Clone Name | bart09b09 |
---|---|
Clone Library Name | barley_pub |
>ERD2_ARATH (P35402) ER lumen protein retaining receptor (HDEL receptor)| Length = 215 Score = 129 bits (323), Expect = 2e-30 Identities = 62/86 (72%), Positives = 71/86 (82%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FRF GDM+HL SV++LLLKIYA KSC+G+S KTQELY VF+ RYLDLFTD +SLYN Sbjct: 1 MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN 60 Query: 214 SVMKIVFITTSAAXVWYMRRXPQVRR 291 S+MKIVFI +S A VW MRR P VRR Sbjct: 61 SIMKIVFIASSLAIVWCMRRHPLVRR 86
>ERD2_PETHY (Q9ZTN2) ER lumen protein retaining receptor (HDEL receptor)| (PGP169-12) Length = 215 Score = 116 bits (291), Expect = 1e-26 Identities = 58/86 (67%), Positives = 67/86 (77%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR GDMTHL SV+VLLLKI+ KSC+GVS KTQELY VFV RYLD+FTD ISLYN Sbjct: 1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYN 60 Query: 214 SVMKIVFITTSAAXVWYMRRXPQVRR 291 + MK+VF+ +S + VWYMR VRR Sbjct: 61 TTMKLVFLGSSLSIVWYMRHHKIVRR 86
>ERD2_DROME (O76767) ER lumen protein retaining receptor| Length = 212 Score = 100 bits (248), Expect = 1e-21 Identities = 44/78 (56%), Positives = 63/78 (80%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FRF GD++H+F++I+LLLKI+ +SC+G+S K+Q L+ V++ RYLDLFT +SLYN Sbjct: 1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN 60 Query: 214 SVMKIVFITTSAAXVWYM 267 SVMK++F+ TS A V+ M Sbjct: 61 SVMKVLFLATSGATVYLM 78
>ERD21_MOUSE (Q99JH8) ER lumen protein retaining receptor 1 (KDEL receptor 1)| (KDEL endoplasmic reticulum protein retention receptor 1) Length = 212 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/76 (59%), Positives = 61/76 (80%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FRFLGD++HL ++I+LLLKI+ ++SC+G+S K+Q L+ VF ARYLDLFT+ ISLYN Sbjct: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60 Query: 214 SVMKIVFITTSAAXVW 261 + MK+V+I S VW Sbjct: 61 TCMKVVYIACSFTTVW 76
>ERD21_HUMAN (P24390) ER lumen protein retaining receptor 1 (KDEL receptor 1)| (KDEL endoplasmic reticulum protein retention receptor 1) Length = 212 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/76 (59%), Positives = 61/76 (80%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FRFLGD++HL ++I+LLLKI+ ++SC+G+S K+Q L+ VF ARYLDLFT+ ISLYN Sbjct: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60 Query: 214 SVMKIVFITTSAAXVW 261 + MK+V+I S VW Sbjct: 61 TCMKVVYIACSFTTVW 76
>ERD21_BOVIN (P33946) ER lumen protein retaining receptor 1 (KDEL receptor 1)| (KDEL endoplasmic reticulum protein retention receptor 1) Length = 212 Score = 99.4 bits (246), Expect = 2e-21 Identities = 45/76 (59%), Positives = 61/76 (80%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FRFLGD++HL ++I+LLLKI+ ++SC+G+S K+Q L+ VF ARYLDLFT+ ISLYN Sbjct: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60 Query: 214 SVMKIVFITTSAAXVW 261 + MK+V+I S VW Sbjct: 61 TCMKVVYIACSFTTVW 76
>ERD22_CAEEL (Q09473) Putative ER lumen protein retaining receptor C28H8.4| Length = 213 Score = 90.1 bits (222), Expect = 1e-18 Identities = 42/78 (53%), Positives = 58/78 (74%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR DM+HL ++I+LLLKI+ ++SCSG+S ++Q L+ VF ARYLDLF+ ISLYN Sbjct: 1 MNIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYN 60 Query: 214 SVMKIVFITTSAAXVWYM 267 + MKI F+ + A V+ M Sbjct: 61 TTMKITFLAATYATVYLM 78
>ERD23_MOUSE (Q8R1L4) ER lumen protein retaining receptor 3 (KDEL receptor 3)| (KDEL endoplasmic reticulum protein retention receptor 3) Length = 214 Score = 89.4 bits (220), Expect = 2e-18 Identities = 40/76 (52%), Positives = 60/76 (78%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR LGD++HL ++I+LL+KI+ +KSC+G+S K+Q L+ VF RYLDLF++ IS+YN Sbjct: 1 MNVFRILGDLSHLLAMILLLVKIWRSKSCAGISGKSQILFALVFTTRYLDLFSNFISIYN 60 Query: 214 SVMKIVFITTSAAXVW 261 +VMK+VF+ + V+ Sbjct: 61 TVMKVVFLLCAYVTVY 76
