ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ERD2_ARATH (P35402) ER lumen protein retaining receptor (HDEL re... 129 2e-30
2ERD2_PETHY (Q9ZTN2) ER lumen protein retaining receptor (HDEL re... 116 1e-26
3ERD2_DROME (O76767) ER lumen protein retaining receptor 100 1e-21
4ERD21_MOUSE (Q99JH8) ER lumen protein retaining receptor 1 (KDEL... 99 2e-21
5ERD21_HUMAN (P24390) ER lumen protein retaining receptor 1 (KDEL... 99 2e-21
6ERD21_BOVIN (P33946) ER lumen protein retaining receptor 1 (KDEL... 99 2e-21
7ERD22_CAEEL (Q09473) Putative ER lumen protein retaining recepto... 90 1e-18
8ERD23_MOUSE (Q8R1L4) ER lumen protein retaining receptor 3 (KDEL... 89 2e-18
9ERD22_RAT (Q5U305) ER lumen protein retaining receptor 2 (KDEL r... 89 3e-18
10ERD22_MOUSE (Q9CQM2) ER lumen protein retaining receptor 2 (KDEL... 89 3e-18
11ERD2_XENLA (O42580) ER lumen protein retaining receptor (KDEL re... 89 4e-18
12ERD22_HUMAN (P33947) ER lumen protein retaining receptor 2 (KDEL... 88 5e-18
13ERD23_HUMAN (O43731) ER lumen protein retaining receptor 3 (KDEL... 87 1e-17
14ERD2_PLAFA (P33948) ER lumen protein retaining receptor 86 3e-17
15ERD2_PLAF7 (Q76NM1) ER lumen protein retaining receptor 86 3e-17
16ERD2_CAEEL (P48583) ER lumen protein retaining receptor 84 7e-17
17ERD2_KLULA (P18413) ER lumen protein retaining receptor 80 1e-15
18ERD2_ENTHI (O44017) ER lumen protein retaining receptor 79 4e-15
19ERD2_YEAST (P18414) ER lumen protein retaining receptor (HDEL re... 75 4e-14
20ERD2_SCHPO (O94270) ER lumen protein retaining receptor 65 3e-11
21BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associa... 32 0.54
22BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-assoc... 31 0.71
23PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9 30 1.2
24BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-assoc... 30 1.6
25RIF1_YEAST (P29539) Protein RIF1 (RAP1-interacting factor 1) 30 2.1
26DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polype... 29 2.7
27LIPA3_RAT (Q91Z79) Liprin-alpha-3 (Protein tyrosine phosphatase ... 28 7.8

>ERD2_ARATH (P35402) ER lumen protein retaining receptor (HDEL receptor)|
          Length = 215

 Score =  129 bits (323), Expect = 2e-30
 Identities = 62/86 (72%), Positives = 71/86 (82%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FRF GDM+HL SV++LLLKIYA KSC+G+S KTQELY  VF+ RYLDLFTD +SLYN
Sbjct: 1   MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN 60

Query: 214 SVMKIVFITTSAAXVWYMRRXPQVRR 291
           S+MKIVFI +S A VW MRR P VRR
Sbjct: 61  SIMKIVFIASSLAIVWCMRRHPLVRR 86



to top

>ERD2_PETHY (Q9ZTN2) ER lumen protein retaining receptor (HDEL receptor)|
           (PGP169-12)
          Length = 215

 Score =  116 bits (291), Expect = 1e-26
 Identities = 58/86 (67%), Positives = 67/86 (77%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR  GDMTHL SV+VLLLKI+  KSC+GVS KTQELY  VFV RYLD+FTD ISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYN 60

Query: 214 SVMKIVFITTSAAXVWYMRRXPQVRR 291
           + MK+VF+ +S + VWYMR    VRR
Sbjct: 61  TTMKLVFLGSSLSIVWYMRHHKIVRR 86



to top

>ERD2_DROME (O76767) ER lumen protein retaining receptor|
          Length = 212

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/78 (56%), Positives = 63/78 (80%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FRF GD++H+F++I+LLLKI+  +SC+G+S K+Q L+  V++ RYLDLFT  +SLYN
Sbjct: 1   MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN 60

