Clone Name | bart09b12 |
---|---|
Clone Library Name | barley_pub |
>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)| (GID1-like protein 3) Length = 344 Score = 37.0 bits (84), Expect = 0.024 Identities = 21/67 (31%), Positives = 34/67 (50%) Frame = +2 Query: 155 LPLGVRLQLAGLTAAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDA 334 +PL + ++ A + + R DGT NR L +DR + ANP +GV S+D +D Sbjct: 16 VPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANP---VNGVFSFDVIIDR 72 Query: 335 SRGIWAR 355 + +R Sbjct: 73 QTNLLSR 79
>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)| (GID1-like protein 1) Length = 345 Score = 36.6 bits (83), Expect = 0.031 Identities = 21/67 (31%), Positives = 34/67 (50%) Frame = +2 Query: 155 LPLGVRLQLAGLTAAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDA 334 +PL + ++ A + + R DGT NR L +DR ++ ANP GV S+D +D Sbjct: 16 VPLNTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANP---VDGVFSFDVLIDR 72 Query: 335 SRGIWAR 355 + +R Sbjct: 73 RINLLSR 79
>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)| (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) Length = 354 Score = 33.9 bits (76), Expect = 0.20 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = +2 Query: 155 LPLGVRLQLAGLTAAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDA 334 +PL + ++ + + + R+DGT R L +DR + A P GV S+D +D Sbjct: 16 VPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPL---EGVSSFDHIIDQ 72 Query: 335 SRGIWAR 355 S G+ R Sbjct: 73 SVGLEVR 79
>SODC_MYCPA (Q9AGW2) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 227 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 222 SLRSTASMAAVSPASWSRTPSGSGAGIGRCP*PAAASI 109 S + +S+ +PA W+ +PS SGAG AA SI Sbjct: 22 SPQHASSLPGTTPAVWTGSPSPSGAGAAEAAPAAAPSI 59
>UNG_PRVIF (P52506) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 315 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = -2 Query: 237 RLTVPSLRSTASMAAVSPASWSRTPSGSGAGIGRCP*PAAAS 112 RL VP+ ++AS AA + A + P+G+GAG + P AA+ Sbjct: 18 RLVVPAAAASASNAATAAA--AAAPAGAGAGASKPARPPAAA 57
>ECX1_METTH (O26779) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 240 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 194 AAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDASR 340 A I ++R D V RC Y++ + +R P PD V T +A R Sbjct: 62 AQIRKLQRPDRAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALR 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,858,834 Number of Sequences: 219361 Number of extensions: 522088 Number of successful extensions: 1876 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1833 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1872 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)