>ERD22_RAT (Q5U305) ER lumen protein retaining receptor 2 (KDEL receptor 2)| (KDEL endoplasmic reticulum protein retention receptor 2) Length = 212 Score = 89.0 bits (219), Expect = 3e-18 Identities = 42/81 (51%), Positives = 60/81 (74%), Gaps = 2/81 (2%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR GD++HL ++++LLLKI+ +SC+G+S K+Q L+ VF RYLDLFT ISLYN Sbjct: 1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60 Query: 214 SVMKIVFITTSAAXVW--YMR 270 + MK+++I S A V+ YM+ Sbjct: 61 TSMKLIYIACSYATVYLIYMK 81
>ERD22_MOUSE (Q9CQM2) ER lumen protein retaining receptor 2 (KDEL receptor 2)| (KDEL endoplasmic reticulum protein retention receptor 2) Length = 212 Score = 89.0 bits (219), Expect = 3e-18 Identities = 42/81 (51%), Positives = 60/81 (74%), Gaps = 2/81 (2%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR GD++HL ++++LLLKI+ +SC+G+S K+Q L+ VF RYLDLFT ISLYN Sbjct: 1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60 Query: 214 SVMKIVFITTSAAXVW--YMR 270 + MK+++I S A V+ YM+ Sbjct: 61 TSMKLIYIACSYATVYLIYMK 81
>ERD2_XENLA (O42580) ER lumen protein retaining receptor (KDEL receptor) (KDEL| endoplasmic reticulum protein retention receptor) Length = 214 Score = 88.6 bits (218), Expect = 4e-18 Identities = 41/76 (53%), Positives = 58/76 (76%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR LGD++HL ++I+LLLK++ +KSC+G+S K+Q L+ VF RYLDLFT IS YN Sbjct: 1 MNIFRILGDVSHLLAIIILLLKMWKSKSCAGISGKSQLLFALVFTTRYLDLFTVFISPYN 60 Query: 214 SVMKIVFITTSAAXVW 261 +VMKI+F+ + V+ Sbjct: 61 TVMKIIFLACAYVTVY 76
>ERD22_HUMAN (P33947) ER lumen protein retaining receptor 2 (KDEL receptor 2)| (KDEL endoplasmic reticulum protein retention receptor 2) (ERD2-like protein 1) (ELP-1) Length = 212 Score = 88.2 bits (217), Expect = 5e-18 Identities = 39/76 (51%), Positives = 57/76 (75%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR GD++HL ++++LLLKI+ +SC+G+S K+Q L+ VF RYLDLFT ISLYN Sbjct: 1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60 Query: 214 SVMKIVFITTSAAXVW 261 + MK++++ S A V+ Sbjct: 61 TSMKVIYLACSYATVY 76
>ERD23_HUMAN (O43731) ER lumen protein retaining receptor 3 (KDEL receptor 3)| (KDEL endoplasmic reticulum protein retention receptor 3) Length = 214 Score = 86.7 bits (213), Expect = 1e-17 Identities = 40/76 (52%), Positives = 57/76 (75%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR LGD++HL ++I+LL KI+ +K C G+S K+Q L+ VF RYLDLFT+ IS+YN Sbjct: 1 MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYN 60 Query: 214 SVMKIVFITTSAAXVW 261 +VMK+VF+ + V+ Sbjct: 61 TVMKVVFLLCAYVTVY 76
>ERD2_PLAFA (P33948) ER lumen protein retaining receptor| Length = 221 Score = 85.5 bits (210), Expect = 3e-17 Identities = 39/79 (49%), Positives = 57/79 (72%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR +GD+ HL S+ +L++K+ +K+C G+S + QELYL VF+ RY+DLF +S YN Sbjct: 1 MNIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVSFYN 60 Query: 214 SVMKIVFITTSAAXVWYMR 270 +VMKI FI T A ++ +R Sbjct: 61 TVMKITFILTIAYTIYLIR 79
>ERD2_PLAF7 (Q76NM1) ER lumen protein retaining receptor| Length = 221 Score = 85.5 bits (210), Expect = 3e-17 Identities = 39/79 (49%), Positives = 57/79 (72%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FR +GD+ HL S+ +L++K+ +K+C G+S + QELYL VF+ RY+DLF +S YN Sbjct: 1 MNIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVSFYN 60 Query: 214 SVMKIVFITTSAAXVWYMR 270 +VMKI FI T A ++ +R Sbjct: 61 TVMKITFILTIAYTIYLIR 79
>ERD2_CAEEL (P48583) ER lumen protein retaining receptor| Length = 213 Score = 84.3 bits (207), Expect = 7e-17 Identities = 38/78 (48%), Positives = 54/78 (69%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 MN FRF D+ H +++VLLLKI+ ++SC G+S ++Q L+ VFV RYLDLFT+ S YN Sbjct: 1 MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYN 60 Query: 214 SVMKIVFITTSAAXVWYM 267 + MKI ++ S V+ M Sbjct: 61 TAMKIFYLVASFGTVYLM 78
>ERD2_KLULA (P18413) ER lumen protein retaining receptor| Length = 219 Score = 80.5 bits (197), Expect = 1e-15 Identities = 40/80 (50%), Positives = 54/80 (67%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 +N FR GD +HL S+I+L+ I + S G+S KTQ LY VF+ RYL+LFT SLYN Sbjct: 2 LNVFRIAGDFSHLASIIILIQSITTSNSVDGISLKTQLLYTLVFITRYLNLFTKWTSLYN 61 Query: 214 SVMKIVFITTSAAXVWYMRR 273 +MKIVFI++S + MR+ Sbjct: 62 FLMKIVFISSSVYVIVLMRQ 81