Query: 214 SVMKIVFITTSAAXVWYM 267
           SVMK++F+ TS A V+ M
Sbjct: 61  SVMKVLFLATSGATVYLM 78



to top

>ERD21_MOUSE (Q99JH8) ER lumen protein retaining receptor 1 (KDEL receptor 1)|
           (KDEL endoplasmic reticulum protein retention receptor
           1)
          Length = 212

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 45/76 (59%), Positives = 61/76 (80%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FRFLGD++HL ++I+LLLKI+ ++SC+G+S K+Q L+  VF ARYLDLFT+ ISLYN
Sbjct: 1   MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60

Query: 214 SVMKIVFITTSAAXVW 261
           + MK+V+I  S   VW
Sbjct: 61  TCMKVVYIACSFTTVW 76



to top

>ERD21_HUMAN (P24390) ER lumen protein retaining receptor 1 (KDEL receptor 1)|
           (KDEL endoplasmic reticulum protein retention receptor
           1)
          Length = 212

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 45/76 (59%), Positives = 61/76 (80%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FRFLGD++HL ++I+LLLKI+ ++SC+G+S K+Q L+  VF ARYLDLFT+ ISLYN
Sbjct: 1   MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60

Query: 214 SVMKIVFITTSAAXVW 261
           + MK+V+I  S   VW
Sbjct: 61  TCMKVVYIACSFTTVW 76



to top

>ERD21_BOVIN (P33946) ER lumen protein retaining receptor 1 (KDEL receptor 1)|
           (KDEL endoplasmic reticulum protein retention receptor
           1)
          Length = 212

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 45/76 (59%), Positives = 61/76 (80%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FRFLGD++HL ++I+LLLKI+ ++SC+G+S K+Q L+  VF ARYLDLFT+ ISLYN
Sbjct: 1   MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60

Query: 214 SVMKIVFITTSAAXVW 261
           + MK+V+I  S   VW
Sbjct: 61  TCMKVVYIACSFTTVW 76



to top

>ERD22_CAEEL (Q09473) Putative ER lumen protein retaining receptor C28H8.4|
          Length = 213

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 42/78 (53%), Positives = 58/78 (74%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR   DM+HL ++I+LLLKI+ ++SCSG+S ++Q L+  VF ARYLDLF+  ISLYN
Sbjct: 1   MNIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYN 60

Query: 214 SVMKIVFITTSAAXVWYM 267
           + MKI F+  + A V+ M
Sbjct: 61  TTMKITFLAATYATVYLM 78



to top

>ERD23_MOUSE (Q8R1L4) ER lumen protein retaining receptor 3 (KDEL receptor 3)|
           (KDEL endoplasmic reticulum protein retention receptor
           3)
          Length = 214

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 40/76 (52%), Positives = 60/76 (78%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR LGD++HL ++I+LL+KI+ +KSC+G+S K+Q L+  VF  RYLDLF++ IS+YN
Sbjct: 1   MNVFRILGDLSHLLAMILLLVKIWRSKSCAGISGKSQILFALVFTTRYLDLFSNFISIYN 60

Query: 214 SVMKIVFITTSAAXVW 261
           +VMK+VF+  +   V+
Sbjct: 61  TVMKVVFLLCAYVTVY 76



to top

>ERD22_RAT (Q5U305) ER lumen protein retaining receptor 2 (KDEL receptor 2)|
           (KDEL endoplasmic reticulum protein retention receptor
           2)
          Length = 212

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 42/81 (51%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR  GD++HL ++++LLLKI+  +SC+G+S K+Q L+  VF  RYLDLFT  ISLYN
Sbjct: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query: 214 SVMKIVFITTSAAXVW--YMR 270
           + MK+++I  S A V+  YM+
Sbjct: 61  TSMKLIYIACSYATVYLIYMK 81



to top

>ERD22_MOUSE (Q9CQM2) ER lumen protein retaining receptor 2 (KDEL receptor 2)|
           (KDEL endoplasmic reticulum protein retention receptor
           2)
          Length = 212

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 42/81 (51%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR  GD++HL ++++LLLKI+  +SC+G+S K+Q L+  VF  RYLDLFT  ISLYN
Sbjct: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query: 214 SVMKIVFITTSAAXVW--YMR 270
           + MK+++I  S A V+  YM+
Sbjct: 61  TSMKLIYIACSYATVYLIYMK 81



to top

>ERD2_XENLA (O42580) ER lumen protein retaining receptor (KDEL receptor) (KDEL|
           endoplasmic reticulum protein retention receptor)
          Length = 214

