcggg 152 |||||||||||||||||||| Sbjct: 4547184 aaggcggcgcagctgtcggg 4547165
>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) Length = 11618 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gagaggggaggagatggacg 127 |||||||||||||||||||| Sbjct: 788 gagaggggaggagatggacg 807
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gagaggggaggagatggacg 127 |||||||||||||||||||| Sbjct: 49608 gagaggggaggagatggacg 49627
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 94451 gaggagaggggaggagatgg 94432
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ggaggagaggggaggagatg 123 |||||||||||||||||||| Sbjct: 63322 ggaggagaggggaggagatg 63341
>dbj|AK099846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109F13, full insert sequence Length = 2864 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 cctcctcccgcggcgtcgtcgacg 289 |||||||||||||||||| ||||| Sbjct: 35 cctcctcccgcggcgtcgacgacg 58
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 acccgctggtgctgctcagcatcgtcga 206 ||||||||||||||||| |||| ||||| Sbjct: 5741651 acccgctggtgctgctcggcatagtcga 5741678
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gctggtgctgctcagcatcg 202 |||||||||||||||||||| Sbjct: 76895 gctggtgctgctcagcatcg 76914
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 cctcctcccgcggcgtcgtcgacg 289 |||||||||||||||||| ||||| Sbjct: 10256311 cctcctcccgcggcgtcgacgacg 10256288
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 cctcctcccgcggcgtcgtcgacg 289 |||||||||||||||||| ||||| Sbjct: 19348 cctcctcccgcggcgtcgacgacg 19325
>gb|AC147224.5| Mus musculus BAC clone RP23-101E7 from 15, complete sequence Length = 201924 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggagaggggaggagatgg 124 |||||||||||||||||||| Sbjct: 58683 gaggagaggggaggagatgg 58702
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 381 catgttcaagaggatcaacgccnagga 407 ||||||||||| |||||||||| |||| Sbjct: 2516688 catgttcaagaagatcaacgccaagga 2516714
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgtcggcgtgctcctcggca 265 |||||||||||||||||||| Sbjct: 659840 cgtcggcgtgctcctcggca 659821
>emb|X76753.2|HSSTGEX1 Homo sapiens HG 5-HTT gene for serotonin transporter, exon 1 Length = 3695 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ggagaggggaggagatggac 126 |||||||||||||||||||| Sbjct: 979 ggagaggggaggagatggac 998 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,254,058 Number of Sequences: 3902068 Number of extensions: 3254058 Number of successful extensions: 82550 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80663 Number of HSP's gapped (non-prelim): 1883 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)