>ERD2_ENTHI (O44017) ER lumen protein retaining receptor| Length = 215 Score = 78.6 bits (192), Expect = 4e-15 Identities = 35/79 (44%), Positives = 56/79 (70%) Frame = +1 Query: 37 NAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYNS 216 N FR D+ HL S+ LL KI ++K+C G+S ++Q L+ V+V RYLD+F + SLYN+ Sbjct: 4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNT 63 Query: 217 VMKIVFITTSAAXVWYMRR 273 ++KIV++TTSA ++ + + Sbjct: 64 ILKIVYLTTSAYTIYLISK 82
>ERD2_YEAST (P18414) ER lumen protein retaining receptor (HDEL receptor)| Length = 219 Score = 75.1 bits (183), Expect = 4e-14 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDD-ISLY 210 MN FR LGD++HL S+++L+ I + G+S KTQ LY VF+ RYLDL T +SLY Sbjct: 1 MNPFRILGDLSHLTSILILIHNIKTTRYIEGISFKTQTLYALVFITRYLDLLTFHWVSLY 60 Query: 211 NSVMKIVFITTSAAXV 258 N++MKI FI ++A V Sbjct: 61 NALMKIFFIVSTAYIV 76
>ERD2_SCHPO (O94270) ER lumen protein retaining receptor| Length = 212 Score = 65.5 bits (158), Expect = 3e-11 Identities = 34/78 (43%), Positives = 51/78 (65%) Frame = +1 Query: 34 MNAFRFLGDMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLFTDDISLYN 213 M F LGDM HL ++ +LL ++ +K+CSG+S K+ L+L V+V RYL+LF SLY Sbjct: 1 MTFFSALGDMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTRYLNLFWRYKSLYY 60 Query: 214 SVMKIVFITTSAAXVWYM 267 +M+IVFI + + + M Sbjct: 61 FLMRIVFIASESYICYLM 78
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 31.6 bits (70), Expect = 0.54 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = +3 Query: 45 PVPGGHDPPLLGH----RPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPGP 185 P PG PP H R Q + V++ +D+GA PGGV A GP Sbjct: 423 PPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGAQPGGVPSAPTGP 473
>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1154 Score = 31.2 bits (69), Expect = 0.71 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = +3 Query: 45 PVPGGHDPPLLGH----RPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPGP 185 P PG PP H R Q + V++ +D+GA PGGV A GP Sbjct: 429 PPPGPAPPPASSHPRVIRISHQSVEPVVMMHMNIQDSGAQPGGVPSAPTGP 479
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = +3 Query: 45 PVPGGHDPPLLGHRPPPQDLRQQVLLRGVEEDA-----GAVPGGVRRAVPGP 185 P GG+ PP+ G PPP Q RG +A G P G R+ PGP Sbjct: 366 PPRGGYGPPMRGRAPPP---GYQYDRRGSPAEAYGPPPGQGPYGQRQQSPGP 414
>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) (Protein G3) Length = 1132 Score = 30.0 bits (66), Expect = 1.6 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = +3 Query: 45 PVPGGHDPPLLGH----RPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPGP 185 P PG PP H R Q + V++ +D+G PGGV A GP Sbjct: 428 PPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGP 478
>RIF1_YEAST (P29539) Protein RIF1 (RAP1-interacting factor 1)| Length = 1916 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +1 Query: 58 DMTHLFSVIVLLLKIYANKSCSGVSRKTQELYLAVFVARYLDLF--TDDISLYNSVMKI 228 D THL S L+LK+ N + + R + FV +LDLF +D SL N ++I Sbjct: 760 DQTHLESFSSLILKVTQNNKDTPIFRDFFGAVTSSFVYTFLDLFLRKNDSSLVNFNIQI 818
>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)| (DAP-150) (p150-glued) (p135) Length = 1278 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +3 Query: 87 PPPQDLRQQVL-LRGVEEDAGAVPGGVRRAVPGP 185 PPP + V + G E+ GA+PG +VPGP Sbjct: 1051 PPPSGIATLVSGIAGEEQQRGAIPGQAPGSVPGP 1084
>LIPA3_RAT (Q91Z79) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3) Length = 1192 Score = 27.7 bits (60), Expect = 7.8 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +3 Query: 45 PVPGGHDPPLLGHRPPPQDLRQQVLLRGVEEDAGAVPGGVRRAVPG 182 P GH P L PP R+ V +D VP G A+PG Sbjct: 668 PPSSGHSTPRLA---PPSPARETDKTNHVPKDEAGVPRGEGPAIPG 710 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,255,611 Number of Sequences: 219361 Number of extensions: 383320 Number of successful extensions: 1410 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1405 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)