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 41/76 (53%), Positives = 58/76 (76%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR LGD++HL ++I+LLLK++ +KSC+G+S K+Q L+  VF  RYLDLFT  IS YN
Sbjct: 1   MNIFRILGDVSHLLAIIILLLKMWKSKSCAGISGKSQLLFALVFTTRYLDLFTVFISPYN 60

Query: 214 SVMKIVFITTSAAXVW 261
           +VMKI+F+  +   V+
Sbjct: 61  TVMKIIFLACAYVTVY 76



to top

>ERD22_HUMAN (P33947) ER lumen protein retaining receptor 2 (KDEL receptor 2)|
           (KDEL endoplasmic reticulum protein retention receptor
           2) (ERD2-like protein 1) (ELP-1)
          Length = 212

 Score = 88.2 bits (217), Expect = 5e-18
 Identities = 39/76 (51%), Positives = 57/76 (75%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR  GD++HL ++++LLLKI+  +SC+G+S K+Q L+  VF  RYLDLFT  ISLYN
Sbjct: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query: 214 SVMKIVFITTSAAXVW 261
           + MK++++  S A V+
Sbjct: 61  TSMKVIYLACSYATVY 76



to top

>ERD23_HUMAN (O43731) ER lumen protein retaining receptor 3 (KDEL receptor 3)|
           (KDEL endoplasmic reticulum protein retention receptor
           3)
          Length = 214

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 40/76 (52%), Positives = 57/76 (75%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR LGD++HL ++I+LL KI+ +K C G+S K+Q L+  VF  RYLDLFT+ IS+YN
Sbjct: 1   MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYN 60

Query: 214 SVMKIVFITTSAAXVW 261
           +VMK+VF+  +   V+
Sbjct: 61  TVMKVVFLLCAYVTVY 76



to top

>ERD2_PLAFA (P33948) ER lumen protein retaining receptor|
          Length = 221

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 39/79 (49%), Positives = 57/79 (72%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR +GD+ HL S+ +L++K+  +K+C G+S + QELYL VF+ RY+DLF   +S YN
Sbjct: 1   MNIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVSFYN 60

Query: 214 SVMKIVFITTSAAXVWYMR 270
           +VMKI FI T A  ++ +R
Sbjct: 61  TVMKITFILTIAYTIYLIR 79



to top

>ERD2_PLAF7 (Q76NM1) ER lumen protein retaining receptor|
          Length = 221

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 39/79 (49%), Positives = 57/79 (72%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FR +GD+ HL S+ +L++K+  +K+C G+S + QELYL VF+ RY+DLF   +S YN
Sbjct: 1   MNIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVSFYN 60

Query: 214 SVMKIVFITTSAAXVWYMR 270
           +VMKI FI T A  ++ +R
Sbjct: 61  TVMKITFILTIAYTIYLIR 79



to top

>ERD2_CAEEL (P48583) ER lumen protein retaining receptor|
          Length = 213

 Score = 84.3 bits (207), Expect = 7e-17
 Identities = 38/78 (48%), Positives = 54/78 (69%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           MN FRF  D+ H  +++VLLLKI+ ++SC G+S ++Q L+  VFV RYLDLFT+  S YN
Sbjct: 1   MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYN 60

Query: 214 SVMKIVFITTSAAXVWYM 267
           + MKI ++  S   V+ M
Sbjct: 61  TAMKIFYLVASFGTVYLM 78



to top

>ERD2_KLULA (P18413) ER lumen protein retaining receptor|
          Length = 219

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 40/80 (50%), Positives = 54/80 (67%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           +N FR  GD +HL S+I+L+  I  + S  G+S KTQ LY  VF+ RYL+LFT   SLYN
Sbjct: 2   LNVFRIAGDFSHLASIIILIQSITTSNSVDGISLKTQLLYTLVFITRYLNLFTKWTSLYN 61

Query: 214 SVMKIVFITTSAAXVWYMRR 273
            +MKIVFI++S   +  MR+
Sbjct: 62  FLMKIVFISSSVYVIVLMRQ 81



to top

>ERD2_ENTHI (O44017) ER lumen protein retaining receptor|
          Length = 215

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 35/79 (44%), Positives = 56/79 (70%)
 Frame = +1

Query: 37  NAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYNS 216
           N FR   D+ HL S+  LL KI ++K+C G+S ++Q L+  V+V RYLD+F +  SLYN+
Sbjct: 4   NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNT 63

Query: 217 VMKIVFITTSAAXVWYMRR 273
           ++KIV++TTSA  ++ + +
Sbjct: 64  ILKIVYLTTSAYTIYLISK 82



to top

>ERD2_YEAST (P18414) ER lumen protein retaining receptor (HDEL receptor)|
          Length = 219

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDD-ISLY 210
           MN FR LGD++HL S+++L+  I   +   G+S KTQ LY  VF+ RYLDL T   +SLY
Sbjct: 1   MNPFRILGDLSHLTSILILIHNIKTTRYIEGISFKTQTLYALVFITRYLDLLTFHWVSLY 60

Query: 211 NSVMKIVFITTSAAXV 258
           N++MKI FI ++A  V
Sbjct: 61  NALMKIFFIVSTAYIV 76



to top

>ERD2_SCHPO (O94270) ER lumen protein retaining receptor|
          Length = 212

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 34/78 (43%), Positives = 51/78 (65%)
 Frame = +1

Query: 34  MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213
           M  F  LGDM HL ++ +LL ++  +K+CSG+S K+  L+L V+V RYL+LF    SLY 
Sbjct: 1   MTFFSALGDMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTRYLNLFWRYKSLYY 60

Query: 214 SVMKIVFITTSAAXVWYM 267
            +M+IVFI + +   + M
Sbjct: 61  FLMRIVFIASESYICYLM 78



to top

>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1096

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +3

Query: 45  PVPGGHDPPLLGH----RPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPGP 185
           P PG   PP   H    R   Q +   V++    +D+GA PGGV  A  GP
Sbjct: 423 PPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGAQPGGVPSAPTGP 473



to top

>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +3

Query: 45  PVPGGHDPPLLGH----RPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPGP 185
           P PG   PP   H    R   Q +   V++    +D+GA PGGV  A  GP
Sbjct: 429 PPPGPAPPPASSHPRVIRISHQSVEPVVMMHMNIQDSGAQPGGVPSAPTGP 479



to top

>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9|
          Length = 736

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +3

Query: 45  PVPGGHDPPLLGHRPPPQDLRQQVLLRGVEEDA-----GAVPGGVRRAVPGP 185
           P  GG+ PP+ G  PPP     Q   RG   +A     G  P G R+  PGP
Sbjct: 366 PPRGGYGPPMRGRAPPP---GYQYDRRGSPAEAYGPPPGQGPYGQRQQSPGP 414



to top

>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3) (Protein G3)
          Length = 1132

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = +3

Query: 45  PVPGGHDPPLLGH----RPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPGP 185
           P PG   PP   H    R   Q +   V++    +D+G  PGGV  A  GP
Sbjct: 428 PPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGP 478



to top

>RIF1_YEAST (P29539) Protein RIF1 (RAP1-interacting factor 1)|
          Length = 1916

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 58  DMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLF--TDDISLYNSVMKI 228
           D THL S   L+LK+  N   + + R       + FV  +LDLF   +D SL N  ++I
Sbjct: 760 DQTHLESFSSLILKVTQNNKDTPIFRDFFGAVTSSFVYTFLDLFLRKNDSSLVNFNIQI 818



to top

>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)|
            (DAP-150) (p150-glued) (p135)
          Length = 1278

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 87   PPPQDLRQQVL-LRGVEEDAGAVPGGVRRAVPGP 185
            PPP  +   V  + G E+  GA+PG    +VPGP
Sbjct: 1051 PPPSGIATLVSGIAGEEQQRGAIPGQAPGSVPGP 1084



to top

>LIPA3_RAT (Q91Z79) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1192

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +3

Query: 45  PVPGGHDPPLLGHRPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPG 182
           P   GH  P L    PP   R+      V +D   VP G   A+PG
Sbjct: 668 PPSSGHSTPRLA---PPSPARETDKTNHVPKDEAGVPRGEGPAIPG 710


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,255,611
Number of Sequences: 219361
Number of extensions: 383320
Number of successful extensions: 1410
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top